Cla001025 (gene) Watermelon (97103) v1

Overview
NameCla001025
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTubulin-specific chaperone E (AHRD V1 *--- F4WHJ2_ACREC); contains Interpro domain(s) IPR000938 Cytoskeleton-associated protein, CAP-Gly
LocationChr3 : 21775667 .. 21777538 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGGCTCAATTCAGCTTCAGTCCGAGTTTAGGCTCGGCCAACGAGTCCACTTTGTCGGTGACCCCCGACGTACTGGAACTGTGGCTTTCATAGGAACCCTAGAGGGATATTCAGGAACTTGGATCGGAGTGGATTGGGATGACAACAATGGCAAGCATGATGGTTCCATCAATGGGGTCCGATATTTCCAGGCAAAGTCAGAACGATCTGGTTCTTTCGTTCGGGTCCAGAATCTGAGTTTTGGCATTTCACTGCTCCAAGCATTGGACCTCAGATATAGAGGTGACTCTACGAAAGAAGAAGAGGGTATGTATCTCTGCTATCAATTCATGTCTAGTTGCTCCTAACATGGCTGGCTAATTATGGTATATCGTTAATGTAATCTTGCTGCTTAAACTCAAAATTTATTTTGATCATTTATTGGAAAAAATGCATCGGTACATTTACTAAGAACAAACTGCACTGTTGTTCAATGTGTAGTTAGTTGTTTTGGTACTTAACTACTTGTTCATATTTCCACATGAACCTTGGGTATATTTAATATTTAATATAATTCAATGGTTGCTCTAAATTTCTTGTTATGGCTTGTTCTGCATTTCTATTTGCTCTTTTGCAGATGAAATGTATGTACTCTCAGCCAGTGACAAGCGTGTATCTGTTCAGTTTGTGGGTAAAGATCTTATTAAAGACAAGCTTAGTCGTTTTGAGGAGTTAACTAGTGTATCATTGTCATACATGGGTGTTAGCTCTCTCGGGAATCCAAGTCAGATTGGCTCTGTCTTGCCAAGTAAGTCTCTTGACCTCAATGAAGTTCACATTTGTCTTCTTTACTGATTCAAATAGTTTGTTGATTTTCAAAATGTTGTTAATATGCAGACATGCCCCTTGTGCATTTTTTTGTCGTCATTTTTTTAACAAAAAACATTGTATTAAACCATAGTAACAAAAGACTATGCTCATACATTTGGAGTTGAAGCTTCTTGGTGGAGGGTACAGCTCTGTTTTTCTCTTGGGTAAAAATGCACCGGTTACAACTTCTTCGTGGTTTGCTCTACACAATTCCTTTTGTAATACACATTGCTATACGAACAATTTAGATTGGAGGTCTTTTGCTGTTAACTCTTTGATTTATGCTTCAGGGCCTCTCATCCTTAAGGCCTTAGGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAATTAACTCTTTGATTTATGCTTCAGGGCCTCTCATCCTTAAGGCCTTAGGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTAAAGAAGACATTTGGAATTTTGGTCATACACTAACAACATTAGCTAGAGAAGCACAAAAACAAATGGCAGCTTATCTCTCTCCTCCCTTCCCCTCCCCAATCCTCTCCGATCAACTCTGATTTGAACCCCACCTTTTTTCGATCATCTACGATTCACCCCTGACTTCATCCCCATCCCTGGCCATCCCTCAAGTTAATCCTCAGCTTCTCAGTTTCGAGTTGGACACCTGGAAATTTAGACATGGAAGTCAAGAGCTGTAGAATTGATGACTTCTTCTTTTGTGCTTGGAAAGAAGGGCTAGGTTTTTACGTTGAAGATTTCAGCCGAAAGTTTAAAGTGCTGCTCTCCTCTGAAATGATAAGATGGTTTGGAGACTCTTTGAGACTCCTGGTGGCCTCACCCTTTTACTGCTTCTCAAGGAAATCAAGTGTTGATCATGGAGTGTTATGTCTTGCTAAGTTCAAGTCAGCTAAAGAATGGTTGGTTGAATGTGTAATATGGCCTCCTCGGGTGGACAGACAAATATTCATGTTCCTTAAGTAA

