Cla001615 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001615
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Tubulin alpha-1 chain (AHRD V1 ***- A9PHZ8_POPTR); contains Interpro domain(s) IPR002452 Alpha tubulin
Location	Chr2 : 8183999 .. 8186643 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAGTGCATCTCGATTCACATAGGTCAGGCAGGGATTCAGGTTGGCAATGCATGCTGGGAACTGTACTGCCTTGAACATGGAATTCAGGTCTATCCCTTTCTACTTTCTCCGATGTTTTGTTTCATTTTATGTTTATGATGTATTTCAATTCTTTTAATTTTAATCTGCTTTAATTTGTTTGCTTTTTTTGTCTTCTCTCATTGCATGTTTGCTTGATAGATTTTGAATGAATTTCTAAACGGTACGTATCAATTGCGTGATTTTGTTTTGGTAATACTTTGATCATGTGCTAATTCTCTGGTTATTTCAATATATGTATGTTTTTTTTTGAATTCTTGTATGGATCTTTAATTTTGGATATGTGTTAGGATCTTTTTTTTGGATTATTCGATTATCAGTTCTTGTTTTACACTCGTTTCTTCTTCTGAATAGGATATGTTAGATAGTGTTCTTCCACCTAATGTTTCTATTTGCTCTTCATAATTCTACTGAGATCTGATTGATATTTGTGAAAATAGTTAGCTGTTTCTTATTAGAGTTTCTAGTTTTAGAACTTTCACGTCATTAAAAAATGAACTGAAATGATTATATGTGGGTATGGAATTCAATTCAAGTGTGCGAATGTTTATTCTTTTTCTTTTTTCCACGAGAATTGTAATGAATTCCAAATTTGAGTTTCATGCTGTCCAAGGATAAAATTTCAATGTTTATATCAATATGAAAATATAAAATATTGATTATCAACATATAGTTCTTATAAGTCGCTAAATTTATAAATTTTAGTTAGATGAATTTTTTTTTTTTTGTTTTTTCTCCCAAACTAAGTTATGAACATTGTTATTAATATTTCTATTTATATTTAGTCTAAGTAGATAAGGTTTTTCATGTTTTAAGAGCATTTATAAAAAATGTTGGAGATATCCTTGATTTATAGATATATAAATATATATATAGATGGATATATCAGACATGTTGAGGGATATTTTTATCTTGTCTAAATTTTTTCATCTGTATTTCAGCCTGATGGTCGAATGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGTAGCTGGAGGCGATGATGCCTTCAACACCTTCTTCAGTGAAACAGGTGCAGGCAAGCATGTTCCTCGTGCTGTTTTTGTTGATCTCGAGCCTACTGTCATTGATGAGGTGAGGACTGGAATGTATCGCCAATTGTTCCATCCTGAACAGCTAATCAGCGGCAAAGAAGATGCTGCCAACAACTTTGCTCGTGGCCATTACACCAGTAAGCATCTCAAATTGTCACATTCGTATAAGCTAATTCAATCAATATTTTGAACGTATACCATGGTGTTTTTTCATGAACTGTGTAATGATAATTGGAAAAACTTGTGTTTCAGTTGGCAAGGAGATTGTTGATCTCTGTTTGGATCGCATTAGAAAGCTCGCTGACAACTGCACTGGACTTCAAGGCTTCCTGGTGTTTAACGCTGTTGGTGGGGGTACTGGATCTGGTCTTGGCTCCCTCCTTTTGGAGCGTTTGTCTGTTGACTATGGCAAGAAATCAAAGCTTGGTTTCACTGTTTATCCCTCTCCACAAGTTTCCACCTCTGTTGTTGAACCTTACAACAGTGTTCTTTCAACCCATTCCCTCCTTGAACATACAGATGTTTCTGTGCTTCTTGACAATGAGGCCATTTATGACATCTGTAGACGCTCCCTTGACATTGAGCGACCAACATACACAAACCTCAACCGTCTCATCTCTCAGGTACATATTAACTGCCTTTCATTTTCTTGAATGTTGTGGTGACAAATTGGTTAAAATATCATTTTGATCTTTAATTTTTGGCACCTTTACTTTCAAATGATGAACTTGACTAATCTAACAAATTTTATCATGGACTACTGTTTCTTTGAAATGATGTTCAGGTGATTTCGTCCTTGACAGCCTCTCTACGGTTCGATGGAGCTCTGAATGTAGACGTCACTGAGTTCCAAACGAATTTAGTCCCTTACCCAAGAATCCACTTCATGCTTTCCTCCTATGCCCCTGTGATCTCTGCAGAGAAGGCCTACCATGAACAGCTCTCTGTAGCGGAGATCACCAACAGCGCATTCGAGCCATCTTCCATGATGGCCAAGTGCGATCCCCGCCATGGGAAGTACATGGCTTGCTGTCTGATGTATCGAGGAGATGTTGTTCCGAAGGACGTCAATGCCGCTGTTGCAACCATCAAAACCAAGCGCACGATCCAGTTCGTGGATTGGTGCCCCACTGGTTTCAAGTGTGGCATTAACTACCAGCCGCCAACGGTGGTTCCGGGCGGTGACCTTGCCAAGGTGCAGAGGGCAGTGTGTATGATCTCCAACTCGACCAGCGTAGCGGAGGTGTTCTCTCGCATAGACCATAAGTTTGATCTGATGTATGCAAAGAGGGCCTTTGTGCATTGGTACGTGGGGGAGGGCATGGAGGAGGGAGAGTTCTCTGAAGCTCGCGAGGATCTTGCGGCGCTTGAGAAGGATTATGAGGAAGTGGGCGCTGAGTCTGGTGAAGGTGATGATGAAGATGAGGAGTACTGA

