Cla001532 (gene) Watermelon (97103) v1

NameCla001532
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionReverse transcriptase family protein (AHRD V1 *--- Q2AA00_ASPOF)
LocationChr6 : 16793769 .. 16795025 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAAACTCTTAGACGCATGCCTCAACAAGCCAATGCATCAATTCTCATGCTTGGGCTCGGCTACCCAAGGTCTTCACCTATTTTCCAATCATGACCCATGCTCACTCTCATGGACTCATACCTCAACCCAGCCAACGCATAGCCACTTAAGCCAAAGGCTCTTGGCCATCTTTTTCTTAATCACCCGCCTACTTTACTTGCCATCTTCCAAAGATAAGAGTAGGGCTTACATAAAGGCCAACACTTTGTTTCATATTATAGACTCAAGGACAACTTATAAGTTGTTGCTAGGGCATCCTTGGATTCATGGAAATGGAGTGATAACATCAACATTGCATAAGTGCTTCAAGTTTTATCAAGAAGACATTAAGAAGGTTGAAGCATACTCTAATCCATTCTCAAAAGTCGAGTCTCACTTTGCAGACGCAAAGTTTTACCTTAAGAATGATAACATCAATCAGGTGACAGAGATTCCTTTAATAAAAAGCGAGGATAAATCCCAGTCAAAGTCACAGACAGATGCAAGAAAGGAACCTAGTGAAGGGATGGCTGCCTTTTACTCTCAAAAGGATGAGGCATCCACCAACTTTGCAAAGCCTAAAACTTTGAAAAATGAAAAAGTTACAAGTTCTTTAGTCTTATGTTATGTCCCTTTGTCAAGACGTAAGAAGAGAGAGTCTCCATTTGTAGAGTGCTCGAAGGGCTTGAAGGTTGGTGATATTGAAATCCTAAAAGAAAGTTTCGTTATGCTGCTTACTAGTATCGCAAAGCAAGAAGTTCAAGAACCAAGAGTGGACCAGACAAAAGTGAATTTGCCCGAGAGATGGACAAAGAATGGCTTCGGCCTAAGTGCTTATAAACTATTGGCAAAGGCGGGCTACAACTTCATGACCCACACTAAGTTCGAGAGCCTGAAAATTTATGAGCAACCTGAGCTTTCTCTGTCCCAGAAAAGCTGCTATAGGAGGGGTATGCTATACCTCCTTCGAGCAAAAGGACTTGGATATAAGCCTCCCGAGCCAGTTTGCATAACCAGAAAGGGGAAGGAAAAAGTGGTTGACAGTAACCATATAACGGACGAGGAGGTCGATGATTCGAAAGAAAAAGAAAGCAATGGTCAAAGAACCTCAGTCTTTGATCAAATTAGACCGCCTATCGCACGTGTTTTGGTCTTTGAAAGGCTACGTATGATGGCAGTGGAAGAAGAAAACCAGCCCCTAATGCCCAGCCTCGATCGACGCTCAGTTTTTTGA

