Cla001591 (gene) Watermelon (97103) v1

Overview
NameCla001591
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAcid phosphatase/vanadium-dependent haloperoxidase-related protein (AHRD V1 ***- Q8L7M6_ARATH); contains Interpro domain(s) IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase related
LocationChr2 : 15820055 .. 15820480 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGGTGATGACGGTTGGGGATGCAGCCTCATCTTCCATTAAAACGTTGCCGGCTCCTTTGCTCGCTTCCAATCTCCCCCTCCTCTCCGCCTTCCTTGCTGGCGCCATCGCCCAGTTTCTCAAGCTCTTTACCACTTGGTACCCTTTCTCTGCTCTCATGATCTTTCCTATTGCCAGTTCTGTCTACATTTCTCCATGATCCGAGGGATCCAGAGCTTATAATTTGTTGTGTTTTGGTTTCTGGACTCTTAGGTACAAGGAAAGAAAATGGGAATCTAAGCGGATGCTTGATTCTGGCGGGATGCCATCGTCTCACTCTGCAACTGTGACTGCTTTGGCCGTTGCTATTGCCCTCCAAGAAGGATCCGGAGGACCTGCTTTTGCCATCGCCCTGGTCTTTGCATGTGTTGTATGTGCTTGA

mRNA sequence

ATGGACGAGGTGATGACGGTTGGGGATGCAGCCTCATCTTCCATTAAAACGTTGCCGGCTCCTTTGCTCGCTTCCAATCTCCCCCTCCTCTCCGCCTTCCTTGCTGGCGCCATCGCCCAGTTTCTCAAGCTCTTTACCACTTGGTACAAGGAAAGAAAATGGGAATCTAAGCGGATGCTTGATTCTGGCGGGATGCCATCGTCTCACTCTGCAACTGTGACTGCTTTGGCCGTTGCTATTGCCCTCCAAGAAGGATCCGGAGGACCTGCTTTTGCCATCGCCCTGGTCTTTGCATGTGTTGTATGTGCTTGA

Coding sequence (CDS)

ATGGACGAGGTGATGACGGTTGGGGATGCAGCCTCATCTTCCATTAAAACGTTGCCGGCTCCTTTGCTCGCTTCCAATCTCCCCCTCCTCTCCGCCTTCCTTGCTGGCGCCATCGCCCAGTTTCTCAAGCTCTTTACCACTTGGTACAAGGAAAGAAAATGGGAATCTAAGCGGATGCTTGATTCTGGCGGGATGCCATCGTCTCACTCTGCAACTGTGACTGCTTTGGCCGTTGCTATTGCCCTCCAAGAAGGATCCGGAGGACCTGCTTTTGCCATCGCCCTGGTCTTTGCATGTGTTGTATGTGCTTGA

Protein sequence

MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRMLDSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVVCA
Homology
[Close]
BLAST of Cla001591 vs. Swiss-Prot
Match: YUID_BACSU (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-09
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1 

Query: 23  LASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRMLDSGGMPSSHSATVTALAVAIAL 82
           L +N PLLS+  A   AQ +K+   +   RK +   +  +GGMPSSHSA VTAL+  +AL
Sbjct: 3   LLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVAL 62

Query: 83  QEGSGGPAFAIALVFACV 101
           + G     FA++ +FA +
Sbjct: 63  EHGLDSSLFAVSAIFAVI 80

[Close]
BLAST of Cla001591 vs. TrEMBL
Match: A0A0A0LT60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416120 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-37
Identity = 88/101 (87.13%), Postives = 89/101 (88.12%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEVMTVGDAASSSIKT P P LASNLPLLSAFLAGAIAQ        YKERKWESKRML
Sbjct: 1   MDEVMTVGDAASSSIKTSPGPFLASNLPLLSAFLAGAIAQ--------YKERKWESKRML 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           DSGGMPSSHSATV+ALAVAIA QEGSGGPAFAIALVFACVV
Sbjct: 61  DSGGMPSSHSATVSALAVAIAFQEGSGGPAFAIALVFACVV 93

[Close]
BLAST of Cla001591 vs. TrEMBL
Match: V4UEY4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016908mg PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-32
Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 1 

