Cla001781 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001781
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Beta-galactosidase (AHRD V1 ***- D7M042_ARALL); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35
Location	Chr3 : 21431617 .. 21432048 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAAACTTCAATGGCTTGTTCTTCCCCTCGTTGCAGCTTTAGCTTCCTTTTCCTTTTGTACAGGAGACAATGTCTCCTATGATTCAAATGCCATAATTATCAATGGTGAACGACGCGTTATTTTCTCAGGATCAATTCACTATCCACGCAGCACCAACGCAATGTGGCCTGATCTTATTCAAAAGGCTAAAGATGGTGGACTGGATGCAATCGAGACATACATTTTTTGGGATCGCCACGAACCTCAACGGCGAAAATACGATTTCTCTGGACATCTAAATTTTATCAAATTCTTACAGCTTGTTCAAGATGTTGGGCTATATGTCGTGATGAGGATTGGTCCTTACGTGTGTTGTGTGTGCCGAGTGGAACTATGGAGGCTTTCCACTGTGGTTGCACAAGATGCCGGGAATCCAACTTCGAACTGA

mRNA sequence

ATGTTTAAACTTCAATGGCTTGTTCTTCCCCTCGTTGCAGCTTTAGCTTCCTTTTCCTTTTGTACAGGAGACAATGTCTCCTATGATTCAAATGCCATAATTATCAATGGTGAACGACGCGTTATTTTCTCAGGATCAATTCACTATCCACGCAGCACCAACGCAATGTGGCCTGATCTTATTCAAAAGGCTAAAGATGGTGGACTGGATGCAATCGAGACATACATTTTTTGGGATCGCCACGAACCTCAACGGCGAAAATACGATTTCTCTGGACATCTAAATTTTATCAAATTCTTACAGCTTGTTCAAGATGTTGGGCTATATGTCGTGATGAGGATTGGTCCTTACGTGTGTTGTGTGTGCCGAGTGGAACTATGGAGGCTTTCCACTGTGGTTGCACAAGATGCCGGGAATCCAACTTCGAACTGA

Coding sequence (CDS)

ATGTTTAAACTTCAATGGCTTGTTCTTCCCCTCGTTGCAGCTTTAGCTTCCTTTTCCTTTTGTACAGGAGACAATGTCTCCTATGATTCAAATGCCATAATTATCAATGGTGAACGACGCGTTATTTTCTCAGGATCAATTCACTATCCACGCAGCACCAACGCAATGTGGCCTGATCTTATTCAAAAGGCTAAAGATGGTGGACTGGATGCAATCGAGACATACATTTTTTGGGATCGCCACGAACCTCAACGGCGAAAATACGATTTCTCTGGACATCTAAATTTTATCAAATTCTTACAGCTTGTTCAAGATGTTGGGCTATATGTCGTGATGAGGATTGGTCCTTACGTGTGTTGTGTGTGCCGAGTGGAACTATGGAGGCTTTCCACTGTGGTTGCACAAGATGCCGGGAATCCAACTTCGAACTGA

Protein sequence

MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVCCVCRVELWRLSTVVAQDAGNPTSN

Homology

[Close]

BLAST of Cla001781 vs. Swiss-Prot
Match: BGAL7_ARATH (Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 6.9e-37
Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 1


Query: 15  LASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAKDGGLDAIET 74
           + S S      VS+D  AI ING+RR++ SGSIHYPRST  MWPDLI KAKDGGLDAIET
Sbjct: 17  ITSLSLAKSTIVSHDERAITINGKRRILLSGSIHYPRSTADMWPDLINKAKDGGLDAIET 76

Query: 75  YIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           Y+FW+ HEP+RR+YDFSG+L+ ++F++ +QD GLY V+RIGPYVC
Sbjct: 77  YVFWNAHEPKRREYDFSGNLDVVRFIKTIQDAGLYSVLRIGPYVC 121

[Close]

BLAST of Cla001781 vs. Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-35
Identity = 65/105 (61.90%), Postives = 81/105 (77.14%), Query Frame = 1


Query: 15  LASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAKDGGLDAIET 74
           + SF       VS+D  AI I+G+RR++ SGSIHYPRST+ MWPDLI KAKDGGLD IET
Sbjct: 16  ITSFGSANSTIVSHDERAITIDGQRRILLSGSIHYPRSTSDMWPDLISKAKDGGLDTIET 75

Query: 75  YIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           Y+FW+ HEP RR+YDFSG+L+ ++F++ +Q  GLY V+RIGPYVC
Sbjct: 76  YVFWNAHEPSRRQYDFSGNLDLVRFIKTIQSAGLYSVLRIGPYVC 120

