Cla000962 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCAGCAACCCACCTCCTTCAAAAGCCCCAAACCCATTGCCTCCAAAAAGGCCGGCATTGCCTCATTCTCGAGGCATGGTAGTCGGAATCCGTCCACTACCTCCACCACACCTGAACCCCTCGCCGTTGTCCGCCCCAACAGTCCTGAGTTGGAGGCGGCATCAGCCATATCTCCGCCACGCTCCAAGGATCTGTCTGATGCTCAAGATATAGAGAGAAATGACGAGGCCAACGTCTTCGGAGACATTCTGGACACAATAGACGAAGAAGACGATGACTGGTTGGACGGTTTGGTCGACCAGAGGATGAAGAGTATGCCGCATGGGTCAGTCCCTGTGGTGAGTGGTCTTGAGGAGTCGGACTCCGATGACAGACCCATTGGAAAGGTAATTGCGACAGTGGAAAGGAAGAAATCCGCCGCGAAAAGGAAAAGCAGGCCAATCAGGGCCATGGAGGAAGAAGCCGAGGAAGATGTTCTTCCGCTAAGAAGAAAAAATAAAAAAGTCAGGGATGCGGGGCCATCCGAGGCTGTCGCAGCATCTTCCGCCGCATCATCGGTTGAGCGGCTAGCAGCTAGGGCGGCAGAAAAGTCCAAGAAGCTGAAAGACAACTTCAAAAGAATGAATGAAAGGACGGAGGGGTTTCTCGCCGCAAAGAAGAAAAGAAAAGAGGAAATCGCATCTGGCGAACAAGCTGCCAAGGAGGCCGCTAGAGAAGCTGAGTTTCTCCGTCGCATAGCAGAGATTGCAGCGGAGTTTGAAGTTGAGTTGGAAGGAAGTAATGCGGAGAGGGTCCCCAGAGCCGAACGCATCAAGCACAATATAAAGAAGATAAGGGAGGAGAAGAAGAAAGAAAAGGAGGTAGCAATAAGCATGGAAAGGCTACCAGAGAAAAAGAAGACTGAGGTGGCTAAGGCACCTGCAGTCGTAATAAGGGATTTGGATGCAGGTGGAGCAAGGAGAACGCTTGGTAGTCCCACCAATAGGAACGTGAAGGGAAAAGAGAAGGTTGAGGAACAACCCAAGGAGGCGGCGAAGGGCCGAAGGAAGCAGTTCAGTAGGCTCCATACTGAATTGGGGTTTTTCCCAGAGCCGATTGAGCTGCCTACCTTCATCATCCAAGGAGTCAACACAATGGGTTGGAGGCAATTTTGTGAAAGTGCCCAAGTCATCCAACCCATCGCCGTGGAGGCATTCTATGAAGGAACTATCCATCGGAAAGCATACAAGGTCAAAGTTGAAGATGAGGTGATTTCCTTCGAGCCTCAGGAGATCAACAGGTTGTTTGATCTTCCCGACATTGCCGCGGCAGATGGTAACAGAATCATGTCGACGCCAACAGAAGTCGAAATGAATGATGCCCTTACAACCATCGTCAAACCGTGGTCAAAGTGGAACACTTCCTCAAAGGGCATTCATACATTAGCGCCAAACTGTTTGATCGCGGAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTCCTCCCCACTACGCATGATGCCTCAATAACAAGGGATCGTGCCATGGTCATTTATTGCATCATGCTGGGAATTCGGTTAGATGTTGGACGCATCATTGCCCCACAGATTCGGGGGATGTTCTTCAAGCCTAGGGGTCAGTTGTTCTTCTCCTTTCTTGTGACAAGACTGTGCGCCAACGCGGAATGGATGGAGGATGCGCCAGTCAAAGCAGTAAATGGAGTTCTCTCAGCCCAGAGTCTGAGAAGGATATTGAAAGACTCCCCGCATCTGCTTGAGGCGGCCAACACAAGAAGAGGCCAAACAAGTCACAAGAACCATCATCCCCCCAACCTCCTCAACCCAAGAAGAGAAAACTTGTCAAGAAGCATTTTGAAATGA ATGGCTTCCCAGCAACCCACCTCCTTCAAAAGCCCCAAACCCATTGCCTCCAAAAAGGCCGGCATTGCCTCATTCTCGAGGCATGGTAGTCGGAATCCGTCCACTACCTCCACCACACCTGAACCCCTCGCCGTTGTCCGCCCCAACAGTCCTGAGTTGGAGGCGGCATCAGCCATATCTCCGCCACGCTCCAAGGATCTGTCTGATGCTCAAGATATAGAGAGAAATGACGAGGCCAACGTCTTCGGAGACATTCTGGACACAATAGACGAAGAAGACGATGACTGGTTGGACGGTTTGGTCGACCAGAGGATGAAGAGTATGCCGCATGGGTCAGTCCCTGTGGTGAGTGGTCTTGAGGAGTCGGACTCCGATGACAGACCCATTGGAAAGGTAATTGCGACAGTGGAAAGGAAGAAATCCGCCGCGAAAAGGAAAAGCAGGCCAATCAGGGCCATGGAGGAAGAAGCCGAGGAAGATGTTCTTCCGCTAAGAAGAAAAAATAAAAAAGTCAGGGATGCGGGGCCATCCGAGGCTGTCGCAGCATCTTCCGCCGCATCATCGGTTGAGCGGCTAGCAGCTAGGGCGGCAGAAAAGTCCAAGAAGCTGAAAGACAACTTCAAAAGAATGAATGAAAGGACGGAGGGGTTTCTCGCCGCAAAGAAGAAAAGAAAAGAGGAAATCGCATCTGGCGAACAAGCTGCCAAGGAGGCCGCTAGAGAAGCTGAGTTTCTCCGTCGCATAGCAGAGATTGCAGCGGAGTTTGAAGTTGAGTTGGAAGGAAGTAATGCGGAGAGGGTCCCCAGAGCCGAACGCATCAAGCACAATATAAAGAAGATAAGGGAGGAGAAGAAGAAAGAAAAGGAGGTAGCAATAAGCATGGAAAGGCTACCAGAGAAAAAGAAGACTGAGGTGGCTAAGGCACCTGCAGTCGTAATAAGGGATTTGGATGCAGGTGGAGCAAGGAGAACGCTTGGTAGTCCCACCAATAGGAACGTGAAGGGAAAAGAGAAGGTTGAGGAACAACCCAAGGAGGCGGCGAAGGGCCGAAGGAAGCAGTTCAGTAGGCTCCATACTGAATTGGGGTTTTTCCCAGAGCCGATTGAGCTGCCTACCTTCATCATCCAAGGAGTCAACACAATGGGTTGGAGGCAATTTTGTGAAAGTGCCCAAGTCATCCAACCCATCGCCGTGGAGGCATTCTATGAAGGAACTATCCATCGGAAAGCATACAAGGTCAAAGTTGAAGATGAGGTGATTTCCTTCGAGCCTCAGGAGATCAACAGGTTGTTTGATCTTCCCGACATTGCCGCGGCAGATGGTAACAGAATCATGTCGACGCCAACAGAAGTCGAAATGAATGATGCCCTTACAACCATCGTCAAACCGTGGTCAAAGTGGAACACTTCCTCAAAGGGCATTCATACATTAGCGCCAAACTGTTTGATCGCGGAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTCCTCCCCACTACGCATGATGCCTCAATAACAAGGGATCGTGCCATGGTCATTTATTGCATCATGCTGGGAATTCGGTTAGATGTTGGACGCATCATTGCCCCACAGATTCGGGGGATGTTCTTCAAGCCTAGGGGTCAGTTGTTCTTCTCCTTTCTTGTGACAAGACTGTGCGCCAACGCGGAATGGATGGAGGATGCGCCAGTCAAAGCAGTAAATGGAGTTCTCTCAGCCCAGAGTCTGAGAAGGATATTGAAAGACTCCCCGCATCTGCTTGAGGCGGCCAACACAAGAAGAGGCCAAACAAGTCACAAGAACCATCATCCCCCCAACCTCCTCAACCCAAGAAGAGAAAACTTGTCAAGAAGCATTTTGAAATGA ATGGCTTCCCAGCAACCCACCTCCTTCAAAAGCCCCAAACCCATTGCCTCCAAAAAGGCCGGCATTGCCTCATTCTCGAGGCATGGTAGTCGGAATCCGTCCACTACCTCCACCACACCTGAACCCCTCGCCGTTGTCCGCCCCAACAGTCCTGAGTTGGAGGCGGCATCAGCCATATCTCCGCCACGCTCCAAGGATCTGTCTGATGCTCAAGATATAGAGAGAAATGACGAGGCCAACGTCTTCGGAGACATTCTGGACACAATAGACGAAGAAGACGATGACTGGTTGGACGGTTTGGTCGACCAGAGGATGAAGAGTATGCCGCATGGGTCAGTCCCTGTGGTGAGTGGTCTTGAGGAGTCGGACTCCGATGACAGACCCATTGGAAAGGTAATTGCGACAGTGGAAAGGAAGAAATCCGCCGCGAAAAGGAAAAGCAGGCCAATCAGGGCCATGGAGGAAGAAGCCGAGGAAGATGTTCTTCCGCTAAGAAGAAAAAATAAAAAAGTCAGGGATGCGGGGCCATCCGAGGCTGTCGCAGCATCTTCCGCCGCATCATCGGTTGAGCGGCTAGCAGCTAGGGCGGCAGAAAAGTCCAAGAAGCTGAAAGACAACTTCAAAAGAATGAATGAAAGGACGGAGGGGTTTCTCGCCGCAAAGAAGAAAAGAAAAGAGGAAATCGCATCTGGCGAACAAGCTGCCAAGGAGGCCGCTAGAGAAGCTGAGTTTCTCCGTCGCATAGCAGAGATTGCAGCGGAGTTTGAAGTTGAGTTGGAAGGAAGTAATGCGGAGAGGGTCCCCAGAGCCGAACGCATCAAGCACAATATAAAGAAGATAAGGGAGGAGAAGAAGAAAGAAAAGGAGGTAGCAATAAGCATGGAAAGGCTACCAGAGAAAAAGAAGACTGAGGTGGCTAAGGCACCTGCAGTCGTAATAAGGGATTTGGATGCAGGTGGAGCAAGGAGAACGCTTGGTAGTCCCACCAATAGGAACGTGAAGGGAAAAGAGAAGGTTGAGGAACAACCCAAGGAGGCGGCGAAGGGCCGAAGGAAGCAGTTCAGTAGGCTCCATACTGAATTGGGGTTTTTCCCAGAGCCGATTGAGCTGCCTACCTTCATCATCCAAGGAGTCAACACAATGGGTTGGAGGCAATTTTGTGAAAGTGCCCAAGTCATCCAACCCATCGCCGTGGAGGCATTCTATGAAGGAACTATCCATCGGAAAGCATACAAGGTCAAAGTTGAAGATGAGGTGATTTCCTTCGAGCCTCAGGAGATCAACAGGTTGTTTGATCTTCCCGACATTGCCGCGGCAGATGGTAACAGAATCATGTCGACGCCAACAGAAGTCGAAATGAATGATGCCCTTACAACCATCGTCAAACCGTGGTCAAAGTGGAACACTTCCTCAAAGGGCATTCATACATTAGCGCCAAACTGTTTGATCGCGGAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTCCTCCCCACTACGCATGATGCCTCAATAACAAGGGATCGTGCCATGGTCATTTATTGCATCATGCTGGGAATTCGGTTAGATGTTGGACGCATCATTGCCCCACAGATTCGGGGGATGTTCTTCAAGCCTAGGGGTCAGTTGTTCTTCTCCTTTCTTGTGACAAGACTGTGCGCCAACGCGGAATGGATGGAGGATGCGCCAGTCAAAGCAGTAAATGGAGTTCTCTCAGCCCAGAGTCTGAGAAGGATATTGAAAGACTCCCCGCATCTGCTTGAGGCGGCCAACACAAGAAGAGGCCAAACAAGTCACAAGAACCATCATCCCCCCAACCTCCTCAACCCAAGAAGAGAAAACTTGTCAAGAAGCATTTTGAAATGA