Cla001432 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001432
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Cysteine-rich protein with zinc finger (AHRD V1 ***- C1E120_MICSR)
Location	Chr9 : 23018594 .. 23020437 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTAGCTGCTATCGCGCAATTCGAGCGTGGTCTGGTGTTTGGAGAAGAACGAGTTGAAGAGGTCGAATTTAGGGCTGAAATTTTAAGGTCAGTAAGTTAACTTAATTCTTAACAACTTTTATGAAGGATGTTTGAGCTGAATTGGAAGAGAAATATGTAAACTTTTAGGTGGAAGTGACTGATACAGAATTGTTGTGGGATCTGGAGTAGCGCAAGGTAATCTTGAAATATCTAACTAACAAGGAGAAGTTAAGCCTCGAAAATTTAAGGTAAGCTAGAAAACATATTTCTCTGCAAGTTTGTAGAAGGAAAGAAGTTCTAAATTTGGCTGGAAATATGACTTTTAACATATAGAAGTGAGAACAAAAAGGAAATGAGGAAACTCTATTGTCGGGTGTCGGTAGGAAGCGGGTGTCGGTAGGAATTGAAGTGTAAGTAATGAGACGAGTGTCGCTGGGGCGTAGGGGGGTTTTTCGTCTCACAAATCTCGCTGAGTCTCGCTAGGTCTCGTTCTTCAGGTAAATCTCGCTAGTCTCGCTCATCTTGGTGTCGCTAGTGCAATGTCCTATTGTGTGTTTTCGCTAGTAATCTCGCTAGAAATGTGGAATCTCGCTAGTGACACAGAATCTCGCTTATTATGATTACTTTGGGAAAAAGGAGAGTCTCGGTGATGAAAAATGATTAGTGTTTAATTATGCACACTTAATGCCCATGGAAAGGAAGTTTAAGGAAAGCTTAACGTGAGAAATATGTATTTATAGGCCAAGAAGAGCTCGGAAAGGCATATAATTCGCTTAGGGCCTAGGACAAGTCGTGAGTGACTTTCTATCTAAAAGTGTTTAGTCTTAACATAGTTTCTTGATAATACTTGTTGATAAATGCTTACATGATCAAATTCTATGAACTTTATGTGTGTTCCATGTGCGCTATAATGAGTTGTTTCAATATATATTTATATATATAAACTGAGCTAAAGTATGTGAATAATAAGGGTAAGATGGATGAAAGCACGGGAACTATGATTAATATTGTGATATGGGAGTGGACACAAGAGTATGACTAAGTATGTGATATATGACGGTAAGACTAAAGAAAGCATATAAGCATATGAAATGTGATTTATGACGATGAGATTAAAAAAAGCATATGAGTTTATGAAAAGTATTGTGATGTATGAGACGTTACTGGAGTATGAACGAGAATACGAATTATAGCGTAAGAATAAAGAAAGCGTGTGGGCATATGAAAAGTGTTGTGATGTATGAGATATTACAAACTCATGATTTTATGTTATATTGTATTCTTATTTGAATGGCTCCCAATGCCGAGGGACAAAGAGAAGGCATGTGGGATATTTGTGTATGTAATTAGCTTCATGCTAATATTGTTCTAATTATCATGAAATGATTTATTAAGAACTACTCATGCAAAGCATATTTGCTTTATAATGTTTTTCTTTTAAGGGACCCAATGCTTAAGGAAGATGTGAAGGCATGTGGGAAACCCAGTGTTGTAAGAAACCCAATGCTGAGGAAAGATGTGAAGGCATGTGGGAAACCCAGTGTTGTAAGAAACCCAATGCGGAGAGAAGATGTGAAGGCATGTGCGAAACCCAGTGTTGTAAGAAACTCAATGTTGAGGAAAGATGTGAAGGCATGTGGGAAATCCAGTGATGTAAGAAACCCAATGCGGAGAGAAGATGTGAAGGCATGTGCGAAACCCAGTGTTGTAAGAAACTCAATGTTGAGGAAAGATGTGAAGGCATGTGGGAAATCCAGTGATGTAAGAAACCCCATGCTGAGAGACAATGTGAAGGCATTTGGGCAATCTTGTATTTGA