mRNA sequence

ATGAGGGAGTGCATCTCGATTCACATAGGTCAGGCAGGGATTCAGGTTGGCAATGCATGCTGGGAACTGTACTGCCTTGAACATGGAATTCAGATTTTGAATGAATTTCTAAACGCTGGAGGCGATGATGCCTTCAACACCTTCTTCAGTGAAACAGGTGCAGGCAAGCATGTTCCTCGTGCTGTTTTTGTTGATCTCGAGCCTACTGTCATTGATGAGGTGAGGACTGGAATGTATCGCCAATTGTTCCATCCTGAACAGCTAATCAGCGGCAAAGAAGATGCTGCCAACAACTTTGCTCGTGGCCATTACACCATTGGCAAGGAGATTGTTGATCTCTGTTTGGATCGCATTAGAAAGCTCGCTGACAACTGCACTGGACTTCAAGGCTTCCTGGTGTTTAACGCTGTTGGTGGGGGTACTGGATCTGGTCTTGGCTCCCTCCTTTTGGAGCGTTTGTCTGTTGACTATGGCAAGAAATCAAAGCTTGGTTTCACTGTTTATCCCTCTCCACAAGTTTCCACCTCTGTTGTTGAACCTTACAACAGTGTTCTTTCAACCCATTCCCTCCTTGAACATACAGATGTTTCTGTGCTTCTTGACAATGAGGCCATTTATGACATCTGTAGACGCTCCCTTGACATTGAGCGACCAACATACACAAACCTCAACCGTCTCATCTCTCAGGTGATTTCGTCCTTGACAGCCTCTCTACGGTTCGATGGAGCTCTGAATGTAGACGTCACTGAGTTCCAAACGAATTTAGTCCCTTACCCAAGAATCCACTTCATGCTTTCCTCCTATGCCCCTGTGATCTCTGCAGAGAAGGCCTACCATGAACAGCTCTCTGTAGCGGAGATCACCAACAGCGCATTCGAGCCATCTTCCATGATGGCCAAGTGCGATCCCCGCCATGGGAAGTACATGGCTTGCTGTCTGATGTATCGAGGAGATGTTGTTCCGAAGGACGTCAATGCCGCTGTTGCAACCATCAAAACCAAGCGCACGATCCAGTTCGTGGATTGGTGCCCCACTGGTTTCAAGTGTGGCATTAACTACCAGCCGCCAACGGTGGTTCCGGGCGGTGACCTTGCCAAGGTGCAGAGGGCAGTGTGTATGATCTCCAACTCGACCAGCGTAGCGGAGGTGTTCTCTCGCATAGACCATAAGTTTGATCTGATGTATGCAAAGAGGGCCTTTGTGCATTGGTACGTGGGGGAGGGCATGGAGGAGGGAGAGTTCTCTGAAGCTCGCGAGGATCTTGCGGCGCTTGAGAAGGATTATGAGGAAGTGGGCGCTGAGTCTGGTGAAGGTGATGATGAAGATGAGGAGTACTGA