Query: 1   MDEVMTVGDAAS----SSIKTLPAPLLAS------NLPLLSAFLAGAIAQFLKLFTTWYK 60
           MDEV+TVGDAAS     +   L +P  +S      NLPL+SAFLA A+AQFLK+FTTWYK
Sbjct: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60

Query: 61  ERKWESKRMLDSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVVCA 104
           E++W+SK+MLDSGGMPSSHSATV+ALAVAI LQEGSG P+FAIA+V AC+VC+
Sbjct: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVCS 113

[Close]
BLAST of Cla001591 vs. TrEMBL
Match: B9IAH9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s15420g PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-32
Identity = 72/96 (75.00%), Postives = 83/96 (86.46%), Query Frame = 1 

Query: 6   TVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRMLDSGGM 65
           T+  ++SSS  + PAPLL  NLPLLSA LA A+AQFLKLFTTWYKE++W+SKRMLDSGGM
Sbjct: 18  TITTSSSSSSSSSPAPLLPYNLPLLSALLACALAQFLKLFTTWYKEKRWDSKRMLDSGGM 77

Query: 66  PSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           PSSHSATVTALAVA+ LQEG+G PAFAI +V ACVV
Sbjct: 78  PSSHSATVTALAVAVGLQEGTGSPAFAIVVVLACVV 113

[Close]
BLAST of Cla001591 vs. TrEMBL
Match: M5WI19_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012498mg PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.7e-32
Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEV+T  DA+S+   +    ++ SNLPLLSAFL+ A+AQFLKLFTTWYKE++W+S+RML
Sbjct: 1   MDEVITAADASSNGSTSSQTSIIPSNLPLLSAFLSFALAQFLKLFTTWYKEKRWDSRRML 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
            SGGMPSSHSATVTALAVAI  QEG+GG AFAIA+V ACVV
Sbjct: 61  GSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVV 101

[Close]
BLAST of Cla001591 vs. TrEMBL
Match: A0A151RM78_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_034943 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.8e-32
Identity = 69/101 (68.32%), Postives = 84/101 (83.17%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEVMT+ D  +S+        L SNLPL SAFL+ A+AQFLK+FTTWYKE++W+SKR+L
Sbjct: 1   MDEVMTMADVTASTHSASTPSSLPSNLPLFSAFLSFALAQFLKIFTTWYKEKRWDSKRLL 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           DSGGMPSSHSATV+ALAVAI LQEG+G PAFA+A+V AC+V
Sbjct: 61  DSGGMPSSHSATVSALAVAIGLQEGAGSPAFAVAVVLACIV 101

[Close]
BLAST of Cla001591 vs. NCBI nr
Match: gi|659111814|ref|XP_008455920.1| (PREDICTED: uncharacterized protein LOC103495990 isoform X1 [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45
Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEVMTVGDAASSSIKT PAP LASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML
Sbjct: 1   MDEVMTVGDAASSSIKTSPAPFLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           DSGGMPSSHSATV+ALAVAIA QEGSGGPAFAIALVFACVV
Sbjct: 61  DSGGMPSSHSATVSALAVAIAFQEGSGGPAFAIALVFACVV 101

[Close]
BLAST of Cla001591 vs. NCBI nr
Match: gi|659111816|ref|XP_008455921.1| (PREDICTED: uncharacterized protein LOC103495990 isoform X2 [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45
Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEVMTVGDAASSSIKT PAP LASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML
Sbjct: 1   MDEVMTVGDAASSSIKTSPAPFLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           DSGGMPSSHSATV+ALAVAIA QEGSGGPAFAIALVFACVV
Sbjct: 61  DSGGMPSSHSATVSALAVAIAFQEGSGGPAFAIALVFACVV 101

[Close]
BLAST of Cla001591 vs. NCBI nr
Match: gi|449468382|ref|XP_004151900.1| (PREDICTED: uncharacterized protein LOC101219445 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 5.0e-45
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEVMTVGDAASSSIKT P P LASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML
Sbjct: 1   MDEVMTVGDAASSSIKTSPGPFLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           DSGGMPSSHSATV+ALAVAIA QEGSGGPAFAIALVFACVV
Sbjct: 61  DSGGMPSSHSATVSALAVAIAFQEGSGGPAFAIALVFACVV 101

