Cla001604 (gene) Watermelon (97103) v1

Overview
NameCla001604
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNADH oxidoreductase F subunit (AHRD V1 ***- F2TUE3_AJEDA); contains Interpro domain(s) IPR011537 NADH ubiquinone oxidoreductase, F subunit
LocationChr2 : 7908251 .. 7909684 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTATCTTCAACGAACAACATTGGCAAAGAGTTATATTGATCGGTGTGGCATAGGATTGAGGGCGTTTAGCAATCAGAGTGCAGCAGCTACTGGCAATCCTCAGCCTCCCCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGATCGAATCTTTACCAACTTGTACGGTTTACATGATCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTGCTGATTGGATTGTTAATGAAGTAAAGAAGTCTGGCCTCCGTGGTCGTGGAGGTGCTGGTTTTCCATCTGGCCTTAAATGGTCATTCATGCCTAAAGTATCTGATGGCCGTCCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACTTGTAAGGACAGGGAAATCATGCGGCACGATCCACACAAACTCTTGGAGGGTTGTTTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTACATATACATCAGAGGTGAGTATGTGAACGAACGAAAGAATCTTGAGAAGGCAAGAAAAGAGGCTTATGCAGCTGGATTGTTGGGGAAGAATGCTTGTGGATCTGGTTATGATTTTGATGTCCACATCCACTATGGTGCTGGTGCTTACATTTGTGGTGAAGAAACAGCTCTGTTAGAAAGCCTTGAAGGGAAACAAGGGAAACCAAGATTGAAGCCCCCTTTTCCTGCTAATGCAGGATTATATGGATGTCCTACCACTGTGACAAATGTGGAGACAGTGGCTGTTTCCCCTACTATTTTAAGGCGTGGACCAGAATGGTTTGCTAGTTTTGGGAGAAAGAACAACTCTGGTACCAAATTGTTTTGTGTCTCGGGACATGTGAATAAGCCCTGCACTGTTGAAGAGGAAATGAGCATTCCATTAAAGGAATTAATTGAAAGGCACTGTGGTGGGGTTAGAGGTGGATGGGATAACTTGCTTGCTGTAATTCCTGGAGGTTCTTCAGTTCCATTGCTTCCCAAGCATATATGTGATGATGTACTTATGGATTATGATGCATTAAAGGCTGTTCAATCTGGATTGGGCACTGCAGCTGTAATTGTTATGGATAAATCAACTGATATTGTGGATGCTATTGCAAGGCTCTCTTATTTTTACAAGCATGAAAGCTGTGGACAGTGCACTCCCTGCAGAGAAGGTACAGGATGGCTGTGGATGATAATGGAAAGAATGAAAGTTGGAAATGCAAAGCTGGAAGAAATTGACATGCTTCAAGAGGTTACCAAGCAGATTGAAGGGCACACCATTTGTGCCCTTGGTGATGCCGCTGCTTGGCCAGTGCAGGGTCTTATAAAGAATTTTAGGCCTGAGCTTGAGAGAAGGATTAGAGAACGTGCAGAACGGGAGTTGATCCAGGCCGCTGCGTAG

