Cla001246 (gene) Watermelon (97103) v1

Overview
NameCla001246
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPathogenesis-related protein 1 (AHRD V1 ***- E2GEV2_9ROSI); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
LocationChr2 : 7585522 .. 7586004 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTGCTCAAGCTTCTCTCCTTCATAACCCTGATGGGGCTGATAACCCTAGCCCCCATCACCCTGGCTCAAAACTCCCACCAAGACTTCGTCAACGCCCACAACGCTGCCCGAGCTAGGGTCGGTGTCGGGCCCGTCTCTTGGAACTACACCTTGGCAACCTATGCCCAAACTTATGCCAACAAGAAGATTGGCAGTTGTGAGATGAAACATTCGTATGGTCCTTATGGCGAGAATTTAGCCGAAGGGTACGGCGAGATGACGGCAATAGAGGCAGTGAATTTTTGGGTGAGCGAAAAGAAATACTATGACCATAGATCCAACCGGTGCGTCGGGGATGAGTGTCGCCATTACACACAAGTGGTGTGGCGGGACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGTCACAACAATTGGATCTTTGTGATATGCAATTATGATCCTCCTGGCAATTATGTAGGCCAGCTTCCTTACTAA

mRNA sequence

ATGCCATTGCTCAAGCTTCTCTCCTTCATAACCCTGATGGGGCTGATAACCCTAGCCCCCATCACCCTGGCTCAAAACTCCCACCAAGACTTCGTCAACGCCCACAACGCTGCCCGAGCTAGGGTCGGTGTCGGGCCCGTCTCTTGGAACTACACCTTGGCAACCTATGCCCAAACTTATGCCAACAAGAAGATTGGCAGTTGTGAGATGAAACATTCGTATGGTCCTTATGGCGAGAATTTAGCCGAAGGGTACGGCGAGATGACGGCAATAGAGGCAGTGAATTTTTGGGTGAGCGAAAAGAAATACTATGACCATAGATCCAACCGGTGCGTCGGGGATGAGTGTCGCCATTACACACAAGTGGTGTGGCGGGACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGTCACAACAATTGGATCTTTGTGATATGCAATTATGATCCTCCTGGCAATTATGTAGGCCAGCTTCCTTACTAA

Coding sequence (CDS)

ATGCCATTGCTCAAGCTTCTCTCCTTCATAACCCTGATGGGGCTGATAACCCTAGCCCCCATCACCCTGGCTCAAAACTCCCACCAAGACTTCGTCAACGCCCACAACGCTGCCCGAGCTAGGGTCGGTGTCGGGCCCGTCTCTTGGAACTACACCTTGGCAACCTATGCCCAAACTTATGCCAACAAGAAGATTGGCAGTTGTGAGATGAAACATTCGTATGGTCCTTATGGCGAGAATTTAGCCGAAGGGTACGGCGAGATGACGGCAATAGAGGCAGTGAATTTTTGGGTGAGCGAAAAGAAATACTATGACCATAGATCCAACCGGTGCGTCGGGGATGAGTGTCGCCATTACACACAAGTGGTGTGGCGGGACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGTCACAACAATTGGATCTTTGTGATATGCAATTATGATCCTCCTGGCAATTATGTAGGCCAGCTTCCTTACTAA

Protein sequence

MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY
Homology
[Close]
BLAST of Cla001246 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-49
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = 1 

Query: 24  AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAE 83
           AQNS QD++N HNAAR +VGVGP++W+  LA YAQ YAN++IG C M HS+GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 84  GYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVKCHNNWIF 143
            + ++ A  AV  WV EK++YD+ SN CVG  C HYTQVVWR++  +GCARV+ +N W F
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFF 142

Query: 144 VICNYDPPGNYVGQLPY 161
           + CNYDPPGN++GQ P+
Sbjct: 143 ITCNYDPPGNFIGQRPF 159

[Close]
BLAST of Cla001246 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.9e-45
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 1 

Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           +P   L+S  TL+  + ++    AQNS QD+++AHN ARA VGV P++W+  +A YAQ Y
Sbjct: 9   LPSFLLVS--TLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNY 68

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGE-MTAIEAVNFWVSEKKYYDHRSNRCV-GDECRH 120
           A++    C + HS+G YGENLAEG G+ MTA +AV  WV EK+YYDH SN C  G  C H
Sbjct: 69  ASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGH 128

Query: 121 YTQVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           YTQVVWR++  VGCARV+C+N    V CNYDPPGNY G+ PY
Sbjct: 129 YTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]
BLAST of Cla001246 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.9e-45
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 1 

Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           MP   L+S  TL+  + ++  + AQNS QD+++AHN ARA VGV P++W+  +A YAQ Y
Sbjct: 9   MPSFFLVS--TLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNY 68

