Cla001542 (gene) Watermelon (97103) v1

Overview
NameCla001542
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCytoplasmic FMR1 interacting protein 2 (Fragment) (AHRD V1 *--- Q5STT5_MOUSE); contains Interpro domain(s) IPR008081 Cytoplasmic FMR1-interacting
LocationChr3 : 20536075 .. 20540920 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGACAGCACCTTGGTTAGGGATAATTCCAGGTGCTGATGGGCAAATATTGCATTCTCAAGATGGAGATAGCCCTATTGTAAACCTATTCAAGTCGGCAACAAGTGCAATTGTTTCAAATCCTGGAAACCCTAATGGAATGTTATACTATACCATGTCAAAACAGGCTGAAGCAGCAGGTTTTCTACTATATCACTAACAATTTCTCTTTACTGTTCATTTCACAATTTCTACTATTTCACCCAGGTTGCATCATTCCAGGTCTGCTAACCGATAATATTTTACCATTTTAACTTTAAGTCATGTTATCATACAAGTCTAGATTTCTGTCGTGATGTGTTGGTGCTTTTCCATCCTCCCTTTCGTGATAATATCCTATGGCATTGTGCTTTATTATTGTTATTGTATGATGGATTTTTATTTGATTATAGAGAATACAAGAGGTTTGAGAGACAAGATAGTGTTCTCTTATTAGATTTAATACATCTCTTTGGGCTTCTAGTACTAAGGATTTTTAAATAATCCTTTAGGCCTGGTACTTTTGGATTGTACGCCTTTTTTACTATATTAGTCTTGGAGCTAGGCCCTTTTTTCTGTTTTTTGTGTATGCCTTCTATTATTTTTTATTTTAGGAAAAATTATACTCTTGATCCCTGAGATTAGGATTTGGTAGGATTTTGGTCCCTGCCGTTAGCTTTTTATTATGGTAGCTAACGGAAGTTGATATGAGAATTTTCTTTATTTCAAAAGTATTTTTAAATTTTTTTCAAAATAAAAAATTGTTTATATTTTTTTCTTTTTCCTTTTTCCCTCCTTCCATCCATGGCTGTCATCACCCCATCTTTTTCTTTCTTTCTCTTTTCGTTTTCTATTCTTCTTTCCTCTTCTTCCTTTCGTCTTCTTTCTTTTTCTCCTCTTCTTCTCTTTCCTTTTCCTTCTCCTTTCTCTCCCTCACCATGCCAACTTTTTGGACTTATTTGGGTATATTTTTCATAATTAGTTTCTTCTAAATTGTTTGTGGTAAATTTGAAAACTTGATATCAAAGAGCAATTAGTACATTATGTTTTTTCTTTTTTTCATGAGAAGTTGAAAGTAAAAAGACAATGTCATATAAAAGTTATTAAACAGAAGTTTATTATAGGAAAAGAAAAAAAAAAAATCAATATATATATAAAAATAAGGGATGTTTTCAAAAATAGAAAAACGGTTGAAAATAATTACAAATATAAAAAAATTTTACTTTCTATCGTAGTCTATCACAGATAGAATTTAAAATTTTGCTATATTTGTAAATAATTTGATATTTTTTCTATTTGTAATAATTTTCCTAACAATAATATTAATTAATTAATTAATTTAAATATTTTTTATTTTAAAATAATAAATAAATAAAGGGGTGGAGCCTAAAGAACAAAAACAAAACATAATCATGGAAAGGAGATCCAATTTTTATGATTAAAGATCTGAGATGATTGAAAAATTAACTTCCTAGGGAACTCACTCTCAAAGAAGTTGAAGCACACTCCAAACCTCATCCCAAATTTTCACCCCTGCGCTGGGAACTAAAGAACTGACACCTGCTTACACAGAATAAAATGACATCGCTATATAGTATGGTTCGTGTCTTCTAACACTTGTTTAAGCAAAATACATCACTGTGAGTGTAATAAATTTCTGAAAGAAATCTTCTAAACCTTGGAAGACAAGATGAATTAGCTTTTGAAGGACTTCTAAGAGTGCCTTTTGACACAGTTAAAGTGTCCTGGTTGGCAAAGTCTCAAATCTTAGAGGGAATGTGCGACAACCACTTGACTATGGGAGGGGTAACATAGAGAGGTAACATCACATTCATCATTGTGGTCTTGAAAGGAGAAAGGTTCAAGATTATCTCTGAAGGGAAGGTTTAAGTAGGCCGTTGGCAGAAACCTCATAGCCTATCAACTGAACCCATCTTGCTAGCTGACGGGGCGCACAATTGATAGTGACAACTTAGTACTAAGACAAAAAATGGACTCAAATTGCTGTAGGATCTACTAAGATTAACAAAAGACTCCTCCCAAAGCAAAAGAAAATGATGTTCCACGTCACGCAACCAATGTTTTTGAGTGCCTCTTCTCTTAGCGTGCAGATAGCTTGTCACAATGACCCTTGCACCTAAAAACTTAAAATTATGTCAAGAAAATAGTAAGCACTCAAATGCAAGAATTGTTTGAGCTATCTTTGTTGTTTCTGATGGAAAGTGTATATATTTCAAGGAAAAAAAACAAACAACATGAACAGAGCTGCAAAGCAAAAGGTTCCTTTTTTTTTTTCTTTTTTTTTCTTTTTTTTCTTTTTTGCTGTTTTCACTTTTAGCAACAGAAAATATGAGCTGAACCCATTTTCGAAATAAACCATTGGCACTTCACACATGAACTAGGCCATAATAGTGTTGACTGCGGAAGGCACCTTCTCTAAAGAATGCAAAACCTTTCAACGAGCCTTGTCAAGCTTTTTTTGTGCTAGAAAATTATCAATGCATCTGCTCCGGCAATTTTAGCAGTTATATTTAATAGCCAACTTTGTACATCTATTTTTCCTTTTTTCCTCTCCTTCCTGTTTTAGTAATATTCAATCTTTCTGTTTTTGCAGATCTTCTGTACAAATCTAACTTGAACACTGGGAGTGTTCTAGAATATGCACTTGCCTTTACAAGTGCTGCTCTGGATAAATACTGTAGCAAATGGAGTGCTGCTCCCAAGACTGGATTCATTGACATCACTACTTCCAAAGATTTCTATAGGATATATAGTGGACTCCAAATAGTGAGCCTCACTACCCTTTTATCCGTTGTTTGGTCTATCTTTGCTACTTTTTGTTATCTCTCTGGTTAATGAAAGTATTGTTTCTTAAAAATAAAAAATAATAAATAAATAACTACTTTATGATCATTGTAGATCTTCTTTCAATCATTTTCACCTAAGGGTATGTTCTATATTGTTAGTTAATTTTCATCCATGGTTGGTTTGTGGTAAACAATTATTGGCGCAGCAGCAAGACAGAAGCTTAGACTCTAATTGGATTAGATCATGTTTTCTAAATTCTATTATTGCTTTAATTTCACTGTCGTTATTTTATGTAATACTCCTCTTTAAATAATGGAATCTATGTTACACAAGTGGTTAATGTGCATGGTTTAGTTTATTTTCTATACAATATAAAGTTATGAATGACAATCCTCCATTGACGCATATCCTACAGTTACTAAAGGAATTTAATTTCATTGCCTTCTACTTCACCAGAATGATAATAAAATTGAAGCCGGTTGTTAAATTAGCTGACTAGTAACATGAGGCTTTAGTTCATCCATGGTTTACTCAACTTCATTAAATGAATTGTTTGTTTCATTAGAGTTCATATAATATGTAACTAAAACAAATTTCAAACTCAATACAGAGAAATTGATTATAAAGCTGCTAAATAAAGTAAATTGTTATTTCAAATGGAATATGTAAAGACAAAGGATGTAGAATTCTACTCTTATAGCATCAATTTCATATATAGCATGGAATCATTTAATGCAATTTTTAATGAAACTACTATATCTTGTTTTGAGTTTGTTTTTTTGTAACTTATGATGAATGTGTGCTGTGAGCTTTTAACATGCTGCAATGAGAAATCTTATTGTAGAAATTTTAGATGGTTGGGGCTGCAAATAAGTTAGAATTATCATATTTCCCCATTTCTTGTAGAAATAAGCGAATCTAAGCTTTCGTCTTTTTACACTTATCTTTTTTAATATACAGTAACTGATCGCTATTTTTTTCTTACTGATACTATTTTACTACGTATTCAAGGGTTACCTGGAAGAGTCTGCTCAAACACCTTCAAACAACCATGAACTGCTTGGTGATTCAGTAGCTTGGGGTGGTTGCACAATTGTCTACCTGCTCGGGCAACAGCTACATTTTGAGCTGTTTGATTTTTCGTACCAACTCTTGAATATAGCTGAGGCAGAGGATGGAACAGTTGTGCAAGCTCATAAGAATTCCCATTATATGCAGGTTTGAAATTATAGTTTTTTTCTTTTTTTCACAAGATACAAACTCGACAAGGGAGTGAATGAAAAGAAAATGAAAAGATTACAATGGAAAAATAAAAGCATGCCAATTTGAGGCATAAGTTTGGAGAGAGACAGAGAGCACATGCTGATGGAGAAAGGGAAACCGAAGAGAGCTTCCTCTTCAGTGAATGTGCCATTAAGAATAGTCCAAACTAGACCGTTCATACGTTTGGGACTTTGGATTTCCATAATGTTTAGTGGACTTCATTGTCCATAGGAAGTTATTGGTTCAAATTAAGCTTCCCCGGTCGCATACAATTTATTTGTTTCTCATCAAAGGGAAAAAAATGTCGATTACAACTTATTCTTGAGCAACAGCAATAAGAACTCAGCCAGATATACATACTATTTGGTTATTTTGTCCTGAATCTTAAATGTCTAATAAACAATAGCAATAAGGAAGTACGTACATGTTTGAAAAGTTATGCATTTTCAACTACTCTTGCATTGTGACGATTGTATTTTGTCATAATCTGTTCCATGTTTTCTCATCAATTAGTTTCATTTTTCGGCTTTATGGACCCCGTTTTCTATATGCAGGGATGGGAGTCGTTGATAGAAGCCATGAAGAAGGCGAGAAGATTGAACAACCATGTATTCTCAATGCTGAAGGCACGTTGTCCTCTTGAAGACAAGACTGCCTGTGCCATCAAGCAGAGTGGAGCTCCTCTTCATCGTATTAAATTTGAGAACACTGTCTCTGCTTTTGAGACACTGCCCCAGAAGGGTGCAGTCAACTAA

