Cla001069 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CATCCAAGTGCAAAAGGACTGCGCCATAAGTCATTTCCATACTATGATTTCTTGGCTATCGTATTTGGCAAAGACAGAGCCACATGGAGTCATGCAACCACCACTGCAGAGGTCGGATCTGAACCTGTTATGGAAGAGGAAAACAAGGACATCCTGAACAACCAGTCCCCAGACTTTGAGAACTTCTATATTCTTGATCCACCTTTTGCTAGCTCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTAGAGGGAGAGGGTCTGGGAGTAGCTTGCCATCAAGGAGTAGGAAGTCCCAAAGTTCATCGATTGGAGAGTACAGCGAGATGGTTTGTGAGGGATTCCAACTTCTGACGAAGTTTATTGACGGCATTGCACAGTGGCCTGTTATGAACGAGGACCTGGCAAGGCGTCGTCATCGAAAACTATACGCTGAGCTGCAATCCATTCCTGGTCTGTCGGTACAGGATGGATTGACTGTTGCACGATCATTGCTTGCAGATCCAATGCTGTTAAGCCACTTTGTGGACTTTCCACCACAGTGGAAGTACGACTATTGCATGCAAGTCCTCGGGCGACAACGGGATCCAGCACCATGA CATCCAAGTGCAAAAGGACTGCGCCATAAGTCATTTCCATACTATGATTTCTTGGCTATCGTATTTGGCAAAGACAGAGCCACATGGAGTCATGCAACCACCACTGCAGAGGTCGGATCTGAACCTGTTATGGAAGAGGAAAACAAGGACATCCTGAACAACCAGTCCCCAGACTTTGAGAACTTCTATATTCTTGATCCACCTTTTGCTAGCTCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTAGAGGGAGAGGGTCTGGGAGTAGCTTGCCATCAAGGAGTAGGAAGTCCCAAAGTTCATCGATTGGAGAGTACAGCGAGATGGTTTGTGAGGGATTCCAACTTCTGACGAAGTTTATTGACGGCATTGCACAGTGGCCTGTTATGAACGAGGACCTGGCAAGGCGTCGTCATCGAAAACTATACGCTGAGCTGCAATCCATTCCTGGTCTGTCGGTACAGGATGGATTGACTGTTGCACGATCATTGCTTGCAGATCCAATGCTGTTAAGCCACTTTGTGGACTTTCCACCACAGTGGAAGTACGACTATTGCATGCAAGTCCTCGGGCGACAACGGGATCCAGCACCATGA CATCCAAGTGCAAAAGGACTGCGCCATAAGTCATTTCCATACTATGATTTCTTGGCTATCGTATTTGGCAAAGACAGAGCCACATGGAGTCATGCAACCACCACTGCAGAGGTCGGATCTGAACCTGTTATGGAAGAGGAAAACAAGGACATCCTGAACAACCAGTCCCCAGACTTTGAGAACTTCTATATTCTTGATCCACCTTTTGCTAGCTCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTAGAGGGAGAGGGTCTGGGAGTAGCTTGCCATCAAGGAGTAGGAAGTCCCAAAGTTCATCGATTGGAGAGTACAGCGAGATGGTTTGTGAGGGATTCCAACTTCTGACGAAGTTTATTGACGGCATTGCACAGTGGCCTGTTATGAACGAGGACCTGGCAAGGCGTCGTCATCGAAAACTATACGCTGAGCTGCAATCCATTCCTGGTCTGTCGGTACAGGATGGATTGACTGTTGCACGATCATTGCTTGCAGATCCAATGCTGTTAAGCCACTTTGTGGACTTTCCACCACAGTGGAAGTACGACTATTGCATGCAAGTCCTCGGGCGACAACGGGATCCAGCACCATGA HPSAKGLRHKSFPYYDFLAIVFGKDRATWSHATTTAEVGSEPVMEEENKDILNNQSPDFENFYILDPPFASSPXXXXXXXXXXXXXGRGRGSGSSLPSRSRKSQSSSIGEYSEMVCEGFQLLTKFIDGIAQWPVMNEDLARRRHRKLYAELQSIPGLSVQDGLTVARSLLADPMLLSHFVDFPPQWKYDYCMQVLGRQRDPAP
BLAST of Cla001069 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.0e-13 Identity = 58/197 (29.44%), Postives = 94/197 (47.72%), Query Frame = 1
BLAST of Cla001069 vs. TrEMBL
Match: A0A0A0M0S6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-08 Identity = 56/183 (30.60%), Postives = 77/183 (42.08%), Query Frame = 1
BLAST of Cla001069 vs. TrEMBL
Match: A0A0J8FY72_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g005680 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.6e-07 Identity = 54/198 (27.27%), Postives = 88/198 (44.44%), Query Frame = 1
BLAST of Cla001069 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06 Identity = 56/196 (28.57%), Postives = 83/196 (42.35%), Query Frame = 1
BLAST of Cla001069 vs. TrEMBL
Match: A0A0J8BIR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018220 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06 Identity = 53/198 (26.77%), Postives = 88/198 (44.44%), Query Frame = 1
BLAST of Cla001069 vs. NCBI nr
Match: gi|659071532|ref|XP_008460440.1| (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]) HSP 1 Score: 105.9 bits (263), Expect = 8.4e-20 Identity = 70/192 (36.46%), Postives = 102/192 (53.12%), Query Frame = 1
BLAST of Cla001069 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 83.2 bits (204), Expect = 5.8e-13 Identity = 58/197 (29.44%), Postives = 94/197 (47.72%), Query Frame = 1
BLAST of Cla001069 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 77.0 bits (188), Expect = 4.2e-11 Identity = 54/191 (28.27%), Postives = 81/191 (42.41%), Query Frame = 1
BLAST of Cla001069 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo]) HSP 1 Score: 74.3 bits (181), Expect = 2.7e-10 Identity = 59/203 (29.06%), Postives = 84/203 (41.38%), Query Frame = 1
BLAST of Cla001069 vs. NCBI nr
Match: gi|659123900|ref|XP_008461893.1| (PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo]) HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09 Identity = 54/199 (27.14%), Postives = 91/199 (45.73%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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