Cla001623 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001623
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pathogenesis-related protein 1a (AHRD V1 ***- Q00MX6_MALDO); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
Location	Chr2 : 8310905 .. 8311396 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTCTCATGAAGCTCTTCCTCTCCCTCTTTTGTGTCTTGAGCTTTGCCATGCTGCCCTCCTCTCTTGCTCAAGACTCGCCTCAAGACTTTGTCAACGCCCACAATGCGGCACGTGCCCAAGTTGGTGTCGGTCCGGTCCATTGGGATGAAAGAGTAGCAAGTTTTGCTCGACAATATGCCAACCAACGCATCAACGACTGTAAGTTGGTGCACTCAGGTGGACCGTACGGGGAGAATATTGCATGGGGTTGGCCAGACTTATCAGGCACGGCTGCAGTTAAGATGTGGGTCGATGAGAAGCAATTCTACAATCATCGCACCAATACATGTGCGGCTGGCAAGGTGTGCGGTCATTATACTCAAGTTGTGTGGAGAAATTCAGTGAGAATCGGGTGTGCTAAAGTGAGATGCACAAACAATGGTGGTACATTCATCATTTGCAACTATGACCCACGAGGCAATATCGTAGGTCAAAGGCCATATTGA

mRNA sequence

ATGGAACTTCTCATGAAGCTCTTCCTCTCCCTCTTTTGTGTCTTGAGCTTTGCCATGCTGCCCTCCTCTCTTGCTCAAGACTCGCCTCAAGACTTTGTCAACGCCCACAATGCGGCACGTGCCCAAGTTGGTGTCGGTCCGGTCCATTGGGATGAAAGAGTAGCAAGTTTTGCTCGACAATATGCCAACCAACGCATCAACGACTGTAAGTTGGTGCACTCAGGTGGACCGTACGGGGAGAATATTGCATGGGGTTGGCCAGACTTATCAGGCACGGCTGCAGTTAAGATGTGGGTCGATGAGAAGCAATTCTACAATCATCGCACCAATACATGTGCGGCTGGCAAGGTGTGCGGTCATTATACTCAAGTTGTGTGGAGAAATTCAGTGAGAATCGGGTGTGCTAAAGTGAGATGCACAAACAATGGTGGTACATTCATCATTTGCAACTATGACCCACGAGGCAATATCGTAGGTCAAAGGCCATATTGA

Coding sequence (CDS)

ATGGAACTTCTCATGAAGCTCTTCCTCTCCCTCTTTTGTGTCTTGAGCTTTGCCATGCTGCCCTCCTCTCTTGCTCAAGACTCGCCTCAAGACTTTGTCAACGCCCACAATGCGGCACGTGCCCAAGTTGGTGTCGGTCCGGTCCATTGGGATGAAAGAGTAGCAAGTTTTGCTCGACAATATGCCAACCAACGCATCAACGACTGTAAGTTGGTGCACTCAGGTGGACCGTACGGGGAGAATATTGCATGGGGTTGGCCAGACTTATCAGGCACGGCTGCAGTTAAGATGTGGGTCGATGAGAAGCAATTCTACAATCATCGCACCAATACATGTGCGGCTGGCAAGGTGTGCGGTCATTATACTCAAGTTGTGTGGAGAAATTCAGTGAGAATCGGGTGTGCTAAAGTGAGATGCACAAACAATGGTGGTACATTCATCATTTGCAACTATGACCCACGAGGCAATATCGTAGGTCAAAGGCCATATTGA

Protein sequence

MELLMKLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY

Homology

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BLAST of Cla001623 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-55
Identity = 101/156 (64.74%), Postives = 116/156 (74.36%), Query Frame = 1


Query: 8   FLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRIN 67
           FL +F  L  A++  S AQDSPQD++  HN AR  VGVGP+ WDERVA++AR YA Q   
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 68  DCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVWR 127
           +C+L+HSGGPYGEN+AWG  DLSG +AV MWV EK  YN+  NTC    VCGHYTQVVWR
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWR 128

Query: 128 NSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
            SVR+GCAKVRC NNGGT I CNYDPRGN V ++PY
Sbjct: 129 KSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cla001623 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.4e-55
Identity = 98/152 (64.47%), Postives = 122/152 (80.26%), Query Frame = 1