Coding sequence (CDS)

ATGAGGGAGTGCATCTCGATTCACATAGGTCAGGCAGGGATTCAGGTTGGCAATGCATGCTGGGAACTGTACTGCCTTGAACATGGAATTCAGATTTTGAATGAATTTCTAAACGCTGGAGGCGATGATGCCTTCAACACCTTCTTCAGTGAAACAGGTGCAGGCAAGCATGTTCCTCGTGCTGTTTTTGTTGATCTCGAGCCTACTGTCATTGATGAGGTGAGGACTGGAATGTATCGCCAATTGTTCCATCCTGAACAGCTAATCAGCGGCAAAGAAGATGCTGCCAACAACTTTGCTCGTGGCCATTACACCATTGGCAAGGAGATTGTTGATCTCTGTTTGGATCGCATTAGAAAGCTCGCTGACAACTGCACTGGACTTCAAGGCTTCCTGGTGTTTAACGCTGTTGGTGGGGGTACTGGATCTGGTCTTGGCTCCCTCCTTTTGGAGCGTTTGTCTGTTGACTATGGCAAGAAATCAAAGCTTGGTTTCACTGTTTATCCCTCTCCACAAGTTTCCACCTCTGTTGTTGAACCTTACAACAGTGTTCTTTCAACCCATTCCCTCCTTGAACATACAGATGTTTCTGTGCTTCTTGACAATGAGGCCATTTATGACATCTGTAGACGCTCCCTTGACATTGAGCGACCAACATACACAAACCTCAACCGTCTCATCTCTCAGGTGATTTCGTCCTTGACAGCCTCTCTACGGTTCGATGGAGCTCTGAATGTAGACGTCACTGAGTTCCAAACGAATTTAGTCCCTTACCCAAGAATCCACTTCATGCTTTCCTCCTATGCCCCTGTGATCTCTGCAGAGAAGGCCTACCATGAACAGCTCTCTGTAGCGGAGATCACCAACAGCGCATTCGAGCCATCTTCCATGATGGCCAAGTGCGATCCCCGCCATGGGAAGTACATGGCTTGCTGTCTGATGTATCGAGGAGATGTTGTTCCGAAGGACGTCAATGCCGCTGTTGCAACCATCAAAACCAAGCGCACGATCCAGTTCGTGGATTGGTGCCCCACTGGTTTCAAGTGTGGCATTAACTACCAGCCGCCAACGGTGGTTCCGGGCGGTGACCTTGCCAAGGTGCAGAGGGCAGTGTGTATGATCTCCAACTCGACCAGCGTAGCGGAGGTGTTCTCTCGCATAGACCATAAGTTTGATCTGATGTATGCAAAGAGGGCCTTTGTGCATTGGTACGTGGGGGAGGGCATGGAGGAGGGAGAGTTCTCTGAAGCTCGCGAGGATCTTGCGGCGCTTGAGAAGGATTATGAGGAAGTGGGCGCTGAGTCTGGTGAAGGTGATGATGAAGATGAGGAGTACTGA

Protein sequence

MRECISIHIGQAGIQVGNACWELYCLEHGIQILNEFLNAGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGDDEDEEY

Homology

[Close]

BLAST of Cla001615 vs. Swiss-Prot
Match: TBA5_ARATH (Tubulin alpha-5 chain OS=Arabidopsis thaliana GN=TUBA5 PE=1 SV=2)

HSP 1 Score: 830.9 bits (2145), Expect = 6.7e-240
Identity = 408/450 (90.67%), Postives = 425/450 (94.44%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ   ++      G   DAFNTFFSETGAGK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSV EITN+ FEP+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEG-DDEDEEY 446
           AREDLAALEKDYEEVGAE G+  +DE E+Y
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEEDEGEDY 450

[Close]

BLAST of Cla001615 vs. Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3 chain OS=Arabidopsis thaliana GN=TUBA3 PE=1 SV=2)

