Cla001146 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001146
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Membrane protein (AHRD V1 *- A6MD08_9ORYZ); contains Interpro domain(s) IPR002610 Peptidase S54, rhomboid
Location	Chr10 : 3809875 .. 3812183 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGTCGAGATCTGGAGAGAGGAGGGGCTAAACCCATTAACCCACCTGGGAATTACTCAAATACCTATTACCAAGAAACGTCAGAGAAACAATGGACTTCTTGGTTGGTTCCTATGTTCGTGGTGGCTAATGTTGCTATGTTCATTGTGGTTATGTATGTTAATAACTGTCCCAAACATTACCTGGGTTCTGAAGAATGTGTTGCCAGGTTTCTTGGAAGGTTTTCTTTTGAGCCTCTTAGAGTGAATCCTCTGTTTGGTCCTTCTTCTTCCACGTGAGTTTTCTGCTCTCCACTTGCTTCTAAATTGTTCGATTTTTCCAGTAGGTTTCTATGGACTCTCTTCTGTTTTGTTTTAACCCTTCTACTTGGGTTCTTAATTGAGGATGTTTGACATTATTTTCTTCTTTATCAATTGGGGTTTTGTGGTAATGAGTTTTTATTGACATTGGATGTCTTTAAATCACTGTGTTAATCTGTTTTAAGTTGAGATTCCTTGCTTTCTTTAAGATTCTTATATTTGATTGTTTGAGGTTTTTTTTTTGTGCATTTGTGTAATCTATAGCCTTATGGGTTCTAGTTCATTGTGGGTCAAATGACAAATCTACCTCCATTAATGGACTAATTTATAAGATGGCTTTGGGGAACTCCATCAGAAGTTATCTAATTTCTTCTTTGGGAATTATCCTGAGGAAAAGTTCTAATCTGTGCTTTTATTTTGTGATTACAAAAAGTTTTTCCTTGGAGAAGCTTTTTAATTGAATACTGTAAAGTTCCCCCAGGTCTCTCTCTTTTCATCTCAGTTAAACTAATCATCTGATAAGATAATTGTGGAAGAATGGCTCTTCTGTTTCAACATCCGTAATGATGATTGTCGATAATGTTCTTGTGTGTTTGAGTTTTGTATTCGTCTATAGTGCGGATTCAGTTTAACTGTGTCGTTTCCATTTGTGGAAGAGACTTATTTTTAAAACCATAGAAGAAACACATAAATGGCCTAGTTTATTTCAGGGAGAATGCAAAGAATAACCTGAGTACTTTTTGGACATTAGTTTTTACCATAATTCGTATCATTTCTTTCAGACTGCAGAAACTAGGAGCCCTGGAATGGGAAAAAATAGTTCACGGACATCAAGCATGGAGACTCATTACTGGTATTTGGCTACATGCTGGAGTAATTCATTTGCTTGCAAATATGTTGAGCTTGGTATTTATTGGGATACGTCTTGAACAACAATTTGGATTCAGTATGTCAAGTTTCTTACTTTGGCCTGTATTTTACTTTATTTCTTTTCAACTCCTAAAGTTTGGATGACTAAAATTTCATGCTCACTATTTGTTTGTTGATATAATCATGCAGTTCGGGTTGGAATACTATACTTGCTTTCGGGTTTAGGTGGAAGCATATTATCTTCTCTTTTCATACAAAACAACATCTCTGTTGGTGCATCTGGTGCTTTGTTTGGGCTTCTTGGTGCAATGTTATCAGAACTTTTGACAAACTGGACTATATATACAGATAAGGTGAGTTGAAGACACAAAAGATGAATAAGGGTGAAGTAATTGGTCTTATTTCCATATTGGTTGGTGTGTACCTTATTTGAACTTATCATGTTATCAACAGCTAATTTATTGTTCCTGTAGGCTGCAGCTCTCATCACACTCGTCGTCATCATCGTCATTAACTTGGCTGTTGGGATTCTTCCTCATGTCGATAACTTTGCCCATATTGGCGGATTCTTGACAGGCTTTCTTCTTGGCTTTGTTTTGCTTCTCCGTCCTCAGTTCGGGTGGATGGAACGCCGACATCTCCCTGCAAGTTCTCGTGCTGTACCCAAGCACAAGGTTTACCAATACATTTTATGCTTTGTGGCCCTGGCTCTTCTGATTGTCGGGTAAGTATATCAACTCGGTTTGTGGAAGATCAGATTTTAGGGAACATAGCCTCTATCTAGACTCAAGAATTATGCATCTAATATACAGATGGAACTGTGAAGATGATTATAAATTATAATTCAGCCTGTACACAGTTTTAGCTTCGATGTTGAGTTAGTTAATTATAACTTGGAAGGTCCTCAACAGAGATGATGTATGTTGTTTGTTATGTTGTGTCTTCTTTCTGTTGTGCTACTGATTGATGAATGCTGATAAGAGATGAAAAGAAAACTTCATACTGTCTCGTTTCGTTGTTGCAGATTCACGATTGGGTTGGTGATGCTATTTCGAGGCGAGAACGGAAACAACCATTGCAGCTGGTGTCATTATCTAAGTTGTGTGCCAACGTCAAAATGGGAATGTGGGAACTGA