MASQQPTSFKSPKPIASKKAGIASFSRHGSRNPSTTSTTPEPLAVVRPNSPELEAASAISPPRSKDLSDAQDIERNDEANVFGDILDTIDEEDDDWLDGLVDQRMKSMPHGSVPVVSGLEESDSDDRPIGKVIATVERKKSAAKRKSRPIRAMEEEAEEDVLPLRRKNKKVRDAGPSEAVAASSAASSVERLAARAAEKSKKLKDNFKRMNERTEGFLAAKKKRKEEIASGEQAAKEAAREAEFLRRIAEIAAEFEVELEGSNAERVPRAERIKHNIKKIREEKKKEKEVAISMERLPEKKKTEVAKAPAVVIRDLDAGGARRTLGSPTNRNVKGKEKVEEQPKEAAKGRRKQFSRLHTELGFFPEPIELPTFIIQGVNTMGWRQFCESAQVIQPIAVEAFYEGTIHRKAYKVKVEDEVISFEPQEINRLFDLPDIAAADGNRIMSTPTEVEMNDALTTIVKPWSKWNTSSKGIHTLAPNCLIAEANLWLYFIKRSLLPTTHDASITRDRAMVIYCIMLGIRLDVGRIIAPQIRGMFFKPRGQLFFSFLVTRLCANAEWMEDAPVKAVNGVLSAQSLRRILKDSPHLLEAANTRRGQTSHKNHHPPNLLNPRRENLSRSILK
BLAST of Cla000962 vs. Swiss-Prot
Match: Y9086_DICDI (Uncharacterized abhydrolase domain-containing protein DDB_G0269086 OS=Dictyostelium discoideum GN=DDB_G0269086 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 9.1e-09 Identity = 79/303 (26.07%), Postives = 123/303 (40.59%), Query Frame = 1
HSP 2 Score: 46.6 bits (109), Expect = 1.2e-03 Identity = 59/216 (27.31%), Postives = 91/216 (42.13%), Query Frame = 1
BLAST of Cla000962 vs. Swiss-Prot
Match: IF2_ALTMD (Translation initiation factor IF-2 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) GN=infB PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-08 Identity = 60/223 (26.91%), Postives = 100/223 (44.84%), Query Frame = 1
BLAST of Cla000962 vs. Swiss-Prot
Match: ENOPH_CULQU (Enolase-phosphatase E1 OS=Culex quinquefasciatus GN=CPIJ009638 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 5.9e-08 Identity = 66/249 (26.51%), Postives = 113/249 (45.38%), Query Frame = 1
BLAST of Cla000962 vs. Swiss-Prot
Match: TTN1_CAEEL (Titin homolog OS=Caenorhabditis elegans GN=ttn-1 PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 1.0e-07 Identity = 80/328 (24.39%), Postives = 148/328 (45.12%), Query Frame = 1
HSP 2 Score: 50.8 bits (120), Expect = 6.1e-05 Identity = 59/244 (24.18%), Postives = 102/244 (41.80%), Query Frame = 1
BLAST of Cla000962 vs. Swiss-Prot
Match: NST1_NEOFI (Stress response protein nst1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=nst1 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.8e-07 Identity = 81/301 (26.91%), Postives = 124/301 (41.20%), Query Frame = 1
BLAST of Cla000962 vs. TrEMBL
Match: W9RBS1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000844 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 9.2e-16 Identity = 71/261 (27.20%), Postives = 122/261 (46.74%), Query Frame = 1