mRNA sequence

ATGCTTTATCTTCAACGAACAACATTGGCAAAGAGTTATATTGATCGGTGTGGCATAGGATTGAGGGCGTTTAGCAATCAGAGTGCAGCAGCTACTGGCAATCCTCAGCCTCCCCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGATCGAATCTTTACCAACTTGTACGGTTTACATGATCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTGCTGATTGGATTGTTAATGAAGTAAAGAAGTCTGGCCTCCGTGGTCGTGGAGGTGCTGGTTTTCCATCTGGCCTTAAATGGTCATTCATGCCTAAAGTATCTGATGGCCGTCCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACTTGTAAGGACAGGGAAATCATGCGGCACGATCCACACAAACTCTTGGAGGGTTGTTTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTACATATACATCAGAGGTGAGTATGTGAACGAACGAAAGAATCTTGAGAAGGCAAGAAAAGAGGCTTATGCAGCTGGATTGTTGGGGAAGAATGCTTGTGGATCTGGTTATGATTTTGATGTCCACATCCACTATGGTGCTGGTGCTTACATTTGTGGTGAAGAAACAGCTCTGTTAGAAAGCCTTGAAGGGAAACAAGGGAAACCAAGATTGAAGCCCCCTTTTCCTGCTAATGCAGGATTATATGGATGTCCTACCACTGTGACAAATGTGGAGACAGTGGCTGTTTCCCCTACTATTTTAAGGCGTGGACCAGAATGGTTTGCTAGTTTTGGGAGAAAGAACAACTCTGGTACCAAATTGTTTTGTGTCTCGGGACATGTGAATAAGCCCTGCACTGTTGAAGAGGAAATGAGCATTCCATTAAAGGAATTAATTGAAAGGCACTGTGGTGGGGTTAGAGGTGGATGGGATAACTTGCTTGCTGTAATTCCTGGAGGTTCTTCAGTTCCATTGCTTCCCAAGCATATATGTGATGATGTACTTATGGATTATGATGCATTAAAGGCTGTTCAATCTGGATTGGGCACTGCAGCTGTAATTGTTATGGATAAATCAACTGATATTGTGGATGCTATTGCAAGGCTCTCTTATTTTTACAAGCATGAAAGCTGTGGACAGTGCACTCCCTGCAGAGAAGGTACAGGATGGCTGTGGATGATAATGGAAAGAATGAAAGTTGGAAATGCAAAGCTGGAAGAAATTGACATGCTTCAAGAGGTTACCAAGCAGATTGAAGGGCACACCATTTGTGCCCTTGGTGATGCCGCTGCTTGGCCAGTGCAGGGTCTTATAAAGAATTTTAGGCCTGAGCTTGAGAGAAGGATTAGAGAACGTGCAGAACGGGAGTTGATCCAGGCCGCTGCGTAG

Coding sequence (CDS)

ATGCTTTATCTTCAACGAACAACATTGGCAAAGAGTTATATTGATCGGTGTGGCATAGGATTGAGGGCGTTTAGCAATCAGAGTGCAGCAGCTACTGGCAATCCTCAGCCTCCCCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGATCGAATCTTTACCAACTTGTACGGTTTACATGATCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTGCTGATTGGATTGTTAATGAAGTAAAGAAGTCTGGCCTCCGTGGTCGTGGAGGTGCTGGTTTTCCATCTGGCCTTAAATGGTCATTCATGCCTAAAGTATCTGATGGCCGTCCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACTTGTAAGGACAGGGAAATCATGCGGCACGATCCACACAAACTCTTGGAGGGTTGTTTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTACATATACATCAGAGGTGAGTATGTGAACGAACGAAAGAATCTTGAGAAGGCAAGAAAAGAGGCTTATGCAGCTGGATTGTTGGGGAAGAATGCTTGTGGATCTGGTTATGATTTTGATGTCCACATCCACTATGGTGCTGGTGCTTACATTTGTGGTGAAGAAACAGCTCTGTTAGAAAGCCTTGAAGGGAAACAAGGGAAACCAAGATTGAAGCCCCCTTTTCCTGCTAATGCAGGATTATATGGATGTCCTACCACTGTGACAAATGTGGAGACAGTGGCTGTTTCCCCTACTATTTTAAGGCGTGGACCAGAATGGTTTGCTAGTTTTGGGAGAAAGAACAACTCTGGTACCAAATTGTTTTGTGTCTCGGGACATGTGAATAAGCCCTGCACTGTTGAAGAGGAAATGAGCATTCCATTAAAGGAATTAATTGAAAGGCACTGTGGTGGGGTTAGAGGTGGATGGGATAACTTGCTTGCTGTAATTCCTGGAGGTTCTTCAGTTCCATTGCTTCCCAAGCATATATGTGATGATGTACTTATGGATTATGATGCATTAAAGGCTGTTCAATCTGGATTGGGCACTGCAGCTGTAATTGTTATGGATAAATCAACTGATATTGTGGATGCTATTGCAAGGCTCTCTTATTTTTACAAGCATGAAAGCTGTGGACAGTGCACTCCCTGCAGAGAAGGTACAGGATGGCTGTGGATGATAATGGAAAGAATGAAAGTTGGAAATGCAAAGCTGGAAGAAATTGACATGCTTCAAGAGGTTACCAAGCAGATTGAAGGGCACACCATTTGTGCCCTTGGTGATGCCGCTGCTTGGCCAGTGCAGGGTCTTATAAAGAATTTTAGGCCTGAGCTTGAGAGAAGGATTAGAGAACGTGCAGAACGGGAGTTGATCCAGGCCGCTGCGTAG