mRNA sequence

ATGGGTAGTCGAGATCTGGAGAGAGGAGGGGCTAAACCCATTAACCCACCTGGGAATTACTCAAATACCTATTACCAAGAAACGTCAGAGAAACAATGGACTTCTTGGTTGGTTCCTATGTTCGTGGTGGCTAATGTTGCTATGTTCATTGTGGTTATGTATGTTAATAACTGTCCCAAACATTACCTGGGTTCTGAAGAATGTGTTGCCAGGTTTCTTGGAAGGTTTTCTTTTGAGCCTCTTAGAGTGAATCCTCTGTTTGGTCCTTCTTCTTCCACACTGCAGAAACTAGGAGCCCTGGAATGGGAAAAAATAGTTCACGGACATCAAGCATGGAGACTCATTACTGGTATTTGGCTACATGCTGGAGTAATTCATTTGCTTGCAAATATGTTGAGCTTGGTATTTATTGGGATACGTCTTGAACAACAATTTGGATTCATTCGGGTTGGAATACTATACTTGCTTTCGGGTTTAGGTGGAAGCATATTATCTTCTCTTTTCATACAAAACAACATCTCTGTTGGTGCATCTGGTGCTTTGTTTGGGCTTCTTGGTGCAATGTTATCAGAACTTTTGACAAACTGGACTATATATACAGATAAGGCTGCAGCTCTCATCACACTCGTCGTCATCATCGTCATTAACTTGGCTGTTGGGATTCTTCCTCATGTCGATAACTTTGCCCATATTGGCGGATTCTTGACAGGCTTTCTTCTTGGCTTTGTTTTGCTTCTCCGTCCTCAGTTCGGGTGGATGGAACGCCGACATCTCCCTGCAAGTTCTCGTGCTGTACCCAAGCACAAGGTTTACCAATACATTTTATGCTTTGTGGCCCTGGCTCTTCTGATTGTCGGATTCACGATTGGGTTGGTGATGCTATTTCGAGGCGAGAACGGAAACAACCATTGCAGCTGGTGTCATTATCTAAGTTGTGTGCCAACGTCAAAATGGGAATGTGGGAACTGA

Coding sequence (CDS)

ATGGGTAGTCGAGATCTGGAGAGAGGAGGGGCTAAACCCATTAACCCACCTGGGAATTACTCAAATACCTATTACCAAGAAACGTCAGAGAAACAATGGACTTCTTGGTTGGTTCCTATGTTCGTGGTGGCTAATGTTGCTATGTTCATTGTGGTTATGTATGTTAATAACTGTCCCAAACATTACCTGGGTTCTGAAGAATGTGTTGCCAGGTTTCTTGGAAGGTTTTCTTTTGAGCCTCTTAGAGTGAATCCTCTGTTTGGTCCTTCTTCTTCCACACTGCAGAAACTAGGAGCCCTGGAATGGGAAAAAATAGTTCACGGACATCAAGCATGGAGACTCATTACTGGTATTTGGCTACATGCTGGAGTAATTCATTTGCTTGCAAATATGTTGAGCTTGGTATTTATTGGGATACGTCTTGAACAACAATTTGGATTCATTCGGGTTGGAATACTATACTTGCTTTCGGGTTTAGGTGGAAGCATATTATCTTCTCTTTTCATACAAAACAACATCTCTGTTGGTGCATCTGGTGCTTTGTTTGGGCTTCTTGGTGCAATGTTATCAGAACTTTTGACAAACTGGACTATATATACAGATAAGGCTGCAGCTCTCATCACACTCGTCGTCATCATCGTCATTAACTTGGCTGTTGGGATTCTTCCTCATGTCGATAACTTTGCCCATATTGGCGGATTCTTGACAGGCTTTCTTCTTGGCTTTGTTTTGCTTCTCCGTCCTCAGTTCGGGTGGATGGAACGCCGACATCTCCCTGCAAGTTCTCGTGCTGTACCCAAGCACAAGGTTTACCAATACATTTTATGCTTTGTGGCCCTGGCTCTTCTGATTGTCGGATTCACGATTGGGTTGGTGATGCTATTTCGAGGCGAGAACGGAAACAACCATTGCAGCTGGTGTCATTATCTAAGTTGTGTGCCAACGTCAAAATGGGAATGTGGGAACTGA

Protein sequence

MGSRDLERGGAKPINPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRGENGNNHCSWCHYLSCVPTSKWECGN

Homology

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BLAST of Cla001146 vs. Swiss-Prot
Match: RBL2_ARATH (RHOMBOID-like protein 2 OS=Arabidopsis thaliana GN=RBL2 PE=1 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.4e-130
Identity = 226/322 (70.19%), Postives = 266/322 (82.61%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNYSNTYYQETS-EKQWTSWLVPMFVVANVAMFIVVMYVNNCP 60
           M +RD+ER G K      NY   +Y+E+S E  WTSWL+P  VVAN+A+FI VM+VN+CP
Sbjct: 1   MANRDVERVGKKNRGANNNY---FYEESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCP 60

Query: 61  KHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGI 120
           K   G ++ECVARFLGRFSF+PL+ NPLFGPSSSTL+K+GALEW K+VH HQ WRL++ +
Sbjct: 61  KKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCM 120

Query: 121 WLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGAS 180
           WLHAG+IHLL NMLSL+FIGIRLEQQFGFIRVG++YL+SGLGGSILSSLF+Q +ISVGAS
Sbjct: 121 WLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVGAS 180

Query: 181 GALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGF 240
           GALFGLLGAMLSELLTNWTIY +KAAALITL+ II INLA+G+LP VDNFAHIGGFLTGF
Sbjct: 181 GALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFLTGF 240

Query: 241 LLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRGE 300
            LGFVLL+RPQ+GW   R    +SR   K+ +YQY+L  V++ LL+VG T+ LVMLF+GE
Sbjct: 241 CLGFVLLVRPQYGWEASR--TNTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLFKGE 300

