Cla001546 (gene) Watermelon (97103) v1

Overview
NameCla001546
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCytoplasmic FMR1 interacting protein 2 (AHRD V1 *--- A5A5E1_DANRE); contains Interpro domain(s) IPR008081 Cytoplasmic FMR1-interacting
LocationChr3 : 20604667 .. 20611543 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAAAGTCAAGCTGACCTATATTTGGAAACGTATCAAGTTTTGGATTTGGAAATGAGTCGTCTACGTGAGATTCAGAGATGGCAAGCATCAGCTGCATCGAAGGTATTGCTTTTAGCGAATTATTCCATTATTGTTAATTTAAATTACCATTGATGTACGCTGTCTTTTATGCAGCTTGCTGCTGATATGCAACGTTTCTCGAGGCCTGAGAGGCGCATCAATGGCCCAACAGTTACTCATCTCTGGTGTGTTATGATAAGTTTGAACTTAGGCTCCTCTAACATATAATTACACTATCACTTATCCCCTAATGTTGGGACGTTTTAATTTTATGTCAATTTTTCAATATTTCTAAATTCTAATTAAGCTTTTCCATCTTAGGTCAATGCTGAAATTGCTTGATGTCTTAGTTCAACTTGATCATCTTAAAAATGCCAAAGCAAGCATACCCAACGATTTCTCTTGGTATAAAAGGTAGGAGAACATTTTCTTTTGTCTTTATGATTTAGTGAATGACCATTGGGATGTAAAAGGGAAAGTTCGATTGTGATCAAGTTCATCAACAATTTAGTCTCCTTTTGCAAGCTGGTTACATATGGTCCATGATAAACAAAATAGAGAAAAAGGAGACCCCCATACTAGCCTAACATATTTATGCCTTGTTTAGTGTAAAGAATGGCATCAGTTTTTTTTTCCTCCCTTTTGGGACTAACTCTTCGACATCATAGGCCCGTTAAGAATAAAGTCATTTGAAATGATTTGGTTCCTATATGAAGCATTAGGGTTGATGCCCTTTTCCTCAATTTGTTTGGAGTTAATTTTTTTAATGTGTGTGGGTTCCAGTCACCAAAATTCAAAAAGATATTTCCTCTATTAACATCAATGATTTCAATTGTTGAAGGCAAAAACCCGCACAAGTTTCTCTTTACCCGAATTTTTGCTTCCGAGCAATTCAGTAGATTTAGATTTTCATTAGCGATCTCCTTTAAGGCCCCCAAAATATTCTCCAATTGCTTTAAAAGTTTTCTTGCACCAATAGTCTAGGGAGAGATTTTTTATTTTAAGCCAACCACCACAAACCTTTCATTAGTAATGGTCTGCTATGCTTGAATTTGTTCCATTTCTCCAAATTCGTCTATGAGGTCAACTATCAAACCTTCCTCTAATTTGAATATAGTGTTTTCAGCAAACAAAGGATTTATGATAACTTTAGTGTTGAATATCTCTTCCAACACATTCGCTATCTCCTTCCAATCATCAAACTCGAACAATCGTGAGATTATCCATAGGTTATTAAAATCTTCTTGTAGAACCTCTTCATTAAGCTGATCCCAGTAAGAGTTGATACTCTGTTTTACTCCTACCAAAACAGAGGACTGATTGACCAATGATTTCCCATTTTCTATGTTCTGTTTTTCCGGTGCTAAAACAGATGGATGATGGATTTCGACTTTTTTGGCCATTTCAGCATAGCTTGGACTTTTAAATTGAGCTGAAGGTAGTTTCATCCCTTTTGATATGACTGTGGTCGACTTGGCTAGGCAATAACTATGCCCCTGAGTGTAGATAACTTTCTTTGAAAAACTTTATATCATTTTAAGAAGATTTTTCCAACCTTTTTGAGAGGGGCCCGCTTGGATGTGAATGAAGAATCTTCTCCCTGTTATTGGCCAAACTACGCATCTGAGAATCCATTATGCATTAGCTTTAAATTTTGATATACTCGAAGTATCATAATCATCTCTATTCTTCTTTCGGAAAAAATCTATCAGAAGGACCCTGAAGTAGCTTTGAAATGGAATTTATAAACCACCTCAGCTGGCTAGAGGAAATCGGTATGAACTTCTTGGCTTCCACATCTTCGATATTGAAAACGCCGCCCTCGAACCAAATACAGTAAAAGGACCCTTGTATTTTGCAACTTTCCACTTCCAATGCAAAATTTATGTTGTAATGAATCGCAAGCAATAACTGATTAAATATGCCTGAATACTTTAATTAAGGAGTTGAAATCTGACCGTTTATCTGCCGCCATAGATGGGAGGAGGAGGTAGGAACAGAGGTAGAGGAGAAGAGAGAGGAGAATAGAGAGGGAAGGTGGGGAATTCCGAGGAGGAGGAAGGAGAGAGGAGGAGGAGAACTATCTTTGAGGGAAGCACCATTAAGCCATGGATTCATCCAAAATGAAATCTTGACTCCCATTGCCAACTTTGAAATGAGCAAGACTCTCCACCTTTTTCCAAGATTTGGTTATGCTAATGTAACAGCCGGTATTGCCAATACAGCTATTGTAACAGCTCGTATTGCCAATACAACTAATATAACAAAAATGTAGAAACATAACCATTGTAAATTTTTACAACTTACACAAAGTAGTAGAAGCATCTTATTACAAACAAGTTCTAAGTCAAACTATCAAATCTGAAAAGAAACATCCTTTGATGTCGTATCCAAGAACGCCAAACTCCTTTTTCTTCAGAACTATCATCTGAAAGCATTTTGGAAAAACAAAGATGAGTACAAAAATACTCAATAAGCAATTTCCATGTCAAGCTTTTTTTTTTTTTTCTTGGACATCCATAAGTATCCGGGCCAACTTACACACACCTCAACTAATCTCATGAGACAACTTGCCTGACCTTGAATATTTGGGTGTCAAGGAAACTCGTAGGATATTAAATCCTAAGTAGGTGACTATAACTTAATCATAGCCTTGTCAGCCTTGGATATTGAATCCATGGGTTGAAACCATAACCTCTTAGCCATTTATTGAGACTATGTCTCCTTTTTTACCCAGCTTTGAAATTCATCTTCTTTTAGAACTTTTGAAAATCAAAATACAAACATTTCAGAACTTTCAGTAAAAGCTTTGCTACAAACCGTACTTCCAAAATCAAAATCATTCAAGCAAATAAACTTTCAGAACTAAAATGTTTCTAGTTGAAACTTCCAAATAGTCTTACAACAAAACCAAAATGTTCGAATAAGCTTTCAGAACTTTAATAAAAGAACTTCCATAGTTTTTAAACCACAAATCTTTCAATCTTTTCAAATACAAAACTTCCAATCAGTCAACCCGTTCAATCAAACAGAACTTTCAAATATAGATTAGGAAAGGTATAATTGGAGTAGCCCAACAGAAATGGTCACCCATCAGTAACACTGGCAGAAATGGTTACCCGTCGGTGACACTAGCAAAATTGTTGATTCCCAGGCAAAGTGTTAAAAACTATGTAACAATCATCGATTTTGGATGGCTGTATCAATTCCCATTTAGAAAACCCTCCAACCAAACGACCCAAAAAGAATTAATGTTCTCTTATGGACTATGTTAAATGATAGCCTTAGTTCTTCAGATATTTTGCAGGTGAAAATTCCCAGAAAATGCATCATGCCTTCATTCTGTTGGGCAAAATTGTTTGAGATCTTTAATCTACATTGGATCTTCTCCAATATTTTCAGAAGCAATCTATCTTAACAAGTCCCTTTCTTGGATTAATGGGATGAACGCAATTCTATCTAAATCATGGTTAGAGAGGAATCAAAGAATCTTTCACGACAAGTCTCTTTCTTGGATTAATCATTTTGAGTTATCTCGGTTGAAAGTTTCTTCTTGGTGCTCCTTATCTAGGTCATTCATGGGATAATCTCAGCAAAATATTTGCGTCTACTGGAATGTTTTTATATATCTTCCTTAGATTTTTGTTGTTCCTTTATGGTTATTCTACTGTCTTTTTGTGTTCTCTCTTTCTCCTTTGTGGAGTCTGTATCTTAAATAAAGACACTAAAAATGATTATTCAAGGATTAAATCAAAATTAACATGAATTTACCCAATTTGCTCTAATCCAACTACATCGCCAATTAATTGCCAGAGTGTTATGTTGGCCAAATGTCTTTCTAGTATTACAAATTTGCCTAATTTTGGGCTTTAACTTTTCATGGAATTATTTTTATTATCTGTTTATGATCGTGAATGTAAATAATACGGAAAGGTCAGATATTGATAGAAGTTTCTGGCTAGTAATAAAAAGTAATTTTTTCTTATTCATTTTCTTTTATTTCTCCAGGACCTTTACACAAGTCAGTATTCAGTGGCAAGACTCTGATTCAATGAGAGAAGAATTAGATGACTTACAGGTTCTTGATACCACCCCTAAAATGTTATGTTGTATGTGTGAACAAGGGCTGTAGGGTCAGAATATTTTCAATTTCGTGAACCATATTTTCTGTAGTCTATTTGGTTCCCTAGGTCTTCGAGTGATATCAAATCCTAACGGATTTCAAATGAATTTTGTTTATTGTTATCCCATAGACGATAGAATAGAATGATCTGAGATTAAAGTAATTTTGAATCATGTTTTTCTGTCAACAAATTTTAAAACCAAAATGATAGTATTTTGCAAAATTTTATGTAGTTTTGAGATAGATTATTTATTTTTTTTTGAAAAAGGAAACAAGCCTCTTCAATCCTATTCATCAAACTCAAATAGTCATGATAATACCCACAGGTTTTCGAAATCCTCCTTGAACACTTCTTTATCCTTTTGGATCCATCTTTGTAGCTTCCTCTGTTTATCGGGTGCTAAAACAGAAGAATTCAACTTGACAAAAAAAGCCTCCGACGATGTGCTCTGTTTTAGTGGTGCCTGAACAGGGAATTTTTGAGGACTTGTTCCCTTTGATAATATCTCTGCATAACTCGGTTGTTGTGGGGGGGGGGGGGGGGGGGGGGTGACTATTGGTAACTTCTCACTACTTGCAAGCTTTTCTCTAGAGCTCCCGTTTCTTTGGATGAAGTTGTTAAGCATATTCAAAAAATCTGCCGAACCTTGTTGTGCTGGCCTCTGGTACATGTATGAATAGGCATCCTCCAGTAGTTGGCCAAACCACACATCTTATGTTCCAACCCAATTTATTTTTGAACTTTGCTAATCTCATTGTTCCGGAAGCGTCTTGCATTTCCCTTAAGAAAAATCGGACACTTGACCCATTGAGAAGGTCTGTGAGCTGATTCACTAACCATTGCATATGCGTCTCCGATAAGAGTAGTACTTTTTTTGTGTCCATATCTTCAACTATGAACTTCTCAGATTCGAACCAAGTATAGAAGAAATTGACATTGATCTTACAGCTGACAACTTCCATGAGTGAAGCGTGATTGAGAAAACGGTGTGCCGGTAGGGGGGTTTGACTTAGGGAGAAACTTGACCGGCGGGGACTACCGGAGAAGAGTTGAGCAAGGAGAGAAGGGGGGAGAGAGGAGAGAGAAAAGAGAACTTACCAACAATGATCTTAGCTTTCTAGGAAGATTACTTATGTAAACTTATTGTATATCAAATTTCAATCTCTTATTAAAAAATCAAGATTAATAGCTTAATAAGCAAACTTTTTTACTTTATTTTCCTTTCTTGTGAACATCCAAACTAAAAAAATTTAATTATGTTCCTTTCAAATCTTTCTTGTTCCTAACAAGTCAAAAAAATTTAGGTTAAAAATCATTTTTTGGTCCTTGGAAGTAACGATTTAGTCCCTAAACTTTAATTTGTAATGATTTAGTCTCTTTACTTCTAAAGTTGTAACAATTTAGTCCCTACACTTTAATAAGTATCAATTTAGTCCTTGTACTTTACAATTTATAATGATTTACTCCCAAGCGTGAAAAGTAATGATCATATGAAATTTCTTACACATGTAAATTAACAAATTATGGTCAAGTTTGTTTATAAATTATAAAGATGTAGTCACATAATCAAAATTGACAATTAAGTTTGATGAATCTTTTCACAATAAGTATTAATTTGTTACAAAGTTGAAAGTATAAGGACTAAATTGTTACATGTTAAAATACAAGGACTAAATTATTACAAATTTGAAAGTACAAGGACTAATTTGTTACACATCAAAGTTCAAGGACTAAATTGTTACTTCTAAAAGTTTAGAGACCAAAAGTGATATTTAACCAAAAAAGTTCGAAACCATTTTTTGGATTTCAAATCACATGATTTAAAAAAATCATTTCTTGAACTTTCTTGATTCCAAATGGAGGGTCAATGAATTATGAAATATTGCTTTGTTAGCTTGGCACTGTAATATTAATCATCCTTTTAACTTCTAACTTTCTTTGTTTTCTCTCTCCCTCTCTATTTTGCAACAGATTTTCTTAAGCACACGATGGGCCATTTTATTGAATCTGCATGTTGAGATGTTTCGTGTAAATAAGTATCCTCACTCTTAGACGTATGCCAAATGAAGAGGATTGAATTCGTCCAGGGACTCTAAATTTTTTATGTCTTGATTTGTCTTGAAGTTCTACAAAAGTTTCTAAAAAAAAAAAATCCCTTTCATCTTTTTAGACTTCCTTGACATGAAATAGTGTAGAAGACATTCTTCAAATCCTCATTGTCTTTGCTGTGGAGTCACTGGAGTTGGATTTTGCACTTCTATATCCAGAGAGGCATGTGCTTTTACGTATTTTGCCTGTTCTTGTTGTATTAGCAACATCGTCAGAGAAGGACAGCGAATCACTTTATAAGAGGGTGAAGATTAACAGACTCATTAACATCTTTAAGGTATTGCAGCCTAAAGAATGTATAATCAAATAATTGATTTCTTATTACTTATAAGACAGATTATATTTTGGCTATTCCATATTTTTTTATATCTTTCCAGAATGATCCAGTGATTCCAGCATTTCCAGATCTTCATCTTTCTCCTGCAGCAATCTTGAAAGAGTTGTCGATATACTTCCAAAAATTTTCTGCCCAAGCTCGTTTTCTTACTCTTCCAGCACCACATGAGCTTCCACCACGTGAAGCACAAGAATATCCTGTTCTGTTTTCCTTTGGTGTCTACTCTCTCGACTGGGCATGA