mRNA sequence

ATGCAGACAGCACCTTGGTTAGGGATAATTCCAGGTGCTGATGGGCAAATATTGCATTCTCAAGATGGAGATAGCCCTATTGTAAACCTATTCAAGTCGGCAACAAGTGCAATTGTTTCAAATCCTGGAAACCCTAATGGAATGTTATACTATACCATGTCAAAACAGGCTGAAGCAGCAGATCTTCTGTACAAATCTAACTTGAACACTGGGAGTGTTCTAGAATATGCACTTGCCTTTACAAGTGCTGCTCTGGATAAATACTGTAGCAAATGGAGTGCTGCTCCCAAGACTGGATTCATTGACATCACTACTTCCAAAGATTTCTATAGGATATATAGTGGACTCCAAATAGGTTACCTGGAAGAGTCTGCTCAAACACCTTCAAACAACCATGAACTGCTTGGTGATTCAGTAGCTTGGGGTGGTTGCACAATTGTCTACCTGCTCGGGCAACAGCTACATTTTGAGCTGTTTGATTTTTCGTACCAACTCTTGAATATAGCTGAGGCAGAGGATGGAACAGTTGTGCAAGCTCATAAGAATTCCCATTATATGCAGGGATGGGAGTCGTTGATAGAAGCCATGAAGAAGGCGAGAAGATTGAACAACCATGTATTCTCAATGCTGAAGGCACGTTGTCCTCTTGAAGACAAGACTGCCTGTGCCATCAAGCAGAGTGGAGCTCCTCTTCATCGTATTAAATTTGAGAACACTGTCTCTGCTTTTGAGACACTGCCCCAGAAGGGTGCAGTCAACTAA

Coding sequence (CDS)

ATGCAGACAGCACCTTGGTTAGGGATAATTCCAGGTGCTGATGGGCAAATATTGCATTCTCAAGATGGAGATAGCCCTATTGTAAACCTATTCAAGTCGGCAACAAGTGCAATTGTTTCAAATCCTGGAAACCCTAATGGAATGTTATACTATACCATGTCAAAACAGGCTGAAGCAGCAGATCTTCTGTACAAATCTAACTTGAACACTGGGAGTGTTCTAGAATATGCACTTGCCTTTACAAGTGCTGCTCTGGATAAATACTGTAGCAAATGGAGTGCTGCTCCCAAGACTGGATTCATTGACATCACTACTTCCAAAGATTTCTATAGGATATATAGTGGACTCCAAATAGGTTACCTGGAAGAGTCTGCTCAAACACCTTCAAACAACCATGAACTGCTTGGTGATTCAGTAGCTTGGGGTGGTTGCACAATTGTCTACCTGCTCGGGCAACAGCTACATTTTGAGCTGTTTGATTTTTCGTACCAACTCTTGAATATAGCTGAGGCAGAGGATGGAACAGTTGTGCAAGCTCATAAGAATTCCCATTATATGCAGGGATGGGAGTCGTTGATAGAAGCCATGAAGAAGGCGAGAAGATTGAACAACCATGTATTCTCAATGCTGAAGGCACGTTGTCCTCTTGAAGACAAGACTGCCTGTGCCATCAAGCAGAGTGGAGCTCCTCTTCATCGTATTAAATTTGAGAACACTGTCTCTGCTTTTGAGACACTGCCCCAGAAGGGTGCAGTCAACTAA

Protein sequence

MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEAADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGYLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAHKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTVSAFETLPQKGAVN
Homology
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BLAST of Cla001542 vs. Swiss-Prot
Match: PIR_ARATH (Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2)