BLAST of Cla000962 vs. TrEMBL
Match: W9QTD9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022412 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.7e-15 Identity = 61/233 (26.18%), Postives = 113/233 (48.50%), Query Frame = 1
BLAST of Cla000962 vs. TrEMBL
Match: W9S7D3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006967 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 4.7e-12 Identity = 66/262 (25.19%), Postives = 111/262 (42.37%), Query Frame = 1
BLAST of Cla000962 vs. TrEMBL
Match: A0A061FAJ6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_032752 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 6.1e-12 Identity = 48/192 (25.00%), Postives = 92/192 (47.92%), Query Frame = 1
BLAST of Cla000962 vs. TrEMBL
Match: Q7RC08_PLAYO (Erythrocyte binding protein OS=Plasmodium yoelii yoelii GN=PY05977 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 8.3e-09 Identity = 71/245 (28.98%), Postives = 115/245 (46.94%), Query Frame = 1
BLAST of Cla000962 vs. TAIR10
Match: AT1G76810.1 (AT1G76810.1 eukaryotic translation initiation factor 2 (eIF-2) family protein) HSP 1 Score: 57.0 bits (136), Expect = 4.8e-08 Identity = 58/209 (27.75%), Postives = 95/209 (45.45%), Query Frame = 1
HSP 2 Score: 43.1 bits (100), Expect = 7.2e-04 Identity = 56/238 (23.53%), Postives = 95/238 (39.92%), Query Frame = 1
BLAST of Cla000962 vs. NCBI nr
Match: gi|703082781|ref|XP_010092041.1| (hypothetical protein L484_000844 [Morus notabilis]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 71/261 (27.20%), Postives = 122/261 (46.74%), Query Frame = 1
BLAST of Cla000962 vs. NCBI nr
Match: gi|703087370|ref|XP_010093253.1| (hypothetical protein L484_022412 [Morus notabilis]) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-15 Identity = 61/233 (26.18%), Postives = 113/233 (48.50%), Query Frame = 1
BLAST of Cla000962 vs. NCBI nr
Match: gi|703121924|ref|XP_010102456.1| (hypothetical protein L484_006967 [Morus notabilis]) HSP 1 Score: 81.3 bits (199), Expect = 6.8e-12 Identity = 66/262 (25.19%), Postives = 111/262 (42.37%), Query Frame = 1
BLAST of Cla000962 vs. NCBI nr
Match: gi|590612524|ref|XP_007022408.1| (Uncharacterized protein TCM_032752 [Theobroma cacao]) HSP 1 Score: 80.9 bits (198), Expect = 8.8e-12 Identity = 48/192 (25.00%), Postives = 92/192 (47.92%), Query Frame = 1
BLAST of Cla000962 vs. NCBI nr
Match: gi|828335831|ref|XP_012575515.1| (PREDICTED: uncharacterized protein LOC101493401 isoform X1 [Cicer arietinum]) HSP 1 Score: 74.3 bits (181), Expect = 8.3e-10 Identity = 59/227 (25.99%), Postives = 103/227 (45.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |