Cla001439 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001439
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Phloem filament protein (AHRD V1 ***- P94012_CUCMA); contains Interpro domain(s) IPR009994 Phloem filament PP1
Location	Chr9 : 23252005 .. 23252613 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGCGAGCCATTTGGAAAGTGGATCCAAATCCCTGAAACATCAACACCTTGTGTGAAAGAAATTGCAAACCATGCAATGAATAAGCACAACGAACAAACTGGAGATCATCTGATATTCGTAAGAGTTATAGCAGGATGGTTTTTGGAGTTGGATGAGTACAGAATAAAGCATCGTTTGTATATTGAAGTAACAAACAGTAAAGGAGAAGTAGTTATATATGAAGCAGTGGTGGTGGTGGAAGAAAGAGATGGGAACAGAGTGAGGACTCTCATTTCTTTCGAACTAGTGATTGTGGATGAGAGGGATCCATTAATATTCTGGAAGAAGATTCCTGACGTTTATGCGGCTTCTGTGCAAGAAGTTGTAGAGTATGCTGTGAAAAAGAATAATGAGGATACTAATGATAATCTCAAGTACGTTTCAACAACTGAAGGTTGGTATTATGAGGTGAATCCAAATGCTATAAGGTACGATCTCCGTCTCAAGGCGAAGGATTGTTTGCATCGTGTGCGCGACTTTAAGGCTCTGGTACTCGAAGAGAATCCTCTTACTGAGAAAAAAAGGACACTCGAATCTTTCAAACTTATCCCAAGGAAATGGTGA

mRNA sequence

ATGAGTTGCGAGCCATTTGGAAAGTGGATCCAAATCCCTGAAACATCAACACCTTGTGTGAAAGAAATTGCAAACCATGCAATGAATAAGCACAACGAACAAACTGGAGATCATCTGATATTCGTAAGAGTTATAGCAGGATGGTTTTTGGAGTTGGATGAGTACAGAATAAAGCATCGTTTGTATATTGAAGTAACAAACAGTAAAGGAGAAGTAGTTATATATGAAGCAGTGGTGGTGGTGGAAGAAAGAGATGGGAACAGAGTGAGGACTCTCATTTCTTTCGAACTAGTGATTGTGGATGAGAGGGATCCATTAATATTCTGGAAGAAGATTCCTGACGTTTATGCGGCTTCTGTGCAAGAAGTTGTAGAGTATGCTGTGAAAAAGAATAATGAGGATACTAATGATAATCTCAAGTACGTTTCAACAACTGAAGGTTGGTATTATGAGGTGAATCCAAATGCTATAAGGTACGATCTCCGTCTCAAGGCGAAGGATTGTTTGCATCGTGTGCGCGACTTTAAGGCTCTGGTACTCGAAGAGAATCCTCTTACTGAGAAAAAAAGGACACTCGAATCTTTCAAACTTATCCCAAGGAAATGGTGA

Coding sequence (CDS)

ATGAGTTGCGAGCCATTTGGAAAGTGGATCCAAATCCCTGAAACATCAACACCTTGTGTGAAAGAAATTGCAAACCATGCAATGAATAAGCACAACGAACAAACTGGAGATCATCTGATATTCGTAAGAGTTATAGCAGGATGGTTTTTGGAGTTGGATGAGTACAGAATAAAGCATCGTTTGTATATTGAAGTAACAAACAGTAAAGGAGAAGTAGTTATATATGAAGCAGTGGTGGTGGTGGAAGAAAGAGATGGGAACAGAGTGAGGACTCTCATTTCTTTCGAACTAGTGATTGTGGATGAGAGGGATCCATTAATATTCTGGAAGAAGATTCCTGACGTTTATGCGGCTTCTGTGCAAGAAGTTGTAGAGTATGCTGTGAAAAAGAATAATGAGGATACTAATGATAATCTCAAGTACGTTTCAACAACTGAAGGTTGGTATTATGAGGTGAATCCAAATGCTATAAGGTACGATCTCCGTCTCAAGGCGAAGGATTGTTTGCATCGTGTGCGCGACTTTAAGGCTCTGGTACTCGAAGAGAATCCTCTTACTGAGAAAAAAAGGACACTCGAATCTTTCAAACTTATCCCAAGGAAATGGTGA