mRNA sequence

ATGAGTCTAGCTGCTATCGCGCAATTCGAGCGTGGTCTGGTGTTTGGAGAAGAACGAGTTGAAGAGGTCGAATTTAGGGCTGAAATTTTAAGGGACCCAATGCTTAAGGAAGATGTGAAGGCATGTGGGAAACCCAGTGTTGTAAGAAACCCAATGCTGAGGAAAGATGTGAAGGCATGTGGGAAACCCAGTGTTGTAAGAAACCCAATGCGGAGAGAAGATGTGAAGGCATGTGCGAAACCCAGTGTTGTAAGAAACTCAATGTTGAGGAAAGATGTGAAGGCATGTGGGAAATCCAGTGATGTAAGAAACCCAATGCGGAGAGAAGATGTGAAGGCATGTGCGAAACCCAGTGTTGTAAGAAACTCAATGTTGAGGAAAGATGTGAAGGCATGTGGGAAATCCAGTGATGTAAGAAACCCCATGCTGAGAGACAATGTGAAGGCATTTGGGCAATCTTGTATTTGA

Coding sequence (CDS)

ATGAGTCTAGCTGCTATCGCGCAATTCGAGCGTGGTCTGGTGTTTGGAGAAGAACGAGTTGAAGAGGTCGAATTTAGGGCTGAAATTTTAAGGGACCCAATGCTTAAGGAAGATGTGAAGGCATGTGGGAAACCCAGTGTTGTAAGAAACCCAATGCTGAGGAAAGATGTGAAGGCATGTGGGAAACCCAGTGTTGTAAGAAACCCAATGCGGAGAGAAGATGTGAAGGCATGTGCGAAACCCAGTGTTGTAAGAAACTCAATGTTGAGGAAAGATGTGAAGGCATGTGGGAAATCCAGTGATGTAAGAAACCCAATGCGGAGAGAAGATGTGAAGGCATGTGCGAAACCCAGTGTTGTAAGAAACTCAATGTTGAGGAAAGATGTGAAGGCATGTGGGAAATCCAGTGATGTAAGAAACCCCATGCTGAGAGACAATGTGAAGGCATTTGGGCAATCTTGTATTTGA

Protein sequence

MSLAAIAQFERGLVFGEERVEEVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSCI

Homology

[Close]

BLAST of Cla001432 vs. TrEMBL
Match: L1JRR2_GUITH (Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_134654 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-11
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +  +R   KACG  S+  +  RR + KAC   S+  +  +R + KACG  
Sbjct: 55  KACGGGSICEHGRIRSHCKACGGGSICEHGRRRSECKACGGGSICEHGRIRSECKACGGG 114

Query: 100 SDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSCI 156
           S   +  RR   KAC   S+  +  +R   KACG  S   +  +R + KA G   I
Sbjct: 115 SICEHGRRRSHCKACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCKACGGGSI 170

[Close]

BLAST of Cla001432 vs. TrEMBL
Match: L1JRR2_GUITH (Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_134654 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 1


Query: 36  KEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKA 95
           + + KACG  S+  +  +R + KACG  S+  +  RR   KAC   S+  +  +R   KA
Sbjct: 87  RSECKACGGGSICEHGRIRSECKACGGGSICEHGRRRSHCKACGGGSICEHGRIRSHCKA 146

Query: 96  CGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSCI 155
           CG  S   +   R   KAC   S+  +   R + KACG  S   +  +R   KA G   I
Sbjct: 147 CGGGSICEHGRIRSHCKACGGGSICEHWRRRSECKACGGGSICEHGRIRSECKACGGGSI 206

HSP 2 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 39/121 (32.23%), Postives = 57/121 (47.11%), Query Frame = 1


Query: 35  LKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVK 94
           ++ + KACG  S+  +   R   KACG  S+  +   R   KAC   S+  +  +R   K
Sbjct: 104 IRSECKACGGGSICEHGRRRSHCKACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCK 163

Query: 95  ACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSC 154
           ACG  S   +  RR + KAC   S+  +  +R + KACG  S   +   R + KA G   
Sbjct: 164 ACGGGSICEHWRRRSECKACGGGSICEHGRIRSECKACGGGSICEHGRRRSHCKACGGGS 223