Protein sequence

MLYLQRTTLAKSYIDRCGIGLRAFSNQSAAATGNPQPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA
Homology
[Close]
BLAST of Cla001604 vs. Swiss-Prot
Match: NDUV1_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium discoideum GN=ndufv1 PE=2 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 6.8e-198
Identity = 323/422 (76.54%), Postives = 371/422 (87.91%), Query Frame = 1 

Query: 46  FGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGA 105
           +GGLKD+DRIFTNLYG HD +LKGA+ RGDWY+TK+++ KG DWI+ E+  SGLRGRGGA
Sbjct: 48  YGGLKDKDRIFTNLYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRGRGGA 107

Query: 106 GFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMR 165
           GFPSGLKWSFMPK  S  RP YLV+NADE EPGTCKDREIMRHDPHKL+EGCL+AG  MR
Sbjct: 108 GFPSGLKWSFMPKTTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAGFAMR 167

Query: 166 ATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEET 225
           A AAYIYIRGE+  E K LE+A  EAY AGL+G+NACG+GY FDV++H GAGAYICGEET
Sbjct: 168 ACAAYIYIRGEFHYEAKVLEQAIDEAYKAGLIGENACGTGYKFDVYVHRGAGAYICGEET 227

Query: 226 ALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNN 285
           AL+ES+EGKQGKPRLKPPFPA AGLYGCPTTVTNVETVAV+PTILRRG  WFASFGR  N
Sbjct: 228 ALIESIEGKQGKPRLKPPFPAMAGLYGCPTTVTNVETVAVAPTILRRGGAWFASFGRPKN 287

Query: 286 SGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKH 345
           +GTKLFC+SGHVN PCTVEEEMSIPL+ELI++HCGGV GGWDNL  VIPGGSSVP+LPK+
Sbjct: 288 AGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWDNLKGVIPGGSSVPVLPKN 347

Query: 346 ICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTG 405
           ICD+VLMD+D L+  +SGLGTAAVIVM+K TD++ AIARLS FYKHESCGQCTPCREG G
Sbjct: 348 ICDNVLMDFDDLRQHRSGLGTAAVIVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVG 407

Query: 406 WLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRI 465
           WL+ I +R+  GNAK +EID L+E+++QIEGHTICALGDAAAWPVQGLI++FRPE+E RI
Sbjct: 408 WLYDITDRLVTGNAKPDEIDSLEEISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRI 467

Query: 466 RE 467
           ++
Sbjct: 468 KQ 469

[Close]
BLAST of Cla001604 vs. Swiss-Prot
Match: NDUV1_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus GN=NDUFV1 PE=1 SV=2)

HSP 1 Score: 689.5 bits (1778), Expect = 2.6e-197
Identity = 327/437 (74.83%), Postives = 369/437 (84.44%), Query Frame = 1 

Query: 41  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 100
           P+KT FG LKDEDRIFTNLYG HD  LKGA  RGDWY+TK+++LKG DWI+ EVK SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86

Query: 101 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 160
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146

Query: 161 VGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 220
             M A AAYIYIRGE+ NE  NL+ A +EAY AGL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 221 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 280
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266

Query: 281 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPL 340
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 341 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 400
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 401 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 460
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 461 ERRIRERAERELIQAAA 478
           E R+++ A++   + AA
Sbjct: 447 EERMQQFAQQHQARQAA 463

[Close]
BLAST of Cla001604 vs. Swiss-Prot
Match: NDUV1_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus GN=NDUFV1 PE=2 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 5.8e-197
Identity = 326/437 (74.60%), Postives = 368/437 (84.21%), Query Frame = 1 

Query: 41  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 100
           P+KT FG LKDEDRIFTNLYG HD  LKGA+ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 101 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 160
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146

Query: 161 VGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 220
             M A AAYIYIRGE+ NE  NL+ A +EAY AGL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 221 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 280
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 281 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPL 340
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNYPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 341 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 400
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 401 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 460
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 461 ERRIRERAERELIQAAA 478
           E R++  A++   Q AA
Sbjct: 447 EERMQRFAQQHQAQQAA 463

[Close]
BLAST of Cla001604 vs. Swiss-Prot
Match: NDUV1_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN=NDUFV1 PE=1 SV=4)

HSP 1 Score: 688.0 bits (1774), Expect = 7.6e-197
Identity = 325/437 (74.37%), Postives = 368/437 (84.21%), Query Frame = 1 