HSP 1 Score: 830.9 bits (2145), Expect = 6.7e-240
Identity = 408/450 (90.67%), Postives = 425/450 (94.44%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ   ++      G   DAFNTFFSETGAGK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSV EITN+ FEP+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEG-DDEDEEY 446
           AREDLAALEKDYEEVGAE G+  +DE E+Y
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEEDEGEDY 450

[Close]

BLAST of Cla001615 vs. Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 5.2e-232
Identity = 395/446 (88.57%), Postives = 417/446 (93.50%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ   ++    + G   DAFNTFFSETGAGK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSLGVARDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRA+FVDLEPTVIDEV+TG YRQLFHPEQLIS KEDAANNFARGHYT+G+EIVD CLD
Sbjct: 61  HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREIVDPCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG+KSKLGFT+YPSPQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRLISQVISSLT 
Sbjct: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAP+IS EKAYHEQ SV EITNS FE SS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAYHEQHSVPEITNSVFESSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           +MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRID KFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDED 443
           AREDLAALEKDYEEVGAE  E D+E+
Sbjct: 421 AREDLAALEKDYEEVGAEVEEDDEEE 446

[Close]

BLAST of Cla001615 vs. Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 6.8e-232
Identity = 393/450 (87.33%), Postives = 416/450 (92.44%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ----ILNEFLNAGGDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ    + ++       DAFNTFFSET +G+
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVD CL+
Sbjct: 61  HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD+GKKSKLGFT+YPSPQVST+
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTY+NLNRLISQ ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KAYHEQ SV EIT S FEPS+
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVN AVA IK KRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           +VVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDED-EEY 446
           AREDLAALEKDYEEVG E  E DDE+ +EY
Sbjct: 421 AREDLAALEKDYEEVGGEGAEDDDEEGDEY 450

[Close]

BLAST of Cla001615 vs. Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1)

HSP 1 Score: 801.2 bits (2068), Expect = 5.7e-231
Identity = 384/448 (85.71%), Postives = 418/448 (93.30%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGI----QILNEFLNAGGDDAFNTFFSETGAGK 60
           MRE +SIHIGQAG QVGNACWELYCLEHGI    Q+ ++    GGDDAFNTFFSET +GK
Sbjct: 1   MREILSIHIGQAGAQVGNACWELYCLEHGIKPDGQMPSDKSVGGGDDAFNTFFSETSSGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRA+F+DLEPTVIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKE+VDLCLD
Sbjct: 61  HVPRAIFLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLAD C+GLQGFLVF++VGGGTGSG GSLLLERLSVDYGKKSKL F VYPSPQVST+
Sbjct: 121 RVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTH LLEHTDV+ +LDNEAIYD+C+RSLDIERP+Y NLNRL++QVISSLT 
Sbjct: 181 VVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKRSLDIERPSYANLNRLVAQVISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAPVISAEKA+HEQLSVAE+TN+ F+PSS
Sbjct: 241 SLRFDGALNVDITEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFDPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAVIKTKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           +VVPGGDLAKVQRA+CMISN+T++AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE EFSE
Sbjct: 361 SVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEVEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEE 445
           AREDLAALEKDYEEVGAE+ E D  DEE
Sbjct: 421 AREDLAALEKDYEEVGAETAEDDGADEE 448

[Close]

BLAST of Cla001615 vs. TrEMBL
Match: A0A0A0K6A8_CUCSA (Tubulin alpha chain OS=Cucumis sativus GN=Csa_7G070770 PE=3 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 2.7e-251
Identity = 434/448 (96.88%), Postives = 439/448 (97.99%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ----ILNEFLNAGGDDAFNTFFSETGAGK 60
           MRECISIHIGQAGIQVGNACWELYCLEHGIQ    + ++    GGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEE 445
           AREDLAALEKDYEEVGAESGEGDD+D+E
Sbjct: 421 AREDLAALEKDYEEVGAESGEGDDDDQE 448

[Close]

BLAST of Cla001615 vs. TrEMBL
Match: A0A0B2QU58_GLYSO (Tubulin alpha chain OS=Glycine soja GN=glysoja_044493 PE=3 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 3.8e-250
Identity = 431/449 (95.99%), Postives = 437/449 (97.33%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGI----QILNEFLNAGGDDAFNTFFSETGAGK 60
           MRECISIHIGQAGIQVGNACWELYCLEHGI    Q+ ++    GGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAESGEG DEDE+Y
Sbjct: 421 AREDLAALEKDYEEVGAESGEGQDEDEDY 449