mRNA sequence

ATGAAGCAAAGTCAAGCTGACCTATATTTGGAAACGTATCAAGTTTTGGATTTGGAAATGAGTCGTCTACGTGAGATTCAGAGATGGCAAGCATCAGCTGCATCGAAGCTTGCTGCTGATATGCAACGTTTCTCGAGGCCTGAGAGGCGCATCAATGGCCCAACAGTTACTCATCTCTGGTCAATGCTGAAATTGCTTGATGTCTTAGTTCAACTTGATCATCTTAAAAATGCCAAAGCAAGCATACCCAACGATTTCTCTTGGTATAAAAGTGTAGAAGACATTCTTCAAATCCTCATTGTCTTTGCTGTGGAGTCACTGGAGTTGGATTTTGCACTTCTATATCCAGAGAGGCATGTGCTTTTACGTATTTTGCCTGTTCTTGTTGTATTAGCAACATCGTCAGAGAAGGACAGCGAATCACTTTATAAGAGGGTGAAGATTAACAGACTCATTAACATCTTTAAGAATGATCCAGTGATTCCAGCATTTCCAGATCTTCATCTTTCTCCTGCAGCAATCTTGAAAGAGTTGTCGATATACTTCCAAAAATTTTCTGCCCAAGCTCGTTTTCTTACTCTTCCAGCACCACATGAGCTTCCACCACGTGAAGCACAAGAATATCCTGTTCTGTTTTCCTTTGGTGTCTACTCTCTCGACTGGGCATGA