Query: 301 NGNNHCSWCHYLSCVPTSKWEC 321
           NGN HC WCHYLSC PTSKW C
Sbjct: 301 NGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Cla001146 vs. Swiss-Prot
Match: RBL3_ARATH (RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 5.0e-128
Identity = 217/325 (66.77%), Postives = 258/325 (79.38%), Query Frame = 1


Query: 1   MGSR--DLERGGAKPINPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNC 60
           +GSR  D  R G  P+    + S  +       +WTSWLVPMFVVANVA+F+V M+VNNC
Sbjct: 19  IGSRGGDRNRIGPPPLPVALSSSTEFGDNALSSRWTSWLVPMFVVANVAVFVVAMFVNNC 78

Query: 61  PKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLI 120
           P H+        CVA+FLGR SFEPLR NPLFGPSS TL+KLGALEW K+V   + WRL+
Sbjct: 79  PNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLL 138

Query: 121 TGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISV 180
           T IWLHAGVIHL ANMLSLVFIGIRLEQQFGF+R+G++YLLSG+GGS+LSSLFI+N+ISV
Sbjct: 139 TCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISV 198

Query: 181 GASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLG+MLSEL TNWTIY++K AAL+TL+ +I+INLA+GILPHVDNFAH+GGF+
Sbjct: 199 GASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVGGFV 258

Query: 241 TGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLF 300
           TGFLLGF+LL RPQF W+ R H+P  +    K+K YQY+L  ++L LLI GF + L+MLF
Sbjct: 259 TGFLLGFILLARPQFKWLAREHMPQGTPLRYKYKTYQYLLWLLSLVLLIAGFVVALLMLF 318

Query: 301 RGENGNNHCSWCHYLSCVPTSKWEC 321
           RGENGN+HC WCHYL CVPTS W C
Sbjct: 319 RGENGNDHCRWCHYLRCVPTSSWRC 343

[Close]

BLAST of Cla001146 vs. Swiss-Prot
Match: RBL1_ARATH (RHOMBOID-like protein 1 OS=Arabidopsis thaliana GN=RBL1 PE=2 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.1e-114
Identity = 205/343 (59.77%), Postives = 249/343 (72.59%), Query Frame = 1


Query: 3   SRDLERG-GAKPINPPGNYSNTYYQETSE---------------------KQWTSWLVPM 62
           +RD   G   K +NPP   +N    ETS                      K W  WLVP 
Sbjct: 2   ARDRREGLEIKVVNPPAAATNNVAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLVPA 61

Query: 63  FVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGAL 122
            VVAN+A+F + M++NNCPK+   S  C+ARFLGRF+F+P++ NPL GPSS TL+K+GAL
Sbjct: 62  IVVANIALFAISMFINNCPKN---SAYCLARFLGRFAFQPMKENPLLGPSSLTLEKMGAL 121

Query: 123 EWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLG 182
           +   +VH H+ WRL T IWLHAGV H+LANMLSL+FIGIRLEQ+FGF+R+G+LY++SG G
Sbjct: 122 DVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFG 181

Query: 183 GSILSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVG 242
           GS+LSSLF +  ISVGASGALFGLLGAMLSELLTNWTIY +K AAL+TL+ II INLAVG
Sbjct: 182 GSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVG 241

Query: 243 ILPHVDNFAHIGGFLTGFLLGFVLLLRPQFGWMERRHLP---ASSRAVPKHKVYQYILCF 302
           ILPHVDNFAH+GGF +GFLLGFV L+RPQ+G+  +R+ P   A+  A  KHK YQY+L  
Sbjct: 242 ILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWI 301

Query: 303 VALALLIVGFTIGLVMLFRGENGNNHCSWCHYLSCVPTSKWEC 321
            +L LLI G+T GLV+L RG + N HCSWCHYLSC+PTS W C
Sbjct: 302 TSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 341

[Close]

BLAST of Cla001146 vs. Swiss-Prot
Match: RBL6_ARATH (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.0e-112
Identity = 196/322 (60.87%), Postives = 238/322 (73.91%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60
           M SRD+ERG                +   + QWT+WL P  VVANV++FIVVMY N+CPK
Sbjct: 1   MRSRDMERGR---------------KHRGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPK 60

Query: 61  HYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIW 120
              G+  +CVA+ L RFSF+PLR NP  GPSSSTL+KLGAL+W+K+V G++ WRLIT +W
Sbjct: 61  TTTGANGDCVAKLLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMW 120

Query: 121 LHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASG 180
           LHAG+IHL+ NM  ++  GIRLEQQFGFIR+G++YL+SG GGSILS+LF+Q +ISVGASG
Sbjct: 121 LHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISVGASG 180

Query: 181 ALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGFL 240
           AL GL+GAMLSELLTNWTIY  K  AL++ + II INLA+G+LP VDNFAHIGG LTGF 
Sbjct: 181 ALLGLMGAMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFC 240

Query: 241 LGFVLLLRPQFGWME-RRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRGE 300
           LGF+LL++PQ GW E R      +RA  K+   QY+L FVA  L++ G T+GLVMLF GE
Sbjct: 241 LGFILLMQPQSGWEEFRNSSQYGARARSKYNPCQYVLFFVAAVLVVAGLTVGLVMLFDGE 300

Query: 301 NGNNHCSWCHYLSCVPTSKWEC 321
           NGN HC WCH L C PTSKW C
Sbjct: 301 NGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Cla001146 vs. Swiss-Prot
Match: RBL4_ARATH (RHOMBOID-like protein 4 OS=Arabidopsis thaliana GN=RBL4 PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.8e-107
Identity = 177/290 (61.03%), Postives = 229/290 (78.97%), Query Frame = 1


