Cla001063 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGGAGACATTAAAATTTTGAAAGAGAGTTTCACTACACCACTTACCAAGATGGATAAGAGTGGCGTTAAAAAAACTGAGACAGAGGAAGCTAGAGCAACTCTGCTAGAAAAACGAACAAAGGATGGTTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGACTTCACTACTCATTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGACTTCACTACTCATTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGATTTCACGACTCATACTGAGTTTAAAACTCTAAAGATATCTGATGAAAGACCTAAACTTTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGATATACTATCCCTTATTCAAGGGCCAGACTTGCATATAATCCCCGGAGCCGATTCATATAA ATGATCGGAGACATTAAAATTTTGAAAGAGAGTTTCACTACACCACTTACCAAGATGGATAAGAGTGGCGTTAAAAAAACTGAGACAGAGGAAGCTAGAGCAACTCTGCTAGAAAAACGAACAAAGGATGGTTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGACTTCACTACTCATTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGACTTCACTACTCATTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGATTTCACGACTCATACTGAGTTTAAAACTCTAAAGATATCTGATGAAAGACCTAAACTTTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGATATACTATCCCTTATTCAAGGGCCAGACTTGCATATAATCCCCGGAGCCGATTCATATAA ATGATCGGAGACATTAAAATTTTGAAAGAGAGTTTCACTACACCACTTACCAAGATGGATAAGAGTGGCGTTAAAAAAACTGAGACAGAGGAAGCTAGAGCAACTCTGCTAGAAAAACGAACAAAGGATGGTTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGACTTCACTACTCATTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGACTTCACTACTCATTTCGATCCAAAGGCATATAAGCTACTGGCAAAGGCAGGTTATGATTTCACGACTCATACTGAGTTTAAAACTCTAAAGATATCTGATGAAAGACCTAAACTTTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGATATACTATCCCTTATTCAAGGGCCAGACTTGCATATAATCCCCGGAGCCGATTCATATAA MIGDIKILKESFTTPLTKMDKSGVKKTETEEARATLLEKRTKDGFDPKAYKLLAKAGYDFTTHFDPKAYKLLAKAGYDFTTHFDPKAYKLLAKAGYDFTTHTEFKTLKISDERPKLSPTQRKLQKEGYTIPYSRARLAYNPRSRFI
BLAST of Cla001063 vs. TrEMBL
Match: B0F6T3_CUCSA (Gypsy-like retrotransposase OS=Cucumis sativus PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 1
BLAST of Cla001063 vs. NCBI nr
Match: gi|778660504|ref|XP_011656345.1| (PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18 Identity = 65/138 (47.10%), Postives = 79/138 (57.25%), Query Frame = 1
BLAST of Cla001063 vs. NCBI nr
Match: gi|659124357|ref|XP_008462116.1| (PREDICTED: uncharacterized protein LOC103500544 [Cucumis melo]) HSP 1 Score: 93.2 bits (230), Expect = 4.0e-16 Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 1
BLAST of Cla001063 vs. NCBI nr
Match: gi|659124357|ref|XP_008462116.1| (PREDICTED: uncharacterized protein LOC103500544 [Cucumis melo]) HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13 Identity = 50/115 (43.48%), Postives = 63/115 (54.78%), Query Frame = 1
HSP 2 Score: 91.3 bits (225), Expect = 1.5e-15 Identity = 42/66 (63.64%), Postives = 57/66 (86.36%), Query Frame = 1
BLAST of Cla001063 vs. NCBI nr
Match: gi|659113191|ref|XP_008456446.1| (PREDICTED: uncharacterized protein LOC103496389 [Cucumis melo]) HSP 1 Score: 79.7 bits (195), Expect = 4.6e-12 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
HSP 2 Score: 49.7 bits (117), Expect = 5.1e-03 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1
HSP 3 Score: 80.5 bits (197), Expect = 2.7e-12 Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of Cla001063 vs. NCBI nr
Match: gi|659099164|ref|XP_008450461.1| (PREDICTED: uncharacterized protein LOC103492056 [Cucumis melo]) HSP 1 Score: 68.9 bits (167), Expect = 8.1e-09 Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 1
HSP 2 Score: 52.0 bits (123), Expect = 1.0e-03 Identity = 35/105 (33.33%), Postives = 48/105 (45.71%), Query Frame = 1
HSP 3 Score: 76.3 bits (186), Expect = 5.1e-11 Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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