mRNA sequence

ATGCAAGGCTCAATTCAGCTTCAGTCCGAGTTTAGGCTCGGCCAACGAGTCCACTTTGTCGGTGACCCCCGACGTACTGGAACTGTGGCTTTCATAGGAACCCTAGAGGGATATTCAGGAACTTGGATCGGAGTGGATTGGGATGACAACAATGGCAAGCATGATGGTTCCATCAATGGGGTCCGATATTTCCAGGCAAAGTCAGAACGATCTGGTTCTTTCGTTCGGGTCCAGAATCTGAGTTTTGGCATTTCACTGCTCCAAGCATTGGACCTCAGATATAGAGGTGACTCTACGAAAGAAGAAGAGGATGAAATGTATGTACTCTCAGCCAGTGACAAGCGTGTATCTGTTCAGTTTGTGGGTAAAGATCTTATTAAAGACAAGCTTAGTCGTTTTGAGGAGTTAACTAGTGTATCATTGTCATACATGGGTGTTAGCTCTCTCGGGAATCCAAGTCAGATTGGCTCTGTCTTGCCAATTTCGAGTTGGACACCTGGAAATTTAGACATGGAAGTCAAGAGCTGTAGAATTGATGACTTCTTCTTTTGTGCTTGGAAAGAAGGGCTAGGTTTTTACGTTGAAGATTTCAGCCGAAAGTTTAAAGTGCTGCTCTCCTCTGAAATGATAAGATGGTTTGGAGACTCTTTGAGACTCCTGGTGGCCTCACCCTTTTACTGCTTCTCAAGGAAATCAAGTGTTGATCATGGAGTGTTATGTCTTGCTAAGTTCAAGTCAGCTAAAGAATGGTTGGTTGAATGTGTAATATGGCCTCCTCGGGTGGACAGACAAATATTCATGTTCCTTAAGTAA

Coding sequence (CDS)

ATGCAAGGCTCAATTCAGCTTCAGTCCGAGTTTAGGCTCGGCCAACGAGTCCACTTTGTCGGTGACCCCCGACGTACTGGAACTGTGGCTTTCATAGGAACCCTAGAGGGATATTCAGGAACTTGGATCGGAGTGGATTGGGATGACAACAATGGCAAGCATGATGGTTCCATCAATGGGGTCCGATATTTCCAGGCAAAGTCAGAACGATCTGGTTCTTTCGTTCGGGTCCAGAATCTGAGTTTTGGCATTTCACTGCTCCAAGCATTGGACCTCAGATATAGAGGTGACTCTACGAAAGAAGAAGAGGATGAAATGTATGTACTCTCAGCCAGTGACAAGCGTGTATCTGTTCAGTTTGTGGGTAAAGATCTTATTAAAGACAAGCTTAGTCGTTTTGAGGAGTTAACTAGTGTATCATTGTCATACATGGGTGTTAGCTCTCTCGGGAATCCAAGTCAGATTGGCTCTGTCTTGCCAATTTCGAGTTGGACACCTGGAAATTTAGACATGGAAGTCAAGAGCTGTAGAATTGATGACTTCTTCTTTTGTGCTTGGAAAGAAGGGCTAGGTTTTTACGTTGAAGATTTCAGCCGAAAGTTTAAAGTGCTGCTCTCCTCTGAAATGATAAGATGGTTTGGAGACTCTTTGAGACTCCTGGTGGCCTCACCCTTTTACTGCTTCTCAAGGAAATCAAGTGTTGATCATGGAGTGTTATGTCTTGCTAAGTTCAAGTCAGCTAAAGAATGGTTGGTTGAATGTGTAATATGGCCTCCTCGGGTGGACAGACAAATATTCATGTTCCTTAAGTAA

Protein sequence

MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSINGVRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLPISSWTPGNLDMEVKSCRIDDFFFCAWKEGLGFYVEDFSRKFKVLLSSEMIRWFGDSLRLLVASPFYCFSRKSSVDHGVLCLAKFKSAKEWLVECVIWPPRVDRQIFMFLK
Homology
[Close]
BLAST of Cla001025 vs. Swiss-Prot
Match: TBCE_ARATH (Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-53
Identity = 104/151 (68.87%), Postives = 123/151 (81.46%), Query Frame = 1 

