Cla001193 (gene) Watermelon (97103) v1

NameCla001193
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGlucose-6-phosphate 1-dehydrogenase (AHRD V1 ***- B9SW52_RICCO); contains Interpro domain(s) IPR001282 Glucose-6-phosphate dehydrogenase
LocationChr4 : 7982364 .. 7982787 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTAGATCGGAGTGATCTGAACTTGCTGTATCGATCTAGGTATGAGAACTTCAACAGTGTGATTAATAGGGTTGCTTCATATTTTACATTTCTATTTTGTTTGTTAATATCATAGAGAAGGTACTAGGTGGGGTTTTGTTGACAATTCAATGATCATGTGAAGGTACCCGAGCGAAATACCAGACGCATATGAGAGGTTGCTTTTGGATGCTGTTGAAGGGGAGCGAAGGTTATTCATTAGGAGCGATGAGCTCGATGCTGCATGGTCGTTGTTCACTCCATTGTTAAATGAACTTGAAGAGAAAAAGATTGCTCCAGAGCTTTATCCCTATGGAAGCAGGGGGCCAGTGGGGGCTCACTACTTAGCTGCCAAGTACAATGTAAGATGGGGAGATCTAGGGGAGGACCGTGACCCTTAG

mRNA sequence

ATGCGATTAGATCGGAGTGATCTGAACTTGCTGTATCGATCTAGGTACCCGAGCGAAATACCAGACGCATATGAGAGGTTGCTTTTGGATGCTGTTGAAGGGGAGCGAAGGTTATTCATTAGGAGCGATGAGCTCGATGCTGCATGGTCGTTGTTCACTCCATTGTTAAATGAACTTGAAGAGAAAAAGATTGCTCCAGAGCTTTATCCCTATGGAAGCAGGGGGCCAGTGGGGGCTCACTACTTAGCTGCCAAGTACAATGTAAGATGGGGAGATCTAGGGGAGGACCGTGACCCTTAG

Coding sequence (CDS)

ATGCGATTAGATCGGAGTGATCTGAACTTGCTGTATCGATCTAGGTACCCGAGCGAAATACCAGACGCATATGAGAGGTTGCTTTTGGATGCTGTTGAAGGGGAGCGAAGGTTATTCATTAGGAGCGATGAGCTCGATGCTGCATGGTCGTTGTTCACTCCATTGTTAAATGAACTTGAAGAGAAAAAGATTGCTCCAGAGCTTTATCCCTATGGAAGCAGGGGGCCAGTGGGGGCTCACTACTTAGCTGCCAAGTACAATGTAAGATGGGGAGATCTAGGGGAGGACCGTGACCCTTAG

Protein sequence

MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELEEKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP
BLAST of Cla001193 vs. Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-46
Identity = 88/95 (92.63%), Postives = 88/95 (92.63%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYP EIPDAYERLLLDA+EGERRLFIRSDELDAAW LFTP L ELE
Sbjct: 481 MRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWDLFTPALKELE 540

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGE 96
           EKKI PELYPYGSRGPVGAHYLA+KYNVRWGDLGE
Sbjct: 541 EKKIIPELYPYGSRGPVGAHYLASKYNVRWGDLGE 575

BLAST of Cla001193 vs. Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-44
Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLY+++Y  EIPDAYERLLLDA+EGERRLFIRSDELDAAW+LFTPLL ELE
Sbjct: 481 MRLDRSDLNLLYKAKYRGEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKELE 540

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGED 97
           EKKIAPELYPYGSRGPVGAHYLAAK+NVRWGDL  D
Sbjct: 541 EKKIAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGD 576

BLAST of Cla001193 vs. Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.0e-43
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDR+DLNL Y +RY  EIPDAYERLLLDA+EGERRLFIRSD+LDAAWSLFTPLL ELE
Sbjct: 477 MRLDRTDLNLCYSTRYRGEIPDAYERLLLDAIEGERRLFIRSDKLDAAWSLFTPLLKELE 536

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDL-GED 97
           EKK+APELYPYGSRGPVGAHYLAAK+NVRWGDL GED
Sbjct: 537 EKKVAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGED 573

BLAST of Cla001193 vs. Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-41
Identity = 79/93 (84.95%), Postives = 84/93 (90.32%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRS+LNLLY +RY  EIPDAYERLLLDA+EGERRLFIRSDELDAAWSLFTP+L ELE
Sbjct: 500 MRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLKELE 559

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDL 94
           +KKI PE YPYGSRGP+GAHYLAA+Y VRWGDL
Sbjct: 560 DKKIVPEYYPYGSRGPIGAHYLAARYKVRWGDL 592

