Cla001393 (gene) Watermelon (97103) v1

NameCla001393
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 18237261 .. 18239193 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAGGTTTTGGTTCGTGACTGTTTCATGGAATTTGTGGGAGTTCATTCGAGAGAATTTGAAATAGAAGATAGTCTTCAAAGGTTAACTCTTTCTTCCTTAAATCTGCTTAAGCATGCTATAATTTTATGTTTATCTTGTATATTATTCTATATTTTTCTCTATTGTTGAGGTTTCCAAAATGAATTACATTGGCACGTGCATTCACACGCTTCCGCTATGGAATTCCGTTCCATCAGTGAGAACTTGGGATGAGTAGTTGACGATGTTGTATATATTGTGAGTGTGACATCCAACTTTTAACAACCGATTCGTTGAAAAGTCTGAAGGAAAGGAATAAAAGACCATGTTGGACGCATGGTCAAGACTAAGGTAATGCATGGTAAAAAGGTGGACGTATAGGAAGTACTCGAGAACTTGAAGGGAAAGAAGTGAAACGCATAGGAGGTAATTCTGAAGAGATTGAAAGCATTGGCGATGGTAAGACGCATAGACTTCTATCGTAGGATATTTTCAAGTGTTGGAAAGTAGAAGGTTGTGAAGTAAACATAAAAACTGGAGCATGTGGTGGACGCATGTTAATCTATCTTAAGAGAAATAGTTTAAGTGCAAGGAAAAGGTTAAAAGAATAACCTTGAGAATAATCAAGGAATGTCCAAGGATAGGAAGATGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTATGGACATAAGGAAGGAGTTGGACGCATGGTATGATGCGATGAGGTACAAACGCATAGTATTGCGCGTTTGTCATTGACGCCTAGTGGCATTGTGTAAGCACTGGTTTATAATAGTGCGACTATGCGTTGAAGGTGATCACGAATGGTTGTTGTGAGCTGAAGTAGTCGCCGCGTTGGCGGGGGAAGAAACATATTTGGCTTACCATGCATTGGTAAGGTTGTCATGCGTTGTGGTCCCTAACGTTGAAGACAAAGTTGTCTCTATGCGTCGAAGACAGTAGTGTAGTTGGTCATGGTATACGTTGAAGATAGAAGGCGTTGAGAGCGCCATGCGTTGAGTGTGGTTGATTGCTGAAGGCGTTTGGGTAGGTGGTGTTATGGGTGCCTTGCGTTGAAGTAAGAATGAGAACCCAGCGCGCCAGCCTGCCTTTGAGGGTTAAGTCGGTGGTATATATAAAGGTAAACGAATTAAATATTTAATCATTCTAGACACTTCAAGAACTTAAGTCGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTGGAACAGAAAGTTGGTGGTGGACACACAGACTGGACGACGTCTGATGTTTGGAGTAGAGTGAATCGAGGAGATCGAATCTAGGGCTGAAATTTTAAGGTCAGTAAGTTAACAAAATTCTTAACAATTCTTGTGAAGGATGGAAAAGCTGAAATTGAAGTCAAATATGTGAAATTTTAGATAAAAGCAACGGCTTCTGAATTGCTGTGCAGTCTGGAGTAATGCAGGGTAATTTTGGGATAGCTGGAGAACGAAGGAGAGTTAAGTCTTGAAATTTTGAGGTAACCTGTGAAACTCAATTCTTTACAAGTTTGTAGAAGGGAAGAAGTTCTAAATCTATCTGAATGTATGACTTTTAATAGTTAGGAGTAAGAACAAAAAGGAAAAGAAGAGATCTCAGTTGTCAGGTGCCGCTAAGAAGCGGGTATCGCTGAGTAGACAAGGTGAAGGTAGCGAGACGAGTGTTGCTGAGACGCAAGAGAGCTTTCTATCTCACAAAACTCGCTGGGTATCGCTTCTCAGGTAA

mRNA sequence

ATGGTGGAGGTTTTGGTTCGTGACTGTTTCATGGAATTTGTGGGAGTTCATTCGAGAGAATTTGAAATAGAAGATAGTCTTCAAAGGAGTAAGAACAAAAAGGAAAAGAAGAGATCTCAGTTGTCAGGTGCCGCTAAGAAGCGGGTATCGCTGAGTAGACAAGGTGAAGGTAGCGAGACGAGTGTTGCTGAGACGCAAGAGAGCTTTCTATCTCACAAAACTCGCTGGGTATCGCTTCTCAGGTAA

Coding sequence (CDS)

ATGGTGGAGGTTTTGGTTCGTGACTGTTTCATGGAATTTGTGGGAGTTCATTCGAGAGAATTTGAAATAGAAGATAGTCTTCAAAGGAGTAAGAACAAAAAGGAAAAGAAGAGATCTCAGTTGTCAGGTGCCGCTAAGAAGCGGGTATCGCTGAGTAGACAAGGTGAAGGTAGCGAGACGAGTGTTGCTGAGACGCAAGAGAGCTTTCTATCTCACAAAACTCGCTGGGTATCGCTTCTCAGGTAA

Protein sequence

MVEVLVRDCFMEFVGVHSREFEIEDSLQRSKNKKEKKRSQLSGAAKKRVSLSRQGEGSETSVAETQESFLSHKTRWVSLLR
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001393Cla001393.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 27..47
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None