Cla000989 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGATGTATTGGCAAAGAAACACGAATCCTTGATTACTGCAAAGGAAATCTTGGATTCTTTAAAGGACATGTTCGGGATACCTTCATGGACCTTACGGCATGAGGCACTTAAATACGTTTATAACAAGCATATGAAGGAGGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGGTCCACTTCAATACTGCTGAAGTAAACGGGGTCACCATTGATGAGGCCAGTCAAGTAAGTTTTATTTTGGAGTCTCTTCCAAAGAGCTTCATACCATTTTGGACCAATGTTGATCTGAATAAAATAGAATTTAACTTGACAACCCTTATGAATGAGCTCTAGCATTTCCAGAACCTTACCAAGTCTAAGGGGAAGGAAGTGGAGGCAAACGTTGTAAGCACTGACTTGTGATACCAAGTGTTGGGGTGCGACAATGAGATTGTGGCTATGCGTTGCAAAAGGAGAAGTAGCCGAGAATGAGAGCAAAAATTTTTGGGAAGTAAAATTTTGGCTAAGTGTTGGTCAAGACCATGCGTTGTTGATTGACTCACGAAGGGTTGTGAGCTGAAGTAGCTGCCGCATCGAAGGATAAGTGATTTTTGGCGGGGAAGAAATGTGCTTGAACCATGCGTTAAAGTCACTCTGCGTTGAGGACAGACATGCGTTGAAGTCGCTCCGCGTCGAAGACAGAGTGGTCTTGACGCGACGAAGATAGTGTTGTATGACTGAGATGTATGCGTCAAAAATAGGAGGTGTTGAGGACGACGCCATGCGTTGGGTGTGGCTTGTTGCTGAAGGCGTTGGAGGAGAAGTTTAACTTGAGCGCCTCGCGTCGAAGTGAGAACCCCGCACCAGCCTGCAGGTGAGGGGTAATTCGGCAACATAATCTTGGTGTTTGTGAAGGTTAAGTCGGTAGTATATATAGTTGAATTAATTAAATGTTTAATCATTTTTAAAACATTTTCGAGAGCTTAAGTCGGTTCCACATTTCAGACAAACTTCAGGAGAAGATTAAGGAAGGTGTTCTTGTAGATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGGAACTGAAGATTGATCTTTAGTCGCACAGACTGAACAGTGGTTGATATTTGGAGTAGAACGAATAGAGGAAGCTGAGTTTAGAGCTGGAATTTGGAGGTCGGTAAGTTAACATAATTCTTAACAAGTCTTATGAAGGATAGTAAATTTGAAATTGAAGTTAATCATGTGAATCTTTAGGTGAAAGCAGCGCTTACGGGATTGTTAAGCAATCTATAGCAGCATGACGTGATTTTGAAATAACTAAAGAACGAAGAAGAGTTAAGCCTTGGAATTTTGAGGTAAGTTGTGAAACTCAATTCTCTATAAGTTTGTAGAAGGGAAGAAGTTCTAAATCCATCTGAATTTATGACTTTTAATAGATAGAAATAAGAACAAGAGGAAAGAAAGAAATCACGGTTGCTGGGTGCTGCTAAGAATCAGGTATCAGTGCGCTGTTTAAGTATTGATAGTGAGAGGAGTGTCGCTGAGACGCAAAGGAGGCTTCCGTCTCACAAAACTCGCTAGATATCGCTGGGTGTCGCTACTAAGATAAGGTAACGCTAGTGTCGCTCAACCTAGTATCGCTAGTAACAGATTCTGTTGGGTAGTATTGCTAGAAATCTCACTTATGATGTTAGTTTGGAAAAAATGGGAGATTCAATGTTAAGTAACGCAAGGTGAAATGTTTATTGCAGGTCAGGAAGAGATAGGGAAGGCGTATAACCCATGCAAGGCCTAGGAAGAGTTGTGAGTGACTACTTTATTCTTCAATTGATTTTCATTAAAAATGTTCTTATGGAATATGATTTTGCGATGAACTGTTTAAAATGTAAAATGTTGATTGCATTTCTTACAAGGTATGTTATACGTTTTCTAAAGTTGATAGAAAGCATTTACTGTTATGAAAGGTTATTGAATAAAGATCTGCATGATTTTCTATGAAGGGTTTTCCATATGAACTATTCATGTAAACGGATTCTAAAATGTTTTAGAGGAGGCTCAGTGCTCAAGGACATGAGAAGGCACGTGAGTTTCCCCGGGACCCAGTACTGAAGGACATGGAGAAGGTACTCGGGCAACCCGTCATATTCCTATGCACAAAGAGGTTGATTTGGCTATTGCGTCGAGTTGCTCCGCATTAAGCTAGGGATGATTTCGACGTTGGGTGTGTTAAGCCTTGCTCCACCCCCAACTAAGGTTGTTTTCGACGTTGAGTGCGTTGAACCGTTGCTCCGCCTCAACTAAAGGAAAAGTTTTGAAAAATCAAACTGTTACTGTTTCACTTCTTTGGAAAACAGTCATATATGATTTGAAATTGGATTTATGAGATTGATGGATTTGTGGAAAGTATGCTTTAATTGAATAATATGTTAAATCCCTGTTTATCTGTTATATGTAACATGCCTGTTTTCAATAAATGTCCGTTCTACAAAGATTGGTTACTCACTGGACTGTTAGCTTATGTTTTTCAATGTTTTCTTTTTCTCCCCCCAGGTAGCAAGGACGTTCCCGGTGCTTAGCCTACTTCAGCTCACCCTGCCTAAGTCTCGAGTTTCAAAATTCAATCAAGTCTGA