Query: 41  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 100
           P+KT FG LKDEDRIFTNLYG HD  LKG++ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 101 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 160
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 146

Query: 161 VGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 220
             M A AAYIYIRGE+ NE  NL+ A +EAY AGL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 221 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 280
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 281 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPL 340
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 341 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 400
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 401 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 460
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 461 ERRIRERAERELIQAAA 478
           E R++  A++   + AA
Sbjct: 447 EERMQRFAQQHQARQAA 463

[Close]
BLAST of Cla001604 vs. Swiss-Prot
Match: NDUV1_PANTR (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pan troglodytes GN=NDUFV1 PE=2 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 1.7e-196
Identity = 324/437 (74.14%), Postives = 368/437 (84.21%), Query Frame = 1 

Query: 41  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 100
           P+KT FG LKDEDRIFTNLYG HD  LKG++ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 101 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 160
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGG 146

Query: 161 VGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 220
             M A AAYIYIRGE+ NE  NL+ A +EAY AGL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 221 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 280
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 281 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPL 340
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 341 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 400
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 401 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 460
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 461 ERRIRERAERELIQAAA 478
           E R++  A++   + AA
Sbjct: 447 EERMQRFAQQHQARQAA 463

[Close]
BLAST of Cla001604 vs. TrEMBL
Match: J3MNJ2_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 2.4e-258
Identity = 428/459 (93.25%), Postives = 447/459 (97.39%), Query Frame = 1 

Query: 22  RAFSNQSAAATGNPQPPP---PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYR 81
           ++FS Q+A  +  PQPPP   PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDW+R
Sbjct: 46  KSFSTQAATTSSTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWHR 105

Query: 82  TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 141
           TKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 106 TKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 165

Query: 142 CKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGK 201
           CKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIYIRGEYVNER NL KAR+EAY AGLLGK
Sbjct: 166 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLLKAREEAYGAGLLGK 225

Query: 202 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 261
           NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 226 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 285

Query: 262 VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHC 321
           VETVAVSPTILRRGPEWFASFGRKNNSGTKL+C+SGHVNKPCTVEEEMSIPLKELIE+HC
Sbjct: 286 VETVAVSPTILRRGPEWFASFGRKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHC 345

Query: 322 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIV 381
           GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTD+V
Sbjct: 346 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 405

Query: 382 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTI 441
           DAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+K+GNAKLEEIDMLQEVTKQIEGHTI
Sbjct: 406 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKIGNAKLEEIDMLQEVTKQIEGHTI 465

Query: 442 CALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           CALGDAAAWPVQGLI++FRPELERRIRERAEREL+ A+A
Sbjct: 466 CALGDAAAWPVQGLIRHFRPELERRIRERAERELLAASA 504

[Close]
BLAST of Cla001604 vs. TrEMBL
Match: K4BBN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 894.4 bits (2310), Expect = 5.9e-257
Identity = 430/480 (89.58%), Postives = 455/480 (94.79%), Query Frame = 1 

Query: 1   MLYLQRTTLAKSYIDRCGIGLRAFSNQSAAATGNPQP---PPPPEKTHFGGLKDEDRIFT 60
           +L LQRT LA+   +R G   R FS Q+A+    PQP   PPPPE+THFGGLKDEDRIFT
Sbjct: 7   LLSLQRTALAQRSSERWGQYGRLFSTQAASTASTPQPTPPPPPPERTHFGGLKDEDRIFT 66

Query: 61  NLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120
           NLYGLHDP+LKGAMKRGDWYRTKDLV+KG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 67  NLYGLHDPYLKGAMKRGDWYRTKDLVIKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMP 126

Query: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180
           K +DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA AAYIYIRGEYV
Sbjct: 127 KTTDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRARAAYIYIRGEYV 186

Query: 181 NERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240
           NER +L+KAR+EAY AGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLEGKQGKP
Sbjct: 187 NERLSLQKARQEAYEAGLLGKNACGSGYDFDVYIHFGAGAYICGEETALLESLEGKQGKP 246

Query: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300
           RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNN+GTKLFC+SGHVN
Sbjct: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLFCISGHVN 306

Query: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360
           KPCTVEEEMSI LKEL+ERHCGGVRGGWDNLLAVIPGGSSVPLLPK+IC+DVLMD+DALK
Sbjct: 307 KPCTVEEEMSISLKELLERHCGGVRGGWDNLLAVIPGGSSVPLLPKNICEDVLMDFDALK 366