Query: 155 I 156
           I
Sbjct: 224 I 224

HSP 3 Score: 65.1 bits (157), Expect = 8.7e-08
Identity = 38/121 (31.40%), Postives = 53/121 (43.80%), Query Frame = 1


Query: 35  LKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVK 94
           ++   KACG  S+  +   R + KACG  S+  +   R + KAC   S+  +   R   K
Sbjct: 68  IRSHCKACGGGSICEHGRRRSECKACGGGSICEHGRIRSECKACGGGSICEHGRRRSHCK 127

Query: 95  ACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSC 154
           ACG  S   +   R   KAC   S+  +  +R   KACG  S   +   R   KA G   
Sbjct: 128 ACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCKACGGGSICEHWRRRSECKACGGGS 187

Query: 155 I 156
           I
Sbjct: 188 I 188

HSP 4 Score: 62.4 bits (150), Expect = 5.6e-07
Identity = 36/110 (32.73%), Postives = 50/110 (45.45%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +  +R   KACG  S+  +   R   KAC   S+  +   R + KACG  
Sbjct: 127 KACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCKACGGGSICEHWRRRSECKACGGG 186

Query: 100 SDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKA 150
           S   +   R + KAC   S+  +   R   KACG  S   +   R + KA
Sbjct: 187 SICEHGRIRSECKACGGGSICEHGRRRSHCKACGGGSICEHGRRRSHCKA 236

HSP 5 Score: 66.2 bits (160), Expect = 3.9e-08
Identity = 37/112 (33.04%), Postives = 52/112 (46.43%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +  +R   KACG  S+  +   R   KAC   S+  +  +R   KACG S
Sbjct: 15  KACGGSSICEHGRVRSRCKACGGGSICEHGRVRSVCKACGGSSICEHGRVRSRCKACGGS 74

Query: 100 SDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFG 152
           S   +  +R   KAC   S+  +  +R   KACG  S   +  +R   K  G
Sbjct: 75  SICEHGRQRSGCKACGGSSICEHGRVRSGCKACGGGSICEHGRVRSGCKECG 126

[Close]

BLAST of Cla001432 vs. TrEMBL
Match: L1JD77_GUITH (Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_157796 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.7e-08
Identity = 40/123 (32.52%), Postives = 54/123 (43.90%), Query Frame = 1


Query: 36  KEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVV---RNSMLRKD 95
           +   KACG  S+  +   R   KACG  S+  +  +R   KAC   S+    R+   R  
Sbjct: 33  RSSCKACGGGSICEHGRRRSQCKACGGSSICEHGRQRSQCKACGGGSICEHGRHGRERSR 92

Query: 96  VKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQ 155
            KACG SS   +  +R   KAC   S+  +  +R   KACG  S   +   R   KA G 
Sbjct: 93  CKACGGSSICEHGRQRSQCKACGGSSICEHGRVRSSCKACGGGSICEHRRQRSRCKACGG 152

[Close]

BLAST of Cla001432 vs. TrEMBL
Match: L1JD77_GUITH (Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_157796 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-02
Identity = 25/75 (33.33%), Postives = 33/75 (44.00%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +   R   KACG  S+  +   R   KAC   S+  +   R   KACG  
Sbjct: 94  KACGGSSICEHGRQRSQCKACGGSSICEHGRVRSSCKACGGGSICEHRRQRSRCKACGGG 153

Query: 100 SDVRNPMRREDVKAC 115
           S   +  +R   K C
Sbjct: 154 SICEHGRQRSQCKVC 168

HSP 2 Score: 47.0 bits (110), Expect = 2.5e-02
Identity = 31/87 (35.63%), Postives = 37/87 (42.53%), Query Frame = 1


Query: 72  REDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKA 131
           R   KACA  S+  +   R   KACG  S   +  RR   KAC   S+  +   R   KA
Sbjct: 15  RSRCKACAGGSICEHGRQRSSCKACGGGSICEHGRRRSQCKACGGSSICEHGRQRSQCKA 74

Query: 132 CGKSS---DVRNPMLRDNVKAFGQSCI 156
           CG  S     R+   R   KA G S I
Sbjct: 75  CGGGSICEHGRHGRERSRCKACGGSSI 101