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGE-MTAIEAVNFWVSEKKYYDHRSNRCV-GDECRH 120
            ++    C + HS+G YGENLA+G G+ MTA +AV  WV EK+YYDH SN C  G  C H
Sbjct: 69  VSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGH 128

Query: 121 YTQVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           YTQVVWR++  VGCARVKC+N    V CNYDPPGN +GQ PY
Sbjct: 129 YTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]
BLAST of Cla001246 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.4e-43
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 1 

Query: 10  ITLMGLITLAPITL-AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSC 69
           I L  L+    + L AQ+S QD+VNAHN AR+++GVGP+ W+  LA YA+ YAN+  G C
Sbjct: 11  IILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDC 70

Query: 70  EMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTK 129
            + HS GPYGENLA+  G+++ + AVN WV+EK  Y++ +N C G  C HYTQVVWR++ 
Sbjct: 71  RLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSV 130

Query: 130 HVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            +GCA+V+C+N    + CNYDPPGNY  Q PY
Sbjct: 131 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Cla001246 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-42
Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 1 

Query: 24  AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAE 83
           AQ   ++F+NAHNAAR RVGVGP++W+  LA YAQ YAN++   C M HS GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 84  GYGEMTAIEAVNFWVSEKKYYDHRSNRCV-GDECRHYTQVVWRDTKHVGCARVKCHNNWI 143
            + ++ A  AV  W  EK++YD+ SN C  G  C HYTQVVWR +  +GCARV+C++ W+
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 140

Query: 144 FVICNYDPPGNYV 156
           F+ CNYDPPGNY+
Sbjct: 141 FITCNYDPPGNYI 153

[Close]
BLAST of Cla001246 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.9e-81
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 1 

Query: 2   PLLKLLSFITLMGLIT-LAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 61
           P L L+SF+ +MGLIT LA ITLAQNSHQDFVNAHNAARA+VGVGPVSWNYTLA YAQTY
Sbjct: 4   PKLLLISFM-MMGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTY 63

Query: 62  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 121
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 64  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 123

Query: 122 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPP NYVGQ PY
Sbjct: 124 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]
BLAST of Cla001246 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 102/153 (66.67%), Postives = 122/153 (79.74%), Query Frame = 1 

Query: 8   SFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGS 67
           S I L+  +    I+ AQNS QDFV+ HN  RA VGVGPVSW+ TLA YAQ+YA+ K+ +
Sbjct: 9   STIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDT 68

Query: 68  CEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDT 127
           CEM+HS GPYGENLAEGY EMT +EAV FW +EKK+Y+H  NRCVGDEC HYTQ+VWR T
Sbjct: 69  CEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHYTQIVWRHT 128

Query: 128 KHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            ++GC RVKC NNW+FVICNY+PPGNY+GQ PY
Sbjct: 129 TNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

[Close]
BLAST of Cla001246 vs. TrEMBL
Match: I1ME52_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G062300 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.7e-55
Identity = 93/144 (64.58%), Postives = 115/144 (79.86%), Query Frame = 1 

Query: 17  TLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGP 76
           T  P++LAQN+ QDF++ HN ARA VGVGP+SWN+TL  YAQ YAN++I  C ++HS GP
Sbjct: 18  TTPPLSLAQNTPQDFLDVHNQARAEVGVGPLSWNHTLQAYAQRYANERIPDCNLEHSMGP 77

Query: 77  YGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVK 136
           +GENLAEGYGEM   +AV FW++EK YYDH SN CV DEC HYTQ+VWRD+ H+GCAR K
Sbjct: 78  FGENLAEGYGEMKGSDAVKFWLTEKPYYDHYSNACVHDECLHYTQIVWRDSVHLGCARAK 137

Query: 137 CHNNWIFVICNYDPPGNYVGQLPY 161
           C+N W+FVIC+Y PPGN  G+ PY
Sbjct: 138 CNNGWVFVICSYSPPGNIEGERPY 161

[Close]
BLAST of Cla001246 vs. TrEMBL
Match: A0A0B2RN69_GLYSO (Basic form of pathogenesis-related protein 1 OS=Glycine soja GN=glysoja_005645 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.7e-55
Identity = 93/144 (64.58%), Postives = 115/144 (79.86%), Query Frame = 1 

Query: 17  TLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGP 76
           T  P++LAQN+ QDF++ HN ARA VGVGP+SWN+TL  YAQ YAN++I  C ++HS GP
Sbjct: 18  TTPPLSLAQNTPQDFLDVHNQARAEVGVGPLSWNHTLQAYAQRYANERIPDCNLEHSMGP 77

Query: 77  YGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVK 136
           +GENLAEGYGEM   +AV FW++EK YYDH SN CV DEC HYTQ+VWRD+ H+GCAR K
Sbjct: 78  FGENLAEGYGEMKGSDAVKFWLTEKPYYDHYSNACVHDECLHYTQIVWRDSVHLGCARAK 137