Query: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420
           AVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN
Sbjct: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 426

Query: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRE AEREL QAAA
Sbjct: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIREHAERELQQAAA 486

[Close]
BLAST of Cla001604 vs. TrEMBL
Match: W1NGA0_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00010p00264240 PE=4 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 2.8e-254
Identity = 424/480 (88.33%), Postives = 449/480 (93.54%), Query Frame = 1 

Query: 1   MLYLQRTTLAKSYIDRCGIGLRAFSNQSAAATGNPQ---PPPPPEKTHFGGLKDEDRIFT 60
           +L L R++L       C    R  + Q+   +  PQ   PPPPPEKTHFGGLKDEDRIFT
Sbjct: 4   LLSLPRSSLTHHCRKSCKPFYRYLNTQAPTTSSTPQLPPPPPPPEKTHFGGLKDEDRIFT 63

Query: 61  NLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120
           NLYG+HDPFLKGAMKRGDW RTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 64  NLYGMHDPFLKGAMKRGDWCRTKDLVLKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMP 123

Query: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180
           KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV MRA+AAYIYIRGEYV
Sbjct: 124 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVAMRASAAYIYIRGEYV 183

Query: 181 NERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240
           NER NL KARKEAY AGLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKP
Sbjct: 184 NERLNLLKARKEAYEAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKP 243

Query: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300
           RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWF SFGRKNNSGTKLFC+SGHVN
Sbjct: 244 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFVSFGRKNNSGTKLFCISGHVN 303

Query: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360
           KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLA+IPGGSSVPLLPK+ICDDVLMD+DALK
Sbjct: 304 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLLPKNICDDVLMDFDALK 363

Query: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420
           AVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWM+MER+KVGN
Sbjct: 364 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMMMERLKVGN 423

Query: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           AKLEEIDMLQE+TKQIEGHTICALGDAAAWPVQGLI++FRPELERRIR RAEREL+++A+
Sbjct: 424 AKLEEIDMLQEITKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRSRAERELLESAS 483

[Close]
BLAST of Cla001604 vs. TrEMBL
Match: W1NZX4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00002p00015430 PE=4 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 3.6e-254
Identity = 423/480 (88.12%), Postives = 452/480 (94.17%), Query Frame = 1 

Query: 1   MLYLQRTTLAKSYIDRCGIGLRAFSNQSAAATGNPQPP---PPPEKTHFGGLKDEDRIFT 60
           +L   R++L + Y        R+FS Q+   +  PQPP   PPPEKTHFGGLKDEDRIFT
Sbjct: 4   LLSFPRSSLTQHYSKGLVPFNRSFSTQAPTTSSTPQPPSPPPPPEKTHFGGLKDEDRIFT 63

Query: 61  NLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120
           NLYG++DPFLKGAMKRGDWY+TKDL+LKG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 64  NLYGINDPFLKGAMKRGDWYQTKDLILKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMP 123

Query: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180
           KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIYIRGEYV
Sbjct: 124 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 183

Query: 181 NERKNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240
           NER NL KARKEAY  GLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKP
Sbjct: 184 NERLNLLKARKEAYEVGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKP 243

Query: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300
           RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC+SGHVN
Sbjct: 244 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCISGHVN 303

Query: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360
           KPCTVEEEMSIPLKELIERHC GVRGGWDNLLA+IPGGSSVPLLPK ICDD+LMD+DALK
Sbjct: 304 KPCTVEEEMSIPLKELIERHCKGVRGGWDNLLAIIPGGSSVPLLPKDICDDLLMDFDALK 363

Query: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420
           AVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGN
Sbjct: 364 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 423

Query: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRI++RA+REL+++AA
Sbjct: 424 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKDRAQRELLESAA 483

[Close]
BLAST of Cla001604 vs. TrEMBL
Match: A0A0K9PKP8_ZOSMR (NADH oxidoreductase F subunit OS=Zostera marina GN=ZOSMA_20G00100 PE=4 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 2.0e-252
Identity = 419/476 (88.03%), Postives = 449/476 (94.33%), Query Frame = 1 

Query: 2   LYLQRTTLA-KSYIDRCGIGLRAFSNQSAAATGNPQPPPPPEKTHFGGLKDEDRIFTNLY 61
           L+  R TLA + YI+      R+FS Q+ +    P P PPPEKTHFG LKDEDRIFTNL+
Sbjct: 5   LFRPRETLAYRRYIEFFDKSRRSFSTQAKSQVEPPPPSPPPEKTHFGNLKDEDRIFTNLH 64