Protein sequence

MSCEPFGKWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTNSKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTEKKRTLESFKLIPRKW

Homology

[Close]

BLAST of Cla001439 vs. TrEMBL
Match: A0A0A0K3W6_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 111/202 (54.95%), Postives = 150/202 (74.26%), Query Frame = 1


Query: 1   MSCEPFGKWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHR 60
           MSC+    WI+IP+ +TPCV E+A   +N+HN+ +GD L++ RVI GWF E+D++ IKHR
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 61  LYIEVTNSKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASV 120
           L IEV  SKG V+IYE ++VV ++DG RVRTLISF    +DE++PLIFW KIPDV  + V
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 120

Query: 121 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 180
           Q+  ++AV ++N+ T+D L Y ST EGWY+EVNP  I + L +KAK+C+ RVRD+ A+V 
Sbjct: 121 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 180

Query: 181 EENPLTEKKRTLESFKLI-PRK 202
           EE PLTEK + LE F LI P+K
Sbjct: 181 EEKPLTEKIKKLEDFYLIRPKK 202

[Close]

BLAST of Cla001439 vs. TrEMBL
Match: A0A0A0LYF4_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-47
Identity = 102/202 (50.50%), Postives = 141/202 (69.80%), Query Frame = 1


Query: 1   MSCEPFGKWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHR 60
           MSC   G+W +IP  +TPCV +IAN A+ +HN++TG+ L    VI GWFLEL + ++K R
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 61  LYIEVTNSKGEVVIYEAVVVVEE-RDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAAS 120
           LYI   N KG V+ YEAVV V E  D  RV+ L+SF +  +DE+D  +FW  I D  A+ 
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120

Query: 121 VQEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNP-NAIRYDLRLKAKDCLHRVRDFKAL 180
           VQ+V ++AV K+NED +D+L Y+S T+GWY E++P NAI +++ L  KDC  RVR+FKAL
Sbjct: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180

Query: 181 VLEENPLTEKKRTLESFKLIPR 201
           VLE+ P  EK RTL+ F++I +
Sbjct: 181 VLEDKPQKEKIRTLKYFEVIKK 200

[Close]

BLAST of Cla001439 vs. TrEMBL
Match: P94012_CUCMA (Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28
Identity = 76/196 (38.78%), Postives = 120/196 (61.22%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWI+IP+ S  CV+E+A  A+ + N Q G  L +  +  GW+ EL +  +K+RL+I   +
Sbjct: 16  KWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNNLKYRLHIRAID 75

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVI-----VDERDP--LIFWKKIPDVYAASV 127
                ++YEA+V  E+    R+R LISF  ++     V   DP  +  W KIPD+    V
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLISFLYLLNGGHYVGPVDPPQVEKWIKIPDLRVPFV 135

Query: 128 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 187
           QEV ++A+ + N+   + LKYV   +GWY E+  + I++ L +KAKDCL R+R+++A+VL
Sbjct: 136 QEVSKFAIDEYNKG-GEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKDCLGRLRNYEAIVL 195

Query: 188 EENPLTEKKRTLESFK 197
            +  L++K + LESFK
Sbjct: 196 VKQFLSKKIKILESFK 210

[Close]

BLAST of Cla001439 vs. TrEMBL
Match: P94012_CUCMA (Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-23
Identity = 63/178 (35.39%), Postives = 105/178 (58.99%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWI+IP    P V+E+A  A+++HN+  GD L ++ V  GWF++L    IK RL+++  +
Sbjct: 319 KWIKIPNVQVPLVQELAKFAVDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKD 378

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIF---WKKIPDVYAASVQEVV 127
             G +  YEAVV+VE     R++ L SF+L       PL+F   W +IP++    +Q V+
Sbjct: 379 WLGRIRNYEAVVLVEHFWSKRIKILESFKLC-----GPLVFEPKWIQIPNLKELGLQVVI 438