mRNA sequence

ATGCTCAAACTCTTAGACGCATGCCTCAACAAGCCAATGCATCAATTCTCATGCTTGGGCTCGGCTACCCAAGGTCTTCACCTATTTTCCAATCATGACCCATGCTCACTCTCATGGACTCATACCTCAACCCAGCCAACGCATAGCCACTTAAGCCAAAGGCTCTTGGCCATCTTTTTCTTAATCACCCGCCTACTTTACTTGCCATCTTCCAAAGATAAGAGTAGGGCTTACATAAAGGCCAACACTTTGTTTCATATTATAGACTCAAGGACAACTTATAAGTTGTTGCTAGGGCATCCTTGGATTCATGGAAATGGAGTGATAACATCAACATTGCATAAGTGCTTCAAGTTTTATCAAGAAGACATTAAGAAGGTTGAAGCATACTCTAATCCATTCTCAAAAGTCGAGTCTCACTTTGCAGACGCAAAGTTTTACCTTAAGAATGATAACATCAATCAGGTGACAGAGATTCCTTTAATAAAAAGCGAGGATAAATCCCAGTCAAAGTCACAGACAGATGCAAGAAAGGAACCTAGTGAAGGGATGGCTGCCTTTTACTCTCAAAAGGATGAGGCATCCACCAACTTTGCAAAGCCTAAAACTTTGAAAAATGAAAAAGTTACAAGTTCTTTAGTCTTATGTTATGTCCCTTTGTCAAGACGTAAGAAGAGAGAGTCTCCATTTGTAGAGTGCTCGAAGGGCTTGAAGGTTGGTGATATTGAAATCCTAAAAGAAAGTTTCGTTATGCTGCTTACTAGTATCGCAAAGCAAGAAGTTCAAGAACCAAGAGTGGACCAGACAAAAGTGAATTTGCCCGAGAGATGGACAAAGAATGGCTTCGGCCTAAGTGCTTATAAACTATTGGCAAAGGCGGGCTACAACTTCATGACCCACACTAAGTTCGAGAGCCTGAAAATTTATGAGCAACCTGAGCTTTCTCTGTCCCAGAAAAGCTGCTATAGGAGGGGTATGCTATACCTCCTTCGAGCAAAAGGACTTGGATATAAGCCTCCCGAGCCAGTTTGCATAACCAGAAAGGGGAAGGAAAAAGTGGTTGACAGTAACCATATAACGGACGAGGAGGTCGATGATTCGAAAGAAAAAGAAAGCAATGGTCAAAGAACCTCAGTCTTTGATCAAATTAGACCGCCTATCGCACGTGTTTTGGTCTTTGAAAGGCTACGTATGATGGCAGTGGAAGAAGAAAACCAGCCCCTAATGCCCAGCCTCGATCGACGCTCAGTTTTTTGA

Coding sequence (CDS)

ATGCTCAAACTCTTAGACGCATGCCTCAACAAGCCAATGCATCAATTCTCATGCTTGGGCTCGGCTACCCAAGGTCTTCACCTATTTTCCAATCATGACCCATGCTCACTCTCATGGACTCATACCTCAACCCAGCCAACGCATAGCCACTTAAGCCAAAGGCTCTTGGCCATCTTTTTCTTAATCACCCGCCTACTTTACTTGCCATCTTCCAAAGATAAGAGTAGGGCTTACATAAAGGCCAACACTTTGTTTCATATTATAGACTCAAGGACAACTTATAAGTTGTTGCTAGGGCATCCTTGGATTCATGGAAATGGAGTGATAACATCAACATTGCATAAGTGCTTCAAGTTTTATCAAGAAGACATTAAGAAGGTTGAAGCATACTCTAATCCATTCTCAAAAGTCGAGTCTCACTTTGCAGACGCAAAGTTTTACCTTAAGAATGATAACATCAATCAGGTGACAGAGATTCCTTTAATAAAAAGCGAGGATAAATCCCAGTCAAAGTCACAGACAGATGCAAGAAAGGAACCTAGTGAAGGGATGGCTGCCTTTTACTCTCAAAAGGATGAGGCATCCACCAACTTTGCAAAGCCTAAAACTTTGAAAAATGAAAAAGTTACAAGTTCTTTAGTCTTATGTTATGTCCCTTTGTCAAGACGTAAGAAGAGAGAGTCTCCATTTGTAGAGTGCTCGAAGGGCTTGAAGGTTGGTGATATTGAAATCCTAAAAGAAAGTTTCGTTATGCTGCTTACTAGTATCGCAAAGCAAGAAGTTCAAGAACCAAGAGTGGACCAGACAAAAGTGAATTTGCCCGAGAGATGGACAAAGAATGGCTTCGGCCTAAGTGCTTATAAACTATTGGCAAAGGCGGGCTACAACTTCATGACCCACACTAAGTTCGAGAGCCTGAAAATTTATGAGCAACCTGAGCTTTCTCTGTCCCAGAAAAGCTGCTATAGGAGGGGTATGCTATACCTCCTTCGAGCAAAAGGACTTGGATATAAGCCTCCCGAGCCAGTTTGCATAACCAGAAAGGGGAAGGAAAAAGTGGTTGACAGTAACCATATAACGGACGAGGAGGTCGATGATTCGAAAGAAAAAGAAAGCAATGGTCAAAGAACCTCAGTCTTTGATCAAATTAGACCGCCTATCGCACGTGTTTTGGTCTTTGAAAGGCTACGTATGATGGCAGTGGAAGAAGAAAACCAGCCCCTAATGCCCAGCCTCGATCGACGCTCAGTTTTTTGA