Query: 62  GLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS 121
           G+ +P+LKGA++RGDWYRTKDLVLKG+DWIV+E+KKSGLRGRGGAGFPSGLKWSFMPKVS
Sbjct: 65  GVFNPYLKGAVQRGDWYRTKDLVLKGSDWIVDEMKKSGLRGRGGAGFPSGLKWSFMPKVS 124

Query: 122 DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNER 181
           DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+A YIYIRGEYVNER
Sbjct: 125 DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAGYIYIRGEYVNER 184

Query: 182 KNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLK 241
           KNLEKARKEAY AGLLGKNACGSGYDFDV+IHYGAGAYICGEETALLESLEGKQGKPRLK
Sbjct: 185 KNLEKARKEAYKAGLLGKNACGSGYDFDVYIHYGAGAYICGEETALLESLEGKQGKPRLK 244

Query: 242 PPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPC 301
           PPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC+SGHVNKPC
Sbjct: 245 PPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCISGHVNKPC 304

Query: 302 TVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQ 361
           TVEEEMSIPLKEL+ERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDV+MD+DALKAV+
Sbjct: 305 TVEEEMSIPLKELLERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVMMDFDALKAVE 364

Query: 362 SGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKL 421
           SGLGTA VIV+DKS D+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGNAKL
Sbjct: 365 SGLGTAGVIVLDKSCDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKL 424

Query: 422 EEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAA 477
           EEIDMLQE+TKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAE+EL + A
Sbjct: 425 EEIDMLQEITKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAEKELAEVA 480

[Close]
BLAST of Cla001604 vs. NCBI nr
Match: gi|672160363|ref|XP_008799961.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 905.2 bits (2338), Expect = 4.8e-260
Identity = 433/467 (92.72%), Postives = 449/467 (96.15%), Query Frame = 1 

Query: 14  IDRCGIGLRAFSNQSAAATGNPQPPP---PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGA 73
           IDR     R+FS Q+A     PQPPP   PPEKTHFGGLKDEDRIFTNLYGLHDP LKGA
Sbjct: 56  IDRFNSAYRSFSTQAATTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPLLKGA 115

Query: 74  MKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 133
           MKRGDWYRTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN
Sbjct: 116 MKRGDWYRTKDLVLKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 175

Query: 134 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEA 193
           ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNER  LEKAR+EA
Sbjct: 176 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERLTLEKARREA 235

Query: 194 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 253
           Y AGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY
Sbjct: 236 YQAGLLGKNACGSGYDFDVYIHHGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 295

Query: 254 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 313
           GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC+SGHVNKPCTVEEEMSIPL
Sbjct: 296 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCISGHVNKPCTVEEEMSIPL 355

Query: 314 KELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 373
           KELIERHCGG+RGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV
Sbjct: 356 KELIERHCGGIRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 415

Query: 374 MDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVT 433
           MDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGNAKLEEIDMLQEVT
Sbjct: 416 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 475

Query: 434 KQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           KQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAE+EL++AAA
Sbjct: 476 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAEKELLEAAA 522

[Close]
BLAST of Cla001604 vs. NCBI nr
Match: gi|672160361|ref|XP_008799960.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 905.2 bits (2338), Expect = 4.8e-260
Identity = 433/467 (92.72%), Postives = 449/467 (96.15%), Query Frame = 1 

Query: 14  IDRCGIGLRAFSNQSAAATGNPQPPP---PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGA 73
           IDR     R+FS Q+A     PQPPP   PPEKTHFGGLKDEDRIFTNLYGLHDP LKGA
Sbjct: 64  IDRFNSAYRSFSTQAATTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPLLKGA 123

Query: 74  MKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 133
           MKRGDWYRTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN
Sbjct: 124 MKRGDWYRTKDLVLKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 183

Query: 134 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEA 193
           ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNER  LEKAR+EA
Sbjct: 184 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERLTLEKARREA 243

Query: 194 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 253
           Y AGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY
Sbjct: 244 YQAGLLGKNACGSGYDFDVYIHHGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 303

Query: 254 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 313
           GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC+SGHVNKPCTVEEEMSIPL
Sbjct: 304 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCISGHVNKPCTVEEEMSIPL 363