Query: 128 EYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEE 183
           ++ V++      D+LK+    EGWY+ + PN+++Y   +K  D L R   F+ +++EE
Sbjct: 439 KFIVEQIKIKFGDSLKFEIVYEGWYFGLCPNSLKYRFHVKVIDFLGRPLKFEVVIIEE 490

HSP 2 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 63/178 (35.39%), Postives = 105/178 (58.99%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWI+IP    P V+E+A  A+++HN+  GD L ++ V  GWF++L    IK RL+++  +
Sbjct: 515 KWIKIPNVQVPLVQELAKFAVDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKD 574

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIF---WKKIPDVYAASVQEVV 127
             G +  YEAVV+VE     R++ L SF+        PL+F   W +IP++     Q V+
Sbjct: 575 WLGRIRNYEAVVLVEHFWSKRIKILESFKFC-----GPLVFEPKWIQIPNLKEPGFQVVI 634

Query: 128 EYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEE 183
            + V++      D LK+ S  EGWY+E+ P ++++ L +KA D L R  +++ +++EE
Sbjct: 635 NFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAIDFLGRCLNYEIIIIEE 686

HSP 3 Score: 112.5 bits (280), Expect = 6.2e-22
Identity = 59/191 (30.89%), Postives = 112/191 (58.64%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWI+IP+   P V+E++  A++++N+  G+ L +V +  GW+ E+ +  IK RL+++  +
Sbjct: 123 KWIKIPDLRVPFVQEVSKFAIDEYNKG-GEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKD 182

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYA 127
             G +  YEA+V+V++    +++ L SF+     +  P   W +IPDV    +Q V+++ 
Sbjct: 183 CLGRLRNYEAIVLVKQFLSKKIKILESFKFCDQGKVSP--GWNQIPDVKELGLQVVIKFI 242

Query: 128 VKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTE 187
           V++      D+LK+    EGWY+E+ PN+++Y   +K  D L R   F+ +++EE  +  
Sbjct: 243 VEQIKIKFGDSLKFEIVYEGWYFELCPNSLKYRFHVKVIDFLGRSLKFEIIIIEERRVLL 302

Query: 188 KKRTLESFKLI 199
           +   L+S  +I
Sbjct: 303 RIWKLDSIIVI 310

HSP 4 Score: 112.5 bits (280), Expect = 6.2e-22
Identity = 65/189 (34.39%), Postives = 109/189 (57.67%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWIQIP      ++ +    + +   + GD L F  V  GW+  L    +K+R +++V +
Sbjct: 416 KWIQIPNLKELGLQVVIKFIVEQIKIKFGDSLKFEIVYEGWYFGLCPNSLKYRFHVKVID 475

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYA 127
             G  + +E V++ E RD  R+  L S  + IV        W KIP+V    VQE+ ++A
Sbjct: 476 FLGRPLKFEVVIIEEIRDHLRIWKLDSI-IAIVSPEPQEKKWIKIPNVQVPLVQELAKFA 535

Query: 128 VKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTE 187
           V ++N++  D LKY+   EGW+ ++  + I++ L LKAKD L R+R+++A+VL E+  ++
Sbjct: 536 VDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKDWLGRIRNYEAVVLVEHFWSK 595

Query: 188 KKRTLESFK 197
           + + LESFK
Sbjct: 596 RIKILESFK 602

HSP 5 Score: 110.9 bits (276), Expect = 1.8e-21
Identity = 64/189 (33.86%), Postives = 110/189 (58.20%), Query Frame = 1


Query: 9   WIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTNS 68
           W QIP+     ++ +    + +   + GD L F  V  GW+ EL    +K+R +++V + 
Sbjct: 221 WNQIPDVKELGLQVVIKFIVEQIKIKFGDSLKFEIVYEGWYFELCPNSLKYRFHVKVIDF 280

Query: 69  KGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYAV 128
            G  + +E +++ E R   R+  L S  +VIV        W KIP+V    VQE+ ++AV
Sbjct: 281 LGRSLKFEIIIIEERRVLLRIWKLDSI-IVIVSPEPQEKKWIKIPNVQVPLVQELAKFAV 340