Query: 31  KQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPS 90
           + W  WL+P FVVANVA+F++ MYVNNCPK    S +C A FLGRFSF+  R NPL GPS
Sbjct: 62  RSWFPWLIPCFVVANVAVFVITMYVNNCPKK---SGDCFADFLGRFSFQNTRENPLLGPS 121

Query: 91  SSTLQKLGALEWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRV 150
           S TLQ +G L+ +K+V G + WRL++  WLH GV+HLL NML+L+FIGIR+E++FGFIR+
Sbjct: 122 SLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRI 181

Query: 151 GILYLLSGLGGSILSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTDKAAALITLV 210
           G+LYL+SG GGSILS+LF+++NISVGASGA+FGLLG MLSE+  NWTIY++K   ++TLV
Sbjct: 182 GLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLV 241

Query: 211 VIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKV 270
           +I+ +NL +G+LP VDNFAHIGGF TGFLLGFVLL+RP +GW+ +R+ P +     + K+
Sbjct: 242 LIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGAK--PHRFKI 301

Query: 271 YQYILCFVALALLIVGFTIGLVMLFRGENGNNHCSWCHYLSCVPTSKWEC 321
           YQ IL  ++L +L+ GF +GL+ LF   +GN HCSWCHYLSCVPTSKW C
Sbjct: 302 YQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSC 346

[Close]

BLAST of Cla001146 vs. TrEMBL
Match: A0A0A0L1V2_CUCSA (Rhomboid-like protein OS=Cucumis sativus GN=Csa_3G038720 PE=3 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 1.2e-181
Identity = 312/322 (96.89%), Postives = 318/322 (98.76%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60
           MGSRDLERGGAK   PPGNYSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK
Sbjct: 1   MGSRDLERGGAKTNKPPGNYSNSYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60

Query: 61  HYLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL 120
           H LGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL
Sbjct: 61  HSLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL 120

Query: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA 180
           HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA
Sbjct: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA 180

Query: 181 LFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGFLL 240
           LFGLLGAMLSELLTNWTIYTDKAAALITL+VIIVINLAVGILPHVDNFAHIGGFLTGFLL
Sbjct: 181 LFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFLTGFLL 240

Query: 241 GFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRGENG 300
           GF+LLLRPQFGW+ERRHLPA+SRAVPKHK+YQYILCFVALALLIVGFTIGLVMLFRGENG
Sbjct: 241 GFILLLRPQFGWIERRHLPANSRAVPKHKLYQYILCFVALALLIVGFTIGLVMLFRGENG 300

Query: 301 NNHCSWCHYLSCVPTSKWECGN 323
           NNHCSWCHYLSCVPTSKWECGN
Sbjct: 301 NNHCSWCHYLSCVPTSKWECGN 322

[Close]

BLAST of Cla001146 vs. TrEMBL
Match: W9SLC9_9ROSA (Rhomboid-like protein OS=Morus notabilis GN=L484_010562 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 9.5e-150
Identity = 262/325 (80.62%), Postives = 287/325 (88.31%), Query Frame = 1


Query: 1   MGSRDLERGGAKPIN--PPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNC 60
           M S+DLERGG K  N    GNYSN YY ETSE QWTSWLVPMFVVAN+A+FIV MY+NNC
Sbjct: 1   MASQDLERGGTKSRNNYASGNYSNPYYVETSEHQWTSWLVPMFVVANIAVFIVAMYINNC 60

Query: 61  PKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITG 120
           PK+  G E +CVA+FLGR SF+PL+ NPLFGPSSSTL+KLGALEW K+V  +Q WRLIT 
Sbjct: 61  PKNNSGFEGDCVAKFLGRLSFQPLKENPLFGPSSSTLEKLGALEWRKVVDRNQGWRLITC 120

Query: 121 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGA 180
           IWLHAGVIHLLANMLSLVFIGIRLEQQFGF+RVG++YL+SGLGGSILSSLFIQ NISVGA
Sbjct: 121 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGLIYLISGLGGSILSSLFIQRNISVGA 180

Query: 181 SGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTG 240
           SGALFGLLGAMLSELLTNWTIYT+KAAAL TL+VII INLAVGILPHVDNFAHIGGFLTG
Sbjct: 181 SGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIAINLAVGILPHVDNFAHIGGFLTG 240

Query: 241 FLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRG 300
           FLLGFVLL+RPQFG++E RH PA+S    KHK YQYIL   A+ALLIVGFT+GLVMLF+G
Sbjct: 241 FLLGFVLLIRPQFGYIESRHHPANSHVKSKHKAYQYILLLAAVALLIVGFTLGLVMLFKG 300

Query: 301 ENGNNHCSWCHYLSCVPTSKWECGN 323
           ENGN HCSWCHYLSCVPTSKW CGN
Sbjct: 301 ENGNKHCSWCHYLSCVPTSKWRCGN 325

[Close]

BLAST of Cla001146 vs. TrEMBL
Match: A0A0D2QLQ4_GOSRA (Rhomboid-like protein OS=Gossypium raimondii GN=B456_003G161200 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 1.2e-149
Identity = 260/328 (79.27%), Postives = 290/328 (88.41%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNY-----SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYV 60
           M S DLERGG   +   GN      S++YY E +EKQWTSWLVPMFVVANVA+F+VVMYV
Sbjct: 1   MASGDLERGGGSNVKNRGNSYNQSSSSSYYVENNEKQWTSWLVPMFVVANVAVFVVVMYV 60

Query: 61  NNCPKHYLGSEE-CVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRL 120
           NNCP++  G E  CVARFLGR SFEPL+ NPLFGPSS+TL+KLGAL W+K+VHG+QAWRL
Sbjct: 61  NNCPRNNQGFEGGCVARFLGRLSFEPLKENPLFGPSSNTLEKLGALNWDKVVHGNQAWRL 120