HSP 1 Score: 409.5 bits (1051), Expect = 2.8e-113
Identity = 195/252 (77.38%), Postives = 218/252 (86.51%), Query Frame = 1 

Query: 1    MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEAA 60
            MQTAPWLG+IPGA+GQI+++QDG+SP+VNL KSATSA+VS+PG  N   +YTMSKQAEAA
Sbjct: 1030 MQTAPWLGLIPGAEGQIVNAQDGESPLVNLLKSATSAVVSSPGCLNPAAFYTMSKQAEAA 1089

Query: 61   DLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 120
            DLLYK+N+N GSVLEY LAFTSA+LDKYCSKWSA PKTGF+DITTSKDFYRIY GLQIGY
Sbjct: 1090 DLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFVDITTSKDFYRIYGGLQIGY 1149

Query: 121  LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 180
            LEE     S  HE+LGDS+AWGGCTI+YLLGQQLHFELFDFSYQ+LN++E E  +    H
Sbjct: 1150 LEEITAPQSAQHEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEVETVSASHTH 1209

Query: 181  KNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTV 240
            +N    QGWE L+E MKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL R++FENTV
Sbjct: 1210 RNPQIHQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLPRVRFENTV 1269

Query: 241  SAFETLPQKGAV 253
            SAFETLPQKG V
Sbjct: 1270 SAFETLPQKGTV 1281

[Close]
BLAST of Cla001542 vs. Swiss-Prot
Match: PIRA_DICDI (Protein pirA OS=Dictyostelium discoideum GN=pirA PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-18
Identity = 66/220 (30.00%), Postives = 103/220 (46.82%), Query Frame = 1 

Query: 2    QTAPWLGIIPGADGQILHSQDG---DSPIVNLFKSATSAIVSNPG-NPNGMLYYTMSKQA 61
            + AP+LGI P     +  S +     SP+ +  +     + S P    +      M   A
Sbjct: 1018 KAAPFLGITPETWKDLEPSTEDPTLQSPLYSQLQKLAQLLESRPEVAKSSQSLNDMVANA 1077

Query: 62   EAADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPK-TGFIDITTSKDFYRIYSGL 121
              AD  Y+ +    S+ +  L   S+ L+     WS AP   G I + +S +FYR++S L
Sbjct: 1078 WRADKFYRPSEQNFSLFKSVLQRFSSILNIVRHDWSGAPPDNGVICVDSSTEFYRLWSAL 1137

Query: 122  QIGYLEE-SAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGT 181
            Q       S +   + HEL GD + W GC++++ LGQQ  FELFDF Y +LN+ EA    
Sbjct: 1138 QFVICWPLSNENDKSFHELFGDGLMWAGCSLIHFLGQQYRFELFDFCYHILNVEEA---A 1197

Query: 182  VVQAHKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCP 216
             V++ K        ++  +  +  + +NN +FS+L   CP
Sbjct: 1198 AVRSDK-----PALKNFFKNAQIIKDINNQIFSILNTYCP 1229

[Close]
BLAST of Cla001542 vs. Swiss-Prot
Match: CYFP2_HUMAN (Cytoplasmic FMR1-interacting protein 2 OS=Homo sapiens GN=CYFIP2 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 8.8e-11
Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 1 

Query: 57   AEAADLLYKSNLNTG-SVLEYALAFTSAALDKYCSKWSAAPKT-GFIDITTSKDFYRIYS 116
            A   DLL K  L  G S+ E  L    + L      W   P T G + +    +F+R++S
Sbjct: 1099 AREGDLLTKERLCCGLSMFEVILTRIRSYLQDPI--WRGPPPTNGVMHVDECVEFHRLWS 1158

Query: 117  GLQIGYLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDG 176
             +Q  Y            +  GD + W GC+I+ LLGQQ  F+LFDF Y LL + + +DG
Sbjct: 1159 AMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKV-QRQDG 1218

Query: 177  TVVQAHKNSHYMQGWESLIEAMKKARRLNNHVFSML 211
               +  KN       + + + ++K + LNN VF++L
Sbjct: 1219 K-DEIIKNVPL----KKMADRIRKYQILNNEVFAIL 1246

[Close]
BLAST of Cla001542 vs. Swiss-Prot
Match: CYFP2_MOUSE (Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus GN=Cyfip2 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 8.8e-11
Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 1 

Query: 57   AEAADLLYKSNLNTG-SVLEYALAFTSAALDKYCSKWSAAPKT-GFIDITTSKDFYRIYS 116
            A   DLL K  L  G S+ E  L    + L      W   P T G + +    +F+R++S
Sbjct: 1074 AREGDLLTKERLCCGLSMFEVILTRIRSYLQDPI--WRGPPPTNGVMHVDECVEFHRLWS 1133