Query: 11  FRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWD-DNNGKHDGSINGVRYFQAKSE 70
           F +GQRVH + D RR GTV ++G +EGYSGTWIGVDWD D +GKH+GS+NGV YF  +S+
Sbjct: 10  FIIGQRVHSLNDSRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFYFNGRSQ 69

Query: 71  RSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIKDK 130
            S SFVR QNLS GI+LLQAL+LRYR  STK+EEDEMYVLSA ++RVS+Q +G D I+DK
Sbjct: 70  SSASFVRSQNLSRGITLLQALELRYRTISTKDEEDEMYVLSAGNRRVSIQLLGGDKIQDK 129

Query: 131 LSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           LSRFEELTS SLSY+GVSSLG  S +GS+LP
Sbjct: 130 LSRFEELTSASLSYLGVSSLGVSSDLGSILP 160

[Close]
BLAST of Cla001025 vs. Swiss-Prot
Match: TBCE_BOVIN (Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 60/198 (30.30%), Postives = 94/198 (47.47%), Query Frame = 1 

Query: 13  LGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDD-NNGKHDGSINGVRYFQAKSERS 72
           +G+RV   G+     TV F G +   +G W+GV+WD+   GKHDGS  G  YF+ +   +
Sbjct: 10  IGRRVEVNGEH---ATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 69

Query: 73  GSFVRVQNLSFGISLLQALDLRY-RGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIKDKL 132
           GSF+R   ++FG+  L A+  RY   D  KEEE E  V+  +     V+ +G D +  + 
Sbjct: 70  GSFIRPHKVNFGVDFLTAIKNRYVLEDEPKEEETEQIVIIGNK---PVETIGFDSVIKQQ 129

Query: 133 SRFEELTSVSLSYMGVSSLGNPSQIGSVLPISSWTPGNLDMEVKSCRIDDFFFCAWKEGL 192
           S+  +L  VSL    V+  G+  +I    P            ++S  +      +W+E +
Sbjct: 130 SQLSKLQDVSLRNCAVNGAGDKGEIAKACP-----------NIRSIDLSKNLLSSWEEVI 188

Query: 193 GFYVEDFSRKFKVLLSSE 209
              + D  +  +VL  SE
Sbjct: 190 D--IADQLKHLEVLNLSE 188

[Close]
BLAST of Cla001025 vs. Swiss-Prot
Match: TBCE_DANRE (Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16
Identity = 56/149 (37.58%), Postives = 79/149 (53.02%), Query Frame = 1 

Query: 13  LGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDD-NNGKHDGSINGVRYFQAKSERS 72
           +G+RV   G+    GTV ++G +   +G W+GV+WD    GKHDGS +GVRYF  +    
Sbjct: 7   VGRRVCCDGE---RGTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRHPTG 66

Query: 73  GSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIKDKLS 132
           GSFVR Q  SFG+  + AL  RY  +  +   +EM + S      +V  VG + +K K S
Sbjct: 67  GSFVRPQKASFGVDYVTALKQRYEVEIEEVTAEEMKISSK-----TVVMVGFENVKKKQS 126

Query: 133 RFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
             + LT V L    VS+ G  ++I +  P
Sbjct: 127 -VKNLTEVGLRRCEVSAPGPENEIRNTTP 146

[Close]
BLAST of Cla001025 vs. Swiss-Prot
Match: TBCE_PONAB (Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-16
Identity = 59/197 (29.95%), Postives = 90/197 (45.69%), Query Frame = 1 

Query: 13  LGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDD-NNGKHDGSINGVRYFQAKSERS 72
           +GQRV   G+     TV F G +   +G W+GV+WD+   GKHDGS  G  YFQ +    
Sbjct: 10  IGQRVEVNGEH---ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 69

Query: 73  GSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIKDKLS 132
           GSF+R   ++FG   L A+  RY  +   EE+ +  +++  +K   V+ +G D I  + S
Sbjct: 70  GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNK--PVETIGFDSIMKQQS 129

Query: 133 RFEELTSVSLSYMGVSSLGNPSQIGSVLPISSWTPGNLDMEVKSCRIDDFFFCAWKEGLG 192
           +  +L  VSL    VS  G    +    P            ++   +      +W E + 
Sbjct: 130 QLSKLQEVSLRNCAVSCAGEKGGVAEGCP-----------NIRKVDLSKNLLSSWDEVI- 188

Query: 193 FYVEDFSRKFKVLLSSE 209
            ++ D  R  +VL  SE
Sbjct: 190 -HIADQLRHLEVLNVSE 188

[Close]
BLAST of Cla001025 vs. Swiss-Prot
Match: TBCE_DICDI (Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 42/141 (29.79%), Postives = 81/141 (57.45%), Query Frame = 1 

Query: 11  FRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDD-NNGKHDGSINGVRYFQAKSE 70
           F +G+RV   GD    GT+ + G ++G+ G W G++WDD   GKH G++ G +YF+  ++
Sbjct: 13  FYIGERVK--GDDGSVGTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFKCINK 72

Query: 71  RSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSA-SDKRVSVQFVGKDLIKD 130
            SGSF++ + L  G + ++++  ++      +  D++YV S   D ++ +Q +G +  ++
Sbjct: 73  GSGSFMKYEKLIKGETFMKSISDKFH--QKIDNYDDLYVDSTKEDIKIQIQMIGMNQTRE 132

Query: 131 KLSRFEELTSVSLSYMGVSSL 150
              +F   T +S SY+ +S +
Sbjct: 133 NQKKFIAQTLLSASYLPISEI 149

[Close]
BLAST of Cla001025 vs. TrEMBL
Match: A0A0A0LXY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G650100 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-80
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ SIQLQS+FRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTW+GVDWDDNNGKHDGSING
Sbjct: 126 MQDSIQLQSQFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSING 185

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYFQAKSERSGSFVR QNLS GISLLQAL+LRYRGDSTKEEEDEMYVLSASDKRVSVQF
Sbjct: 186 VRYFQAKSERSGSFVRFQNLSLGISLLQALELRYRGDSTKEEEDEMYVLSASDKRVSVQF 245

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNP QIGSVLP
Sbjct: 246 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPGQIGSVLP 285

[Close]
BLAST of Cla001025 vs. TrEMBL
Match: W9RLI1_9ROSA (Tubulin-specific chaperone E OS=Morus notabilis GN=L484_005214 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.5e-59
Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 1 

Query: 8   QSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSINGVRYFQAK 67
           +SEF+LGQRVH  GDPRR GTVA++G ++GYSG WIGVDWD+ +GKHDGSINGVRYF AK
Sbjct: 3   ESEFKLGQRVHSAGDPRRIGTVAYVGPVQGYSGVWIGVDWDNGDGKHDGSINGVRYFHAK 62

Query: 68  SERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIK 127
           SERS SFVR  NLS GISLL+AL LRY+GD+TKEEEDEMYVLSAS+KRVSV+ VGKD I+
Sbjct: 63  SERSSSFVRAHNLSSGISLLEALRLRYQGDTTKEEEDEMYVLSASNKRVSVELVGKDKIQ 122

Query: 128 DKLSRFEELTSVSLSYMGVSSLG-NPSQIGSVLP 161
           DKLSRFEELT  SLS++GVSS G +P  IG+VLP
Sbjct: 123 DKLSRFEELTGASLSFLGVSSPGSSPCDIGTVLP 156

[Close]
BLAST of Cla001025 vs. TrEMBL
Match: V7BNH3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 113/160 (70.62%), Postives = 135/160 (84.38%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ S++ + EF +GQRVH +GDPRR GTV ++G +EGYS TW+GVDWD+  GKHDGS+NG
Sbjct: 1   MQDSLEPRHEFWVGQRVHVLGDPRRIGTVKYVGPVEGYSDTWVGVDWDNGEGKHDGSVNG 60

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYF AKSERSGSFVR  NL+ GISLL+AL+ RY+ DSTK+EEDEMYVLS S++RVSVQ 
Sbjct: 61  VRYFHAKSERSGSFVRAHNLNQGISLLEALESRYKSDSTKDEEDEMYVLSTSNQRVSVQL 120

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           +GKD I+DKL RFEELTSVSLSYMGVSS G PSQI + +P
Sbjct: 121 LGKDKIQDKLRRFEELTSVSLSYMGVSSPGIPSQINNTVP 160