Protein sequence

MLKLLDACLNKPMHQFSCLGSATQGLHLFSNHDPCSLSWTHTSTQPTHSHLSQRLLAIFFLITRLLYLPSSKDKSRAYIKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVESHFADAKFYLKNDNINQVTEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEASTNFAKPKTLKNEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFVMLLTSIAKQEVQEPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTKFESLKIYEQPELSLSQKSCYRRGMLYLLRAKGLGYKPPEPVCITRKGKEKVVDSNHITDEEVDDSKEKESNGQRTSVFDQIRPPIARVLVFERLRMMAVEEENQPLMPSLDRRSVF
BLAST of Cla001532 vs. TrEMBL
Match: A5C5C0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007094 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.4e-28
Identity = 99/291 (34.02%), Postives = 157/291 (53.95%), Query Frame = 1

Query: 124 IKKVEAYSNPFSKVESHFADAKFYLKNDNINQVTEIPLIKSEDKSQSKSQTDARKEP-SE 183
           +KKVE  + PF+KVES+FADAKFY++ND + +V    +I S  K++ K + +  K   +E
Sbjct: 95  VKKVEVDTKPFTKVESYFADAKFYIENDVMEEVLP-TIIPSTXKAKLKGKVEQCKSTLAE 154

Query: 184 GMAAFYSQKDEASTNFAKPKTLKNEKVTSSLVLCYVPLSRRKKRESPFVECS-----KGL 243
            ++     + E     ++  T+    V +S V   +P SRR + + PF+E       + L
Sbjct: 155 KISQPMMNRIEEKGKSSQTATMDLMIVXTSPVFKCIPRSRRSEGQPPFIEDKSEVQPRRL 214

Query: 244 KVGDIEILKESFVMLLTSI-------AKQEVQEPRVDQTKVNL-PERWTKNGFGLSAYKL 303
           + GD+++LKE   +LL ++        ++ ++  R DQTK  L P +    GF   AYKL
Sbjct: 215 ENGDLQVLKEVVTILLPNLQLIFRDDTQKSIKSLR-DQTKKELFPIKKIDEGFNPKAYKL 274

Query: 304 LAKAGYNFMTHTKFESLKI----YEQPELSLSQKSCYRRGMLYLLRAKGLGYKPPEPVCI 363
           LAKAGY+F++ ++   L       +   L+ +Q+   ++G       +GLG+ P EP+ I
Sbjct: 275 LAKAGYDFISSSQLGELSPETTGXKMHGLNETQRKLKQQGYAVKHSMEGLGFIPFEPIKI 334

Query: 364 TRKGKEKVVDSNHITDEEVDDSKEKESNGQRTSVFDQIRPPIARVLVFERL 397
           + K K+    + HI  E +D+S    S  Q  SVFDQI  PI + LVF RL
Sbjct: 335 STKTKKTKASTQHIIVEYMDESSXSNSPPQ-ISVFDQIEAPIVQALVFTRL 382

BLAST of Cla001532 vs. TrEMBL
Match: A0A0K9RSA4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040670 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.8e-27
Identity = 84/284 (29.58%), Postives = 141/284 (49.65%), Query Frame = 1