Coding sequence (CDS)

ATGAAGCAAAGTCAAGCTGACCTATATTTGGAAACGTATCAAGTTTTGGATTTGGAAATGAGTCGTCTACGTGAGATTCAGAGATGGCAAGCATCAGCTGCATCGAAGCTTGCTGCTGATATGCAACGTTTCTCGAGGCCTGAGAGGCGCATCAATGGCCCAACAGTTACTCATCTCTGGTCAATGCTGAAATTGCTTGATGTCTTAGTTCAACTTGATCATCTTAAAAATGCCAAAGCAAGCATACCCAACGATTTCTCTTGGTATAAAAGTGTAGAAGACATTCTTCAAATCCTCATTGTCTTTGCTGTGGAGTCACTGGAGTTGGATTTTGCACTTCTATATCCAGAGAGGCATGTGCTTTTACGTATTTTGCCTGTTCTTGTTGTATTAGCAACATCGTCAGAGAAGGACAGCGAATCACTTTATAAGAGGGTGAAGATTAACAGACTCATTAACATCTTTAAGAATGATCCAGTGATTCCAGCATTTCCAGATCTTCATCTTTCTCCTGCAGCAATCTTGAAAGAGTTGTCGATATACTTCCAAAAATTTTCTGCCCAAGCTCGTTTTCTTACTCTTCCAGCACCACATGAGCTTCCACCACGTGAAGCACAAGAATATCCTGTTCTGTTTTCCTTTGGTGTCTACTCTCTCGACTGGGCATGA

Protein sequence

MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKSVEDILQILIVFAVESLELDFALLYPERHVLLRILPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLPAPHELPPREAQEYPVLFSFGVYSLDWA
Homology
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BLAST of Cla001546 vs. Swiss-Prot
Match: PIR_ARATH (Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 2.0e-91
Identity = 181/253 (71.54%), Postives = 194/253 (76.68%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MK SQADLYLETYQVLDLEMSRLREIQRWQ+SA++KLAADMQRFSRPERRINGPTVTHLW
Sbjct: 95  MKHSQADLYLETYQVLDLEMSRLREIQRWQSSASAKLAADMQRFSRPERRINGPTVTHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYKSV-----------------EDILQILI--- 120
           SMLKLLDVLVQLDHLKNAKASIPNDFSWYK                    D LQI +   
Sbjct: 155 SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PER++LLR+LPVLVVLAT S
Sbjct: 215 WAILLNLHVEMFRVNNVEDILQVLIVFIVESLELDFALLFPERYILLRVLPVLVVLATPS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 209
           EKD+E+LYKRVK+NRLINIFKNDPVIPAFPDLHLSPAAILKELS+YFQKFS+Q R LTLP
Sbjct: 275 EKDTEALYKRVKLNRLINIFKNDPVIPAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLP 334

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BLAST of Cla001546 vs. Swiss-Prot
Match: PIRA_DICDI (Protein pirA OS=Dictyostelium discoideum GN=pirA PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.8e-06
Identity = 27/93 (29.03%), Postives = 54/93 (58.06%), Query Frame = 1 

Query: 93  EDILQILIVFAVESLELDFALLYPERHVLLRILP-VLVVLATSSEKDSESLYKRVKINRL 152
           +DIL +++    + LE +  +L  E+H LLR++P VL ++  +  K + +  K + I+R 
Sbjct: 241 DDILPMIVNQCADYLEQEKYILPSEKHCLLRVMPFVLFLIDENDSKHNINKNKNLNISRY 300

Query: 153 INIFKNDPVIPAFPDLHLSPAAILKELSIYFQK 185
             IFK +PV+P + D+ ++  +++K    + +K
Sbjct: 301 AKIFKKNPVVPLYGDMQITLESLVKRSPHFDEK 333


HSP 2 Score: 41.2 bits (95), Expect = 1.7e-02
Identity = 22/97 (22.68%), Postives = 49/97 (50.52%), Query Frame = 1 

Query: 4   SQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRP---ERRINGPTVTHLW 63
           ++  +Y   ++VL+ E+ +L++   +Q          +++ +     ++     + + + 
Sbjct: 104 NKTQIYEGNFEVLEPEIKKLKDFMYFQKDTIKLFCDHIKKLASTYDKKKETISASESFIN 163