Query: 314 KELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 373
           KELIERHCGG+RGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV
Sbjct: 364 KELIERHCGGIRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 423

Query: 374 MDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVT 433
           MDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGNAKLEEIDMLQEVT
Sbjct: 424 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 483

Query: 434 KQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           KQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAE+EL++AAA
Sbjct: 484 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAEKELLEAAA 530

[Close]
BLAST of Cla001604 vs. NCBI nr
Match: gi|672160367|ref|XP_008799963.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 905.2 bits (2338), Expect = 4.8e-260
Identity = 433/467 (92.72%), Postives = 449/467 (96.15%), Query Frame = 1 

Query: 14  IDRCGIGLRAFSNQSAAATGNPQPPP---PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGA 73
           IDR     R+FS Q+A     PQPPP   PPEKTHFGGLKDEDRIFTNLYGLHDP LKGA
Sbjct: 21  IDRFNSAYRSFSTQAATTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPLLKGA 80

Query: 74  MKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 133
           MKRGDWYRTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN
Sbjct: 81  MKRGDWYRTKDLVLKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 140

Query: 134 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEA 193
           ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNER  LEKAR+EA
Sbjct: 141 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERLTLEKARREA 200

Query: 194 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 253
           Y AGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY
Sbjct: 201 YQAGLLGKNACGSGYDFDVYIHHGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 260

Query: 254 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 313
           GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC+SGHVNKPCTVEEEMSIPL
Sbjct: 261 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCISGHVNKPCTVEEEMSIPL 320

Query: 314 KELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 373
           KELIERHCGG+RGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV
Sbjct: 321 KELIERHCGGIRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 380

Query: 374 MDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVT 433
           MDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGNAKLEEIDMLQEVT
Sbjct: 381 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 440

Query: 434 KQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           KQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAE+EL++AAA
Sbjct: 441 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAEKELLEAAA 487

[Close]
BLAST of Cla001604 vs. NCBI nr
Match: gi|672160365|ref|XP_008799962.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 905.2 bits (2338), Expect = 4.8e-260
Identity = 433/467 (92.72%), Postives = 449/467 (96.15%), Query Frame = 1 

Query: 14  IDRCGIGLRAFSNQSAAATGNPQPPP---PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGA 73
           IDR     R+FS Q+A     PQPPP   PPEKTHFGGLKDEDRIFTNLYGLHDP LKGA
Sbjct: 35  IDRFNSAYRSFSTQAATTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPLLKGA 94

Query: 74  MKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 133
           MKRGDWYRTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN
Sbjct: 95  MKRGDWYRTKDLVLKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 154

Query: 134 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEA 193
           ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNER  LEKAR+EA
Sbjct: 155 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERLTLEKARREA 214

Query: 194 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 253
           Y AGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY
Sbjct: 215 YQAGLLGKNACGSGYDFDVYIHHGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 274

Query: 254 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 313
           GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC+SGHVNKPCTVEEEMSIPL
Sbjct: 275 GCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCISGHVNKPCTVEEEMSIPL 334

Query: 314 KELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 373
           KELIERHCGG+RGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV
Sbjct: 335 KELIERHCGGIRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 394

Query: 374 MDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVT 433
           MDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGNAKLEEIDMLQEVT
Sbjct: 395 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 454

Query: 434 KQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           KQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAE+EL++AAA
Sbjct: 455 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAEKELLEAAA 501

[Close]
BLAST of Cla001604 vs. NCBI nr
Match: gi|694998322|ref|XP_009403957.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 904.0 bits (2335), Expect = 1.1e-259
Identity = 432/459 (94.12%), Postives = 446/459 (97.17%), Query Frame = 1 

Query: 22  RAFSNQSAAATGNPQPPP---PPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYR 81
           R+FS Q+A     PQPPP   PPEKTHFGGLKDEDRIFTNLYGLHDP LKGAMKRGDWYR
Sbjct: 50  RSFSTQTATTGSTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPLLKGAMKRGDWYR 109

Query: 82  TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 141
           TKDLV+KG+DWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 110 TKDLVVKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 169

Query: 142 CKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEAYAAGLLGK 201
           CKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY+RGEYVNER  LEKARKEAY AGLLGK
Sbjct: 170 CKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYVRGEYVNERLTLEKARKEAYQAGLLGK 229

Query: 202 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 261
           NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 230 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 289