Query: 83  TLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVESHFA 142
           T+FH+IDS T+Y+LLLG PW+H NGV+ STLH+CFK+Y+   +KV A   PFS+ ESHFA
Sbjct: 144 TIFHVIDSNTSYRLLLGRPWMHENGVVASTLHQCFKYYRNGERKVNADVKPFSEAESHFA 203

Query: 143 DAKFYLKNDNINQVTEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEASTNFAKPK 202
           DAKFY       +V    +  +      K Q+   ++PS        +    + +  K K
Sbjct: 204 DAKFYASQGEPVEVMPTEIASTGKVMPKKLQSTVEEKPSRNAL----EPSHETVDEKKTK 263

Query: 203 TLKNEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFVMLLTSIAKQEVQ 262
            + +++V  +      P S    ++ P  E  K +    + + K S   +LTS      +
Sbjct: 264 EIPSQRVEEN------PRSAVTVKDMP-QEFDKSM---TLPVHKISDPKILTSPTPNSTK 323

Query: 263 EPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTKFESLKIYEQPELSLSQKSCY 322
            P    ++        K+GF   AYKL+  +GY F        L   +   L+ +Q+   
Sbjct: 324 SPETPSSR--------KDGFDPVAYKLMENSGYGFSNPEPMGKLVEDKSYGLNKTQQKLQ 383

Query: 323 RRGMLYLLRAKGLGYKPPEPVCITRKGKEKVVDSNHITDEEVDD 367
           ++G    ++  GLG+K  +P+ I+ + +  +  S +I  +E+++
Sbjct: 384 QQGERVWVKKVGLGFKESKPIIISGR-RRSMQASQYIGVQEIEE 404

BLAST of Cla001532 vs. TrEMBL
Match: M1DNM7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400041468 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-24
Identity = 94/323 (29.10%), Postives = 166/323 (51.39%), Query Frame = 1

Query: 79  IKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDI-KKVEAYSNPFSKV 138
           ++++   H+ID++T+Y +LLG PW+H N +++S+ ++C K+ +  I +K+ A  NPF++V
Sbjct: 55  LRSSAWMHVIDAKTSYNILLGRPWVHENRIVSSSYYQCLKYLEGGIERKIIADDNPFTEV 114

Query: 139 ESHFADAKFYLKNDNIN--QVTEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEAS 198
           E+HFA AKFYLK+  +   +  +I  I S DK  SK   +A  + +          +E  
Sbjct: 115 ETHFAYAKFYLKSYIVKGAKANDIKPIMS-DKVISKRIDEAVGKVNVDTKGLCPILNEGQ 174

Query: 199 TNFAKPKTLKNEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFVMLLTS 258
              +K      +K+TS   LCYVP  ++++ +   ++    L+   + I +   + L + 
Sbjct: 175 IMSSK------KKLTSR--LCYVPKVKKEEGQPSNLQ-ENVLRGLTLPIRRIDAINLSSK 234

Query: 259 IAKQEVQEPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTKFESLKIYEQPEL- 318
           + ++ + + +V    V LP + T+ GF  +AYKL  KAGYN             ++P + 
Sbjct: 235 LPEKSISQNQV--RDVTLPTKRTREGFDSNAYKLFVKAGYN------------PDEPSML 294

Query: 319 -SLSQKSCYRRGMLYLLRAKGLGYKPPEPVCITRKGKEKVVDSNHITDEEVDDSKEKESN 378
             L  +   R+        +GLGY  P P+ I+ +       +NHIT E+     +  + 
Sbjct: 295 GKLVSEDTTRQA------REGLGYSQPPPIRISIRR----ASNNHITFED-----DVATP 338

Query: 379 GQRTSVFDQIRPPIARVLVFERL 397
            ++ SVFD++     R  VFERL
Sbjct: 355 NKKPSVFDRLGESTTRTSVFERL 338

BLAST of Cla001532 vs. TrEMBL
Match: A5B9U3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003694 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.2e-20
Identity = 44/78 (56.41%), Postives = 64/78 (82.05%), Query Frame = 1