Query: 13  CVLSFAML-PSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCKL 72
           C ++FA+L  SS AQ+SPQD++N HNAAR QVGVGP+ WD R+A++A+ YANQRI DC +
Sbjct: 10  CFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGM 69

Query: 73  VHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVWRNSVR 132
           +HS GPYGEN+A  +P L+   AVKMWVDEK+FY++ +N+C  G VCGHYTQVVWRNSVR
Sbjct: 70  IHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHYTQVVWRNSVR 129

Query: 133 IGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           +GCA+VR +NNG  FI CNYDP GN +GQRP+
Sbjct: 130 LGCARVR-SNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cla001623 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.4e-55
Identity = 102/160 (63.75%), Postives = 118/160 (73.75%), Query Frame = 1


Query: 6   KLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQR 65
           KL + L   +S AM+  S AQ+SPQD+V+ HNAARA VGVG V W  ++ +FA+ YANQR
Sbjct: 5   KLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 66  INDCKLVHSGGPYGENIAWG--WPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQ 125
           INDCKL HSGGPYGENI WG    D   + AV  WV EK+ Y++ +NTCAAGKVCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQ 124

Query: 126 VVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           VVWR S  IGCA+V C NN G FI CNY+PRGNIVGQ+PY
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cla001623 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-54
Identity = 101/160 (63.12%), Postives = 118/160 (73.75%), Query Frame = 1


Query: 6   KLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQR 65
           KL + L   ++ AM+  S AQ+SPQD+V+ HNAAR+ VGVG V W  ++ +FA+ YANQR
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 66  INDCKLVHSGGPYGENIAWG--WPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQ 125
           INDCKL HSGGPYGENI WG    D     AV  WV+EK+ YN+ +NTCAAGKVCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQ 124

Query: 126 VVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           VVWR S  IGCA+V C NN G FI CNY+PRGNIVGQ+PY
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cla001623 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-54
Identity = 104/157 (66.24%), Postives = 120/157 (76.43%), Query Frame = 1


Query: 9   LSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRIND 68
           ++L CV++  M+  S+AQ+SPQD+V+AHNAAR+ V VGPV WDE VA+FARQYA  R  D
Sbjct: 12  VALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGD 71

Query: 69  CKLVHSGGP-YGENIAWGWP-DLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVW 128
           C+LVHSG P YGEN+A+G   +L+G  AV MWV E+  YN  TNTCA GKVCGHYTQVVW
Sbjct: 72  CRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVW 131

Query: 129 RNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           RNSVRIGCA+VRC NNG  FI CNY P GN  GQRPY
Sbjct: 132 RNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Cla001623 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 9.6e-74
Identity = 132/161 (81.99%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 3   LLMKLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 62
           L + L LSLFCVL+F MLPSSLAQDSPQDF++AHN ARAQ GV PV WDE VASFA QYA
Sbjct: 4   LKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYA 63

Query: 63  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 122
           NQRINDC LVHSGGPYGENIAWG PDLSGTAAV+MWV+EK+FY++ +NTCAA +VCGHYT
Sbjct: 64  NQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYT 123

Query: 123 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVWRNSVRIGCAKV CTNNGGTFI CNYDP GN VGQRPY
Sbjct: 124 QVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cla001623 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-70
Identity = 121/161 (75.16%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 4   LMKLFLSLFCVLS-FAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 63
           L+ L   LFCVLS F MLPSSLAQDSPQD+VN+HN ARA VGVGP+ WDE+VA+++R YA
Sbjct: 3   LLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYA 62

Query: 64  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 123
           N+R+NDC+LVHS GPYGENIAWG PDLSG  AVK+WVDEKQ+YN+ +N+CA+GKVCGHYT
Sbjct: 63  NKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYT 122

Query: 124 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVW+NS+R+GCAKV+C N GG FI+CNYDPRGNIVGQRPY
Sbjct: 123 QVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cla001623 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-68
Identity = 120/130 (92.31%), Postives = 127/130 (97.69%), Query Frame = 1


Query: 26  QDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCKLVHSGGPYGENIAWG 85
           QDSP+DFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDC+LVHSGGPYGENIAWG
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 86  WPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNGGT 145
            PDLSGTAAV+MWV+EKQFYN+ +NTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNN GT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 146 FIICNYDPRG 156
           FIICNY+PRG
Sbjct: 121 FIICNYEPRG 130

[Close]