[Close]

BLAST of Cla001781 vs. Swiss-Prot
Match: BGAL1_ORYSJ (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.9e-35
Identity = 64/114 (56.14%), Postives = 89/114 (78.07%), Query Frame = 1


Query: 6   WLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAK 65
           W+ L ++A  A    CT  +VSYD  +++I+G+RR+I SGSIHYPRST  MWPDLI+KAK
Sbjct: 13  WVALLVLAVAADAVGCT--SVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAK 72

Query: 66  DGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           +GGLDAIETYIFW+ HEP RR+Y+F G+ + ++F + +Q+ G+Y ++RIGPY+C
Sbjct: 73  EGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYIC 124

[Close]

BLAST of Cla001781 vs. Swiss-Prot
Match: BGA10_ORYSJ (Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.5e-35
Identity = 64/113 (56.64%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 7   LVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAKD 66
           LV  LV  LA  +   G  V+Y+  +++I+GERR+I SGSIHYPRST  MWPDLI+KAK+
Sbjct: 12  LVALLVVVLAEAAGVGGTTVTYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKE 71

Query: 67  GGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           GGLDAIETY+FW+ HEP RR+Y+F G+ + ++F + +Q+ GLY ++RIGPY+C
Sbjct: 72  GGLDAIETYVFWNGHEPHRRQYNFVGNYDIVRFFKEIQNAGLYAILRIGPYIC 124

[Close]

BLAST of Cla001781 vs. Swiss-Prot
Match: BGA13_ORYSJ (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.2e-34
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 7   LVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAKD 66
           LV  LV  LA  +      V+Y+  +++I+GERR+I SGSIHYPRST  MWPDLI+KAK+
Sbjct: 12  LVALLVVVLAEAAGVGCTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKE 71

Query: 67  GGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           GGLDAIETY+FW+ HEP RR+Y+F G+ + I+F + +Q+ GLY ++RIGPY+C
Sbjct: 72  GGLDAIETYVFWNGHEPHRRQYNFEGNYDIIRFFKEIQNAGLYAILRIGPYIC 124

[Close]

BLAST of Cla001781 vs. TrEMBL
Match: A0A0A0LDH9_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-53
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 1   MFKL-QWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPD 60
           MFKL QWL+L L A LA  SFC G+NVSYDSNAIIINGERR+IFSGSIHYPRST  MWPD
Sbjct: 1   MFKLFQWLLLDLAATLACLSFCIGNNVSYDSNAIIINGERRIIFSGSIHYPRSTEEMWPD 60

Query: 61  LIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           LIQKAKDGGLDAIETYIFWDRHEP RRKYDFSGHLNFIK+ QL+Q+ GLYVVMRIGPYVC
Sbjct: 61  LIQKAKDGGLDAIETYIFWDRHEPHRRKYDFSGHLNFIKYFQLIQEAGLYVVMRIGPYVC 120

[Close]

BLAST of Cla001781 vs. TrEMBL
Match: A0A0A0KRM6_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-51
Identity = 100/119 (84.03%), Postives = 104/119 (87.39%), Query Frame = 1


Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDL 60
           MFKLQW V      LA  +FC  DNVSYDSNAIIINGERR+IFSGSIHYPRST AMWPDL
Sbjct: 1   MFKLQWFV----PTLACLTFCMRDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG L+FIKF QL+QD GLYVVMRIGPYVC
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVC 115

[Close]

BLAST of Cla001781 vs. TrEMBL
Match: A0A0A0M006_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49
Identity = 99/119 (83.19%), Postives = 104/119 (87.39%), Query Frame = 1


Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDL 60
           MFKLQWLV    A LA  +FC GDNVSYDSNA+IINGERR+IFSGSIHYPRST AMWPDL
Sbjct: 1   MFKLQWLV----ATLACLTFCIGDNVSYDSNALIINGERRIIFSGSIHYPRSTEAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           IQKAKDGGLDAIETYIF  R EPQRRKYDFSG L+FIKF QL+QD GLYVVMRIGPYVC
Sbjct: 61  IQKAKDGGLDAIETYIFGARREPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVC 115

[Close]

BLAST of Cla001781 vs. TrEMBL
Match: A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.6e-48
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 23  GDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAKDGGLDAIETYIFWDRHE 82
           GDNVSYDSNAIIINGERRVIFSGSIHYPRST+AMWPDLIQKAKDGGLDAIETYIFWDRHE
Sbjct: 2   GDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIETYIFWDRHE 61