Query: 129 KKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTEK 188
            ++N++  D LKY+   EGW+ ++  + I++ L LKAKD L R+R+++A+VL E+  +++
Sbjct: 341 DEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKDWLGRIRNYEAVVLVEHFWSKR 400

Query: 189 KRTLESFKL 198
            + LESFKL
Sbjct: 401 IKILESFKL 407

HSP 6 Score: 107.5 bits (267), Expect = 2.0e-20
Identity = 66/201 (32.84%), Postives = 112/201 (55.72%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWIQIP    P  + + N  + +     GD L F  +  GW+ EL    +K RL+I+  +
Sbjct: 612 KWIQIPNLKEPGFQVVINFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAID 671

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVI-----VDERDP--LIFWKKIPDVYAASV 127
             G  + YE ++++EE+   R+  L S  +++     V   DP  +  W KI ++  A +
Sbjct: 672 FLGRCLNYE-IIIIEEK---RIFKLESIIVILSPGHCVGPVDPPKVEKWIKISNLQFAFL 731

Query: 128 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 187
           QEV ++A+   N  + D+L++    +GWY E+  + I++ + L+AKDCL RV  ++A V 
Sbjct: 732 QEVSKFALDDFNVKSGDSLRFDGIYDGWYMEMGQDNIKFRIHLRAKDCLSRVHHYEAYVY 791

Query: 188 EENPLTEKKRTLESFKLIPRK 202
            +  L+++ + +ESFKLI RK
Sbjct: 792 VKQFLSKRIKIVESFKLIERK 808

HSP 7 Score: 73.9 bits (180), Expect = 2.4e-10
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1


Query: 93  ISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEV 152
           +SF + +  +   +  W KIPDV    VQEV + AV++ N     +LKY S  EGWY E+
Sbjct: 1   MSFAVKVCGQVPAVEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCEL 60

Query: 153 NPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTEKKRTLESF 196
             N ++Y L ++A D L R   ++ALV EE P  E+ R L SF
Sbjct: 61  GQNNLKYRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKLISF 103

HSP 8 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 63/178 (35.39%), Postives = 105/178 (58.99%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWI+IP    P V+E+A  A+++HN+  GD L ++ V  GWF++L    IK RL+++  +
Sbjct: 126 KWIKIPNVQVPLVQELAKFAVDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKD 185

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIF---WKKIPDVYAASVQEVV 127
             G +  YEAVV+VE     R++ L SF+        PL+F   W +IP++     Q V+
Sbjct: 186 WLGRIRNYEAVVLVEHFWSKRIKILESFKFC-----GPLVFEPKWIQIPNLKEPGFQVVI 245

Query: 128 EYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEE 183
            + V++      D LK+ S  EGWY+E+ P ++++ L +KA D L R  +++ +++EE
Sbjct: 246 NFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAIDFLGRCLNYEIIIIEE 297

[Close]

BLAST of Cla001439 vs. TrEMBL
Match: Q7DMD5_CUCMA (Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.2e-22
Identity = 65/189 (34.39%), Postives = 109/189 (57.67%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWIQIP      ++ +    + +   + GD L F  V  GW+  L    +K+R +++V +
Sbjct: 27  KWIQIPNLKELGLQVVIKFIVEQIKIKFGDSLKFEIVYEGWYFGLCPNSLKYRFHVKVID 86

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYA 127
             G  + +E V++ E RD  R+  L S  + IV        W KIP+V    VQE+ ++A
Sbjct: 87  FLGRPLKFEVVIIEEIRDHLRIWKLDSI-IAIVSPEPQEKKWIKIPNVQVPLVQELAKFA 146

Query: 128 VKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTE 187
           V ++N++  D LKY+   EGW+ ++  + I++ L LKAKD L R+R+++A+VL E+  ++
Sbjct: 147 VDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKDWLGRIRNYEAVVLVEHFWSK 206