Query: 262 VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHC 321
           VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHC
Sbjct: 290 VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHC 349

Query: 322 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIV 381
           GGVRGGWDNLLAVIPGGSSVPLLPKHICDDV+MDYDALKAVQSGLGTAAVIVMDKSTD+V
Sbjct: 350 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVMMDYDALKAVQSGLGTAAVIVMDKSTDVV 409

Query: 382 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTI 441
           DAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGNAKLEEIDMLQEVTKQIEGHTI
Sbjct: 410 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 469

Query: 442 CALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 478
           CALGDAAAWPVQGLI++FRPELERRIRERAEREL++AAA
Sbjct: 470 CALGDAAAWPVQGLIRHFRPELERRIRERAERELLEAAA 508

The following BLAST results are available for this feature:
BLAST of Cla001604 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDUV1_DICDI6.8e-19876.54NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium d... [more]
NDUV1_BOVIN2.6e-19774.83NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus GN=N... [more]
NDUV1_PONPY5.8e-19774.60NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus ... [more]
NDUV1_HUMAN7.6e-19774.37NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN... [more]
NDUV1_PANTR1.7e-19674.14NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pan troglodytes... [more]
BLAST of Cla001604 vs. TrEMBL
Match NameE-valueIdentityDescription
J3MNJ2_ORYBR2.4e-25893.25Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
K4BBN1_SOLLC5.9e-25789.58Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
W1NGA0_AMBTC2.8e-25488.33Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00010p00264240 PE=4 SV=... [more]
W1NZX4_AMBTC3.6e-25488.13Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00002p00015430 PE=4 SV=... [more]
A0A0K9PKP8_ZOSMR2.0e-25288.03NADH oxidoreductase F subunit OS=Zostera marina GN=ZOSMA_20G00100 PE=4 SV=1[more]
BLAST of Cla001604 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|672160363|ref|XP_008799961.1|4.8e-26092.72PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|672160361|ref|XP_008799960.1|4.8e-26092.72PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|672160367|ref|XP_008799963.1|4.8e-26092.72PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|672160365|ref|XP_008799962.1|4.8e-26092.72PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|694998322|ref|XP_009403957.1|1.1e-25994.12PREDICTED: NADH dehydrogenase [ubiquinone][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001949NADH-UbQ_OxRdtase_51kDa_CS
IPR011537NADH-UbQ_OxRdtase_suF
IPR011538Nuo51_FMN-bd
IPR019554Soluble_ligand-bd
IPR019575Nuop51_4Fe4S-bd
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0010181FMN binding
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016049 cell growth
biological_process GO:0051788 response to misfolded protein
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0015992 proton transport
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0048193 Golgi vesicle transport
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005575 cellular_component
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU30074watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU32615watermelon EST collection version 2.0transcribed_cluster
WMU50487watermelon EST collection version 2.0transcribed_cluster
WMU61815watermelon EST collection version 2.0transcribed_cluster
WMU67016watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001604Cla001604.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU67016WMU67016transcribed_cluster
WMU30074WMU30074transcribed_cluster
WMU50487WMU50487transcribed_cluster
WMU61815WMU61815transcribed_cluster
WMU32615WMU32615transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved sitePROSITEPS00644COMPLEX1_51K_1coord: 214..229
scor
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved sitePROSITEPS00645COMPLEX1_51K_2coord: 391..402
scor
IPR011537NADH ubiquinone oxidoreductase, F subunitTIGRFAMsTIGR01959TIGR01959coord: 55..464
score: 1.6E
IPR011538NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domainPFAMPF01512Complex1_51Kcoord: 94..263
score: 1.8
IPR019554Soluble ligand binding domainPFAMPF10531SLBBcoord: 290..339
score: 4.
IPR019575NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domainPFAMPF10589NADH_4Fe-4Scoord: 380..462
score: 2.7
IPR019575NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domainSMARTSM00928NADH_4Fe_4S_2coord: 378..423
score: 8.3
NoneNo IPR availablePANTHERPTHR11780NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1coord: 36..477
score:
NoneNo IPR availableunknownSSF140490Nqo1C-terminal domain-likecoord: 374..467
score: 1.44
NoneNo IPR availableunknownSSF142019Nqo1 FMN-binding domain-likecoord: 52..287
score: 1.02
NoneNo IPR availableunknownSSF142984Nqo1 middle domain-likecoord: 288..373
score: 3.92