Query: 83  PQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           PQR+KYDFSGHLNFIKF QLVQD GLY+VMRIGPYVC
Sbjct: 62  PQRQKYDFSGHLNFIKFFQLVQDAGLYIVMRIGPYVC 98

[Close]

BLAST of Cla001781 vs. TrEMBL
Match: B9RR67_RICCO (Beta-galactosidase, putative OS=Ricinus communis GN=RCOM_0710610 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-42
Identity = 76/114 (66.67%), Postives = 97/114 (85.09%), Query Frame = 1


Query: 6   WLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDLIQKAK 65
           W+ + L++ LA  S C+   V YDSNA+IINGER++IFSG+IHYPRST  MWP+LI KAK
Sbjct: 5   WIDIVLISTLALLSLCSATTVEYDSNALIINGERKIIFSGAIHYPRSTPEMWPELINKAK 64

Query: 66  DGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           DGGLDAIETY+FWDRHEP RR+YDFSG+L+ +KF +++Q+ GLYV++RIGPYVC
Sbjct: 65  DGGLDAIETYVFWDRHEPVRRQYDFSGNLDIVKFFRVIQEAGLYVILRIGPYVC 118

[Close]

BLAST of Cla001781 vs. NCBI nr
Match: gi|659086605|ref|XP_008444022.1| (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-55
Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 1


Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRST+ MWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDTMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKF QLVQD GLYVVMRIGPYVC
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAGLYVVMRIGPYVC 119

[Close]

BLAST of Cla001781 vs. NCBI nr
Match: gi|659093706|ref|XP_008447673.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 8.1e-54
Identity = 104/120 (86.67%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 1   MFKL-QWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPD 60
           MFKL QWLVL L+  LA  S C GDNVSYDSNAIIINGERR+IFSGSIHYPRST  MWPD
Sbjct: 1   MFKLFQWLVLHLIVTLACLSCCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEEMWPD 60

Query: 61  LIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           LIQKAKDGGLDAIETYIFWDRHEP RRKYDFSGHLNFIKF QL+Q+VGLYVVMRIGPYVC
Sbjct: 61  LIQKAKDGGLDAIETYIFWDRHEPHRRKYDFSGHLNFIKFFQLIQEVGLYVVMRIGPYVC 120

[Close]

BLAST of Cla001781 vs. NCBI nr
Match: gi|778688671|ref|XP_011652808.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 3.1e-53
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 1   MFKL-QWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPD 60
           MFKL QWL+L L A LA  SFC G+NVSYDSNAIIINGERR+IFSGSIHYPRST  MWPD
Sbjct: 1   MFKLFQWLLLDLAATLACLSFCIGNNVSYDSNAIIINGERRIIFSGSIHYPRSTEEMWPD 60

Query: 61  LIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           LIQKAKDGGLDAIETYIFWDRHEP RRKYDFSGHLNFIK+ QL+Q+ GLYVVMRIGPYVC
Sbjct: 61  LIQKAKDGGLDAIETYIFWDRHEPHRRKYDFSGHLNFIKYFQLIQEAGLYVVMRIGPYVC 120

[Close]

BLAST of Cla001781 vs. NCBI nr
Match: gi|700203008|gb|KGN58141.1| (hypothetical protein Csa_3G550690 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 3.1e-53
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 1   MFKL-QWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPD 60
           MFKL QWL+L L A LA  SFC G+NVSYDSNAIIINGERR+IFSGSIHYPRST  MWPD
Sbjct: 1   MFKLFQWLLLDLAATLACLSFCIGNNVSYDSNAIIINGERRIIFSGSIHYPRSTEEMWPD 60

Query: 61  LIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           LIQKAKDGGLDAIETYIFWDRHEP RRKYDFSGHLNFIK+ QL+Q+ GLYVVMRIGPYVC
Sbjct: 61  LIQKAKDGGLDAIETYIFWDRHEPHRRKYDFSGHLNFIKYFQLIQEAGLYVVMRIGPYVC 120

[Close]

BLAST of Cla001781 vs. NCBI nr
Match: gi|659129875|ref|XP_008464891.1| (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 4.0e-53
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1


Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTNAMWPDL 60
           MFKL WLVL L+AALA  SFCTG NV+YDSNAIIINGERR+I SGSIHYPRST  MWPDL
Sbjct: 1   MFKLHWLVLLLIAALACLSFCTGANVTYDSNAIIINGERRIILSGSIHYPRSTENMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFLQLVQDVGLYVVMRIGPYVC 120
           IQKAKDGGLDAIETYIFWDRHEPQ+RKYDFSG+L+FIKF QL+Q+ GLYVVMRIGPYVC
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPQQRKYDFSGNLDFIKFFQLIQNAGLYVVMRIGPYVC 119