[Close]
BLAST of Cla001591 vs. NCBI nr
Match: gi|700208102|gb|KGN63221.1| (hypothetical protein Csa_2G416120 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-37
Identity = 88/101 (87.13%), Postives = 89/101 (88.12%), Query Frame = 1 

Query: 1   MDEVMTVGDAASSSIKTLPAPLLASNLPLLSAFLAGAIAQFLKLFTTWYKERKWESKRML 60
           MDEVMTVGDAASSSIKT P P LASNLPLLSAFLAGAIAQ        YKERKWESKRML
Sbjct: 1   MDEVMTVGDAASSSIKTSPGPFLASNLPLLSAFLAGAIAQ--------YKERKWESKRML 60

Query: 61  DSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVV 102
           DSGGMPSSHSATV+ALAVAIA QEGSGGPAFAIALVFACVV
Sbjct: 61  DSGGMPSSHSATVSALAVAIAFQEGSGGPAFAIALVFACVV 93

[Close]
BLAST of Cla001591 vs. NCBI nr
Match: gi|567910585|ref|XP_006447606.1| (hypothetical protein CICLE_v10016908mg [Citrus clementina])

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-32
Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 1 

Query: 1   MDEVMTVGDAAS----SSIKTLPAPLLAS------NLPLLSAFLAGAIAQFLKLFTTWYK 60
           MDEV+TVGDAAS     +   L +P  +S      NLPL+SAFLA A+AQFLK+FTTWYK
Sbjct: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60

Query: 61  ERKWESKRMLDSGGMPSSHSATVTALAVAIALQEGSGGPAFAIALVFACVVCA 104
           E++W+SK+MLDSGGMPSSHSATV+ALAVAI LQEGSG P+FAIA+V AC+VC+
Sbjct: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVCS 113

The following BLAST results are available for this feature:
BLAST of Cla001591 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YUID_BACSU3.4e-0941.03Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD ... [more]
BLAST of Cla001591 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT60_CUCSA1.2e-3787.13Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416120 PE=4 SV=1[more]
V4UEY4_9ROSI1.5e-3267.26Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016908mg PE=4 SV=1[more]
B9IAH9_POPTR2.0e-3275.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s15420g PE=4 SV=1[more]
M5WI19_PRUPE5.7e-3270.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012498mg PE=4 SV=1[more]
A0A151RM78_CAJCA9.8e-3268.32Uncharacterized protein OS=Cajanus cajan GN=KK1_034943 PE=4 SV=1[more]
BLAST of Cla001591 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111814|ref|XP_008455920.1|1.7e-4596.04PREDICTED: uncharacterized protein LOC103495990 isoform X1 [Cucumis melo][more]
gi|659111816|ref|XP_008455921.1|1.7e-4596.04PREDICTED: uncharacterized protein LOC103495990 isoform X2 [Cucumis melo][more]
gi|449468382|ref|XP_004151900.1|5.0e-4595.05PREDICTED: uncharacterized protein LOC101219445 [Cucumis sativus][more]
gi|700208102|gb|KGN63221.1|1.7e-3787.13hypothetical protein Csa_2G416120 [Cucumis sativus][more]
gi|567910585|ref|XP_006447606.1|2.2e-3267.26hypothetical protein CICLE_v10016908mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000326P_Acid_Pase_2/haloperoxidase
IPR003832DUF212
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001591Cla001591.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000326Phosphatidic acid phosphatase type 2/haloperoxidaseunknownSSF48317Acid phosphatase/Vanadium-dependent haloperoxidasecoord: 18..102
score: 1.5
IPR003832Acid phosphatase/vanadium-dependent haloperoxidase-relatedPFAMPF02681DUF212coord: 25..102
score: 1.8
NoneNo IPR availablePANTHERPTHR31446FAMILY NOT NAMEDcoord: 1..101
score: 2.2
NoneNo IPR availablePANTHERPTHR31446:SF6SUBFAMILY NOT NAMEDcoord: 1..101
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001591Cp4.1LG16g04270Cucurbita pepo (Zucchini)cpewmB308
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001591Watermelon (Charleston Gray)wcgwmB213
Cla001591Watermelon (97103) v2wmwmbB321
Cla001591Watermelon (97103) v2wmwmbB330
Cla001591Watermelon (97103) v1wmwmB005