[Close]
BLAST of Cla001025 vs. TrEMBL
Match: V7BSG0_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 113/160 (70.62%), Postives = 135/160 (84.38%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ S++ + EF +GQRVH +GDPRR GTV ++G +EGYS TW+GVDWD+  GKHDGS+NG
Sbjct: 1   MQDSLEPRHEFWVGQRVHVLGDPRRIGTVKYVGPVEGYSDTWVGVDWDNGEGKHDGSVNG 60

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYF AKSERSGSFVR  NL+ GISLL+AL+ RY+ DSTK+EEDEMYVLS S++RVSVQ 
Sbjct: 61  VRYFHAKSERSGSFVRAHNLNQGISLLEALESRYKSDSTKDEEDEMYVLSTSNQRVSVQL 120

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           +GKD I+DKL RFEELTSVSLSYMGVSS G PSQI + +P
Sbjct: 121 LGKDKIQDKLRRFEELTSVSLSYMGVSSPGIPSQINNTVP 160

[Close]
BLAST of Cla001025 vs. TrEMBL
Match: M5XWF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003930mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.2e-58
Identity = 113/160 (70.62%), Postives = 136/160 (85.00%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ S + + +FR+GQRVH  GDPRR GTV ++G ++GYSGTW+GVDWD+  GKHDG+ING
Sbjct: 1   MQESSESKPDFRIGQRVHSSGDPRRIGTVRYVGPVQGYSGTWVGVDWDNGEGKHDGTING 60

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           V+YFQA+SE+SGSFVR QNLS GISLLQAL LRYRGD+TKEEEDEMYVLSAS+KRV+VQ 
Sbjct: 61  VQYFQARSEQSGSFVRSQNLSSGISLLQALQLRYRGDTTKEEEDEMYVLSASNKRVNVQL 120

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGK+ I+DKLSR EELTS S+SY+GVSS G P  I + +P
Sbjct: 121 VGKEKIQDKLSRLEELTSASVSYLGVSSPGVPCDISTNVP 160

[Close]
BLAST of Cla001025 vs. NCBI nr
Match: gi|778663990|ref|XP_011660191.1| (PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 3.3e-80
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ SIQLQS+FRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTW+GVDWDDNNGKHDGSING
Sbjct: 1   MQDSIQLQSQFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSING 60

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYFQAKSERSGSFVR QNLS GISLLQAL+LRYRGDSTKEEEDEMYVLSASDKRVSVQF
Sbjct: 61  VRYFQAKSERSGSFVRFQNLSLGISLLQALELRYRGDSTKEEEDEMYVLSASDKRVSVQF 120

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNP QIGSVLP
Sbjct: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPGQIGSVLP 160

[Close]
BLAST of Cla001025 vs. NCBI nr
Match: gi|778663987|ref|XP_011660189.1| (PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 3.3e-80
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ SIQLQS+FRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTW+GVDWDDNNGKHDGSING
Sbjct: 27  MQDSIQLQSQFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSING 86

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYFQAKSERSGSFVR QNLS GISLLQAL+LRYRGDSTKEEEDEMYVLSASDKRVSVQF
Sbjct: 87  VRYFQAKSERSGSFVRFQNLSLGISLLQALELRYRGDSTKEEEDEMYVLSASDKRVSVQF 146

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNP QIGSVLP
Sbjct: 147 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPGQIGSVLP 186

[Close]
BLAST of Cla001025 vs. NCBI nr
Match: gi|700211527|gb|KGN66623.1| (hypothetical protein Csa_1G650100 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 3.3e-80
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ SIQLQS+FRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTW+GVDWDDNNGKHDGSING
Sbjct: 126 MQDSIQLQSQFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSING 185

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYFQAKSERSGSFVR QNLS GISLLQAL+LRYRGDSTKEEEDEMYVLSASDKRVSVQF
Sbjct: 186 VRYFQAKSERSGSFVRFQNLSLGISLLQALELRYRGDSTKEEEDEMYVLSASDKRVSVQF 245

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNP QIGSVLP
Sbjct: 246 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPGQIGSVLP 285

[Close]
BLAST of Cla001025 vs. NCBI nr
Match: gi|659090385|ref|XP_008445988.1| (PREDICTED: tubulin-folding cofactor E isoform X3 [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 9.6e-80
Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ S Q QSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTW+GVDWDDNNGKHDGSING
Sbjct: 1   MQDSFQPQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSING 60