[Close]

BLAST of Cla001615 vs. TrEMBL
Match: I1LEC4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G255500 PE=3 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 3.8e-250
Identity = 431/449 (95.99%), Postives = 437/449 (97.33%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGI----QILNEFLNAGGDDAFNTFFSETGAGK 60
           MRECISIHIGQAGIQVGNACWELYCLEHGI    Q+ ++    GGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAESGEG DEDE+Y
Sbjct: 421 AREDLAALEKDYEEVGAESGEGQDEDEDY 449

[Close]

BLAST of Cla001615 vs. TrEMBL
Match: A9PL15_GOSHI (Alpha-tubulin OS=Gossypium hirsutum GN=TUA6 PE=2 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 6.5e-250
Identity = 430/448 (95.98%), Postives = 438/448 (97.77%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ----ILNEFLNAGGDDAFNTFFSETGAGK 60
           MRECIS+HIGQAGIQVGNACWELYCLEHGIQ    + ++    GGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEE 445
           AREDLAALEKDYEEVGAESGEGD+EDE+
Sbjct: 421 AREDLAALEKDYEEVGAESGEGDEEDED 448

[Close]

BLAST of Cla001615 vs. TrEMBL
Match: I1NG45_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G136000 PE=3 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 1.1e-249
Identity = 430/449 (95.77%), Postives = 437/449 (97.33%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGI----QILNEFLNAGGDDAFNTFFSETGAGK 60
           MRECISIHIGQAGIQVGNACWELYCLEHGI    Q+ ++    GGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAESGEG +EDE+Y
Sbjct: 421 AREDLAALEKDYEEVGAESGEGQEEDEDY 449

[Close]

BLAST of Cla001615 vs. NCBI nr
Match: gi|729314101|ref|XP_010531152.1| (PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana])

HSP 1 Score: 837.4 bits (2162), Expect = 1.2e-239
Identity = 410/449 (91.31%), Postives = 428/449 (95.32%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ   ++    + G   DAFNTFFSETGAGK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSV EITN+ FEP+S
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAE G+ +DE EEY
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEDEGEEY 449

[Close]

BLAST of Cla001615 vs. NCBI nr
Match: gi|729328758|ref|XP_010535933.1| (PREDICTED: tubulin alpha-3 chain-like isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 837.0 bits (2161), Expect = 1.5e-239
Identity = 409/449 (91.09%), Postives = 428/449 (95.32%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ   ++    + G   DAFNTFFSETGAGK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSV EITN+ FEP+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAE G+ +DE EEY
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEDEGEEY 449

[Close]

BLAST of Cla001615 vs. NCBI nr
Match: gi|901827255|gb|KMZ76522.1| (Tubulin alpha-1 chain [Zostera marina])

HSP 1 Score: 835.9 bits (2158), Expect = 3.3e-239
Identity = 407/449 (90.65%), Postives = 429/449 (95.55%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE IS+HIGQAGIQVGN+CWELYCLEHGIQ   ++    + G   DAFNTFFSETGAGK
Sbjct: 1   MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDKSVGVAQDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGNYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSV EITN+ FEPSS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAE G+ +D+ E+Y
Sbjct: 421 AREDLAALEKDYEEVGAEGGDEEDDGEDY 449

[Close]

BLAST of Cla001615 vs. NCBI nr
Match: gi|2613143|gb|AAB84298.1| (tubulin [Oryza sativa Indica Group])

HSP 1 Score: 835.5 bits (2157), Expect = 4.4e-239
Identity = 415/447 (92.84%), Postives = 426/447 (95.30%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQILNEFLN----AGGDDAFNTFFSETGAGK 60
           MRECISIHIGQAGIQVGNACWELYCLEHGIQ   +  +     GGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVRTG+YRQ FHPEQLI+GKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGLYRQFFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSL+IERPTYTNLNRL+SQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLEIERPTYTNLNRLVSQVISSLTA 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT FKCGI YQP 
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTVFKCGIIYQPS 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           +VVP GDLAKVQRAV MISNSTSV EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPSGDLAKVQRAVFMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDE 444
           AREDLAALEKD+EEVGAES E +D D+
Sbjct: 421 AREDLAALEKDHEEVGAESDENEDGDD 447

