Cla001713 (gene) Watermelon (97103) v1

Overview
NameCla001713
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTranscription factor (AHRD V1 ***- D6MKE6_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
LocationChr5 : 21689287 .. 21691608 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCCCCCGAAAATCCCAATTGGTTGTTTGATTATGGTTTGATCGACGACATCCCTGTACCGGATGCGAATTTCCCGGTCACGAGTTCAAGCTTCTCCTGGGCTATTCAGCCCTTTAACGGCATCCATGATACCGGGTAATCTTCGGATCTCTCTCAATTATTCTTTCAAGCTTGTTTTTTTTCCTTCCTTGTCCAACCTATATTGGGGAAAATATATTCCCGGATTTTCGTCTTCATGCCGAATTGTGGGAGGTGGGTGGCCCCCTTTCATTGCTGTTCAGATTAACTTTCGGGAGGATTTCTTTTAAGCAAGATTTCAATGTGGTTTTAAACATTTTTGGATTGCGTTAGTAATTGGTTCAGACCTCTGACTAATGACAGAAATATATAGAGATTTTGGGGGAAAATAGTCTGTAGTGGTACTATACTTCTGATTGTGTTTGGTGAACTATCATTTCGTTGACCGAATTGATACGCGGAATAATGTCTAGTAGCTTACTTTCATGGACATGTTGGTACAGCATTTGTGTGTACTTATTTCTTTTTCCTTTGGCATGTTATTCCAGTGTGGAAATTGAGGGATCATTGGCAGATCTGGATGACCGTCTAGAATCTGGCTCAAAAAAGAGGTATGAAACCTTTATTATTACTATCTATTTGCTCTGTTTTGGATAGAATCAGGCTTTTGCCTCCCCCAACCCCACATGTTTTTGAACTCAAAAAAAGCATCAGCCTTTTGCCTTTTAATAATATGCCAGATTTGAATGTCTTTCCATATAAACCATCTGGGACGTGAGATCATTAGAAAGATATTAGCCGTGGTGTTGTTATTGTCACAAGTAGAGCAGCATGGTTTGAATGAATCATAAGACTTCAGGATTTCTGGGGGTTGGTAATTGACTTTCAGGAAGCATTGTAATTAGTCATCTCGTAATTTCAGATTCCTTTAATTTAGAACTGCCCGAAATTTGCATAAGGGTTATGTTTTAATGGGCTCAAAATTACATACAGGATAGATACTATAACAATTAGTGGTTGGGGGGGTGATGTAGGGTGGTGATATTGCTTGTTTTATGTGACTGATGGAATTTAAGTCCCTTATCTTTTTGTTGAGATGTAAGGCATTTACCTCCTGCAGTGCACAATGCACGGGATAGCTGTTTCCTTATTCGCTATGAGTTAACTGTAGAGTGGTCAATGGAGAGCATTTGGTTTTGTGGCTTGGATGGGAATTAGTGATATAGCCATGATCCTTCATCTTCATCCATTTGAGCTTCAGTCCATTGATTGTTCTGGGCTTTTCATTATAATTATTACATTGCCTACAATTGGAAGTTCCAAGTTGGAATTGCATATGATTTAGTAATAGGCTGTGGATCCATTTGTTTACTTTTATGTAGTTCTCCGTGGTGAAATATGGCTATACATGTTAAAGTTGGTGAGTTGGTTTAAATAAACCTAGATAGAGGAATAATAACAGATTAGAAACTAAAAGTGGAAAGAAATATAATATGGCATCAAATAAAGTACACTCGTTTTGTGTTGCAGGGTCAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGGATAGGCTCAATGACAAGTACTTCCTCTAACCCAAACCAATGGGCAACCCAACACATTTTCCCACTCATTTATGTGTATAACGATTATATCTTGTCCCACCAAAGCATAATTTTTATGATTAATCTCAAAACAGGTTTCTGGAACTGGGCTCCATTTTGGATCCTGGAAGACCGCCCAAAACTGACAAGGCTGCAATTTTAGTTGACGCGGTTCGAATGGTGAATCAGTTGCGTAGCGAAACACAGAAACTAAAGGAATCAAATTCAAGTCTCCAGGAGAAGATTAAAGAGTTGAAGGCAAGCCTCATTGGATTTCTTTCCCAACTATATTATGTGCCAATTTATAAGATCGTCCATTCAATTTGTTTGCATTTGATGCATTTGCATGGAGAAACATGAACTAACAAATCATAATATAATTTCATTTCTTCCAATCTTGTGTAGGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTCAAGGCAGATAAGGAGAGGCTAGAGCAGCAAGTCAAGTCCATGCCTGCTCAACAACCGGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGGGTCAAGCTCCTGGCAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTTGCCATGTGGCAGTTCATGCCACCTGCTGCGGTGGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCATAA

mRNA sequence

ATGGTATCCCCCGAAAATCCCAATTGGTTGTTTGATTATGGTTTGATCGACGACATCCCTGTACCGGATGCGAATTTCCCGGTCACGAGTTCAAGCTTCTCCTGGGCTATTCAGCCCTTTAACGGCATCCATGATACCGGTGTGGAAATTGAGGGATCATTGGCAGATCTGGATGACCGTCTAGAATCTGGCTCAAAAAAGAGGGTCAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGGATAGGCTCAATGACAAGTTTCTGGAACTGGGCTCCATTTTGGATCCTGGAAGACCGCCCAAAACTGACAAGGCTGCAATTTTAGTTGACGCGGTTCGAATGGTGAATCAGTTGCGTAGCGAAACACAGAAACTAAAGGAATCAAATTCAAGTCTCCAGGAGAAGATTAAAGAGTTGAAGGCAAGCCTCATTGGATTTCTTTCCCAACTATATTATGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTCAAGGCAGATAAGGAGAGGCTAGAGCAGCAAGTCAAGTCCATGCCTGCTCAACAACCGGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGGGTCAAGCTCCTGGCAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTTGCCATGTGGCAGTTCATGCCACCTGCTGCGGTGGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCATAA

Coding sequence (CDS)

ATGGTATCCCCCGAAAATCCCAATTGGTTGTTTGATTATGGTTTGATCGACGACATCCCTGTACCGGATGCGAATTTCCCGGTCACGAGTTCAAGCTTCTCCTGGGCTATTCAGCCCTTTAACGGCATCCATGATACCGGTGTGGAAATTGAGGGATCATTGGCAGATCTGGATGACCGTCTAGAATCTGGCTCAAAAAAGAGGGTCAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGGATAGGCTCAATGACAAGTTTCTGGAACTGGGCTCCATTTTGGATCCTGGAAGACCGCCCAAAACTGACAAGGCTGCAATTTTAGTTGACGCGGTTCGAATGGTGAATCAGTTGCGTAGCGAAACACAGAAACTAAAGGAATCAAATTCAAGTCTCCAGGAGAAGATTAAAGAGTTGAAGGCAAGCCTCATTGGATTTCTTTCCCAACTATATTATGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTCAAGGCAGATAAGGAGAGGCTAGAGCAGCAAGTCAAGTCCATGCCTGCTCAACAACCGGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGGGTCAAGCTCCTGGCAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTTGCCATGTGGCAGTTCATGCCACCTGCTGCGGTGGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCATAA

Protein sequence

MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Homology
[Close]
BLAST of Cla001713 vs. Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75
Identity = 158/252 (62.70%), Postives = 181/252 (71.83%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQ-PFNGIHDTGVEIEGSLADLDD 60
           MVSPEN NW+ D  LID       +F +    FSW +Q P     ++   ++GS  + + 
Sbjct: 1   MVSPENANWICD--LID---ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61  RLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDA 120
             E GSKKR R +S SA+SSKACREK RRDRLNDKF+ELG+IL+PG PPKTDKAAILVDA
Sbjct: 61  SKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDA 120