BLAST of Cla001193 vs. Swiss-Prot
Match: G6PD2_ARATH (Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-40
Identity = 79/97 (81.44%), Postives = 85/97 (87.63%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRS+LNLLY +RY  EIPDAYERLLLDA+EGERRLFIRSDELDAAWSLFTPLL E+E
Sbjct: 500 MRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKEIE 559

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDR 98
           EKK  PE YPYGSRGPVGAHYLAAK+ V+WGD+  D+
Sbjct: 560 EKKRIPEYYPYGSRGPVGAHYLAAKHKVQWGDVSIDQ 596

BLAST of Cla001193 vs. TrEMBL
Match: A0A0A0KYJ5_CUCSA (Glucose-6-phosphate 1-dehydrogenase OS=Cucumis sativus GN=Csa_4G443140 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.6e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE
Sbjct: 496 MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 555

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP 100
           EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP
Sbjct: 556 EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP 594

BLAST of Cla001193 vs. TrEMBL
Match: A0A0B0P950_GOSAR (Glucose-6-phosphate 1-dehydrogenase OS=Gossypium arboreum GN=F383_05443 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-44
Identity = 89/98 (90.82%), Postives = 93/98 (94.90%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYR+RYP+EIPDAYERLLLDA+ GERRLFIRSDELDAAWSLFTPLL ELE
Sbjct: 469 MRLDRSDLNLLYRARYPTEIPDAYERLLLDAIAGERRLFIRSDELDAAWSLFTPLLKELE 528

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRD 99
            KKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLG + D
Sbjct: 529 AKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGGEDD 566

BLAST of Cla001193 vs. TrEMBL
Match: D7MHW1_ARALL (Glucose-6-phosphate 1-dehydrogenase OS=Arabidopsis lyrata subsp. lyrata GN=G6PD1 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-44
Identity = 88/95 (92.63%), Postives = 90/95 (94.74%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYP EIPDAYERLLLDA+EGERRLFIRSDELDAAW LFTP L ELE
Sbjct: 483 MRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWDLFTPALKELE 542

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGE 96
           EKKI PELYPYGSRGPVGAHYLA+KYNVRWGDLGE
Sbjct: 543 EKKIIPELYPYGSRGPVGAHYLASKYNVRWGDLGE 577

BLAST of Cla001193 vs. TrEMBL
Match: Q56WK7_ARATH (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Arabidopsis thaliana GN=At5g35790 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-44
Identity = 88/95 (92.63%), Postives = 90/95 (94.74%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYP EIPDAYERLLLDA+EGERRLFIRSDELDAAW LFTP L ELE
Sbjct: 269 MRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWDLFTPALKELE 328

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGE 96
           EKKI PELYPYGSRGPVGAHYLA+KYNVRWGDLGE
Sbjct: 329 EKKIIPELYPYGSRGPVGAHYLASKYNVRWGDLGE 363

BLAST of Cla001193 vs. TrEMBL
Match: I6PCB9_9ROSI (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLL+R+RYP EIPDAYERLLLDA+EGERRLFIRSDELDAAWSLFTPLL ELE
Sbjct: 158 MRLDRSDLNLLFRTRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKELE 217

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDL-GED 97
           EKKI PELYPYGSRGPVGAHYLAAKYNVRWGDL GED
Sbjct: 218 EKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSGED 254

BLAST of Cla001193 vs. NCBI nr
Match: gi|778694807|ref|XP_011653867.1| (PREDICTED: glucose-6-phosphate 1-dehydrogenase 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE
Sbjct: 496 MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 555

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP 100
           EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP
Sbjct: 556 EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP 594

BLAST of Cla001193 vs. NCBI nr
Match: gi|659069424|ref|XP_008449766.1| (PREDICTED: glucose-6-phosphate 1-dehydrogenase 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE
Sbjct: 496 MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 555

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP 100
           EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP
Sbjct: 556 EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRDP 594

BLAST of Cla001193 vs. NCBI nr
Match: gi|985435730|ref|XP_015382930.1| (PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic [Citrus sinensis])

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYP+EIPDAYERL+LDA+EGERRLFIRSDELDAAW+LFTPLL ELE
Sbjct: 159 MRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELE 218

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDL-GED 97
           EKKI PELYPYGSRGPVGAHYLAAKYNVRWGDL GED
Sbjct: 219 EKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSGED 255

BLAST of Cla001193 vs. NCBI nr
Match: gi|568830360|ref|XP_006469469.1| (PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Citrus sinensis])

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYRSRYP+EIPDAYERL+LDA+EGERRLFIRSDELDAAW+LFTPLL ELE
Sbjct: 489 MRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELE 548