[Close]

BLAST of Cla001615 vs. NCBI nr
Match: gi|1021496683|ref|XP_016191389.1| (PREDICTED: tubulin alpha-3 chain [Arachis ipaensis])

HSP 1 Score: 832.4 bits (2149), Expect = 3.7e-238
Identity = 407/449 (90.65%), Postives = 427/449 (95.10%), Query Frame = 1


Query: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQ---ILNEFLNAG-GDDAFNTFFSETGAGK 60
           MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ   ++    + G   DAFNTFFSETG+GK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSFGVAHDAFNTFFSETGSGK 60

Query: 61  HVPRAVFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
           HVPRAVFVDLEPTVIDEVR G YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRAGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
           R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
           VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRR+LDIERPTYTNLNRLISQ+ISSLT 
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRALDIERPTYTNLNRLISQIISSLTT 240

Query: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
           SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSV EITN+ FEPSS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPSS 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
           MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
           TVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 421 AREDLAALEKDYEEVGAESGEGDDEDEEY 446
           AREDLAALEKDYEEVGAE  E +DE E+Y
Sbjct: 421 AREDLAALEKDYEEVGAEGAEDEDEGEDY 449

The following BLAST results are available for this feature:

BLAST of Cla001615 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TBA5_ARATH	6.7e-240	90.67	Tubulin alpha-5 chain OS=Arabidopsis thaliana GN=TUBA5 PE=1 SV=2	[more]
TBA3_ARATH	6.7e-240	90.67	Tubulin alpha-3 chain OS=Arabidopsis thaliana GN=TUBA3 PE=1 SV=2	[more]
TBA2_ELEIN	5.2e-232	88.57	Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1	[more]
TBA1_ARATH	6.8e-232	87.33	Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1	[more]
TBAE_PHYPO	5.7e-231	85.71	Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1	[more]

BLAST of Cla001615 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A8_CUCSA	2.7e-251	96.88	Tubulin alpha chain OS=Cucumis sativus GN=Csa_7G070770 PE=3 SV=1	[more]
A0A0B2QU58_GLYSO	3.8e-250	95.99	Tubulin alpha chain OS=Glycine soja GN=glysoja_044493 PE=3 SV=1	[more]
I1LEC4_SOYBN	3.8e-250	95.99	Uncharacterized protein OS=Glycine max GN=GLYMA_10G255500 PE=3 SV=1	[more]
A9PL15_GOSHI	6.5e-250	95.98	Alpha-tubulin OS=Gossypium hirsutum GN=TUA6 PE=2 SV=1	[more]
I1NG45_SOYBN	1.1e-249	95.77	Uncharacterized protein OS=Glycine max GN=GLYMA_20G136000 PE=3 SV=1	[more]