BLAST of Cla001623 vs. TrEMBL
Match: A0A067KUE2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09872 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.6e-63
Identity = 116/161 (72.05%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 3   LLMKLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 62
           +L K+ L L C++S  ++    AQDSPQD+VNAHN ARA VGVGPV WD  VA++AR YA
Sbjct: 1   MLSKILLPLICLMSVTLIIPLHAQDSPQDYVNAHNTARAAVGVGPVTWDNTVAAYARNYA 60

Query: 63  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 122
           N+ I DC+LVHSGGPYGEN+A     LSGTAAVK+WVDEK FYN+ +NTCAAGKVCGHYT
Sbjct: 61  NRHIGDCRLVHSGGPYGENLAGSSGYLSGTAAVKLWVDEKAFYNYNSNTCAAGKVCGHYT 120

Query: 123 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVWRNSVRIGCAKV+C NNGGTFI CNYDP GN VGQRPY
Sbjct: 121 QVVWRNSVRIGCAKVKC-NNGGTFITCNYDPPGNYVGQRPY 160

[Close]

BLAST of Cla001623 vs. TrEMBL
Match: V4U9J3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 9.9e-63
Identity = 113/155 (72.90%), Postives = 129/155 (83.23%), Query Frame = 1


Query: 9   LSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRIND 68
           L LFC+L  A++ SS AQD PQD+VNAHNAARAQVGVGPV WD+RVAS+A+ YAN+R  D
Sbjct: 9   LPLFCILGLALILSSHAQDLPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANKRKGD 68

Query: 69  CKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVWRN 128
           C LVHSGGPYGEN+AW    LSGT AVK+WV+EK  Y++ +NTCAAGKVCGHYTQVVWR 
Sbjct: 69  CNLVHSGGPYGENLAWSSAGLSGTDAVKLWVNEKADYDYNSNTCAAGKVCGHYTQVVWRK 128

Query: 129 SVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           SVRIGCAKV C NN GTFI CNYDP GN VG++PY
Sbjct: 129 SVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of Cla001623 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-82
Identity = 143/161 (88.82%), Postives = 154/161 (95.65%), Query Frame = 1


Query: 3   LLMKLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 62
           L + L LSLFCVL+F MLPSSLAQDSP+DFVNAHNAARAQVGVGPVHWDERVASFARQYA
Sbjct: 4   LKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYA 63

Query: 63  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 122
           NQRINDC+LVHSGGPYGENIAWG PDLSGTAAV+MWV+EKQFYN+ +NTCAAGKVCGHYT
Sbjct: 64  NQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYT 123

Query: 123 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVWRNSVRIGCAKVRCTNN GTFIICNY+PRGNI+GQ+PY
Sbjct: 124 QVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cla001623 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73
Identity = 132/161 (81.99%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 3   LLMKLFLSLFCVLSFAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 62
           L + L LSLFCVL+F MLPSSLAQDSPQDF++AHN ARAQ GV PV WDE VASFA QYA
Sbjct: 4   LKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYA 63

Query: 63  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 122
           NQRINDC LVHSGGPYGENIAWG PDLSGTAAV+MWV+EK+FY++ +NTCAA +VCGHYT
Sbjct: 64  NQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYT 123

Query: 123 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVWRNSVRIGCAKV CTNNGGTFI CNYDP GN VGQRPY
Sbjct: 124 QVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cla001623 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 3.2e-70
Identity = 121/161 (75.16%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 4   LMKLFLSLFCVLS-FAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 63
           L+ L   LFCVLS F MLPSSLAQDSPQD+VN+HN ARA VGVGP+ WDE+VA+++R YA
Sbjct: 3   LLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYA 62

Query: 64  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 123
           N+R+NDC+LVHS GPYGENIAWG PDLSG  AVK+WVDEKQ+YN+ +N+CA+GKVCGHYT
Sbjct: 63  NKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYT 122

Query: 124 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVW+NS+R+GCAKV+C N GG FI+CNYDPRGNIVGQRPY
Sbjct: 123 QVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cla001623 vs. NCBI nr
Match: gi|377347202|dbj|BAL63012.1| (pathogenesis-related protein 1-1a, partial [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-68
Identity = 120/130 (92.31%), Postives = 127/130 (97.69%), Query Frame = 1