Query: 121 ITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNIS 180
           IT IWLHAGVIHLLANMLSL+FIGIRLEQQFGFIRVG++YLLSG GGS+LSSLFIQ +IS
Sbjct: 121 ITCIWLHAGVIHLLANMLSLIFIGIRLEQQFGFIRVGLIYLLSGFGGSVLSSLFIQRSIS 180

Query: 181 VGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGF 240
           VGASGALFGLLGAMLSELLTNWTIYT+KAAALITL+VIIVINLAVGILPHVDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLTNWTIYTNKAAALITLMVIIVINLAVGILPHVDNFAHIGGF 240

Query: 241 LTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVML 300
           LTGFLLGFVLLLRPQFGW+ R+HLPA +R   KHK YQY+   +A+ LLIVGFT+GLVML
Sbjct: 241 LTGFLLGFVLLLRPQFGWVGRKHLPAGARVTSKHKAYQYLFLVIAMVLLIVGFTVGLVML 300

Query: 301 FRGENGNNHCSWCHYLSCVPTSKWECGN 323
           FRGENG++HCSWCHYLSCVPTSKW CGN
Sbjct: 301 FRGENGHDHCSWCHYLSCVPTSKWHCGN 328

[Close]

BLAST of Cla001146 vs. TrEMBL
Match: A0A0B0N043_GOSAR (Rhomboid-like protein OS=Gossypium arboreum GN=F383_34628 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.6e-149
Identity = 260/328 (79.27%), Postives = 288/328 (87.80%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNY-----SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYV 60
           M S DLERGG   +   GN      S++YY E +EKQWTSWLVPMFVVAN+A+F+VVMYV
Sbjct: 1   MASGDLERGGGSNVKNRGNSYNQSSSSSYYVENNEKQWTSWLVPMFVVANIAVFVVVMYV 60

Query: 61  NNCPKHYLGSEE-CVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRL 120
           NNCPK+  G E  CVARFLGR SFEPL+ NPLFGPSS+TL+KLGAL WEK+VHG+QAWRL
Sbjct: 61  NNCPKNNQGFEGGCVARFLGRLSFEPLKENPLFGPSSNTLEKLGALNWEKVVHGNQAWRL 120

Query: 121 ITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNIS 180
           IT IWLHAGVIHLLANMLSL+FIGIRLEQQFGFIRVG++YLLSG GGS+LSSLFIQ +IS
Sbjct: 121 ITSIWLHAGVIHLLANMLSLIFIGIRLEQQFGFIRVGLIYLLSGFGGSVLSSLFIQRSIS 180

Query: 181 VGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGF 240
           VGASGALFGLLGAMLSELLTNWTIYT+KAAALITLVVIIVINLAVGILPHVDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLTNWTIYTNKAAALITLVVIIVINLAVGILPHVDNFAHIGGF 240

Query: 241 LTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVML 300
           LTGFLLGFVLLLRPQFGW+ R+ LPA +R   KHK YQY+   +A+ LLI GFT+GLVML
Sbjct: 241 LTGFLLGFVLLLRPQFGWVGRKQLPAGARVTSKHKAYQYLFLVIAMVLLIAGFTVGLVML 300

Query: 301 FRGENGNNHCSWCHYLSCVPTSKWECGN 323
           FRGENG++HCSWCHYLSCVPTSKW CGN
Sbjct: 301 FRGENGHDHCSWCHYLSCVPTSKWHCGN 328

[Close]

BLAST of Cla001146 vs. TrEMBL
Match: A0A061G502_THECC (Rhomboid-like protein OS=Theobroma cacao GN=TCM_016192 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 6.2e-149
Identity = 260/329 (79.03%), Postives = 287/329 (87.23%), Query Frame = 1


Query: 1   MGSRDLERGG-AKPINPPGNY-----SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMY 60
           M S DLERGG +   N   NY     +  YY E++EKQWTSWLVPMFVVANVA+F+VVMY
Sbjct: 1   MASGDLERGGGSNGKNRANNYYQSASTGPYYMESAEKQWTSWLVPMFVVANVAVFVVVMY 60

Query: 61  VNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWR 120
           +NNCPK+ LG E  CVA+FLGR SF+PL+ NPLFGPSS+TL+KLGALEW K+VHG Q WR
Sbjct: 61  INNCPKNNLGIEGSCVAKFLGRLSFQPLKENPLFGPSSNTLEKLGALEWNKVVHGDQGWR 120

Query: 121 LITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNI 180
           LIT IWLHAGVIHLLANMLSLVFIGIRLEQQFGF+RVG++YLLSG GGSILSSLFIQ NI
Sbjct: 121 LITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGLIYLLSGFGGSILSSLFIQRNI 180

Query: 181 SVGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGG 240
           SVGASGALFGLLGAMLSELLTNWTIYT+KAAALITLV+II INLAVGILPHVDNFAHIGG
Sbjct: 181 SVGASGALFGLLGAMLSELLTNWTIYTNKAAALITLVIIIAINLAVGILPHVDNFAHIGG 240

Query: 241 FLTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVM 300
           F  GFLLGFVLLLRPQFGW+ER+HLPA +R   KHK YQY+   +A+ LLIVGFT+GLVM
Sbjct: 241 FFAGFLLGFVLLLRPQFGWVERQHLPAGARVKSKHKAYQYVFWVIAVVLLIVGFTVGLVM 300