Query: 117  GLQIGYLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDG 176
             +Q  Y            +  GD + W GC+I+ LLGQQ  F+LFDF Y LL + + +DG
Sbjct: 1134 AMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKV-QRQDG 1193

Query: 177  TVVQAHKNSHYMQGWESLIEAMKKARRLNNHVFSML 211
               +  KN       + + + ++K + LNN VF++L
Sbjct: 1194 K-DEIIKNVPL----KKMADRIRKYQILNNEVFAIL 1221

[Close]
BLAST of Cla001542 vs. Swiss-Prot
Match: CYFP2_PONAB (Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii GN=CYFIP2 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.8e-11
Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 1 

Query: 57   AEAADLLYKSNLNTG-SVLEYALAFTSAALDKYCSKWSAAPKT-GFIDITTSKDFYRIYS 116
            A   DLL K  L  G S+ E  L    + L      W   P T G + +    +F+R++S
Sbjct: 1074 AREGDLLTKERLCCGLSMFEVILTRIRSYLQDPI--WRGPPPTNGVMHVDECVEFHRLWS 1133

Query: 117  GLQIGYLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDG 176
             +Q  Y            +  GD + W GC+I+ LLGQQ  F+LFDF Y LL + + +DG
Sbjct: 1134 AMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKV-QRQDG 1193

Query: 177  TVVQAHKNSHYMQGWESLIEAMKKARRLNNHVFSML 211
               +  KN       + + + ++K + LNN VF++L
Sbjct: 1194 K-DEIIKNVPL----KKMADRIRKYQILNNEVFAIL 1221

[Close]
BLAST of Cla001542 vs. TrEMBL
Match: A0A0A0LWT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G587440 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.7e-138
Identity = 246/253 (97.23%), Postives = 248/253 (98.02%), Query Frame = 1 

Query: 1   MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEAA 60
           MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSA SAIVSNPGNPNGM YYTMSKQAEAA
Sbjct: 658 MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSAASAIVSNPGNPNGMSYYTMSKQAEAA 717

Query: 61  DLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 120
           DLLYKSNLNTG VLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY
Sbjct: 718 DLLYKSNLNTGCVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 777

Query: 121 LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 180
           LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH
Sbjct: 778 LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 837

Query: 181 KNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTV 240
           K+SHY+QGWE LIEAMKKARRLNNHVFSMLKARCPLEDK ACAIKQSGAPLHRIKFENTV
Sbjct: 838 KSSHYIQGWELLIEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQSGAPLHRIKFENTV 897

Query: 241 SAFETLPQKGAVN 254
           SAFETLPQKGAVN
Sbjct: 898 SAFETLPQKGAVN 910

[Close]
BLAST of Cla001542 vs. TrEMBL
Match: B9IPF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s04210g PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.3e-122
Identity = 218/252 (86.51%), Postives = 234/252 (92.86%), Query Frame = 1 

Query: 1   MQTAPWLGIIPGADGQILHSQDG-DSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEA 60
           MQTAPWLG+ PGADGQILHSQDG DSP+VNLFKSAT+AIVSNPG PN   +YTMSKQAEA
Sbjct: 24  MQTAPWLGLFPGADGQILHSQDGGDSPVVNLFKSATAAIVSNPGCPNPTSFYTMSKQAEA 83

Query: 61  ADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 120
           ADLLYK+++NTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG
Sbjct: 84  ADLLYKASMNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 143

Query: 121 YLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQA 180
           +LE+S Q  SNN E+LGDSVAWGGCTI+YLLGQQ+HFELFDFSYQ+LNIAE E G + QA
Sbjct: 144 HLEDSVQVSSNNFEVLGDSVAWGGCTIIYLLGQQMHFELFDFSYQVLNIAEVEAGLLSQA 203

Query: 181 HKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 240
           HKN H  QGWE+L+EAMKKARRLNNHVFSMLKARCPLEDK ACAIKQSGAPLHRIKFENT
Sbjct: 204 HKNPHAAQGWETLLEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQSGAPLHRIKFENT 263

Query: 241 VSAFETLPQKGA 252
           VSAFETLPQKGA
Sbjct: 264 VSAFETLPQKGA 275

[Close]
BLAST of Cla001542 vs. TrEMBL
Match: B9S7R0_RICCO (Protein PIR, putative OS=Ricinus communis GN=RCOM_0611030 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-121
Identity = 215/252 (85.32%), Postives = 234/252 (92.86%), Query Frame = 1 

Query: 1   MQTAPWLGIIPGADGQILHSQDG-DSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEA 60
           MQTAPWLG++P ADGQILHSQDG DSP+VNLFKS+ +A+VSNPG PN   ++TMSKQAEA
Sbjct: 706 MQTAPWLGLVPAADGQILHSQDGGDSPLVNLFKSSITAMVSNPGCPNPSTFFTMSKQAEA 765