Query: 121 VRMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKER 180
           VRMV QLR E QKLK+SNSSLQ+KIKELK             EKNELRDEKQRLK +KE+
Sbjct: 121 VRMVTQLRGEAQKLKDSNSSLQDKIKELK------------TEKNELRDEKQRLKTEKEK 180

Query: 181 LEQQVKSMPAQQPGFLPPP--IPT--FAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVD 240
           LEQQ+K+M A QP F P P  +PT   +AQGQAPGNK+VP I Y P VAMWQFMPPA+VD
Sbjct: 181 LEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISY-PGVAMWQFMPPASVD 234

Query: 241 TSQDHVLRPPVA 248
           TSQDHVLRPPVA
Sbjct: 241 TSQDHVLRPPVA 234

[Close]
BLAST of Cla001713 vs. Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.2e-70
Identity = 147/250 (58.80%), Postives = 171/250 (68.40%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPEN NWL DY LI+        F   + +F W I   +G     VE++G L D D  
Sbjct: 1   MVSPENTNWLSDYPLIEGA------FSDQNPTFPWQI---DGSATVSVEVDGFLCDADVI 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
            E  S+KR++++SC+ S+SKACREK RRDRLNDKF EL S+L+PGR PKTDK AI+ DA+
Sbjct: 61  KEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAI 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQ R E QKLK+ NSSLQEKIKELK             EKNELRDEKQ+LK +KER+
Sbjct: 121 RMVNQARDEAQKLKDLNSSLQEKIKELK------------DEKNELRDEKQKLKVEKERI 180

Query: 181 EQQ---VKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTS 240
           +QQ   +K+ P  QP FLP   P   +Q QAPG+KLVPF  Y P  AMWQFMPPAAVDTS
Sbjct: 181 DQQLKAIKTQPQPQPCFLPN--PQTLSQAQAPGSKLVPFTTY-PGFAMWQFMPPAAVDTS 226

Query: 241 QDHVLRPPVA 248
           QDHVLRPPVA
Sbjct: 241 QDHVLRPPVA 226

[Close]
BLAST of Cla001713 vs. Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-42
Identity = 104/213 (48.83%), Postives = 133/213 (62.44%), Query Frame = 1 

Query: 38  QPFNGIHDTGVEIEGSL---ADLDDRLESGSKKRVRSDSCSASSSKACREKLRRDRLNDK 97
           Q F+G+    VEI  S    A  ++  E  S KR R+ SCS   +KACREKLRR++LNDK
Sbjct: 126 QVFSGV----VEINSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDK 185

Query: 98  FLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLIGF 157
           F++L S+L+PGR PKTDK+AIL DA+R+VNQLR E  +L+E+N  L E+IK LK      
Sbjct: 186 FMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLK------ 245

Query: 158 LSQLYYAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLV 217
                 A+KNELR+EK  LKA+KE++EQQ+KSM    PGF+P   P  AA          
Sbjct: 246 ------ADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHP--AAFHSHKMAVAY 305

Query: 218 PFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 248
           P+  Y P++ MW  +PPA  DTS+D    PPVA
Sbjct: 306 PYGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]
BLAST of Cla001713 vs. Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 96/198 (48.48%), Postives = 125/198 (63.13%), Query Frame = 1 

Query: 52  GSLADLDDRLESG-SKKRVRSDSCS-ASSSKACREKLRRDRLNDKFLELGSILDPGRPPK 111
           G++ +  + L+   S+KR R+ SCS    +KACRE+LRR++LN++F++L S+L+PGR PK
Sbjct: 105 GAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPK 164

Query: 112 TDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDE 171
           TDK AIL DA+R++NQLR E  KL+E+N  L E+IK LK            AEKNELR+E
Sbjct: 165 TDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLK------------AEKNELREE 224

Query: 172 KQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFM 231
           K  LKADKE+ EQQ+KSM A   GF+P     F     A    + P  GY P   MW +M
Sbjct: 225 KLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFNHNKMA----VYPSYGYMP---MWHYM 283