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYFQAKSERSGSFVRVQNLS GISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF
Sbjct: 61  VRYFQAKSERSGSFVRVQNLSIGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGKDLIKDKLSRFEELTSVSLSYMGVSSLG+P QIGSVLP
Sbjct: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGDPGQIGSVLP 160

[Close]
BLAST of Cla001025 vs. NCBI nr
Match: gi|659090383|ref|XP_008445987.1| (PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 9.6e-80
Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 1 

Query: 1   MQGSIQLQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWIGVDWDDNNGKHDGSING 60
           MQ S Q QSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTW+GVDWDDNNGKHDGSING
Sbjct: 10  MQDSFQPQSEFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSING 69

Query: 61  VRYFQAKSERSGSFVRVQNLSFGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 120
           VRYFQAKSERSGSFVRVQNLS GISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF
Sbjct: 70  VRYFQAKSERSGSFVRVQNLSIGISLLQALDLRYRGDSTKEEEDEMYVLSASDKRVSVQF 129

Query: 121 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGNPSQIGSVLP 161
           VGKDLIKDKLSRFEELTSVSLSYMGVSSLG+P QIGSVLP
Sbjct: 130 VGKDLIKDKLSRFEELTSVSLSYMGVSSLGDPGQIGSVLP 169

The following BLAST results are available for this feature:
BLAST of Cla001025 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TBCE_ARATH3.4e-5368.87Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1[more]
TBCE_BOVIN2.6e-1630.30Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1[more]
TBCE_DANRE3.3e-1637.58Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2[more]
TBCE_PONAB7.4e-1629.95Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1[more]
TBCE_DICDI1.3e-1529.79Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce PE=3 SV=1[more]
BLAST of Cla001025 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXY6_CUCSA2.3e-8095.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G650100 PE=4 SV=1[more]
W9RLI1_9ROSA8.5e-5975.32Tubulin-specific chaperone E OS=Morus notabilis GN=L484_005214 PE=4 SV=1[more]
V7BNH3_PHAVU1.9e-5870.63Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE=4 SV=1[more]
V7BSG0_PHAVU1.9e-5870.63Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE... [more]
M5XWF5_PRUPE4.2e-5870.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003930mg PE=4 SV=1[more]
BLAST of Cla001025 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663990|ref|XP_011660191.1|3.3e-8095.63PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis sativus][more]
gi|778663987|ref|XP_011660189.1|3.3e-8095.63PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis sativus][more]
gi|700211527|gb|KGN66623.1|3.3e-8095.63hypothetical protein Csa_1G650100 [Cucumis sativus][more]
gi|659090385|ref|XP_008445988.1|9.6e-8095.63PREDICTED: tubulin-folding cofactor E isoform X3 [Cucumis melo][more]
gi|659090383|ref|XP_008445987.1|9.6e-8095.63PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000938CAP-Gly_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0016042 lipid catabolic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0004806 triglyceride lipase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU61771watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001025Cla001025.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU61771WMU61771transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainGENE3DG3DSA:2.30.30.190coord: 8..85
score: 4.1
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 13..79
score: 1.9
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 13..81
score: 8.1
IPR000938CAP Gly-rich domainPROSITEPS00845CAP_GLY_1coord: 33..64
scor
IPR000938CAP Gly-rich domainPROFILEPS50245CAP_GLY_2coord: 33..76
score: 16
IPR000938CAP Gly-rich domainunknownSSF74924Cap-Gly domaincoord: 8..148
score: 1.83
NoneNo IPR availablePANTHERPTHR15140TUBULIN-SPECIFIC CHAPERONE Ecoord: 4..160
score: 2.3
NoneNo IPR availablePANTHERPTHR15140:SF6PROTEIN COEL-1, ISOFORM Acoord: 4..160
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla001025Cla97C03G062030Watermelon (97103) v2wmwmbB128
Cla001025ClCG03G011750Watermelon (Charleston Gray)wcgwmB230
Cla001025Cucsa.356210Cucumber (Gy14) v1cgywmB639
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001025Watermelon (Charleston Gray)wcgwmB228
Cla001025Watermelon (97103) v2wmwmbB129