Query: 301 LFRGENGNNHCSWCHYLSCVPTSKWECGN 323
           LFRGENGN+HCSWCHYLSCVPTSKW CGN
Sbjct: 301 LFRGENGNDHCSWCHYLSCVPTSKWRCGN 329

[Close]

BLAST of Cla001146 vs. NCBI nr
Match: gi|449460471|ref|XP_004147969.1| (PREDICTED: inactive rhomboid protein 1 [Cucumis sativus])

HSP 1 Score: 643.7 bits (1659), Expect = 1.8e-181
Identity = 312/322 (96.89%), Postives = 318/322 (98.76%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60
           MGSRDLERGGAK   PPGNYSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK
Sbjct: 1   MGSRDLERGGAKTNKPPGNYSNSYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60

Query: 61  HYLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL 120
           H LGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL
Sbjct: 61  HSLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL 120

Query: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA 180
           HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA
Sbjct: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA 180

Query: 181 LFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGFLL 240
           LFGLLGAMLSELLTNWTIYTDKAAALITL+VIIVINLAVGILPHVDNFAHIGGFLTGFLL
Sbjct: 181 LFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFLTGFLL 240

Query: 241 GFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRGENG 300
           GF+LLLRPQFGW+ERRHLPA+SRAVPKHK+YQYILCFVALALLIVGFTIGLVMLFRGENG
Sbjct: 241 GFILLLRPQFGWIERRHLPANSRAVPKHKLYQYILCFVALALLIVGFTIGLVMLFRGENG 300

Query: 301 NNHCSWCHYLSCVPTSKWECGN 323
           NNHCSWCHYLSCVPTSKWECGN
Sbjct: 301 NNHCSWCHYLSCVPTSKWECGN 322

[Close]

BLAST of Cla001146 vs. NCBI nr
Match: gi|659096163|ref|XP_008448955.1| (PREDICTED: inactive rhomboid protein 1 [Cucumis melo])

HSP 1 Score: 639.0 bits (1647), Expect = 4.3e-180
Identity = 311/322 (96.58%), Postives = 317/322 (98.45%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60
           MGSRDLERGGAK  N PG YSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK
Sbjct: 1   MGSRDLERGGAKTNNAPGYYSNSYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60

Query: 61  HYLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL 120
           H LGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL
Sbjct: 61  HNLGSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWL 120

Query: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA 180
           HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA
Sbjct: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGA 180

Query: 181 LFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGFLL 240
           LFGLLGAMLSELLTNWTIYTDKAAALITL+VIIVINLAVGILPHVDNFAHIGGFLTGFLL
Sbjct: 181 LFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFLTGFLL 240

Query: 241 GFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRGENG 300
           GFVLLLRPQFGW+ERRHLPA+SRAVPKHK+YQYILCFVALALLIVGFT+GLVMLFRGENG
Sbjct: 241 GFVLLLRPQFGWIERRHLPANSRAVPKHKLYQYILCFVALALLIVGFTMGLVMLFRGENG 300

Query: 301 NNHCSWCHYLSCVPTSKWECGN 323
           NNHCSWCHYLSCVPTSKWECGN
Sbjct: 301 NNHCSWCHYLSCVPTSKWECGN 322

[Close]

BLAST of Cla001146 vs. NCBI nr
Match: gi|703160534|ref|XP_010112557.1| (Inactive rhomboid protein 1 [Morus notabilis])

HSP 1 Score: 537.7 bits (1384), Expect = 1.4e-149
Identity = 262/325 (80.62%), Postives = 287/325 (88.31%), Query Frame = 1


Query: 1   MGSRDLERGGAKPIN--PPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNC 60
           M S+DLERGG K  N    GNYSN YY ETSE QWTSWLVPMFVVAN+A+FIV MY+NNC
Sbjct: 1   MASQDLERGGTKSRNNYASGNYSNPYYVETSEHQWTSWLVPMFVVANIAVFIVAMYINNC 60

Query: 61  PKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITG 120
           PK+  G E +CVA+FLGR SF+PL+ NPLFGPSSSTL+KLGALEW K+V  +Q WRLIT 
Sbjct: 61  PKNNSGFEGDCVAKFLGRLSFQPLKENPLFGPSSSTLEKLGALEWRKVVDRNQGWRLITC 120

Query: 121 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGA 180
           IWLHAGVIHLLANMLSLVFIGIRLEQQFGF+RVG++YL+SGLGGSILSSLFIQ NISVGA
Sbjct: 121 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGLIYLISGLGGSILSSLFIQRNISVGA 180

Query: 181 SGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTG 240
           SGALFGLLGAMLSELLTNWTIYT+KAAAL TL+VII INLAVGILPHVDNFAHIGGFLTG
Sbjct: 181 SGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIAINLAVGILPHVDNFAHIGGFLTG 240

Query: 241 FLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVMLFRG 300
           FLLGFVLL+RPQFG++E RH PA+S    KHK YQYIL   A+ALLIVGFT+GLVMLF+G
Sbjct: 241 FLLGFVLLIRPQFGYIESRHHPANSHVKSKHKAYQYILLLAAVALLIVGFTLGLVMLFKG 300

Query: 301 ENGNNHCSWCHYLSCVPTSKWECGN 323
           ENGN HCSWCHYLSCVPTSKW CGN
Sbjct: 301 ENGNKHCSWCHYLSCVPTSKWRCGN 325

[Close]

BLAST of Cla001146 vs. NCBI nr
Match: gi|823144053|ref|XP_012471847.1| (PREDICTED: inactive rhomboid protein 1-like [Gossypium raimondii])