Query: 232 PPAAVDTSQDHVLRPPVA 248
           P +  DTS+D  LRPP A
Sbjct: 285 PQSVRDTSRDQELRPPAA 283

[Close]
BLAST of Cla001713 vs. Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.6e-19
Identity = 71/201 (35.32%), Postives = 98/201 (48.76%), Query Frame = 1 

Query: 72  DSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQ 131
           D  +  S KA REKLRR++LN+ F+ELG++LDP R PK DKA IL D V+++ +L SE  
Sbjct: 55  DVSARKSQKAGREKLRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVN 114

Query: 132 KLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL----EQQVKSM 191
           KLK   ++L ++ +EL              EKN+LR+EK  LK+D E L    +Q+++SM
Sbjct: 115 KLKSEYTALTDESRELT------------QEKNDLREEKTSLKSDIENLNLQYQQRLRSM 174

Query: 192 P------------AQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYH----------PSVAM 246
                        A  P F P P+P     G  P +  +P   Y           P    
Sbjct: 175 SPWGAAMDHTVMMAPPPSF-PYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTY 234

[Close]
BLAST of Cla001713 vs. TrEMBL
Match: A0A0A0L7N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G415100 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-122
Identity = 225/247 (91.09%), Postives = 228/247 (92.31%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSW IQPFNG HD+GVEI+GSLADLD  
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGH 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLRSETQKLKESNSSLQEKIKELK            AEKNELRDEKQRLKADKERL
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELK------------AEKNELRDEKQRLKADKERL 180

Query: 181 EQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 240
           EQQVKSMPAQQPGFLPPPIPTF AQGQAPGNKL PFIGYHPSVAMWQFMPPAAVDTSQDH
Sbjct: 181 EQQVKSMPAQQPGFLPPPIPTFPAQGQAPGNKLFPFIGYHPSVAMWQFMPPAAVDTSQDH 235

Query: 241 VLRPPVA 248
           VLRPPVA
Sbjct: 241 VLRPPVA 235

[Close]
BLAST of Cla001713 vs. TrEMBL
Match: A0A0A0L7P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G416140 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.8e-117
Identity = 221/247 (89.47%), Postives = 225/247 (91.09%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSW IQPFNG HD+GVEI+GSLADLD R
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLRSETQKLKESNSSLQEKIKELK            AEKN    EKQRLKADKERL
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELK------------AEKN----EKQRLKADKERL 180

Query: 181 EQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 240
           EQQVKS+PAQQPGFLPPPIPTF AQGQA GNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH
Sbjct: 181 EQQVKSIPAQQPGFLPPPIPTFPAQGQA-GNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 230

Query: 241 VLRPPVA 248
           VLRPPVA
Sbjct: 241 VLRPPVA 230

[Close]
BLAST of Cla001713 vs. TrEMBL
Match: M5WHW1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009077mg PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.4e-97
Identity = 193/250 (77.20%), Postives = 207/250 (82.80%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPEN NWLFDYGLIDD PV D NFPV+SS F+W +QP  G     VEI+GSL D +  
Sbjct: 72  MVSPENTNWLFDYGLIDDAPVLDGNFPVSSSGFTWPVQPLAGSSSVSVEIDGSLGDAEGV 131

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
            ESGSKKRVR++SCS SSSKACREKLRRDRLNDKFLELGSIL+PGRPPKTDKAAILVDAV
Sbjct: 132 KESGSKKRVRTESCSGSSSKACREKLRRDRLNDKFLELGSILEPGRPPKTDKAAILVDAV 191

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLR E QKLK+SNSSLQEKIKELK            AEKNELRDEKQRLK +KE+L
Sbjct: 192 RMVNQLRGEAQKLKDSNSSLQEKIKELK------------AEKNELRDEKQRLKLEKEKL 251