HSP 3 Score: 31.2 bits (69), Expect = 1.4e+03
Identity = 14/44 (31.82%), Postives = 21/44 (47.73%), Query Frame = 1


Query: 35  LKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKAC 79
           ++   KACG  S+  +   R   KACG  S+  +  +R   K C
Sbjct: 125 VRSSCKACGGGSICEHRRQRSRCKACGGGSICEHGRQRSQCKVC 168

HSP 4 Score: 60.5 bits (145), Expect = 2.1e-06
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++D    E VKA  KP  V++    + VKA  KP  V++  + E VKA +KP
Sbjct: 1082 KAESKPEPVKDESKPEPVKAESKPEPVKDEPKPEPVKAESKPEPVKDESKPEPVKAESKP 1141

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              VR+    + VKA  K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1142 EPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAE 1201

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1202 SKPEPVKA 1209

[Close]

BLAST of Cla001432 vs. TrEMBL
Match: D8TXC8_VOLCA (Putative uncharacterized protein OS=Volvox carteri f. nagariensis GN=VOLCADRAFT_104948 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-06
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++D    E VKA  KP  V++    + VKA  KP  VR+  + E VKA +KP
Sbjct: 1100 KAESKPEPVKDEPKPEPVKAESKPEPVKDESKPEPVKAESKPEPVRDESKPEPVKAESKP 1159

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   V+   + E VKA +KP  V+     + VKA  K   VR+ 
Sbjct: 1160 EPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVRDE 1219

Query: 142  MLRDNVK 149
               + VK
Sbjct: 1220 SKPEPVK 1226

HSP 2 Score: 58.5 bits (140), Expect = 8.1e-06
Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++D    E VKA  KP  VR+    + VKA  KP  V+   + E VKA +KP
Sbjct: 1118 KAESKPEPVKDESKPEPVKAESKPEPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKP 1177

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   V+   + E VKA +KP  VR+    + VK   K   V+  
Sbjct: 1178 EPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVRDESKPEPVKVEPKPEPVKAE 1237

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1238 SKPEPVKA 1245

HSP 3 Score: 56.6 bits (135), Expect = 3.1e-05
Identity = 44/128 (34.38%), Postives = 60/128 (46.88%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E +RD    E VKA  KP  V+     + VKA  KP  V+   + E VKA +KP
Sbjct: 1136 KAESKPEPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKP 1195

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   VR+  + E VK   KP  V+     + VKA  K   V+  
Sbjct: 1196 EPVKAESKPEPVKAESKPEPVRDESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKVE 1255

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1256 PKPEPVKA 1263

HSP 4 Score: 52.4 bits (124), Expect = 5.8e-04
Identity = 42/128 (32.81%), Postives = 60/128 (46.88%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++     E VKA  KP  V+     + VKA  KP  V+   + E VKA +KP
Sbjct: 1154 KAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKP 1213

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              VR+    + VK   K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1214 EPVRDESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAE 1273

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1274 SKPEPVKA 1281

HSP 5 Score: 51.6 bits (122), Expect = 9.9e-04
Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++     E VKA  KP  V+     + VKA  KP  VR+  + E VK   KP
Sbjct: 1172 KAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVRDESKPEPVKVEPKP 1231

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1232 EPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVE 1291

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1292 PKPEPVKA 1299

HSP 6 Score: 51.6 bits (122), Expect = 9.9e-04
Identity = 43/128 (33.59%), Postives = 61/128 (47.66%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E +RD    E VK   KP  V+     + VKA  KP  V+   + E VKA +KP
Sbjct: 1208 KAESKPEPVRDESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKP 1267

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVR-N 141
              V+     + VKA  K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1268 EPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAELKPEPVKAE 1327

Query: 142  PMLRDNVK 149
            P+  + VK
Sbjct: 1328 PVKAEPVK 1335

[Close]

BLAST of Cla001432 vs. NCBI nr
Match: gi|551670729|ref|XP_005838122.1| (hypothetical protein GUITHDRAFT_134654 [Guillardia theta CCMP2712])

HSP 1 Score: 76.3 bits (186), Expect = 5.4e-11
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +  +R   KACG  S+  +  RR + KAC   S+  +  +R + KACG  
Sbjct: 55  KACGGGSICEHGRIRSHCKACGGGSICEHGRRRSECKACGGGSICEHGRIRSECKACGGG 114