Query: 188 KKRTLESFK 197
           + + LESFK
Sbjct: 207 RIKILESFK 213

HSP 2 Score: 107.5 bits (267), Expect = 2.0e-20
Identity = 66/201 (32.84%), Postives = 112/201 (55.72%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWIQIP    P  + + N  + +     GD L F  +  GW+ EL    +K RL+I+  +
Sbjct: 223 KWIQIPNLKEPGFQVVINFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAID 282

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVI-----VDERDP--LIFWKKIPDVYAASV 127
             G  + YE ++++EE+   R+  L S  +++     V   DP  +  W KI ++  A +
Sbjct: 283 FLGRCLNYE-IIIIEEK---RIFKLESIIVILSPGHCVGPVDPPKVEKWIKISNLQFAFL 342

Query: 128 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 187
           QEV ++A+   N  + D+L++    +GWY E+  + I++ + L+AKDCL RV  ++A V 
Sbjct: 343 QEVSKFALDDFNVKSGDSLRFDGIYDGWYMEMGQDNIKFRIHLRAKDCLSRVHHYEAYVY 402

Query: 188 EENPLTEKKRTLESFKLIPRK 202
            +  L+++ + +ESFKLI RK
Sbjct: 403 VKQFLSKRIKIVESFKLIERK 419

HSP 3 Score: 58.9 bits (141), Expect = 8.1e-06
Identity = 33/106 (31.13%), Postives = 59/106 (55.66%), Query Frame = 1


Query: 80  VVEERDGNRVRTLISFELVIVDERDPLIF---WKKIPDVYAASVQEVVEYAVKKNNEDTN 139
           +VE     R++ L SF+L       PL+F   W +IP++    +Q V+++ V++      
Sbjct: 1   LVEHFWSKRIKILESFKLC-----GPLVFEPKWIQIPNLKELGLQVVIKFIVEQIKIKFG 60

Query: 140 DNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEE 183
           D+LK+    EGWY+ + PN+++Y   +K  D L R   F+ +++EE
Sbjct: 61  DSLKFEIVYEGWYFGLCPNSLKYRFHVKVIDFLGRPLKFEVVIIEE 101

HSP 4 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 50/95 (52.63%), Postives = 72/95 (75.79%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWIQIP+T TPCV ++  +A++ +N+   D+L+F +VI GW+LE+D  + K RL IEV N
Sbjct: 9   KWIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN 68

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDE 103
           SKGEV+IYE V+VV+++DG +V+T ISF    +DE
Sbjct: 69  SKGEVIIYEVVIVVDDKDGKKVKTPISFIPGYIDE 103

[Close]

BLAST of Cla001439 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 6.5e-57
Identity = 111/202 (54.95%), Postives = 150/202 (74.26%), Query Frame = 1


Query: 1   MSCEPFGKWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHR 60
           MSC+    WI+IP+ +TPCV E+A   +N+HN+ +GD L++ RVI GWF E+D++ IKHR
Sbjct: 226 MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 285

Query: 61  LYIEVTNSKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASV 120
           L IEV  SKG V+IYE ++VV ++DG RVRTLISF    +DE++PLIFW KIPDV  + V
Sbjct: 286 LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 345

Query: 121 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 180
           Q+  ++AV ++N+ T+D L Y ST EGWY+EVNP  I + L +KAK+C+ RVRD+ A+V 
Sbjct: 346 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 405

Query: 181 EENPLTEKKRTLESFKLI-PRK 202
           EE PLTEK + LE F LI P+K
Sbjct: 406 EEKPLTEKIKKLEDFYLIRPKK 427

[Close]

BLAST of Cla001439 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47
Identity = 96/194 (49.48%), Postives = 138/194 (71.13%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWIQIP+T TPCV ++  +A++ +N+   D+L+F +VI GW+LE+D  + K RL IEV N
Sbjct: 9   KWIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN 68

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASVQEVVEYA 127
           SKGEV+IYE V+VV+++DG +V+T ISF    +DE DP +FW +I D+    VQ++ ++A
Sbjct: 69  SKGEVIIYEVVIVVDDKDGKKVKTPISFIPGYIDEVDPWLFWFRIIDINDPHVQQIAKFA 128