Query: 79  IKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVE 138
           + +NTLF++ID++T+Y +LLG PW+H NG I STLH+CFKFY+  +KKVE  + PF++VE
Sbjct: 90  LSSNTLFYVIDAKTSYNVLLGRPWLHENGAIPSTLHQCFKFYKGGVKKVETDAKPFTEVE 149

Query: 139 SHFADAKFYLKNDNINQV 157
           S+F DAKFY++ND + +V
Sbjct: 150 SYFVDAKFYIENDAMEEV 167

BLAST of Cla001532 vs. TrEMBL
Match: A0A0K9RJK8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065000 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.4e-20
Identity = 60/163 (36.81%), Postives = 83/163 (50.92%), Query Frame = 1

Query: 81  ANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVESH 140
           A T+FH+IDS T+Y+LLLG PW+H NGV+ STLH+CFK+Y+   +KV A   PFS+ ESH
Sbjct: 254 ATTIFHVIDSNTSYRLLLGRPWMHENGVVASTLHQCFKYYRNGERKVNADVKPFSEAESH 313

Query: 141 FADAKFYLKNDNINQVTEIPLIKSEDKSQSKSQTDARKEPS-EGMAAFYSQKDEAST--- 200
           FADAKFY        V    +  +      K Q+   ++PS   +   +   DE  T   
Sbjct: 314 FADAKFYASQGEPVDVMPTEIASTGKVMPKKLQSTVEEKPSRNALEPSHETVDEKKTKEI 373

Query: 201 ----------NFAKPKTLKNEKVTSSLVLCYVPLSRRKKRESP 230
                      F K  TL   K++   +L     +  K  E+P
Sbjct: 374 PSQRVKDMPQEFDKSMTLPVHKISDPKILTSPTPNSTKSPETP 416

BLAST of Cla001532 vs. NCBI nr
Match: gi|778660504|ref|XP_011656345.1| (PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 9.2e-106
Identity = 209/342 (61.11%), Postives = 249/342 (72.81%), Query Frame = 1

Query: 79  IKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVE 138
           +KA+ LFH+IDSRTTYKLLLG PWIHGNGV+TSTLH+CFKFYQ+ +KKVEA SNPFS+ E
Sbjct: 296 LKASALFHVIDSRTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAE 355

Query: 139 SHFADAKFYLKNDNINQV--TEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEAST 198
           SHFADAKFY KN+NI +V   E PL K ED SQ KS   A  EP E    F S K E  T
Sbjct: 356 SHFADAKFYSKNNNILEVLPAETPLTKGEDNSQLKSL--ATTEPHESARTFNSGKGETYT 415

Query: 199 NFAKPKTLKNEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFVMLLTSI 258
              K   LK+E   ++ VL YVPLSRRKK ESPF+E  KGLKVGDIEI+KESF   LT I
Sbjct: 416 RNTKGMILKDENAANTPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKI 475

Query: 259 AKQEVQEPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTKFESLKIYEQPELSL 318
           AKQEV   +VD  + NLP+R TK+GF   AYKL+AKAGY+F  HT+F+SL+I+++PELS 
Sbjct: 476 AKQEV---KVDLVEANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEIHDRPELSS 535

Query: 319 SQKSCYRRGMLYLLRAKGLGYKPPEPVCITRKGKEKVVDSNHITDEEVDDSKEKESNGQR 378
           +QK   R G    +  KGLGYK PEP+ IT+KGKEKVVD NHIT EE D++  KE + QR
Sbjct: 536 TQKKLLREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQR 595

Query: 379 TSVFDQIRPPIARVLVFERLRMMAVEEENQPLMPSLDRRSVF 419
            SVFD+IRP +AR +VFERL M   E E    +P+L+R SVF
Sbjct: 596 ISVFDRIRPSVARPVVFERLSMTEAERERLQSVPNLERHSVF 632