Query: 64  SMLKLLDVLVQLDHLKNAKASIPNDFSWYKSVEDILQ 98
            ++++LD+L  LD LKN KA + NDFS++K     L+
Sbjct: 164 YLVRILDLLAILDALKNMKACLNNDFSFFKRATGFLR 200

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BLAST of Cla001546 vs. TrEMBL
Match: F6HI28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00740 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.6e-95
Identity = 193/258 (74.81%), Postives = 204/258 (79.07%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPT+THLW
Sbjct: 95  MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV            D LQI +   
Sbjct: 155 SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVHWQDTDSMREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 215 WAILLNLHVEMFRVNNVEDILQVLIVFAVESLELDFALLFPERHILLRVLPVLVVLATSS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 214
           EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKEL++YFQKFS Q R LTLP
Sbjct: 275 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELAMYFQKFSTQTRLLTLP 334

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BLAST of Cla001546 vs. TrEMBL
Match: B9I5S3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04800g PE=4 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.3e-94
Identity = 191/259 (73.75%), Postives = 206/259 (79.54%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MKQSQADLYLETYQVLDLEMSRLREIQ+WQASA+SKLAADMQRFSRPERRINGPT+THLW
Sbjct: 95  MKQSQADLYLETYQVLDLEMSRLREIQQWQASASSKLAADMQRFSRPERRINGPTITHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           +MLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV+           D LQI +   
Sbjct: 155 TMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDIDSIREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 215 WAILLNLHVEMFRVNTVEDILQVLIVFAIESLELDFALLFPERHILLRVLPVLVVLATSS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 215
           EKDSESLYKRVKINRLINIFKNDP+IPAFPDLHLSPAAILKELSIYFQ+F+AQ R LTLP
Sbjct: 275 EKDSESLYKRVKINRLINIFKNDPIIPAFPDLHLSPAAILKELSIYFQRFAAQTRLLTLP 334

[Close]
BLAST of Cla001546 vs. TrEMBL
Match: V4VTN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023801mg PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.9e-94
Identity = 192/255 (75.29%), Postives = 203/255 (79.61%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MK SQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPT+THLW
Sbjct: 96  MKHSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW 155

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV+           D LQI +   
Sbjct: 156 SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTR 215

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 216 WAILLNLHVEMFRVNNVEDILQVLIVFAVESLELDFALLFPERHILLRVLPVLVVLATSS 275

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 211
           EKDSESLYKRVKINRLINIFK+DPVIPAFPDLHLSPAAILKELS+YFQKFSAQ R LTLP
Sbjct: 276 EKDSESLYKRVKINRLINIFKSDPVIPAFPDLHLSPAAILKELSMYFQKFSAQTRLLTLP 335

[Close]
BLAST of Cla001546 vs. TrEMBL
Match: A0A166D3Z6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005525 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.3e-93
Identity = 191/258 (74.03%), Postives = 203/258 (78.68%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MK SQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSR ERRINGPTVTHLW
Sbjct: 1   MKHSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRSERRINGPTVTHLW 60

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKN+KASIPNDFSWYK      S++           D LQI +   
Sbjct: 61  SMLKLLDVLVQLDHLKNSKASIPNDFSWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTR 120

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+P+RHVLLR+LPVLVVLATSS
Sbjct: 121 WAFLLNLHAEMFRVNNVEDILQVLIVFAVESLELDFALLFPDRHVLLRVLPVLVVLATSS 180

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 214
           EKDSESLYKRVKINRLINIFKNDPV+PAFPDLHLSPAAILKELS+YFQKFSAQ R LTLP
Sbjct: 181 EKDSESLYKRVKINRLINIFKNDPVVPAFPDLHLSPAAILKELSMYFQKFSAQTRLLTLP 240