Query: 100 SDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSCI 156
           S   +  RR   KAC   S+  +  +R   KACG  S   +  +R + KA G   I
Sbjct: 115 SICEHGRRRSHCKACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCKACGGGSI 170

[Close]

BLAST of Cla001432 vs. NCBI nr
Match: gi|551670729|ref|XP_005838122.1| (hypothetical protein GUITHDRAFT_134654 [Guillardia theta CCMP2712])

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 1


Query: 36  KEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKA 95
           + + KACG  S+  +  +R + KACG  S+  +  RR   KAC   S+  +  +R   KA
Sbjct: 87  RSECKACGGGSICEHGRIRSECKACGGGSICEHGRRRSHCKACGGGSICEHGRIRSHCKA 146

Query: 96  CGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSCI 155
           CG  S   +   R   KAC   S+  +   R + KACG  S   +  +R   KA G   I
Sbjct: 147 CGGGSICEHGRIRSHCKACGGGSICEHWRRRSECKACGGGSICEHGRIRSECKACGGGSI 206

HSP 2 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 39/121 (32.23%), Postives = 57/121 (47.11%), Query Frame = 1


Query: 35  LKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVK 94
           ++ + KACG  S+  +   R   KACG  S+  +   R   KAC   S+  +  +R   K
Sbjct: 104 IRSECKACGGGSICEHGRRRSHCKACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCK 163

Query: 95  ACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSC 154
           ACG  S   +  RR + KAC   S+  +  +R + KACG  S   +   R + KA G   
Sbjct: 164 ACGGGSICEHWRRRSECKACGGGSICEHGRIRSECKACGGGSICEHGRRRSHCKACGGGS 223

Query: 155 I 156
           I
Sbjct: 224 I 224

HSP 3 Score: 65.1 bits (157), Expect = 1.2e-07
Identity = 38/121 (31.40%), Postives = 53/121 (43.80%), Query Frame = 1


Query: 35  LKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVK 94
           ++   KACG  S+  +   R + KACG  S+  +   R + KAC   S+  +   R   K
Sbjct: 68  IRSHCKACGGGSICEHGRRRSECKACGGGSICEHGRIRSECKACGGGSICEHGRRRSHCK 127

Query: 95  ACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQSC 154
           ACG  S   +   R   KAC   S+  +  +R   KACG  S   +   R   KA G   
Sbjct: 128 ACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCKACGGGSICEHWRRRSECKACGGGS 187

Query: 155 I 156
           I
Sbjct: 188 I 188

HSP 4 Score: 62.4 bits (150), Expect = 8.1e-07
Identity = 36/110 (32.73%), Postives = 50/110 (45.45%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +  +R   KACG  S+  +   R   KAC   S+  +   R + KACG  
Sbjct: 127 KACGGGSICEHGRIRSHCKACGGGSICEHGRIRSHCKACGGGSICEHWRRRSECKACGGG 186

Query: 100 SDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKA 150
           S   +   R + KAC   S+  +   R   KACG  S   +   R + KA
Sbjct: 187 SICEHGRIRSECKACGGGSICEHGRRRSHCKACGGGSICEHGRRRSHCKA 236

HSP 5 Score: 66.2 bits (160), Expect = 5.6e-08
Identity = 37/112 (33.04%), Postives = 52/112 (46.43%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +  +R   KACG  S+  +   R   KAC   S+  +  +R   KACG S
Sbjct: 15  KACGGSSICEHGRVRSRCKACGGGSICEHGRVRSVCKACGGSSICEHGRVRSRCKACGGS 74

Query: 100 SDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFG 152
           S   +  +R   KAC   S+  +  +R   KACG  S   +  +R   K  G
Sbjct: 75  SICEHGRQRSGCKACGGSSICEHGRVRSGCKACGGGSICEHGRVRSGCKECG 126

[Close]

BLAST of Cla001432 vs. NCBI nr
Match: gi|551660545|ref|XP_005833040.1| (hypothetical protein GUITHDRAFT_157796 [Guillardia theta CCMP2712])