Query: 61  ADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 120
           ADLLYK+NLNTGSVLEYALAFTSAALDKYC+KWSAAPKTGFIDITTSKDFYRIYSGLQIG
Sbjct: 766 ADLLYKANLNTGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITTSKDFYRIYSGLQIG 825

Query: 121 YLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQA 180
           YLEES +   NNHE+LGDSVAWGGCTI+YLLGQQLHFELFDFSYQ+LN+AE E G++ Q 
Sbjct: 826 YLEESDKQSFNNHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNVAEVEAGSLSQM 885

Query: 181 HKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 240
           H+N H  QGWESL+EAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT
Sbjct: 886 HRNPHLSQGWESLLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 945

Query: 241 VSAFETLPQKGA 252
           VSAFETLPQKGA
Sbjct: 946 VSAFETLPQKGA 957

[Close]
BLAST of Cla001542 vs. TrEMBL
Match: V4VTN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023801mg PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.3e-121
Identity = 215/251 (85.66%), Postives = 235/251 (93.63%), Query Frame = 1 

Query: 1    MQTAPWLGIIPGADGQILHSQDG-DSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEA 60
            MQTAPWLG +PGADGQI + QDG DSP+VNLFKSAT+AIVSNPG PN   ++TMSKQAEA
Sbjct: 1012 MQTAPWLGFLPGADGQISYHQDGGDSPVVNLFKSATAAIVSNPGCPNPTSFHTMSKQAEA 1071

Query: 61   ADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 120
            ADLLYK+N+NTGSVLEYALAFTSAALDKYCSKWSA PKTGFIDITTSKDFYRIYSGLQIG
Sbjct: 1072 ADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSATPKTGFIDITTSKDFYRIYSGLQIG 1131

Query: 121  YLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQA 180
            YLEES+QTPSNNH++LGDSVAWGGCTI+YLLGQQLHFELFDFSYQ+LN+AE E  +V Q+
Sbjct: 1132 YLEESSQTPSNNHKVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNVAEVEAISVPQS 1191

Query: 181  HKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 240
             K+ H+ QGWE+LIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT
Sbjct: 1192 QKHPHFGQGWEALIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 1251

Query: 241  VSAFETLPQKG 251
            VSAFETLPQ+G
Sbjct: 1252 VSAFETLPQRG 1262

[Close]
BLAST of Cla001542 vs. TrEMBL
Match: A0A067EBQ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000772mg PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 9.5e-121
Identity = 214/251 (85.26%), Postives = 235/251 (93.63%), Query Frame = 1 

Query: 1   MQTAPWLGIIPGADGQILHSQDG-DSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEA 60
           MQTAPWLG +PGADGQI + QDG DSP+VNLFKSAT+AIVSNPG PN   ++TMSKQAEA
Sbjct: 661 MQTAPWLGFLPGADGQISYHQDGGDSPVVNLFKSATAAIVSNPGCPNPTSFHTMSKQAEA 720

Query: 61  ADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 120
           ADLLYK+N+NTGSVLEYALAFTSAALDKYCSKWSA PKTGFIDITTSKDFYRIYSGLQIG
Sbjct: 721 ADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSATPKTGFIDITTSKDFYRIYSGLQIG 780

Query: 121 YLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQA 180
           YLEES+Q+PSNNH++LGDSVAWGGCTI+YLLGQQLHFELFDFSYQ+LN+AE E  +V Q+
Sbjct: 781 YLEESSQSPSNNHKVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNVAEVEAISVPQS 840

Query: 181 HKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 240
            K+ H+ QGWE+LIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT
Sbjct: 841 QKHPHFGQGWEALIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 900

Query: 241 VSAFETLPQKG 251
           VSAFETLPQ+G
Sbjct: 901 VSAFETLPQRG 911

[Close]
BLAST of Cla001542 vs. NCBI nr
Match: gi|659099938|ref|XP_008450850.1| (PREDICTED: protein PIR [Cucumis melo])

HSP 1 Score: 500.4 bits (1287), Expect = 1.9e-138
Identity = 245/253 (96.84%), Postives = 249/253 (98.42%), Query Frame = 1 

Query: 1    MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEAA 60
            MQTAPWLGIIPGADGQILHSQDGDSPIV+LFKSA SA+VSNPGNPNGM YYTMSKQAEAA
Sbjct: 1032 MQTAPWLGIIPGADGQILHSQDGDSPIVSLFKSAASAVVSNPGNPNGMSYYTMSKQAEAA 1091

Query: 61   DLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 120
            DLLYKSNLNTG VLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY
Sbjct: 1092 DLLYKSNLNTGCVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 1151

Query: 121  LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 180
            LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH
Sbjct: 1152 LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 1211