[Close]
BLAST of Cla001546 vs. TrEMBL
Match: A0A067JUV3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23588 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.3e-93
Identity = 190/253 (75.10%), Postives = 201/253 (79.45%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MK SQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPT+THLW
Sbjct: 95  MKHSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV+           D LQI +   
Sbjct: 155 SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDIDSMREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 215 WAILLNLHAEMFRVNNVEDILQVLIVFAVESLELDFALLFPERHILLRVLPVLVVLATSS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 209
           EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELS+YFQKFS+Q R LTLP
Sbjct: 275 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSMYFQKFSSQTRLLTLP 334

[Close]
BLAST of Cla001546 vs. NCBI nr
Match: gi|296085165|emb|CBI28660.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 355.5 bits (911), Expect = 6.6e-95
Identity = 193/258 (74.81%), Postives = 204/258 (79.07%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPT+THLW
Sbjct: 95  MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV            D LQI +   
Sbjct: 155 SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVHWQDTDSMREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 215 WAILLNLHVEMFRVNNVEDILQVLIVFAVESLELDFALLFPERHILLRVLPVLVVLATSS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 214
           EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKEL++YFQKFS Q R LTLP
Sbjct: 275 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELAMYFQKFSTQTRLLTLP 334

[Close]
BLAST of Cla001546 vs. NCBI nr
Match: gi|566199478|ref|XP_002319128.2| (hypothetical protein POPTR_0013s04800g [Populus trichocarpa])

HSP 1 Score: 354.0 bits (907), Expect = 1.9e-94
Identity = 191/259 (73.75%), Postives = 206/259 (79.54%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MKQSQADLYLETYQVLDLEMSRLREIQ+WQASA+SKLAADMQRFSRPERRINGPT+THLW
Sbjct: 95  MKQSQADLYLETYQVLDLEMSRLREIQQWQASASSKLAADMQRFSRPERRINGPTITHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           +MLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV+           D LQI +   
Sbjct: 155 TMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDIDSIREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 215 WAILLNLHVEMFRVNTVEDILQVLIVFAIESLELDFALLFPERHILLRVLPVLVVLATSS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 215
           EKDSESLYKRVKINRLINIFKNDP+IPAFPDLHLSPAAILKELSIYFQ+F+AQ R LTLP
Sbjct: 275 EKDSESLYKRVKINRLINIFKNDPIIPAFPDLHLSPAAILKELSIYFQRFAAQTRLLTLP 334

[Close]
BLAST of Cla001546 vs. NCBI nr
Match: gi|567901612|ref|XP_006443294.1| (hypothetical protein CICLE_v10023801mg [Citrus clementina])

HSP 1 Score: 352.4 bits (903), Expect = 5.6e-94
Identity = 192/255 (75.29%), Postives = 203/255 (79.61%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MK SQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPT+THLW
Sbjct: 96  MKHSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW 155

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKNAKASIPNDFSWYK      SV+           D LQI +   
Sbjct: 156 SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTR 215

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 216 WAILLNLHVEMFRVNNVEDILQVLIVFAVESLELDFALLFPERHILLRVLPVLVVLATSS 275

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 211
           EKDSESLYKRVKINRLINIFK+DPVIPAFPDLHLSPAAILKELS+YFQKFSAQ R LTLP
Sbjct: 276 EKDSESLYKRVKINRLINIFKSDPVIPAFPDLHLSPAAILKELSMYFQKFSAQTRLLTLP 335

[Close]
BLAST of Cla001546 vs. NCBI nr
Match: gi|1009129968|ref|XP_015882048.1| (PREDICTED: protein PIR [Ziziphus jujuba])

HSP 1 Score: 349.7 bits (896), Expect = 3.6e-93
Identity = 189/253 (74.70%), Postives = 202/253 (79.84%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPT+THLW
Sbjct: 95  MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW 154

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKNAKA+IPNDFSWYK      SV+           D LQI +   
Sbjct: 155 SMLKLLDVLVQLDHLKNAKATIPNDFSWYKRTFTQVSVQWHDTDAMREELDDLQIFLSTR 214

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+PERH+LLR+LPVLVVLATSS
Sbjct: 215 WAILLNLHAEMFRVNNVEDILQVLIVFAVESLELDFALLFPERHILLRVLPVLVVLATSS 274