Query: 137 CHNNWIFVICNYDPPGNYVGQLPY 161
           C+N W+FVIC+Y PPGN  G+ PY
Sbjct: 138 CNNGWVFVICSYSPPGNIEGERPY 161

[Close]
BLAST of Cla001246 vs. TrEMBL
Match: V7BUQ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G197500g PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 93/146 (63.70%), Postives = 115/146 (78.77%), Query Frame = 1 

Query: 15  LITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSY 74
           L+    ++LAQNS QD+V  HN ARA VGVGP+SWN+TL  YAQ YANK+I  C ++HS 
Sbjct: 12  LMVTVTVSLAQNSPQDYVEVHNQARAEVGVGPISWNHTLEAYAQRYANKRIPDCNLEHSM 71

Query: 75  GPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCAR 134
           GPYGENLAEGYGEM   +AV FW++EK YYD++SN+CV DEC HYTQ+VWRD+ ++GCAR
Sbjct: 72  GPYGENLAEGYGEMKGSDAVKFWLTEKPYYDYKSNKCVHDECGHYTQIVWRDSVNLGCAR 131

Query: 135 VKCHNNWIFVICNYDPPGNYVGQLPY 161
            KC N W+FVIC+Y PPGN  G+ PY
Sbjct: 132 AKCKNGWMFVICSYSPPGNVEGERPY 157

[Close]
BLAST of Cla001246 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 2.5e-83
Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 1 

Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           +P L L+SF+ +MGLITLAPITLAQNSHQDFVNAHN ARA+VGVGPVSWNYTLA YAQTY
Sbjct: 3   LPKLLLISFM-MMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTY 62

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 63  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 122

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPPGNYVGQ PY
Sbjct: 123 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]
BLAST of Cla001246 vs. NCBI nr
Match: gi|449438289|ref|XP_004136921.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 1 

Query: 2   PLLKLLSFITLMGLIT-LAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 61
           P L L+SF+ +MGLIT LA ITLAQNSHQDFVNAHNAARA+VGVGPVSWNYTLA YAQTY
Sbjct: 4   PKLLLISFM-MMGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTY 63

Query: 62  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 121
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 64  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 123

Query: 122 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPP NYVGQ PY
Sbjct: 124 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]
BLAST of Cla001246 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 104/155 (67.10%), Postives = 124/155 (80.00%), Query Frame = 1 

Query: 6   LLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKI 65
           +LS I L+  +    I+ AQNS QDFV+ HN  RA VGVGPVSW+ TLA YAQ+YA+ KI
Sbjct: 8   ILSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKI 67

Query: 66  GSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWR 125
            +CEM+HS GPYGENLAEGY EMT +EAV FW +EKK+Y+H  NRCVGDEC HYTQ+VWR
Sbjct: 68  DTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWR 127

Query: 126 DTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            T ++GC RVKC NNW+FVICNY+PPGNY+GQ PY
Sbjct: 128 HTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

[Close]
BLAST of Cla001246 vs. NCBI nr
Match: gi|449438291|ref|XP_004136922.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-58
Identity = 102/153 (66.67%), Postives = 122/153 (79.74%), Query Frame = 1 

Query: 8   SFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGS 67
           S I L+  +    I+ AQNS QDFV+ HN  RA VGVGPVSW+ TLA YAQ+YA+ K+ +
Sbjct: 9   STIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDT 68

Query: 68  CEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDT 127
           CEM+HS GPYGENLAEGY EMT +EAV FW +EKK+Y+H  NRCVGDEC HYTQ+VWR T
Sbjct: 69  CEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHYTQIVWRHT 128

Query: 128 KHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            ++GC RVKC NNW+FVICNY+PPGNY+GQ PY
Sbjct: 129 TNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

[Close]
BLAST of Cla001246 vs. NCBI nr
Match: gi|1009150276|ref|XP_015892934.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba])

HSP 1 Score: 233.4 bits (594), Expect = 2.7e-58
Identity = 99/136 (72.79%), Postives = 118/136 (86.76%), Query Frame = 1 

Query: 25  QNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAEG 84
           +N +QDFV AHNAARA+VGVGP++WN+T+A YAQ YAN+KI +CEM+HS GPYGENLAEG
Sbjct: 30  KNPNQDFVRAHNAARAQVGVGPITWNWTVAAYAQNYANQKINNCEMEHSGGPYGENLAEG 89

Query: 85  YGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVKCHNNWIFV 144
           YG MT  EAV FWV+EK YY++R+N CVGDEC HYTQVVWR + H+GCARVKCHN W+FV
Sbjct: 90  YGSMTGEEAVKFWVTEKPYYNYRTNSCVGDECLHYTQVVWRKSVHLGCARVKCHNGWMFV 149