Query: 181 EQQVKSMPAQQPGFLPPP--IP-TFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTS 240
           EQQ+K+M A QPGFLPPP  IP  FAAQGQA GNKLVPFIGY P VAMWQFMPPA+VDTS
Sbjct: 252 EQQLKAMNA-QPGFLPPPPAIPAAFAAQGQAHGNKLVPFIGY-PGVAMWQFMPPASVDTS 307

Query: 241 QDHVLRPPVA 248
           QDHVLRPPVA
Sbjct: 312 QDHVLRPPVA 307

[Close]
BLAST of Cla001713 vs. TrEMBL
Match: A0A0U2QJ25_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 7.2e-97
Identity = 191/250 (76.40%), Postives = 207/250 (82.80%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPEN NWLFDYGLIDD PV D NFPV+SS F+W +QP  G     VEI+GSL D +  
Sbjct: 1   MVSPENTNWLFDYGLIDDTPVLDGNFPVSSSGFTWPVQPLAGSSSVSVEIDGSLGDAEGV 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
            ESGSKKRVR++SCS SSSKACREKLRRDRLNDKFLELGSIL+PGRPPKTDKAAILVDAV
Sbjct: 61  KESGSKKRVRTESCSGSSSKACREKLRRDRLNDKFLELGSILEPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLR E QKLK+SNSSLQEKIKELK            AEKNELRDEK RLK++K++L
Sbjct: 121 RMVNQLRGEAQKLKDSNSSLQEKIKELK------------AEKNELRDEKSRLKSEKDKL 180

Query: 181 EQQVKSMPAQQPGFLPPP--IP-TFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTS 240
           EQQ+K+M A QPGFLPPP  IP  FAAQGQA GNKLVPFIGY P VAMWQFMPPA+VDTS
Sbjct: 181 EQQLKAMNA-QPGFLPPPPAIPAAFAAQGQAHGNKLVPFIGY-PGVAMWQFMPPASVDTS 236

Query: 241 QDHVLRPPVA 248
           QDHVLRPPVA
Sbjct: 241 QDHVLRPPVA 236

[Close]
BLAST of Cla001713 vs. TrEMBL
Match: W9RCN9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021173 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.2e-96
Identity = 190/250 (76.00%), Postives = 204/250 (81.60%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPEN NWLFDYGLIDDIPVPDANF V+SS F+W +QP NG      EI+GSL D +  
Sbjct: 1   MVSPENTNWLFDYGLIDDIPVPDANFSVSSSGFTWPVQPLNGSSAVSAEIDGSLGDSEGP 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
            ESGSKKRVRS+S  ASSSKACREK RRDRLNDKF+ELGSIL+PGRPPKTDKAAIL+DAV
Sbjct: 61  KESGSKKRVRSESNGASSSKACREKQRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLR E QKLK+SN SLQEKIKELKA +          EKNELRDEKQRLK +KE+L
Sbjct: 121 RMVNQLRGEAQKLKDSNLSLQEKIKELKARV----------EKNELRDEKQRLKGEKEKL 180

Query: 181 EQQVKSMPAQQPGFLPPP--IP-TFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTS 240
           E Q+K M AQ  GFLPPP  IP  FAAQGQAPGNKLVPFI Y P VAMWQFMPPAAVDTS
Sbjct: 181 ELQLKGMNAQPAGFLPPPAAIPAAFAAQGQAPGNKLVPFISY-PGVAMWQFMPPAAVDTS 239

Query: 241 QDHVLRPPVA 248
           QDHVLRPPVA
Sbjct: 241 QDHVLRPPVA 239

[Close]
BLAST of Cla001713 vs. NCBI nr
Match: gi|659109126|ref|XP_008454561.1| (PREDICTED: transcription factor ILR3-like [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 3.7e-123
Identity = 226/247 (91.50%), Postives = 229/247 (92.71%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSWAIQ FNG HDTGVEI+GSLADLD R
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWAIQTFNGAHDTGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLRSETQKLKESNSSLQEKIKELK            AEKNELRDEKQRLKADKERL
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELK------------AEKNELRDEKQRLKADKERL 180