BLAST of Cla001532 vs. NCBI nr
Match: gi|778697752|ref|XP_011654390.1| (PREDICTED: uncharacterized protein LOC105435379 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 8.8e-48
Identity = 122/300 (40.67%), Postives = 170/300 (56.67%), Query Frame = 1

Query: 79  IKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVE 138
           ++A T+FH+IDSRTTYK+LLGHPWIH NGV+ S LH+CFKFY++ ++K++  + PFSK E
Sbjct: 41  LQATTIFHVIDSRTTYKMLLGHPWIHENGVVISMLHQCFKFYKQGVRKIDTDTKPFSKAE 100

Query: 139 SHFADAKFYLKNDNINQV--TEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEAST 198
           SHF DAKFY K+D++++   +E+P+ K  D  + +  T   K+ +EG A      DE++T
Sbjct: 101 SHFVDAKFYTKDDDVSEFISSEVPVAK--DTYKLEQITITTKKSNEGDALKGQNNDESTT 160

Query: 199 NFAK--PK----TLKNEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFV 258
                 PK    TL  EK T   +L YVPLSRRK  ES   E  + L +G IEIL+ESF 
Sbjct: 161 QAKSEVPKSEKITLPQEKATKPPILRYVPLSRRKNGESSITEYPENLMIGSIEILEESFT 220

Query: 259 MLLTSIAKQEVQEPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTKFE-----S 318
             LT I K E +  +    +  LP+R    GF   AY L+AK GY+F T    +     S
Sbjct: 221 TPLTKIEKGETKRLKTKSVEAFLPKRRITGGFDQKAYTLMAKVGYDFTTLVNLKVLNTTS 280

Query: 319 LKIYEQPELSLSQKSCYRRGMLYLLRAKGLGYKPPEPVCITRKGKEKVVDS--NHITDEE 364
            KI        +++S ++R  + L R    G K P     ++ G     D   + I DEE
Sbjct: 281 KKIESASPTPNARESAFKRLNVSLTR----GQKKPYIAVSSKHGLAARNDEIRSSIEDEE 334

BLAST of Cla001532 vs. NCBI nr
Match: gi|659074577|ref|XP_008437679.1| (PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 91/193 (47.15%), Postives = 134/193 (69.43%), Query Frame = 1

Query: 79  IKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVE 138
           ++A+T+FH+IDS+TTYK+LLG PWIH NG++TSTLH+CFKFY++ IKKV+A S PF+K E
Sbjct: 598 LQASTIFHVIDSKTTYKMLLGLPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAE 657

Query: 139 SHFADAKFYLKNDNINQV--TEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEAST 198
           SHFADAKFY K+++++++  TE+P+ K   K++ +  T  +    + + + ++ +    T
Sbjct: 658 SHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITSKKSNKGDALNSQHNGESTTET 717

Query: 199 NFAKPKTLK----NEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFVML 258
               P+  K     ++V++  VL Y+PLSRRKK ESPF ECSK L V + EILKE+F   
Sbjct: 718 KLRTPEAEKIATLRKEVSNPPVLRYIPLSRRKKGESPFAECSKNLTVKNTEILKENFTAP 777

Query: 259 LTSIAKQEVQEPR 266
           L  I K E ++ R
Sbjct: 778 LAKIEKGEAKKLR 790

BLAST of Cla001532 vs. NCBI nr
Match: gi|659102452|ref|XP_008452138.1| (PREDICTED: uncharacterized protein LOC103493236 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 3.1e-37
Identity = 100/299 (33.44%), Postives = 157/299 (52.51%), Query Frame = 1

Query: 79  IKANTLFHIIDSRTTYKLLLGHPWIHGNGVITSTLHKCFKFYQEDIKKVEAYSNPFSKVE 138
           ++A+T+ H+IDSRTTYK+LLG PWIH NG++TSTLH+CFKFY++ I+KV+A S PF+K E
Sbjct: 165 LQASTILHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCFKFYKQGIRKVDAESRPFTKAE 224