The following BLAST results are available for this feature:

BLAST of Cla001781 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BGAL7_ARATH	6.9e-37	64.76	Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2	[more]
BGAL_BRAOL	1.0e-35	61.90	Beta-galactosidase OS=Brassica oleracea PE=2 SV=1	[more]
BGAL1_ORYSJ	2.9e-35	56.14	Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1	[more]
BGA10_ORYSJ	8.5e-35	56.64	Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 P...	[more]
BGA13_ORYSJ	4.2e-34	56.64	Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1	[more]

BLAST of Cla001781 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDH9_CUCSA	2.2e-53	85.00	Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1	[more]
A0A0A0KRM6_CUCSA	2.6e-51	84.03	Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1	[more]
A0A0A0M006_CUCSA	1.1e-49	83.19	Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1	[more]
A0A0A0LXX7_CUCSA	3.6e-48	94.85	Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1	[more]
B9RR67_RICCO	5.0e-42	66.67	Beta-galactosidase, putative OS=Ricinus communis GN=RCOM_0710610 PE=3 SV=1	[more]

BLAST of Cla001781 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086605\|ref\|XP_008444022.1\|	3.3e-55	87.39	PREDICTED: beta-galactosidase-like [Cucumis melo]	[more]
gi\|659093706\|ref\|XP_008447673.1\|	8.1e-54	86.67	PREDICTED: beta-galactosidase 15-like [Cucumis melo]	[more]
gi\|778688671\|ref\|XP_011652808.1\|	3.1e-53	85.00	PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus]	[more]
gi\|700203008\|gb\|KGN58141.1\|	3.1e-53	85.00	hypothetical protein Csa_3G550690 [Cucumis sativus]	[more]
gi\|659129875\|ref\|XP_008464891.1\|	4.0e-53	84.87	PREDICTED: beta-galactosidase-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001944	Glycoside_Hdrlase_35
IPR013781	Glycoside hydrolase, catalytic domain
IPR017853	Glycoside_hydrolase_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006027	glycosaminoglycan catabolic process
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0009341	beta-galactosidase complex
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0032559	adenyl ribonucleotide binding
molecular_function	GO:0043168	anion binding
molecular_function	GO:0032550	purine ribonucleoside binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001781	Cla001781.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001944	Glycoside hydrolase, family 35	PRINTS	PR00742	GLHYDRLASE35	coord: 57..75 score: 4.7E-18coord: 36..53 score: 4.7E-18coord: 112..131 score: 4.7
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 11..119 score: 1.8
IPR013781	Glycoside hydrolase, catalytic domain	GENE3D	G3DSA:3.20.20.80		coord: 23..120 score: 7.1
IPR017853	Glycoside hydrolase superfamily	unknown	SSF51445	(Trans)glycosidases	coord: 23..120 score: 4.27
None	No IPR available	PANTHER	PTHR23421:SF80	SUBFAMILY NOT NAMED	coord: 11..119 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001781	Cla97C03G062000	Watermelon (97103) v2	wmwmbB128
Cla001781	ClCG03G011850	Watermelon (Charleston Gray)	wcgwmB230
Cla001781	CSPI01G31690	Wild cucumber (PI 183967)	cpiwmB018
Cla001781	Cucsa.356120	Cucumber (Gy14) v1	cgywmB639
Cla001781	Lsi06G007380	Bottle gourd (USVL1VR-Ls)	lsiwmB398
Cla001781	MELO3C009997.2	Melon (DHL92) v3.6.1	medwmB260
Cla001781	CsaV3_1G044040	Cucumber (Chinese Long) v3	cucwmB021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001781	Cucurbita maxima (Rimu)	cmawmB054
Cla001781	Cucurbita maxima (Rimu)	cmawmB096
Cla001781	Cucurbita moschata (Rifu)	cmowmB046
Cla001781	Cucurbita moschata (Rifu)	cmowmB086
Cla001781	Watermelon (Charleston Gray)	wcgwmB228
Cla001781	Cucumber (Chinese Long) v2	cuwmB016
Cla001781	Cucurbita pepo (Zucchini)	cpewmB008
Cla001781	Cucurbita pepo (Zucchini)	cpewmB353
Cla001781	Bottle gourd (USVL1VR-Ls)	lsiwmB393
Cla001781	Cucumber (Gy14) v2	cgybwmB018
Cla001781	Silver-seed gourd	carwmB0532
Cla001781	Silver-seed gourd	carwmB0971
Cla001781	Watermelon (97103) v2	wmwmbB129