Query: 181  KNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTV 240
            K+S YMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHR+KFENTV
Sbjct: 1212 KSSQYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRVKFENTV 1271

Query: 241  SAFETLPQKGAVN 254
            SAFETLPQKGAVN
Sbjct: 1272 SAFETLPQKGAVN 1284

[Close]
BLAST of Cla001542 vs. NCBI nr
Match: gi|778662932|ref|XP_011659977.1| (PREDICTED: protein PIR [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 2.5e-138
Identity = 246/253 (97.23%), Postives = 248/253 (98.02%), Query Frame = 1 

Query: 1    MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEAA 60
            MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSA SAIVSNPGNPNGM YYTMSKQAEAA
Sbjct: 1032 MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSAASAIVSNPGNPNGMSYYTMSKQAEAA 1091

Query: 61   DLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 120
            DLLYKSNLNTG VLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY
Sbjct: 1092 DLLYKSNLNTGCVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 1151

Query: 121  LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 180
            LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH
Sbjct: 1152 LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 1211

Query: 181  KNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTV 240
            K+SHY+QGWE LIEAMKKARRLNNHVFSMLKARCPLEDK ACAIKQSGAPLHRIKFENTV
Sbjct: 1212 KSSHYIQGWELLIEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQSGAPLHRIKFENTV 1271

Query: 241  SAFETLPQKGAVN 254
            SAFETLPQKGAVN
Sbjct: 1272 SAFETLPQKGAVN 1284

[Close]
BLAST of Cla001542 vs. NCBI nr
Match: gi|700211137|gb|KGN66233.1| (hypothetical protein Csa_1G587440 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 2.5e-138
Identity = 246/253 (97.23%), Postives = 248/253 (98.02%), Query Frame = 1 

Query: 1   MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEAA 60
           MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSA SAIVSNPGNPNGM YYTMSKQAEAA
Sbjct: 658 MQTAPWLGIIPGADGQILHSQDGDSPIVNLFKSAASAIVSNPGNPNGMSYYTMSKQAEAA 717

Query: 61  DLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 120
           DLLYKSNLNTG VLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY
Sbjct: 718 DLLYKSNLNTGCVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIGY 777

Query: 121 LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 180
           LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH
Sbjct: 778 LEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQAH 837

Query: 181 KNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTV 240
           K+SHY+QGWE LIEAMKKARRLNNHVFSMLKARCPLEDK ACAIKQSGAPLHRIKFENTV
Sbjct: 838 KSSHYIQGWELLIEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQSGAPLHRIKFENTV 897

Query: 241 SAFETLPQKGAVN 254
           SAFETLPQKGAVN
Sbjct: 898 SAFETLPQKGAVN 910

[Close]
BLAST of Cla001542 vs. NCBI nr
Match: gi|224144661|ref|XP_002325366.1| (hypothetical protein POPTR_0019s04210g [Populus trichocarpa])

HSP 1 Score: 446.4 bits (1147), Expect = 3.2e-122
Identity = 218/252 (86.51%), Postives = 234/252 (92.86%), Query Frame = 1 

Query: 1   MQTAPWLGIIPGADGQILHSQDG-DSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEA 60
           MQTAPWLG+ PGADGQILHSQDG DSP+VNLFKSAT+AIVSNPG PN   +YTMSKQAEA
Sbjct: 24  MQTAPWLGLFPGADGQILHSQDGGDSPVVNLFKSATAAIVSNPGCPNPTSFYTMSKQAEA 83

Query: 61  ADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 120
           ADLLYK+++NTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG
Sbjct: 84  ADLLYKASMNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 143

Query: 121 YLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQA 180
           +LE+S Q  SNN E+LGDSVAWGGCTI+YLLGQQ+HFELFDFSYQ+LNIAE E G + QA
Sbjct: 144 HLEDSVQVSSNNFEVLGDSVAWGGCTIIYLLGQQMHFELFDFSYQVLNIAEVEAGLLSQA 203

Query: 181 HKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 240
           HKN H  QGWE+L+EAMKKARRLNNHVFSMLKARCPLEDK ACAIKQSGAPLHRIKFENT
Sbjct: 204 HKNPHAAQGWETLLEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQSGAPLHRIKFENT 263

Query: 241 VSAFETLPQKGA 252
           VSAFETLPQKGA
Sbjct: 264 VSAFETLPQKGA 275

[Close]
BLAST of Cla001542 vs. NCBI nr
Match: gi|1000959168|ref|XP_002522029.2| (PREDICTED: protein PIR [Ricinus communis])

HSP 1 Score: 444.1 bits (1141), Expect = 1.6e-121
Identity = 215/252 (85.32%), Postives = 234/252 (92.86%), Query Frame = 1 