Query: 139 SHFADAKFYLKNDNINQV--TEIPLIKSEDKSQSKSQTDARKEPSEGMAAFYSQKDEAST 198
           SHFADAKFY K+++++++  TE+P+ K   K++ +  T  +    + + +  + +    T
Sbjct: 225 SHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITIKKSNKGDALNSPQNGESTTET 284

Query: 199 NFAKPKTLK----NEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDIEILKESFVML 258
               P+  K     ++V++  VLCY+PLSRRKK ESPF                E F  +
Sbjct: 285 KLRAPEAEKIATLQKEVSNPPVLCYIPLSRRKKGESPFA---------------EFFQRV 344

Query: 259 LTSIAKQEVQEPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTKFESLKIYEQP 318
            TSIAK   Q      T+++  +R   N   + +    +    +          K  ++ 
Sbjct: 345 STSIAKDSNQVSTCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKRLSVLVTKGQKKA 404

Query: 319 ELSLSQKSCYRRGMLYLLRAKGLGYKPPEPVCITRKGKEKVVDSNHITDEEVDDSKEKE 372
            +S+S KS    G   +  A     K    V +  +G  KV   + +     D+  E E
Sbjct: 405 SISVSNKSSLVTGDEEIHSAFPSRMKRKMFVAVNTEGSLKVKRHDVVFTRPEDNEPEDE 448

BLAST of Cla001532 vs. NCBI nr
Match: gi|659113191|ref|XP_008456446.1| (PREDICTED: uncharacterized protein LOC103496389 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33
Identity = 89/183 (48.63%), Postives = 113/183 (61.75%), Query Frame = 1

Query: 125 KKVEAYSNPFSKVESHFADAKFYLKNDNINQVT--EIPLIKSEDKSQSKSQTDARKEPSE 184
           + VEA  NPFS+ ESHF DAKFYLKND+  +V   E+P+                     
Sbjct: 138 RTVEANFNPFSEAESHFEDAKFYLKNDSSLEVVSVEVPI--------------------- 197

Query: 185 GMAAFYSQKDEASTNFAKPKTLKNEKVTSSLVLCYVPLSRRKKRESPFVECSKGLKVGDI 244
                     EAST+ AK   L +EK ++  +L YVPLSRRKK ESPFVE S+ LKVGDI
Sbjct: 198 ---------SEASTSTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESSQALKVGDI 257

Query: 245 EILKESFVMLLTSIAKQEVQEPRVDQTKVNLPERWTKNGFGLSAYKLLAKAGYNFMTHTK 304
           E+L+ESF   LT I KQE    + DQT+ +LP+R TK+GF   AYKL+AKAGY+F TH +
Sbjct: 258 EVLRESFTTPLTKITKQET---KTDQTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHIE 287

Query: 305 FES 306
           F++
Sbjct: 318 FKN 287

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A5C5C0_VITVI5.4e-2834.02Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007094 PE=4 SV=1[more]
A0A0K9RSA4_SPIOL7.8e-2729.58Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040670 PE=4 SV=1[more]
M1DNM7_SOLTU4.7e-2429.10Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400041468 PE=4 SV=1[more]
A5B9U3_VITVI3.2e-2056.41Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003694 PE=4 SV=1[more]
A0A0K9RJK8_SPIOL5.4e-2036.81Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778660504|ref|XP_011656345.1|9.2e-10661.11PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus][more]
gi|778697752|ref|XP_011654390.1|8.8e-4840.67PREDICTED: uncharacterized protein LOC105435379 [Cucumis sativus][more]
gi|659074577|ref|XP_008437679.1|1.3e-4347.15PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo][more]
gi|659102452|ref|XP_008452138.1|3.1e-3733.44PREDICTED: uncharacterized protein LOC103493236 [Cucumis melo][more]
gi|659113191|ref|XP_008456446.1|1.6e-3348.63PREDICTED: uncharacterized protein LOC103496389 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001532Cla001532.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001532CSPI01G19260Wild cucumber (PI 183967)cpiwmB090
The following gene(s) are paralogous to this gene:

None