ATGTCTGATGTATTGGCAAAGAAACACGAATCCTTGATTACTGCAAAGGAAATCTTGGATTCTTTAAAGGACATGTTCGGGATACCTTCATGGACCTTACGGCATGAGGCACTTAAATACGTTTATAACAAGCATATGAAGGAGGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGGTCCACTTCAATACTGCTGAAGTAAACGGGGTCACCATTGATGAGGCCAGTCAACATTTCCAGAACCTTACCAAGTCTAAGGGGAAGGAAGTGGAGGCAAACGTTGTAGCAAGGACGTTCCCGGTGCTTAGCCTACTTCAGCTCACCCTGCCTAAGTCTCGAGTTTCAAAATTCAATCAAGTCTGA ATGTCTGATGTATTGGCAAAGAAACACGAATCCTTGATTACTGCAAAGGAAATCTTGGATTCTTTAAAGGACATGTTCGGGATACCTTCATGGACCTTACGGCATGAGGCACTTAAATACGTTTATAACAAGCATATGAAGGAGGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGGTCCACTTCAATACTGCTGAAGTAAACGGGGTCACCATTGATGAGGCCAGTCAACATTTCCAGAACCTTACCAAGTCTAAGGGGAAGGAAGTGGAGGCAAACGTTGTAGCAAGGACGTTCCCGGTGCTTAGCCTACTTCAGCTCACCCTGCCTAAGTCTCGAGTTTCAAAATTCAATCAAGTCTGA MSDVLAKKHESLITAKEILDSLKDMFGIPSWTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGVTIDEASQHFQNLTKSKGKEVEANVVARTFPVLSLLQLTLPKSRVSKFNQV
BLAST of Cla000989 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.3e-29 Identity = 73/131 (55.73%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of Cla000989 vs. TrEMBL
Match: E2GK52_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.7e-23 Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 1
BLAST of Cla000989 vs. TrEMBL
Match: A5AVN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017217 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.0e-15 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 1
BLAST of Cla000989 vs. TrEMBL
Match: W9SH28_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004989 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1
BLAST of Cla000989 vs. TrEMBL
Match: A0A165U314_9ROSI (Gag/pol protein OS=Momordica dioica PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13 Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 1
BLAST of Cla000989 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica]) HSP 1 Score: 135.2 bits (339), Expect = 7.7e-29 Identity = 73/131 (55.73%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of Cla000989 vs. NCBI nr
Match: gi|778697615|ref|XP_011654359.1| (PREDICTED: uncharacterized protein LOC105435361 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 4.6e-26 Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of Cla000989 vs. NCBI nr
Match: gi|659086056|ref|XP_008443743.1| (PREDICTED: uncharacterized protein LOC103487255, partial [Cucumis melo]) HSP 1 Score: 124.8 bits (312), Expect = 1.0e-25 Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 1
BLAST of Cla000989 vs. NCBI nr
Match: gi|659090028|ref|XP_008445796.1| (PREDICTED: uncharacterized protein LOC103488720 [Cucumis melo]) HSP 1 Score: 121.7 bits (304), Expect = 8.8e-25 Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 1
BLAST of Cla000989 vs. NCBI nr
Match: gi|299474489|gb|ADJ18450.1| (gag/pol protein [Bryonia dioica]) HSP 1 Score: 115.2 bits (287), Expect = 8.2e-23 Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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