Query: 145 ICNYDPPGNYVGQLPY 161
           IC+YDPPGNY G+ PY
Sbjct: 150 ICSYDPPGNYEGERPY 165

The following BLAST results are available for this feature:
BLAST of Cla001246 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRB1_TOBAC2.3e-4959.85Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PR1A_TOBAC5.9e-4554.32Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1[more]
PR1B_TOBAC5.9e-4554.32Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1[more]
PRB1_ARATH9.4e-4351.97Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR1A_SOLLC1.2e-4256.39Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1[more]
BLAST of Cla001246 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4C1_CUCSA7.9e-8188.75Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1[more]
A0A0A0K6A0_CUCSA1.5e-5866.67Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1[more]
I1ME52_SOYBN5.7e-5564.58Uncharacterized protein OS=Glycine max GN=GLYMA_15G062300 PE=3 SV=1[more]
A0A0B2RN69_GLYSO5.7e-5564.58Basic form of pathogenesis-related protein 1 OS=Glycine soja GN=glysoja_005645 P... [more]
V7BUQ0_PHAVU1.7e-5463.70Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G197500g PE=3 SV=1[more]
BLAST of Cla001246 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110143|ref|XP_008455071.1|2.5e-8389.38PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
gi|449438289|ref|XP_004136921.1|1.1e-8088.75PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|659110137|ref|XP_008455068.1|1.4e-5967.10PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
gi|449438291|ref|XP_004136922.1|2.1e-5866.67PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|1009150276|ref|XP_015892934.1|2.7e-5872.79PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
cellular_component GO:0005615 extracellular space
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001246Cla001246.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 47..65
score: 1.3E-18coord: 93..106
score: 1.3E-18coord: 116..132
score: 1.3E-18coord: 143..156
score: 1.3
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 7..160
score: 2.8
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 19..160
score: 1.4
IPR014044CAP domainPFAMPF00188CAPcoord: 32..148
score: 2.5
IPR014044CAP domainSMARTSM00198SCP_3coord: 26..156
score: 1.8
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 11..160
score: 5.89
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 117..127
scor
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 143..154
scor
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 7..160
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001246Csa7G070230Cucumber (Chinese Long) v2cuwmB607
Cla001246MELO3C018536Melon (DHL92) v3.5.1mewmB244
Cla001246CSPI07G06580Wild cucumber (PI 183967)cpiwmB626
Cla001246Cucsa.218880Cucumber (Gy14) v1cgywmB428
Cla001246CmaCh19G005270Cucurbita maxima (Rimu)cmawmB504
Cla001246CmoCh19G005380Cucurbita moschata (Rifu)cmowmB497
Cla001246Lsi03G006280Bottle gourd (USVL1VR-Ls)lsiwmB269
Cla001246Cp4.1LG15g04200Cucurbita pepo (Zucchini)cpewmB269
Cla001246CsGy7G006210Cucumber (Gy14) v2cgybwmB569
Cla001246Bhi05G000840Wax gourdwgowmB286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001246Cucurbita pepo (Zucchini)cpewmB268
Cla001246Cucurbita pepo (Zucchini)cpewmB453
Cla001246Cucurbita pepo (Zucchini)cpewmB665
Cla001246Bottle gourd (USVL1VR-Ls)lsiwmB268
Cla001246Cucumber (Gy14) v2cgybwmB567
Cla001246Melon (DHL92) v3.6.1medwmB232
Cla001246Melon (DHL92) v3.6.1medwmB236
Cla001246Melon (DHL92) v3.6.1medwmB522
Cla001246Silver-seed gourdcarwmB0375
Cla001246Silver-seed gourdcarwmB0455
Cla001246Silver-seed gourdcarwmB0733
Cla001246Cucumber (Chinese Long) v3cucwmB635
Cla001246Cucumber (Chinese Long) v3cucwmB638
Cla001246Watermelon (97103) v2wmwmbB317
Cla001246Watermelon (97103) v2wmwmbB322
Cla001246Wax gourdwgowmB275
Cla001246Watermelon (97103) v1wmwmB054
Cla001246Cucumber (Gy14) v1cgywmB427
Cla001246Cucurbita maxima (Rimu)cmawmB127
Cla001246Cucurbita maxima (Rimu)cmawmB503
Cla001246Cucurbita maxima (Rimu)cmawmB725
Cla001246Cucurbita moschata (Rifu)cmowmB109
Cla001246Cucurbita moschata (Rifu)cmowmB496
Cla001246Cucurbita moschata (Rifu)cmowmB721
Cla001246Melon (DHL92) v3.5.1mewmB240
Cla001246Melon (DHL92) v3.5.1mewmB537
Cla001246Watermelon (Charleston Gray)wcgwmB198
Cla001246Watermelon (Charleston Gray)wcgwmB203
Cla001246Cucumber (Chinese Long) v2cuwmB605