HSP 1 Score: 65.5 bits (158), Expect = 9.6e-08
Identity = 40/123 (32.52%), Postives = 54/123 (43.90%), Query Frame = 1


Query: 36  KEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVV---RNSMLRKD 95
           +   KACG  S+  +   R   KACG  S+  +  +R   KAC   S+    R+   R  
Sbjct: 33  RSSCKACGGGSICEHGRRRSQCKACGGSSICEHGRQRSQCKACGGGSICEHGRHGRERSR 92

Query: 96  VKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMLRDNVKAFGQ 155
            KACG SS   +  +R   KAC   S+  +  +R   KACG  S   +   R   KA G 
Sbjct: 93  CKACGGSSICEHGRQRSQCKACGGSSICEHGRVRSSCKACGGGSICEHRRQRSRCKACGG 152

[Close]

BLAST of Cla001432 vs. NCBI nr
Match: gi|551660545|ref|XP_005833040.1| (hypothetical protein GUITHDRAFT_157796 [Guillardia theta CCMP2712])

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-02
Identity = 25/75 (33.33%), Postives = 33/75 (44.00%), Query Frame = 1


Query: 40  KACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKS 99
           KACG  S+  +   R   KACG  S+  +   R   KAC   S+  +   R   KACG  
Sbjct: 94  KACGGSSICEHGRQRSQCKACGGSSICEHGRVRSSCKACGGGSICEHRRQRSRCKACGGG 153

Query: 100 SDVRNPMRREDVKAC 115
           S   +  +R   K C
Sbjct: 154 SICEHGRQRSQCKVC 168

HSP 2 Score: 47.0 bits (110), Expect = 3.5e-02
Identity = 31/87 (35.63%), Postives = 37/87 (42.53%), Query Frame = 1


Query: 72  REDVKACAKPSVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKA 131
           R   KACA  S+  +   R   KACG  S   +  RR   KAC   S+  +   R   KA
Sbjct: 15  RSRCKACAGGSICEHGRQRSSCKACGGGSICEHGRRRSQCKACGGSSICEHGRQRSQCKA 74

Query: 132 CGKSS---DVRNPMLRDNVKAFGQSCI 156
           CG  S     R+   R   KA G S I
Sbjct: 75  CGGGSICEHGRHGRERSRCKACGGSSI 101

HSP 3 Score: 31.2 bits (69), Expect = 2.0e+03
Identity = 14/44 (31.82%), Postives = 21/44 (47.73%), Query Frame = 1


Query: 35  LKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKAC 79
           ++   KACG  S+  +   R   KACG  S+  +  +R   K C
Sbjct: 125 VRSSCKACGGGSICEHRRQRSRCKACGGGSICEHGRQRSQCKVC 168

HSP 4 Score: 60.5 bits (145), Expect = 3.1e-06
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++D    E VKA  KP  V++    + VKA  KP  V++  + E VKA +KP
Sbjct: 1082 KAESKPEPVKDESKPEPVKAESKPEPVKDEPKPEPVKAESKPEPVKDESKPEPVKAESKP 1141

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              VR+    + VKA  K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1142 EPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAE 1201

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1202 SKPEPVKA 1209

[Close]

BLAST of Cla001432 vs. NCBI nr
Match: gi|302839067|ref|XP_002951091.1| (hypothetical protein VOLCADRAFT_104948 [Volvox carteri f. nagariensis])

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-06
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++D    E VKA  KP  V++    + VKA  KP  VR+  + E VKA +KP
Sbjct: 1100 KAESKPEPVKDEPKPEPVKAESKPEPVKDESKPEPVKAESKPEPVRDESKPEPVKAESKP 1159

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   V+   + E VKA +KP  V+     + VKA  K   VR+ 
Sbjct: 1160 EPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVRDE 1219

Query: 142  MLRDNVK 149
               + VK
Sbjct: 1220 SKPEPVK 1226

HSP 2 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++D    E VKA  KP  VR+    + VKA  KP  V+   + E VKA +KP
Sbjct: 1118 KAESKPEPVKDESKPEPVKAESKPEPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKP 1177

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   V+   + E VKA +KP  VR+    + VK   K   V+  
Sbjct: 1178 EPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVRDESKPEPVKVEPKPEPVKAE 1237