HSP 1 Score: 537.3 bits (1383), Expect = 1.8e-149
Identity = 260/328 (79.27%), Postives = 290/328 (88.41%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNY-----SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYV 60
           M S DLERGG   +   GN      S++YY E +EKQWTSWLVPMFVVANVA+F+VVMYV
Sbjct: 1   MASGDLERGGGSNVKNRGNSYNQSSSSSYYVENNEKQWTSWLVPMFVVANVAVFVVVMYV 60

Query: 61  NNCPKHYLGSEE-CVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRL 120
           NNCP++  G E  CVARFLGR SFEPL+ NPLFGPSS+TL+KLGAL W+K+VHG+QAWRL
Sbjct: 61  NNCPRNNQGFEGGCVARFLGRLSFEPLKENPLFGPSSNTLEKLGALNWDKVVHGNQAWRL 120

Query: 121 ITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNIS 180
           IT IWLHAGVIHLLANMLSL+FIGIRLEQQFGFIRVG++YLLSG GGS+LSSLFIQ +IS
Sbjct: 121 ITCIWLHAGVIHLLANMLSLIFIGIRLEQQFGFIRVGLIYLLSGFGGSVLSSLFIQRSIS 180

Query: 181 VGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGF 240
           VGASGALFGLLGAMLSELLTNWTIYT+KAAALITL+VIIVINLAVGILPHVDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLTNWTIYTNKAAALITLMVIIVINLAVGILPHVDNFAHIGGF 240

Query: 241 LTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVML 300
           LTGFLLGFVLLLRPQFGW+ R+HLPA +R   KHK YQY+   +A+ LLIVGFT+GLVML
Sbjct: 241 LTGFLLGFVLLLRPQFGWVGRKHLPAGARVTSKHKAYQYLFLVIAMVLLIVGFTVGLVML 300

Query: 301 FRGENGNNHCSWCHYLSCVPTSKWECGN 323
           FRGENG++HCSWCHYLSCVPTSKW CGN
Sbjct: 301 FRGENGHDHCSWCHYLSCVPTSKWHCGN 328

[Close]

BLAST of Cla001146 vs. NCBI nr
Match: gi|728828290|gb|KHG07733.1| (Rhomboid-like protease 3 [Gossypium arboreum])

HSP 1 Score: 537.0 bits (1382), Expect = 2.3e-149
Identity = 260/328 (79.27%), Postives = 288/328 (87.80%), Query Frame = 1


Query: 1   MGSRDLERGGAKPINPPGNY-----SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYV 60
           M S DLERGG   +   GN      S++YY E +EKQWTSWLVPMFVVAN+A+F+VVMYV
Sbjct: 1   MASGDLERGGGSNVKNRGNSYNQSSSSSYYVENNEKQWTSWLVPMFVVANIAVFVVVMYV 60

Query: 61  NNCPKHYLGSEE-CVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRL 120
           NNCPK+  G E  CVARFLGR SFEPL+ NPLFGPSS+TL+KLGAL WEK+VHG+QAWRL
Sbjct: 61  NNCPKNNQGFEGGCVARFLGRLSFEPLKENPLFGPSSNTLEKLGALNWEKVVHGNQAWRL 120

Query: 121 ITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNIS 180
           IT IWLHAGVIHLLANMLSL+FIGIRLEQQFGFIRVG++YLLSG GGS+LSSLFIQ +IS
Sbjct: 121 ITSIWLHAGVIHLLANMLSLIFIGIRLEQQFGFIRVGLIYLLSGFGGSVLSSLFIQRSIS 180

Query: 181 VGASGALFGLLGAMLSELLTNWTIYTDKAAALITLVVIIVINLAVGILPHVDNFAHIGGF 240
           VGASGALFGLLGAMLSELLTNWTIYT+KAAALITLVVIIVINLAVGILPHVDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLTNWTIYTNKAAALITLVVIIVINLAVGILPHVDNFAHIGGF 240

Query: 241 LTGFLLGFVLLLRPQFGWMERRHLPASSRAVPKHKVYQYILCFVALALLIVGFTIGLVML 300
           LTGFLLGFVLLLRPQFGW+ R+ LPA +R   KHK YQY+   +A+ LLI GFT+GLVML
Sbjct: 241 LTGFLLGFVLLLRPQFGWVGRKQLPAGARVTSKHKAYQYLFLVIAMVLLIAGFTVGLVML 300

Query: 301 FRGENGNNHCSWCHYLSCVPTSKWECGN 323
           FRGENG++HCSWCHYLSCVPTSKW CGN
Sbjct: 301 FRGENGHDHCSWCHYLSCVPTSKWHCGN 328

The following BLAST results are available for this feature:

BLAST of Cla001146 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL2_ARATH	2.4e-130	70.19	RHOMBOID-like protein 2 OS=Arabidopsis thaliana GN=RBL2 PE=1 SV=1	[more]
RBL3_ARATH	5.0e-128	66.77	RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1	[more]
RBL1_ARATH	1.1e-114	59.77	RHOMBOID-like protein 1 OS=Arabidopsis thaliana GN=RBL1 PE=2 SV=1	[more]
RBL6_ARATH	1.0e-112	60.87	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1	[more]
RBL4_ARATH	3.8e-107	61.03	RHOMBOID-like protein 4 OS=Arabidopsis thaliana GN=RBL4 PE=2 SV=1	[more]

BLAST of Cla001146 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1V2_CUCSA	1.2e-181	96.89	Rhomboid-like protein OS=Cucumis sativus GN=Csa_3G038720 PE=3 SV=1	[more]
W9SLC9_9ROSA	9.5e-150	80.62	Rhomboid-like protein OS=Morus notabilis GN=L484_010562 PE=3 SV=1	[more]
A0A0D2QLQ4_GOSRA	1.2e-149	79.27	Rhomboid-like protein OS=Gossypium raimondii GN=B456_003G161200 PE=3 SV=1	[more]
A0A0B0N043_GOSAR	1.6e-149	79.27	Rhomboid-like protein OS=Gossypium arboreum GN=F383_34628 PE=3 SV=1	[more]
A0A061G502_THECC	6.2e-149	79.03	Rhomboid-like protein OS=Theobroma cacao GN=TCM_016192 PE=3 SV=1	[more]