BLAST of Cla001615 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|729314101\|ref\|XP_010531152.1\|	1.2e-239	91.31	PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]	[more]
gi\|729328758\|ref\|XP_010535933.1\|	1.5e-239	91.09	PREDICTED: tubulin alpha-3 chain-like isoform X1 [Tarenaya hassleriana]	[more]
gi\|901827255\|gb\|KMZ76522.1\|	3.3e-239	90.65	Tubulin alpha-1 chain [Zostera marina]	[more]
gi\|2613143\|gb\|AAB84298.1\|	4.4e-239	92.84	tubulin [Oryza sativa Indica Group]	[more]
gi\|1021496683\|ref\|XP_016191389.1\|	3.7e-238	90.65	PREDICTED: tubulin alpha-3 chain [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000217	Tubulin
IPR002452	Alpha_tubulin
IPR003008	Tubulin_FtsZ_GTPase
IPR008280	Tub_FtsZ_C
IPR017975	Tubulin_CS
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR023123	Tubulin_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Molecular Function**
Term	Definition
GO:0005200	structural constituent of cytoskeleton
GO:0005525	GTP binding
GO:0003924	GTPase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0051258	protein polymerization
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0090378	seed trichome elongation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
cellular_component	GO:0043234	protein complex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001615	Cla001615.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 49..68 score: 7.8E-92coord: 376..404 score: 7.8E-92coord: 149..170 score: 7.8E-92coord: 10..30 score: 7.8E-92coord: 104..128 score: 7.8E-92coord: 174..187 score: 7.8E-92coord: 188..208 score: 7.8E-92coord: 91..102 score: 7.8E-92coord: 130..148 score: 7.8
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 2..445 score:
IPR002452	Alpha tubulin	PRINTS	PR01162	ALPHATUBULIN	coord: 343..356 score: 4.8E-119coord: 210..222 score: 4.8E-119coord: 381..397 score: 4.8E-119coord: 84..97 score: 4.8E-119coord: 317..338 score: 4.8E-119coord: 18..33 score: 4.8E-119coord: 356..375 score: 4.8E-119coord: 270..285 score: 4.8E-119coord: 157..168 score: 4.8E-119coord: 116..124 score: 4.8E-119coord: 418..434 score: 4.8E-119coord: 144..156 score: 4.8E-119coord: 41..54 score: 4.8E
IPR003008	Tubulin/FtsZ, GTPase domain	GENE3D	G3DSA:3.40.50.1440		coord: 1..264 score: 2.3E
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..209 score: 1.7
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 45..242 score: 1.4
IPR003008	Tubulin/FtsZ, GTPase domain	unknown	SSF52490	Tubulin nucleotide-binding domain-like	coord: 1..240 score: 2.62
IPR008280	Tubulin/FtsZ, C-terminal	unknown	SSF55307	Tubulin C-terminal domain-like	coord: 242..432 score: 9.16
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 138..144 scor
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	GENE3D	G3DSA:3.30.1330.20		coord: 265..379 score: 3.5
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 259..387 score: 1.3
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 244..389 score: 4.9
IPR023123	Tubulin, C-terminal	GENE3D	G3DSA:1.10.287.600		coord: 381..434 score: 5.6
None	No IPR available	unknown	Coil	Coil	coord: 414..434 scor
None	No IPR available	PANTHER	PTHR11588:SF101	TUBULIN ALPHA-2 CHAIN-RELATED	coord: 2..445 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001615	Cla97C02G033980	Watermelon (97103) v2	wmwmbB317
Cla001615	Csa7G070770	Cucumber (Chinese Long) v2	cuwmB605
Cla001615	MELO3C018025	Melon (DHL92) v3.5.1	mewmB537
Cla001615	MELO3C018532	Melon (DHL92) v3.5.1	mewmB240
Cla001615	ClCG02G007140	Watermelon (Charleston Gray)	wcgwmB198
Cla001615	CSPI07G06720	Wild cucumber (PI 183967)	cpiwmB623
Cla001615	Cucsa.219020	Cucumber (Gy14) v1	cgywmB427
Cla001615	CmaCh19G005390	Cucurbita maxima (Rimu)	cmawmB503
Cla001615	CmaCh11G016910	Cucurbita maxima (Rimu)	cmawmB127
Cla001615	CmoCh11G014290	Cucurbita moschata (Rifu)	cmowmB109
Cla001615	CmoCh19G005530	Cucurbita moschata (Rifu)	cmowmB496
Cla001615	Lsi03G006000	Bottle gourd (USVL1VR-Ls)	lsiwmB268
Cla001615	Cp4.1LG04g07530	Cucurbita pepo (Zucchini)	cpewmB665
Cla001615	CsGy7G006270	Cucumber (Gy14) v2	cgybwmB567
Cla001615	MELO3C018025.2	Melon (DHL92) v3.6.1	medwmB522
Cla001615	MELO3C018532.2	Melon (DHL92) v3.6.1	medwmB232
Cla001615	Carg23046	Silver-seed gourd	carwmB0733
Cla001615	CsaV3_7G007680	Cucumber (Chinese Long) v3	cucwmB635

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla001615	Cla006456	Watermelon (97103) v1	wmwmB054

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001615	Cucurbita moschata (Rifu)	cmowmB721
Cla001615	Cucurbita pepo (Zucchini)	cpewmB268
Cla001615	Silver-seed gourd	carwmB0455
Cla001615	Wax gourd	wgowmB279