Cla001152 (gene) Watermelon (97103) v1

Overview
NameCla001152
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr10 : 3897362 .. 3897610 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAGGCAAGAGGACGAAGCCTTTCTCCTCACTAAAAACGCAGTCATGACCACCCTTGCCGGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAACGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTCCGTTAATAACGTCGATGACCTAGATTATGATTCGTTCGAGGGCATCGATATCAACGACCCATTTTTAGACACGCAACCATATTAG

mRNA sequence

ATGACTAGGCAAGAGGACGAAGCCTTTCTCCTCACTAAAAACGCAGTCATGACCACCCTTGCCGGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAACGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTCCGTTAATAACGTCGATGACCTAGATTATGATTCGTTCGAGGGCATCGATATCAACGACCCATTTTTAGACACGCAACCATATTAG

Coding sequence (CDS)

ATGACTAGGCAAGAGGACGAAGCCTTTCTCCTCACTAAAAACGCAGTCATGACCACCCTTGCCGGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAACGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTCCGTTAATAACGTCGATGACCTAGATTATGATTCGTTCGAGGGCATCGATATCAACGACCCATTTTTAGACACGCAACCATATTAG

Protein sequence

MTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLDYDSFEGIDINDPFLDTQPY
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001152Cla001152.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001152Cla97C10G187970Watermelon (97103) v2wmwmbB058
Cla001152ClCG10G003450Watermelon (Charleston Gray)wcgwmB058
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001152Silver-seed gourdcarwmB0862
Cla001152Silver-seed gourdcarwmB0865
Cla001152Silver-seed gourdcarwmB0866
Cla001152Cucumber (Chinese Long) v3cucwmB211
Cla001152Cucumber (Chinese Long) v3cucwmB205
Cla001152Cucumber (Chinese Long) v3cucwmB398
Cla001152Watermelon (97103) v2wmwmbB050
Cla001152Watermelon (97103) v2wmwmbB053
Cla001152Wax gourdwgowmB057
Cla001152Wax gourdwgowmB163
Cla001152Watermelon (97103) v1wmwmB049
Cla001152Cucumber (Gy14) v1cgywmB547
Cla001152Cucumber (Gy14) v1cgywmB584
Cla001152Cucumber (Gy14) v1cgywmB585
Cla001152Cucurbita maxima (Rimu)cmawmB297
Cla001152Cucurbita maxima (Rimu)cmawmB785
Cla001152Cucurbita maxima (Rimu)cmawmB790
Cla001152Cucurbita moschata (Rifu)cmowmB291
Cla001152Cucurbita moschata (Rifu)cmowmB778
Cla001152Cucurbita moschata (Rifu)cmowmB784
Cla001152Wild cucumber (PI 183967)cpiwmB195
Cla001152Wild cucumber (PI 183967)cpiwmB202
Cla001152Wild cucumber (PI 183967)cpiwmB381
Cla001152Melon (DHL92) v3.5.1mewmB006
Cla001152Melon (DHL92) v3.5.1mewmB449
Cla001152Watermelon (Charleston Gray)wcgwmB001
Cla001152Watermelon (Charleston Gray)wcgwmB053
Cla001152Watermelon (Charleston Gray)wcgwmB119
Cla001152Cucumber (Chinese Long) v2cuwmB195
Cla001152Cucumber (Chinese Long) v2cuwmB202
Cla001152Cucumber (Chinese Long) v2cuwmB375
Cla001152Cucurbita pepo (Zucchini)cpewmB207
Cla001152Cucurbita pepo (Zucchini)cpewmB828
Cla001152Cucurbita pepo (Zucchini)cpewmB835
Cla001152Bottle gourd (USVL1VR-Ls)lsiwmB008
Cla001152Bottle gourd (USVL1VR-Ls)lsiwmB428
Cla001152Bottle gourd (USVL1VR-Ls)lsiwmB431
Cla001152Cucumber (Gy14) v2cgybwmB184
Cla001152Cucumber (Gy14) v2cgybwmB190
Cla001152Cucumber (Gy14) v2cgybwmB348
Cla001152Melon (DHL92) v3.6.1medwmB004
Cla001152Melon (DHL92) v3.6.1medwmB433
Cla001152Melon (DHL92) v3.6.1medwmB440