Query: 181 EQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 240
           EQQVKSMPAQQPGFLPPPIPTF AQGQAPGNKL PFIGYHPSVAMWQFMPPAAVDTSQDH
Sbjct: 181 EQQVKSMPAQQPGFLPPPIPTFPAQGQAPGNKLFPFIGYHPSVAMWQFMPPAAVDTSQDH 235

Query: 241 VLRPPVA 248
           +LRPPVA
Sbjct: 241 ILRPPVA 235

[Close]
BLAST of Cla001713 vs. NCBI nr
Match: gi|778681166|ref|XP_004151962.2| (PREDICTED: transcription factor ILR3-like [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.9e-122
Identity = 225/247 (91.09%), Postives = 228/247 (92.31%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSW IQPFNG HD+GVEI+GSLADLD  
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGH 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLRSETQKLKESNSSLQEKIKELK            AEKNELRDEKQRLKADKERL
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELK------------AEKNELRDEKQRLKADKERL 180

Query: 181 EQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 240
           EQQVKSMPAQQPGFLPPPIPTF AQGQAPGNKL PFIGYHPSVAMWQFMPPAAVDTSQDH
Sbjct: 181 EQQVKSMPAQQPGFLPPPIPTFPAQGQAPGNKLFPFIGYHPSVAMWQFMPPAAVDTSQDH 235

Query: 241 VLRPPVA 248
           VLRPPVA
Sbjct: 241 VLRPPVA 235

[Close]
BLAST of Cla001713 vs. NCBI nr
Match: gi|659109120|ref|XP_008454558.1| (PREDICTED: transcription factor ILR3-like isoform X1 [Cucumis melo])

HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-120
Identity = 223/247 (90.28%), Postives = 228/247 (92.31%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSF+WAIQPFNG HDTGVEI+GSLAD+D R
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFTWAIQPFNGAHDTGVEIDGSLADVDGR 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLRSET KLKESNSSLQEKIKELK            AEKNELRDEKQRLKADKERL
Sbjct: 121 RMVNQLRSETHKLKESNSSLQEKIKELK------------AEKNELRDEKQRLKADKERL 180

Query: 181 EQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 240
           EQQVKSMPAQQPGFL PPIPTF AQGQAPGNKL PF+GYHPSVAMWQFMPPAAVDTSQDH
Sbjct: 181 EQQVKSMPAQQPGFL-PPIPTFPAQGQAPGNKLFPFVGYHPSVAMWQFMPPAAVDTSQDH 234

Query: 241 VLRPPVA 248
           VLRPPVA
Sbjct: 241 VLRPPVA 234

[Close]
BLAST of Cla001713 vs. NCBI nr
Match: gi|778681173|ref|XP_004151959.2| (PREDICTED: transcription factor ILR3 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 6.8e-117
Identity = 221/247 (89.47%), Postives = 225/247 (91.09%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSW IQPFNG HD+GVEI+GSLADLD R
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLRSETQKLKESNSSLQEKIKELK            AEKN    EKQRLKADKERL
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELK------------AEKN----EKQRLKADKERL 180

Query: 181 EQQVKSMPAQQPGFLPPPIPTFAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 240
           EQQVKS+PAQQPGFLPPPIPTF AQGQA GNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH
Sbjct: 181 EQQVKSIPAQQPGFLPPPIPTFPAQGQA-GNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH 230

Query: 241 VLRPPVA 248
           VLRPPVA
Sbjct: 241 VLRPPVA 230

[Close]
BLAST of Cla001713 vs. NCBI nr
Match: gi|1009110887|ref|XP_015898140.1| (PREDICTED: transcription factor ILR3 [Ziziphus jujuba])

HSP 1 Score: 365.9 bits (938), Expect = 5.4e-98
Identity = 190/250 (76.00%), Postives = 209/250 (83.60%), Query Frame = 1 