Query: 128 VKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVLEENPLTE 187
           V+K+N+D ND+L Y+ST   WY  ++P   +Y + LKAKDCL RVRD++ALV EE  L  
Sbjct: 129 VEKHNQDNNDSLVYISTIVCWYRLLSPILKQYKVYLKAKDCLGRVRDYEALVEEEKKLPN 188

Query: 188 KKRTLESFKLIPRK 202
               L  FK+IP+K
Sbjct: 189 AILKLIYFKVIPKK 202

HSP 2 Score: 229.2 bits (583), Expect = 6.5e-57
Identity = 111/202 (54.95%), Postives = 150/202 (74.26%), Query Frame = 1


Query: 1   MSCEPFGKWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHR 60
           MSC+    WI+IP+ +TPCV E+A   +N+HN+ +GD L++ RVI GWF E+D++ IKHR
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 61  LYIEVTNSKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAASV 120
           L IEV  SKG V+IYE ++VV ++DG RVRTLISF    +DE++PLIFW KIPDV  + V
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 120

Query: 121 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 180
           Q+  ++AV ++N+ T+D L Y ST EGWY+EVNP  I + L +KAK+C+ RVRD+ A+V 
Sbjct: 121 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 180

Query: 181 EENPLTEKKRTLESFKLI-PRK 202
           EE PLTEK + LE F LI P+K
Sbjct: 181 EEKPLTEKIKKLEDFYLIRPKK 202

[Close]

BLAST of Cla001439 vs. NCBI nr
Match: gi|778664635|ref|XP_011660324.1| (PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 4.7e-47
Identity = 102/202 (50.50%), Postives = 141/202 (69.80%), Query Frame = 1


Query: 1   MSCEPFGKWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHR 60
           MSC   G+W +IP  +TPCV +IAN A+ +HN++TG+ L    VI GWFLEL + ++K R
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 61  LYIEVTNSKGEVVIYEAVVVVEE-RDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAAS 120
           LYI   N KG V+ YEAVV V E  D  RV+ L+SF +  +DE+D  +FW  I D  A+ 
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120

Query: 121 VQEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNP-NAIRYDLRLKAKDCLHRVRDFKAL 180
           VQ+V ++AV K+NED +D+L Y+S T+GWY E++P NAI +++ L  KDC  RVR+FKAL
Sbjct: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180

Query: 181 VLEENPLTEKKRTLESFKLIPR 201
           VLE+ P  EK RTL+ F++I +
Sbjct: 181 VLEDKPQKEKIRTLKYFEVIKK 200

[Close]

BLAST of Cla001439 vs. NCBI nr
Match: gi|659092737|ref|XP_008447193.1| (PREDICTED: uncharacterized protein LOC103489701 [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 97/202 (48.02%), Postives = 139/202 (68.81%), Query Frame = 1


Query: 1   MSCEPFGK-WIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKH 60
           MSCE   + WIQI +T+TPCV     HA++ HN++ GD+L+F +VI GW+LE+D  + K 
Sbjct: 1   MSCETKKEQWIQIHDTTTPCVINFGKHAVDDHNKEKGDNLVFKKVIIGWYLEIDYNKTKL 60

Query: 61  RLYIEVTNSKGEVVIYEAVVVVEERDGNRVRTLISFELVIVDERDPLIFWKKIPDVYAAS 120
           RL IEV NSKGEV+ +E V+VV+++DG  V+T+ISF    +DE++P  FW KI +V    
Sbjct: 61  RLIIEVVNSKGEVITFEVVIVVDDKDGKTVKTVISFVPGHIDEKNPWTFWIKIHNVTEPH 120

Query: 121 VQEVVEYAVKKNNEDTNDNLKYVSTTEGWYY-EVNPNAIRYDLRLKAKDCLHRVRDFKAL 180
           VQE+ ++AV+++N+ T+DNL Y+   EGWY+    P    + L LKAKDCL RVR+++AL
Sbjct: 121 VQEIAKFAVEEHNKITHDNLIYICIIEGWYHVSTIPPVTLWKLHLKAKDCLGRVREYEAL 180