Query: 1    MQTAPWLGIIPGADGQILHSQDG-DSPIVNLFKSATSAIVSNPGNPNGMLYYTMSKQAEA 60
            MQTAPWLG++P ADGQILHSQDG DSP+VNLFKS+ +A+VSNPG PN   ++TMSKQAEA
Sbjct: 1032 MQTAPWLGLVPAADGQILHSQDGGDSPLVNLFKSSITAMVSNPGCPNPSTFFTMSKQAEA 1091

Query: 61   ADLLYKSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSKDFYRIYSGLQIG 120
            ADLLYK+NLNTGSVLEYALAFTSAALDKYC+KWSAAPKTGFIDITTSKDFYRIYSGLQIG
Sbjct: 1092 ADLLYKANLNTGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITTSKDFYRIYSGLQIG 1151

Query: 121  YLEESAQTPSNNHELLGDSVAWGGCTIVYLLGQQLHFELFDFSYQLLNIAEAEDGTVVQA 180
            YLEES +   NNHE+LGDSVAWGGCTI+YLLGQQLHFELFDFSYQ+LN+AE E G++ Q 
Sbjct: 1152 YLEESDKQSFNNHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNVAEVEAGSLSQM 1211

Query: 181  HKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 240
            H+N H  QGWESL+EAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT
Sbjct: 1212 HRNPHLSQGWESLLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENT 1271

Query: 241  VSAFETLPQKGA 252
            VSAFETLPQKGA
Sbjct: 1272 VSAFETLPQKGA 1283

The following BLAST results are available for this feature:
BLAST of Cla001542 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PIR_ARATH2.8e-11377.38Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2[more]
PIRA_DICDI2.6e-1830.00Protein pirA OS=Dictyostelium discoideum GN=pirA PE=1 SV=1[more]
CYFP2_HUMAN8.8e-1132.05Cytoplasmic FMR1-interacting protein 2 OS=Homo sapiens GN=CYFIP2 PE=1 SV=2[more]
CYFP2_MOUSE8.8e-1132.05Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus GN=Cyfip2 PE=1 SV=2[more]
CYFP2_PONAB8.8e-1132.05Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii GN=CYFIP2 PE=2 SV=1[more]
BLAST of Cla001542 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWT2_CUCSA1.7e-13897.23Uncharacterized protein OS=Cucumis sativus GN=Csa_1G587440 PE=4 SV=1[more]
B9IPF8_POPTR2.3e-12286.51Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s04210g PE=4 SV=1[more]
B9S7R0_RICCO1.1e-12185.32Protein PIR, putative OS=Ricinus communis GN=RCOM_0611030 PE=4 SV=1[more]
V4VTN6_9ROSI3.3e-12185.66Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023801mg PE=4 SV=1[more]
A0A067EBQ3_CITSI9.5e-12185.26Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000772mg PE=4 SV=1[more]
BLAST of Cla001542 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099938|ref|XP_008450850.1|1.9e-13896.84PREDICTED: protein PIR [Cucumis melo][more]
gi|778662932|ref|XP_011659977.1|2.5e-13897.23PREDICTED: protein PIR [Cucumis sativus][more]
gi|700211137|gb|KGN66233.1|2.5e-13897.23hypothetical protein Csa_1G587440 [Cucumis sativus][more]
gi|224144661|ref|XP_002325366.1|3.2e-12286.51hypothetical protein POPTR_0019s04210g [Populus trichocarpa][more]
gi|1000959168|ref|XP_002522029.2|1.6e-12185.32PREDICTED: protein PIR [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU13795watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU60334watermelon EST collection version 2.0transcribed_cluster
WMU68909watermelon EST collection version 2.0transcribed_cluster
WMU79397watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001542Cla001542.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU13795WMU13795transcribed_cluster
WMU60334WMU60334transcribed_cluster
WMU68909WMU68909transcribed_cluster
WMU79397WMU79397transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPIRPIRSF008153CYFIPcoord: 1..253
score: 9.0
IPR008081Cytoplasmic FMR1-interactingPANTHERPTHR12195P53 INDUCIBLE PROTEIN-RELATEDcoord: 1..239
score: 1.3E
IPR008081Cytoplasmic FMR1-interactingPFAMPF05994FragX_IPcoord: 1..210
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001542Cla97C03G061810Watermelon (97103) v2wmwmbB133
Cla001542Lsi06G007570Bottle gourd (USVL1VR-Ls)lsiwmB398
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001542Silver-seed gourdcarwmB0912
Cla001542Cucumber (Chinese Long) v3cucwmB037
Cla001542Melon (DHL92) v3.5.1mewmB268
Cla001542Watermelon (Charleston Gray)wcgwmB233
Cla001542Cucumber (Chinese Long) v2cuwmB030
Cla001542Cucumber (Gy14) v2cgybwmB031