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDL-GED 97
           EKKI PELYPYGSRGPVGAHYLAAKYNVRWGDL GED
Sbjct: 549 EKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSGED 585

BLAST of Cla001193 vs. NCBI nr
Match: gi|728841221|gb|KHG20664.1| (Glucose-6-phosphate 1-dehydrogenase-2C chloroplastic [Gossypium arboreum])

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-44
Identity = 89/98 (90.82%), Postives = 93/98 (94.90%), Query Frame = 1

Query: 1   MRLDRSDLNLLYRSRYPSEIPDAYERLLLDAVEGERRLFIRSDELDAAWSLFTPLLNELE 60
           MRLDRSDLNLLYR+RYP+EIPDAYERLLLDA+ GERRLFIRSDELDAAWSLFTPLL ELE
Sbjct: 469 MRLDRSDLNLLYRARYPTEIPDAYERLLLDAIAGERRLFIRSDELDAAWSLFTPLLKELE 528

Query: 61  EKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGEDRD 99
            KKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLG + D
Sbjct: 529 AKKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLGGEDD 566

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
G6PD1_ARATH3.3e-4692.63Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=... [more]
G6PDC_SOLTU1.8e-4488.54Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=... [more]
G6PDC_SPIOL2.0e-4387.63Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD ... [more]
G6PDC_TOBAC1.4e-4184.95Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=... [more]
G6PD2_ARATH1.2e-4081.44Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=... [more]
Match NameE-valueIdentityDescription
A0A0A0KYJ5_CUCSA2.6e-50100.00Glucose-6-phosphate 1-dehydrogenase OS=Cucumis sativus GN=Csa_4G443140 PE=3 SV=1[more]
A0A0B0P950_GOSAR1.7e-4490.82Glucose-6-phosphate 1-dehydrogenase OS=Gossypium arboreum GN=F383_05443 PE=3 SV=... [more]
D7MHW1_ARALL3.7e-4492.63Glucose-6-phosphate 1-dehydrogenase OS=Arabidopsis lyrata subsp. lyrata GN=G6PD1... [more]
Q56WK7_ARATH3.7e-4492.63Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Arabidopsis thaliana GN=At5g35... [more]
I6PCB9_9ROSI3.7e-4492.78Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Dimocarpus longan PE=2 SV=1[more]
Match NameE-valueIdentityDescription
gi|778694807|ref|XP_011653867.1|3.8e-50100.00PREDICTED: glucose-6-phosphate 1-dehydrogenase 1, chloroplastic-like [Cucumis sa... [more]
gi|659069424|ref|XP_008449766.1|3.8e-50100.00PREDICTED: glucose-6-phosphate 1-dehydrogenase 1, chloroplastic-like [Cucumis me... [more]
gi|985435730|ref|XP_015382930.1|2.4e-4492.78PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic [Citrus sinensis][more]
gi|568830360|ref|XP_006469469.1|2.4e-4492.78PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Citrus sinen... [more]
gi|728841221|gb|KHG20664.1|2.4e-4490.82Glucose-6-phosphate 1-dehydrogenase-2C chloroplastic [Gossypium arboreum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001282G6P_DH
IPR022675G6P_DH_C
Vocabulary: Molecular Function
TermDefinition
GO:0004345glucose-6-phosphate dehydrogenase activity
GO:0050661NADP binding
Vocabulary: Biological Process
TermDefinition
GO:0006006glucose metabolic process
GO:0055114oxidation-reduction process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006006 glucose metabolic process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009051 pentose-phosphate shunt, oxidative branch
biological_process GO:0015979 photosynthesis
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009637 response to blue light
biological_process GO:0006098 pentose-phosphate shunt
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0004345 glucose-6-phosphate dehydrogenase activity
molecular_function GO:0050661 NADP binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU51253watermelon EST collection version 2.0transcribed_cluster
WMU75979watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001193Cla001193.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU75979WMU75979transcribed_cluster
WMU51253WMU51253transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001282Glucose-6-phosphate dehydrogenasePANTHERPTHR23429GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PDcoord: 1..99
score: 2.4
IPR022675Glucose-6-phosphate dehydrogenase, C-terminalPFAMPF02781G6PD_Ccoord: 2..90
score: 3.1
NoneNo IPR availableGENE3DG3DSA:3.30.360.10coord: 1..90
score: 3.3
NoneNo IPR availablePANTHERPTHR23429:SF1GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 1, CHLOROPLASTICcoord: 1..99
score: 2.4
NoneNo IPR availableunknownSSF55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 15..90
score: 4.58