Query: 181 VLEENPLTEKKRTLESFKLIPR 201
           V EE  L +    LE F +IP+
Sbjct: 181 VKEEKLLPKHVLKLEHFIVIPK 202

[Close]

BLAST of Cla001439 vs. NCBI nr
Match: gi|1753099|gb|AAC12676.1| (phloem filament protein [Cucurbita maxima])

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28
Identity = 76/196 (38.78%), Postives = 120/196 (61.22%), Query Frame = 1


Query: 8   KWIQIPETSTPCVKEIANHAMNKHNEQTGDHLIFVRVIAGWFLELDEYRIKHRLYIEVTN 67
           KWI+IP+ S  CV+E+A  A+ + N Q G  L +  +  GW+ EL +  +K+RL+I   +
Sbjct: 16  KWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNNLKYRLHIRAID 75

Query: 68  SKGEVVIYEAVVVVEERDGNRVRTLISFELVI-----VDERDP--LIFWKKIPDVYAASV 127
                ++YEA+V  E+    R+R LISF  ++     V   DP  +  W KIPD+    V
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLISFLYLLNGGHYVGPVDPPQVEKWIKIPDLRVPFV 135

Query: 128 QEVVEYAVKKNNEDTNDNLKYVSTTEGWYYEVNPNAIRYDLRLKAKDCLHRVRDFKALVL 187
           QEV ++A+ + N+   + LKYV   +GWY E+  + I++ L +KAKDCL R+R+++A+VL
Sbjct: 136 QEVSKFAIDEYNKG-GEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKDCLGRLRNYEAIVL 195

Query: 188 EENPLTEKKRTLESFK 197
            +  L++K + LESFK
Sbjct: 196 VKQFLSKKIKILESFK 210

The following BLAST results are available for this feature:

BLAST of Cla001439 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3W6_CUCSA	4.5e-57	54.95	Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1	[more]
A0A0A0LYF4_CUCSA	3.3e-47	50.50	Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1	[more]
P94012_CUCMA	2.6e-28	38.78	Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1	[more]
P94012_CUCMA	1.5e-23	35.39	Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1	[more]
Q7DMD5_CUCMA	6.2e-22	34.39	Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1	[more]

BLAST of Cla001439 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730266\|ref\|XP_011659743.1\|	6.5e-57	54.95	PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus]	[more]
gi\|778730266\|ref\|XP_011659743.1\|	2.1e-47	49.48	PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus]	[more]
gi\|778664635\|ref\|XP_011660324.1\|	4.7e-47	50.50	PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus]	[more]
gi\|659092737\|ref\|XP_008447193.1\|	1.2e-45	48.02	PREDICTED: uncharacterized protein LOC103489701 [Cucumis melo]	[more]
gi\|1753099\|gb\|AAC12676.1\|	3.7e-28	38.78	phloem filament protein [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009994	PP1
IPR020381	Proteinase inhibitor I25, cystatin, conserved region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU36229	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU48635	watermelon EST collection version 2.0	transcribed_cluster
WMU49683	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001439	Cla001439.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU36229	WMU36229	transcribed_cluster
WMU48635	WMU48635	transcribed_cluster
WMU49683	WMU49683	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009994	Phloem filament PP1	PFAM	PF07430	PP1	coord: 119..195 score: 9.3E-20coord: 18..95 score: 2.9
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PRODOM	PD001231		coord: 120..196 score: 6.
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 6..82 score: 7.1E-7coord: 109..189 score: 7.
None	No IPR available	unknown	SSF54403	Cystatin/monellin	coord: 5..84 score: 8.08E-12coord: 109..198 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001439	Cla97C09G176950	Watermelon (97103) v2	wmwmbB044
Cla001439	ClCG09G014700	Watermelon (Charleston Gray)	wcgwmB010
Cla001439	CmoCh11G015460	Cucurbita moschata (Rifu)	cmowmB074

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None