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 209
           EKDSESLYKRVKINRLIN+FKNDPVIPAFPDLHLSPAAI+KELSIYFQKFS+Q R LTLP
Sbjct: 275 EKDSESLYKRVKINRLINVFKNDPVIPAFPDLHLSPAAIMKELSIYFQKFSSQTRLLTLP 334

[Close]
BLAST of Cla001546 vs. NCBI nr
Match: gi|1021046908|gb|KZN04688.1| (hypothetical protein DCAR_005525 [Daucus carota subsp. sativus])

HSP 1 Score: 349.4 bits (895), Expect = 4.7e-93
Identity = 191/258 (74.03%), Postives = 203/258 (78.68%), Query Frame = 1 

Query: 1   MKQSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTVTHLW 60
           MK SQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSR ERRINGPTVTHLW
Sbjct: 1   MKHSQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRSERRINGPTVTHLW 60

Query: 61  SMLKLLDVLVQLDHLKNAKASIPNDFSWYK------SVE-----------DILQILI--- 120
           SMLKLLDVLVQLDHLKN+KASIPNDFSWYK      S++           D LQI +   
Sbjct: 61  SMLKLLDVLVQLDHLKNSKASIPNDFSWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTR 120

Query: 121 ----------VFAVES---------------LELDFALLYPERHVLLRILPVLVVLATSS 180
                     +F V +               LELDFALL+P+RHVLLR+LPVLVVLATSS
Sbjct: 121 WAFLLNLHAEMFRVNNVEDILQVLIVFAVESLELDFALLFPDRHVLLRVLPVLVVLATSS 180

Query: 181 EKDSESLYKRVKINRLINIFKNDPVIPAFPDLHLSPAAILKELSIYFQKFSAQARFLTLP 214
           EKDSESLYKRVKINRLINIFKNDPV+PAFPDLHLSPAAILKELS+YFQKFSAQ R LTLP
Sbjct: 181 EKDSESLYKRVKINRLINIFKNDPVVPAFPDLHLSPAAILKELSMYFQKFSAQTRLLTLP 240

The following BLAST results are available for this feature:
BLAST of Cla001546 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PIR_ARATH2.0e-9171.54Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2[more]
PIRA_DICDI9.8e-0629.03Protein pirA OS=Dictyostelium discoideum GN=pirA PE=1 SV=1[more]
BLAST of Cla001546 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HI28_VITVI4.6e-9574.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00740 PE=4 SV=... [more]
B9I5S3_POPTR1.3e-9473.75Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04800g PE=4 SV=2[more]
V4VTN6_9ROSI3.9e-9475.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023801mg PE=4 SV=1[more]
A0A166D3Z6_DAUCA3.3e-9374.03Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005525 PE=4 SV=1[more]
A0A067JUV3_JATCU4.3e-9375.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23588 PE=4 SV=1[more]
BLAST of Cla001546 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|296085165|emb|CBI28660.3|6.6e-9574.81unnamed protein product [Vitis vinifera][more]
gi|566199478|ref|XP_002319128.2|1.9e-9473.75hypothetical protein POPTR_0013s04800g [Populus trichocarpa][more]
gi|567901612|ref|XP_006443294.1|5.6e-9475.29hypothetical protein CICLE_v10023801mg [Citrus clementina][more]
gi|1009129968|ref|XP_015882048.1|3.6e-9374.70PREDICTED: protein PIR [Ziziphus jujuba][more]
gi|1021046908|gb|KZN04688.1|4.7e-9374.03hypothetical protein DCAR_005525 [Daucus carota subsp. sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001546Cla001546.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPANTHERPTHR12195P53 INDUCIBLE PROTEIN-RELATEDcoord: 1..197
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001546ClCG03G011400Watermelon (Charleston Gray)wcgwmB233
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001546Watermelon (97103) v2wmwmbB133
Cla001546Melon (DHL92) v3.5.1mewmB268
Cla001546Watermelon (Charleston Gray)wcgwmB228
Cla001546Cucumber (Chinese Long) v2cuwmB030
Cla001546Bottle gourd (USVL1VR-Ls)lsiwmB398
Cla001546Cucumber (Gy14) v2cgybwmB031
Cla001546Silver-seed gourdcarwmB0912
Cla001546Cucumber (Chinese Long) v3cucwmB037