Query: 26  QDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCKLVHSGGPYGENIAWG 85
           QDSP+DFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDC+LVHSGGPYGENIAWG
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 86  WPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNGGT 145
            PDLSGTAAV+MWV+EKQFYN+ +NTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNN GT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 146 FIICNYDPRG 156
           FIICNY+PRG
Sbjct: 121 FIICNYEPRG 130

[Close]

BLAST of Cla001623 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 1.9e-67
Identity = 118/161 (73.29%), Postives = 140/161 (86.96%), Query Frame = 1


Query: 4   LMKLFLSLFCVLS-FAMLPSSLAQDSPQDFVNAHNAARAQVGVGPVHWDERVASFARQYA 63
           L+ L   LFCVL+ F MLPSSLAQDSPQD++N HN ARA V V  + WDE+VA+++RQYA
Sbjct: 3   LLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYA 62

Query: 64  NQRINDCKLVHSGGPYGENIAWGWPDLSGTAAVKMWVDEKQFYNHRTNTCAAGKVCGHYT 123
           N R+NDC+LVHS GPYGENIAWG PDLSGT AVK+WV+EKQ+Y++ TN+CA+GKVCGHYT
Sbjct: 63  NLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYT 122

Query: 124 QVVWRNSVRIGCAKVRCTNNGGTFIICNYDPRGNIVGQRPY 164
           QVVW+NSVR+GCAKV+C N GG FI+CNYDPRGNIVGQRPY
Sbjct: 123 QVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

The following BLAST results are available for this feature:

BLAST of Cla001623 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_ARATH	2.2e-55	64.74	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_TOBAC	6.4e-55	64.47	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR13_HORVU	6.4e-55	63.75	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]
PR12_HORVU	1.1e-54	63.13	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_SAMNI	1.1e-54	66.24	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of Cla001623 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A4_CUCSA	9.6e-74	81.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
A0A0A0K2V9_CUCSA	2.2e-70	75.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
H3K3Z1_CUCME	2.7e-68	92.31	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1	[more]
A0A067KUE2_JATCU	2.6e-63	72.05	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09872 PE=3 SV=1	[more]
V4U9J3_9ROSI	9.9e-63	72.90	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1	[more]

BLAST of Cla001623 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110129\|ref\|XP_008455064.1\|	6.2e-82	88.82	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|778724783\|ref\|XP_011658861.1\|	1.4e-73	81.99	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	3.2e-70	75.16	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|377347202\|dbj\|BAL63012.1\|	3.9e-68	92.31	pathogenesis-related protein 1-1a, partial [Cucumis melo]	[more]
gi\|659110127\|ref\|XP_008455062.1\|	1.9e-67	73.29	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001623	Cla001623.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 48..66 score: 4.3E-20coord: 94..107 score: 4.3E-20coord: 146..159 score: 4.3E-20coord: 118..134 score: 4.3
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..163 score: 2.2
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 21..163 score: 3.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..151 score: 1.4
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..159 score: 2.4
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 5..163 score: 5.89
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 146..157 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..163 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001623	MELO3C018034	Melon (DHL92) v3.5.1	mewmB537

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla001623	Cla006469	Watermelon (97103) v1	wmwmB054

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001623	Cucumber (Chinese Long) v3	cucwmB635
Cla001623	Watermelon (97103) v2	wmwmbB317
Cla001623	Wax gourd	wgowmB279
Cla001623	Cucumber (Gy14) v1	cgywmB427
Cla001623	Cucurbita maxima (Rimu)	cmawmB127
Cla001623	Cucurbita maxima (Rimu)	cmawmB503
Cla001623	Cucurbita moschata (Rifu)	cmowmB109
Cla001623	Cucurbita moschata (Rifu)	cmowmB496
Cla001623	Cucurbita moschata (Rifu)	cmowmB721
Cla001623	Melon (DHL92) v3.5.1	mewmB240
Cla001623	Watermelon (Charleston Gray)	wcgwmB198
Cla001623	Cucumber (Chinese Long) v2	cuwmB605
Cla001623	Cucurbita pepo (Zucchini)	cpewmB268
Cla001623	Cucurbita pepo (Zucchini)	cpewmB665
Cla001623	Bottle gourd (USVL1VR-Ls)	lsiwmB268
Cla001623	Melon (DHL92) v3.6.1	medwmB232
Cla001623	Melon (DHL92) v3.6.1	medwmB522