Cla000961 (gene) Watermelon (97103) v1

NameCla000961
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 10664596 .. 10665686 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGATCTCGATGAAGTTCGGCGCAAGGAGATGGAACTTCTCGAGCGGCAAGAAGAGTTGGCTCAACAAGTCTCACAGTTGGGTCAGCAAGTGGCTCAGATGGCGCGCAACAATTGGAGCTTCGAAGTTTTGTTCAACGCCAAGCTCAACGTCAGGATGAACAATTCGGCACATGAAATGAGATAATTTATCTTCAAGATCATTGGTTGACTTTTTTTAATTATTTGTCTAGTTAAACCAAACTCAGCTACTTCCCCCGCGGACAACAATGACCACGACCCGGGGAGAACTTAAATTTAGGGGTGTTCTTTGGGATTTTTCCTTCTTTTCTTATGTTTGTTCCTTTGATTCTTTTGTAATTCTTTTGTAAATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGACAATTCATAGTACCGGGGAATTCTTGCTTTATTATTTTCTCCGCCTTGTTTCTGTTCTGCGTCCAGCCTCCATGATGAAATTTATGCACTTCCCCTGTAGACATTGAAACAAAAGGATTCTCACAAGCCTTGCGATATTACACTTCTAAAAAGTTAGTATGCCTGCAAGCTTTGCCTCAAACCTCTTTTACAACATTTTTCTAAGACAATCTCATAACTCGATTTCAGCAATGGGGACCTTGCTGCCTTCCAAATTTGGGGGTAAGAAAGGTTTGAGCCATGCATTCAGAATTCATAAAATTTCCAAATCAAATAAAAAAAAAATTAAAAAAATAATGCTTCACCTTTTATAGAAATATTGCATTTAGTAAAAATAATTATGAAAATATTGTAGTTTGGAAACTATTTAGGAAGCTTGACGCCTAACGCCTCAATCGTCAACCAAAGGGAGGTGTCGACCAAAGGCAAGCTCGACGCCTCAACCTACGACCAAAGGGAGGCGTCGACCAAAGGGAAGCTCGAAGCCTCAAAACCTTCCACCAAAGGGAGGCATCGACCAAAGGGAATCTCGATGCCTCAAAACCTTCCACCAAAGGGAGGCGTCGACCAAATTGAAGCTCGACGCCTCAACCTTCGACCAAACACCTAA

mRNA sequence

ATGGGAGATCTCGATGAAGTTCGGCGCAAGGAGATGGAACTTCTCGAGCGGCAAGAAGAGTTGGCTCAACAAGTCTCACAGTTGGGTCAGCAAGTGGCTCAGATGGCGCGCAACAATTGGAGCTTCGAAGTTTTGTTCAACGCCAAGCTCAACTTTGGAAACTATTTAGGAAGCTTGACGCCTAACGCCTCAATCGTCAACCAAAGGGAGGTGTCGACCAAAGGCAAGCTCGACGCCTCAACCTACGACCAAAGGGAGGCGTCGACCAAAGGGAAGCTCGAAGCCTCAAAACCTTCCACCAAAGGGAGGCATCGACCAAAGGGAATCTCGATGCCTCAAAACCTTCCACCAAAGGGAGGCGTCGACCAAATTGAAGCTCGACGCCTCAACCTTCGACCAAACACCTAA

Coding sequence (CDS)

ATGGGAGATCTCGATGAAGTTCGGCGCAAGGAGATGGAACTTCTCGAGCGGCAAGAAGAGTTGGCTCAACAAGTCTCACAGTTGGGTCAGCAAGTGGCTCAGATGGCGCGCAACAATTGGAGCTTCGAAGTTTTGTTCAACGCCAAGCTCAACTTTGGAAACTATTTAGGAAGCTTGACGCCTAACGCCTCAATCGTCAACCAAAGGGAGGTGTCGACCAAAGGCAAGCTCGACGCCTCAACCTACGACCAAAGGGAGGCGTCGACCAAAGGGAAGCTCGAAGCCTCAAAACCTTCCACCAAAGGGAGGCATCGACCAAAGGGAATCTCGATGCCTCAAAACCTTCCACCAAAGGGAGGCGTCGACCAAATTGAAGCTCGACGCCTCAACCTTCGACCAAACACCTAA

Protein sequence

MGDLDEVRRKEMELLERQEELAQQVSQLGQQVAQMARNNWSFEVLFNAKLNFGNYLGSLTPNASIVNQREVSTKGKLDASTYDQREASTKGKLEASKPSTKGRHRPKGISMPQNLPPKGGVDQIEARRLNLRPNT
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla000961Cla000961.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 4..38
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla000961Wax gourdwgowmB498
Cla000961Wax gourdwgowmB555
Cla000961Wax gourdwgowmB668
Cla000961Watermelon (97103) v1wmwmB024
Cla000961Watermelon (97103) v1wmwmB120
Cla000961Watermelon (97103) v1wmwmB149
Cla000961Cucumber (Gy14) v1cgywmB127
Cla000961Cucumber (Gy14) v1cgywmB385
Cla000961Cucumber (Gy14) v1cgywmB525
Cla000961Cucurbita maxima (Rimu)cmawmB061
Cla000961Cucurbita maxima (Rimu)cmawmB200
Cla000961Cucurbita maxima (Rimu)cmawmB378
Cla000961Cucurbita moschata (Rifu)cmowmB054
Cla000961Cucurbita moschata (Rifu)cmowmB107
Cla000961Cucurbita moschata (Rifu)cmowmB187
Cla000961Cucurbita moschata (Rifu)cmowmB371
Cla000961Watermelon (Charleston Gray)wcgwmB294
Cla000961Melon (DHL92) v3.5.1mewmB064
Cla000961Melon (DHL92) v3.5.1mewmB166
Cla000961Melon (DHL92) v3.5.1mewmB279
Cla000961Watermelon (Charleston Gray)wcgwmB073
Cla000961Watermelon (Charleston Gray)wcgwmB336
Cla000961Cucumber (Chinese Long) v2cuwmB041
Cla000961Cucumber (Chinese Long) v2cuwmB055
Cla000961Cucurbita pepo (Zucchini)cpewmB038
Cla000961Cucurbita pepo (Zucchini)cpewmB363
Cla000961Cucurbita pepo (Zucchini)cpewmB512
Cla000961Cucurbita pepo (Zucchini)cpewmB662
Cla000961Bottle gourd (USVL1VR-Ls)lsiwmB199
Cla000961Bottle gourd (USVL1VR-Ls)lsiwmB323
Cla000961Bottle gourd (USVL1VR-Ls)lsiwmB406
Cla000961Cucumber (Gy14) v2cgybwmB042
Cla000961Cucumber (Gy14) v2cgybwmB055
Cla000961Cucumber (Gy14) v2cgybwmB245
Cla000961Cucumber (Gy14) v2cgybwmB394
Cla000961Melon (DHL92) v3.6.1medwmB063
Cla000961Melon (DHL92) v3.6.1medwmB163
Cla000961Melon (DHL92) v3.6.1medwmB272
Cla000961Silver-seed gourdcarwmB0355
Cla000961Silver-seed gourdcarwmB0490
Cla000961Silver-seed gourdcarwmB0611
Cla000961Silver-seed gourdcarwmB1006
Cla000961Cucumber (Chinese Long) v3cucwmB048
Cla000961Cucumber (Chinese Long) v3cucwmB061
Cla000961Watermelon (97103) v2wmwmbB263
Cla000961Watermelon (97103) v2wmwmbB272