Query: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWAIQPFNGIHDTGVEIEGSLADLDDR 60
           MVSPEN NW  DYGLID+IPVPDANFPV+SS F+W++Q  NG     VEI+ SL D D  
Sbjct: 1   MVSPENTNWFIDYGLIDEIPVPDANFPVSSSGFNWSVQTLNGSSSVSVEIDNSLGDSDGL 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120
            ESGSKKRVRSD+C +SSSKACREKLRRDRLNDKFLELG+IL+PGRPPKTDKAAIL+DAV
Sbjct: 61  KESGSKKRVRSDTCGSSSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDAV 120

Query: 121 RMVNQLRSETQKLKESNSSLQEKIKELKASLIGFLSQLYYAEKNELRDEKQRLKADKERL 180
           RMVNQLR E QKLK+SNS+LQEKIKELK            AEKNELRDEKQRLK +KE+L
Sbjct: 121 RMVNQLRGEAQKLKDSNSNLQEKIKELK------------AEKNELRDEKQRLKGEKEKL 180

Query: 181 EQQVKSMPAQQPGFLPPP--IPT-FAAQGQAPGNKLVPFIGYHPSVAMWQFMPPAAVDTS 240
           EQQ+K++ A QPGFLPPP  IP  +AAQGQAPGNKLVPFIGY P VAMWQFMPPAAVDTS
Sbjct: 181 EQQLKAVNA-QPGFLPPPPAIPAPYAAQGQAPGNKLVPFIGY-PGVAMWQFMPPAAVDTS 236

Query: 241 QDHVLRPPVA 248
           QDHVLRPPVA
Sbjct: 241 QDHVLRPPVA 236

The following BLAST results are available for this feature:
BLAST of Cla001713 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ILR3_ARATH1.3e-7562.70Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1[more]
BH115_ARATH8.2e-7058.80Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1[more]
BH034_ARATH5.5e-4248.83Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1[more]
BH104_ARATH1.4e-4048.48Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1[more]
BH121_ARATH6.6e-1935.32Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1[more]
BLAST of Cla001713 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7N8_CUCSA1.3e-12291.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G415100 PE=4 SV=1[more]
A0A0A0L7P5_CUCSA4.8e-11789.47Uncharacterized protein OS=Cucumis sativus GN=Csa_3G416140 PE=4 SV=1[more]
M5WHW1_PRUPE1.4e-9777.20Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009077mg PE=4 SV=1[more]
A0A0U2QJ25_9ROSA7.2e-9776.40BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1[more]
W9RCN9_9ROSA1.2e-9676.00Uncharacterized protein OS=Morus notabilis GN=L484_021173 PE=4 SV=1[more]
BLAST of Cla001713 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109126|ref|XP_008454561.1|3.7e-12391.50PREDICTED: transcription factor ILR3-like [Cucumis melo][more]
gi|778681166|ref|XP_004151962.2|1.9e-12291.09PREDICTED: transcription factor ILR3-like [Cucumis sativus][more]
gi|659109120|ref|XP_008454558.1|1.3e-12090.28PREDICTED: transcription factor ILR3-like isoform X1 [Cucumis melo][more]
gi|778681173|ref|XP_004151959.2|6.8e-11789.47PREDICTED: transcription factor ILR3 [Cucumis sativus][more]
gi|1009110887|ref|XP_015898140.1|5.4e-9876.00PREDICTED: transcription factor ILR3 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005623 cell
molecular_function GO:0046983 protein dimerization activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU36017watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001713Cla001713.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU36017WMU36017transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 79..148
score: 2.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 79..126
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 81..132
score: 8.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 75..126
score: 13
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 75..146
score: 1.22
NoneNo IPR availableunknownCoilCoilcoord: 123..150
score: -coord: 156..190
scor
NoneNo IPR availablePANTHERPTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAScoord: 1..144
score: 7.4E-139coord: 162..247
score: 7.4E
NoneNo IPR availablePANTHERPTHR23042:SF67TRANSCRIPTION FACTOR ILR3-RELATEDcoord: 162..247
score: 7.4E-139coord: 1..144
score: 7.4E