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1238 SKPEPVKA 1245

HSP 3 Score: 56.6 bits (135), Expect = 4.4e-05
Identity = 44/128 (34.38%), Postives = 60/128 (46.88%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E +RD    E VKA  KP  V+     + VKA  KP  V+   + E VKA +KP
Sbjct: 1136 KAESKPEPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKP 1195

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   VR+  + E VK   KP  V+     + VKA  K   V+  
Sbjct: 1196 EPVKAESKPEPVKAESKPEPVRDESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKVE 1255

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1256 PKPEPVKA 1263

HSP 4 Score: 52.4 bits (124), Expect = 8.4e-04
Identity = 42/128 (32.81%), Postives = 60/128 (46.88%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++     E VKA  KP  V+     + VKA  KP  V+   + E VKA +KP
Sbjct: 1154 KAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKP 1213

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              VR+    + VK   K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1214 EPVRDESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAE 1273

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1274 SKPEPVKA 1281

HSP 5 Score: 51.6 bits (122), Expect = 1.4e-03
Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E ++     E VKA  KP  V+     + VKA  KP  VR+  + E VK   KP
Sbjct: 1172 KAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVRDESKPEPVKVEPKP 1231

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVRNP 141
              V+     + VKA  K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1232 EPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVE 1291

Query: 142  MLRDNVKA 150
               + VKA
Sbjct: 1292 PKPEPVKA 1299

HSP 6 Score: 51.6 bits (122), Expect = 1.4e-03
Identity = 43/128 (33.59%), Postives = 61/128 (47.66%), Query Frame = 1


Query: 22   EVEFRAEILRDPMLKEDVKACGKPSVVRNPMLRKDVKACGKPSVVRNPMRREDVKACAKP 81
            + E + E +RD    E VK   KP  V+     + VKA  KP  V+   + E VKA +KP
Sbjct: 1208 KAESKPEPVRDESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKP 1267

Query: 82   SVVRNSMLRKDVKACGKSSDVRNPMRREDVKACAKPSVVRNSMLRKDVKACGKSSDVR-N 141
              V+     + VKA  K   V+   + E VKA +KP  V+     + VKA  K   V+  
Sbjct: 1268 EPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVKAELKPEPVKAE 1327

Query: 142  PMLRDNVK 149
            P+  + VK
Sbjct: 1328 PVKAEPVK 1335

The following BLAST results are available for this feature:

BLAST of Cla001432 vs. TrEMBL


Match Name	E-value	Identity	Description
L1JRR2_GUITH	3.8e-11	34.48	Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_134654 PE=4 S...	[more]
L1JRR2_GUITH	1.2e-09	32.50	Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_134654 PE=4 S...	[more]
L1JD77_GUITH	6.7e-08	32.52	Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_157796 PE=4 S...	[more]
L1JD77_GUITH	1.9e-02	33.33	Uncharacterized protein OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_157796 PE=4 S...	[more]
D8TXC8_VOLCA	2.8e-06	34.65	Putative uncharacterized protein OS=Volvox carteri f. nagariensis GN=VOLCADRAFT_...	[more]

BLAST of Cla001432 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|551670729\|ref\|XP_005838122.1\|	5.4e-11	34.48	hypothetical protein GUITHDRAFT_134654 [Guillardia theta CCMP2712]	[more]
gi\|551670729\|ref\|XP_005838122.1\|	1.7e-09	32.50	hypothetical protein GUITHDRAFT_134654 [Guillardia theta CCMP2712]	[more]
gi\|551660545\|ref\|XP_005833040.1\|	9.6e-08	32.52	hypothetical protein GUITHDRAFT_157796 [Guillardia theta CCMP2712]	[more]
gi\|551660545\|ref\|XP_005833040.1\|	2.7e-02	33.33	hypothetical protein GUITHDRAFT_157796 [Guillardia theta CCMP2712]	[more]
gi\|302839067\|ref\|XP_002951091.1\|	4.0e-06	34.65	hypothetical protein VOLCADRAFT_104948 [Volvox carteri f. nagariensis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001432	Cla001432.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001432	Watermelon (97103) v2	wmwmbB044
Cla001432	Watermelon (Charleston Gray)	wcgwmB010