BLAST of Cla001146 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460471\|ref\|XP_004147969.1\|	1.8e-181	96.89	PREDICTED: inactive rhomboid protein 1 [Cucumis sativus]	[more]
gi\|659096163\|ref\|XP_008448955.1\|	4.3e-180	96.58	PREDICTED: inactive rhomboid protein 1 [Cucumis melo]	[more]
gi\|703160534\|ref\|XP_010112557.1\|	1.4e-149	80.62	Inactive rhomboid protein 1 [Morus notabilis]	[more]
gi\|823144053\|ref\|XP_012471847.1\|	1.8e-149	79.27	PREDICTED: inactive rhomboid protein 1-like [Gossypium raimondii]	[more]
gi\|728828290\|gb\|KHG07733.1\|	2.3e-149	79.27	Rhomboid-like protease 3 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0016485	protein processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008233	peptidase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08562	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001146	Cla001146.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU08562	WMU08562	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 4..322 score: 9.6E
IPR022764	Peptidase S54, rhomboid domain	GENE3D	G3DSA:1.20.1540.10		coord: 92..245 score: 6.4E-56coord: 34..57 score: 6.4
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 106..248 score: 1.9
None	No IPR available	PANTHER	PTHR22936:SF35	MEMBRANE PROTEIN-RELATED	coord: 4..322 score: 9.6E
None	No IPR available	unknown	SSF144091	Rhomboid-like	coord: 32..59 score: 5.1E-43coord: 94..249 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001146	Cla97C10G188050	Watermelon (97103) v2	wmwmbB058
Cla001146	Csa3G038720	Cucumber (Chinese Long) v2	cuwmB202
Cla001146	MELO3C014019	Melon (DHL92) v3.5.1	mewmB449
Cla001146	ClCG10G003510	Watermelon (Charleston Gray)	wcgwmB058
Cla001146	ClCG00G000250	Watermelon (Charleston Gray)	wcgwmB001
Cla001146	CSPI03G03460	Wild cucumber (PI 183967)	cpiwmB202
Cla001146	Cucsa.320150	Cucumber (Gy14) v1	cgywmB584
Cla001146	CmaCh16G010210	Cucurbita maxima (Rimu)	cmawmB297
Cla001146	CmoCh16G010610	Cucurbita moschata (Rifu)	cmowmB291
Cla001146	Lsi07G013820	Bottle gourd (USVL1VR-Ls)	lsiwmB431
Cla001146	Cp4.1LG14g08280	Cucurbita pepo (Zucchini)	cpewmB207
Cla001146	CsGy3G003440	Cucumber (Gy14) v2	cgybwmB190
Cla001146	MELO3C014019.2	Melon (DHL92) v3.6.1	medwmB440
Cla001146	CsaV3_3G003520	Cucumber (Chinese Long) v3	cucwmB211
Cla001146	Bhi11G000291	Wax gourd	wgowmB032

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001146	Cucurbita pepo (Zucchini)	cpewmB169
Cla001146	Cucurbita pepo (Zucchini)	cpewmB828
Cla001146	Cucurbita pepo (Zucchini)	cpewmB835
Cla001146	Bottle gourd (USVL1VR-Ls)	lsiwmB008
Cla001146	Bottle gourd (USVL1VR-Ls)	lsiwmB428
Cla001146	Cucumber (Gy14) v2	cgybwmB184
Cla001146	Cucumber (Gy14) v2	cgybwmB348
Cla001146	Melon (DHL92) v3.6.1	medwmB004
Cla001146	Melon (DHL92) v3.6.1	medwmB433
Cla001146	Silver-seed gourd	carwmB0862
Cla001146	Silver-seed gourd	carwmB0865
Cla001146	Silver-seed gourd	carwmB0866
Cla001146	Cucumber (Chinese Long) v3	cucwmB205
Cla001146	Cucumber (Chinese Long) v3	cucwmB398
Cla001146	Watermelon (97103) v2	wmwmbB050
Cla001146	Watermelon (97103) v2	wmwmbB053
Cla001146	Wax gourd	wgowmB057
Cla001146	Wax gourd	wgowmB163
Cla001146	Watermelon (97103) v1	wmwmB049
Cla001146	Cucumber (Gy14) v1	cgywmB547
Cla001146	Cucumber (Gy14) v1	cgywmB585
Cla001146	Cucurbita maxima (Rimu)	cmawmB254
Cla001146	Cucurbita maxima (Rimu)	cmawmB785
Cla001146	Cucurbita maxima (Rimu)	cmawmB790
Cla001146	Cucurbita moschata (Rifu)	cmowmB245
Cla001146	Cucurbita moschata (Rifu)	cmowmB778
Cla001146	Cucurbita moschata (Rifu)	cmowmB784
Cla001146	Wild cucumber (PI 183967)	cpiwmB195
Cla001146	Wild cucumber (PI 183967)	cpiwmB381
Cla001146	Melon (DHL92) v3.5.1	mewmB006
Cla001146	Watermelon (Charleston Gray)	wcgwmB053
Cla001146	Watermelon (Charleston Gray)	wcgwmB119
Cla001146	Cucumber (Chinese Long) v2	cuwmB195
Cla001146	Cucumber (Chinese Long) v2	cuwmB375