Cla000933 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla000933
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	DNA excision repair protein 1 (AHRD V1 -- F4QEU9_DICFS); contains Interpro domain(s) IPR004579 DNA repair protein rad10
Location	Chr8 : 12644307 .. 12654917 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGGAAGCGAGGAAGAGAAGTTACAGCAAACCGCTAACAAAAAGAGCAAGAAGACCATTATCAAGATACCCTCTTATCAAGAAGTCATCGAGAGCTCACAGCCAAAGTCACAATCCTTCTCCCAAGCCTTTGCGTTCCTCAAATCCTCTGAGTTTTACTCTCCTCCTCCAAAACCATTCTCTGCCTCCTCCTCTCAATCCTCGCCGGCTTCTGAGATCACAAACCCAAGGTGTCTCTTTCCCCATTTCCCTTTCAAACTCACCGTTTCACTTTCATTCACGCCGCCCGTAATTTATTTTTTATTTGTTTATTTTTTTTTAAAAATTTTTTTTTTTATGATTTTGTCTTTTGGGTTAGTTGGATTTCAATATGCAATGTATGGTCTGTTGTTGATTTCAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTACAGCTACTCCAATTAATAGCTTGTCGGTGCCGAGCTCTGTCAGTCGTAATGCCATTCTTGTGAGCAATAGACAGGTGAGGTTGTTAATATAAGGCTTTGGCACACCGTGGAGAACACCGTGTTTCTCCATTTGTGAGTTTCTTTGGCAGTTTATAAATGGTTTGGATCATACAGTTGAGATTATGGATAAGCGACTTCATTGGCTGGCTGTCTTGTAGCTTAGCGTTGCATGGTAGATGCGTCAGTTATAGTTATTAATTACTAGGAATATTGCAAAATATTACATGAATGTTAGGTCATACTTACTAATATCGAATTTAGTAATGATACTTTTAAAATGTCACCTTGCTATTAAACAAATCGTGGAAGTAATACTGTGAGAATGATTCTTTTGATGAATGTGAATATAGAGGGGTACAAAGACATATGATGGAAGGTTTCAGGGTTGGTGAAGGCATATCTCAAGCATTTGCTACTTGTTGATGATGAAACTCTTTTACGCCAGTGTTGAGAATTATTTTGGTGATCTTAATGAAATGTGGATGGTCTTTGAAGAGATCTCTTGGCCGAGAATTAAAAGATTGAAATCCTGAGGCTTAGCAGTCAAATTGTGATGCACATAAATTAGCAAATGAGGTCAATTGATTGGTTGTAAAAGTGTCCTACTCCTCCTTTGTTATTTTGGTTTTCCTTTTTCCGTGACACTAGGTAGAGTTCCTTATTTGGGTTGTTCAGAGTGATCAAGTACAAAAGAAATTTCCATGTTGAAATAAATCCTTGAAAAAGGATGTAGACTTACCGTCAGTATATGGTATAGATAATAAATATTCTCCGACTTATTGCCAATCTATGTTATAGTTAATAAATATTCTCCTCTATTACCCCTTCCCTTTTAGAAACTCTGGTGTTACTCAGAATTTCATTTGAAAGTCTTCGAGAGGACAATGGGTCTCATCTTGTCAAGTGGGAGTTTGTGTCCTTACTAGTTAGTGATGGGGTACAGGTGTTGAGAATTTAGTGAAAGTTCTTGGAAATGAAGATTATAAGAATGATTAATTATTTTCTTGGTTGGTTTTGTTAGGGGAGCTAATAATGTCTGCATTATGGGGTTTTGTCATGCGTTATCTAATAGGAAACAAGGGGATATTGTTGTTGTACTCTCTTTCTTGCGAGCTTTTTGGTTTTTTGATGGGAGAAGGGACTTTCTTGTGTGGTGCCATACTCCTTTGGAGGGCTTTTCTTGTAATTCATTTTTTCTTTGCTTGATCAACCCTTCTCCCTTGAGAGATTTAGTCTATGCCTTGATGTGGAGGAAGAAAATTCCTTAGAAGGTTAAGTTCTAGTTTTGTCCCTCATTATTTGATTGGGAAACAGGGATACTGTTGCTCTTCTCTCTTTATTGGGTATTTTCAGTTTCTAATGATAGAAGGGACTTTTGTGTGTGGTGCCATAATCCTTCAGAGGGGATTTTCTGGTAATTCCTTTTTTCTTTGTTTGGTCAATCTTCCCCCTTAAGATATTTGGTCTATGCCTTGATGTGGAGGACAAAAATCCCCAAGAAGGCTAAGTTCTACTTTTTTTGCTTGTTCTCTGATAGGGAAAAGGGATACCATTCCTCTTTTCTCTTTATTGGAGGTTCTTCATCTCTGATGGGAGAAGGAATATTCGTGTGTGGTGCCCTAATCCATCCTTTAGAGGGAGTTTCTAGTAATTCTTTTTTTCTTTGTTTGGTCAACCCTTCTCCATTGAGATATTTTGTCTATGCCTCGATGTGGAGGATGATAATCCCTAATAAGATTAAGTTCTTTATTTGGTTGGTTCTTCATGGTAGGGTTAATACTTTAGATCTGATGTCGAGGAGGATGTCTTCCTTGATGGGGTCATGGTGCTCCATTCTTTGAAGGAAAATTGCAGAGGACCTTGATCATCTTCTTTGGAGTTTTGATTTTGCATATGCTATGTGGACTTTTTTCTTTGATAAGTCTAGTTTTTTCTTAGCTAGACAACATGACTACTGAGAGATGATCGAGGAGTTCCTTCTTTATCCTTCTTTTAGTGAGAAAGGAAAGTTCTTGTGTTTGGCAAGAGTGTATTGTTTTTTGGGGTCGTTGGGGTGAAAGGAACAATAGAACCTTTGGAGGGCTTAAGCAAACTACTTATGATGTTTGGTCTCTTACCAGGTTCCATATATCCTTATGGGCTTCAGTATGAAGCTTTTATGTAATTATTCACTTAGTCTTATTTTGCTTGGAACTTCAGCTTTTCGAAAAACAAGGTTACATTTAAGAGCAAAGAGAAGTGTTAAAACACTCAAATTCCTAACATCAACTCATGAGCTTGCTACACTAGTGTTCTCGTAATTCTTCTCATGTTCTGATAAGACTCGGATTATGTATTCATGATTTAGGCCAAACGCGAAGGAAGCCGAGACTCCCCTCTTTACAAGCTCTCTAAACTACACCAATTCACTATGAAAAAGATGATCCCCTTCCTACCCCATACATGCTAGATATAACCCCCTCCCTACTAACTAACTGAATCTTCATCAAGGCCCACAATCAAAACGTCACTTTCCCCCATAACTAACTAACTTCTCCATTATTCTCTTTATTTACATTTTGTTCCCTACCTCTCTTTCTTTTTCTCATATACCTCCTAATAATCGAGGGCCTATCACTACCCACCCCCAAAAAATACCTTGTCCTCAAGGTGAAAGTCCGAGAATTGCTCGATAGTATGCAGTCCATTCTCCCACGTAGCATCGTCTTGTGACATCCTTTCCCACTGAATTAGCACCTCAAAATTAGTAGAAGATAGCATAGTAGCTCCAATCTTTTGTACACCTAATACAGAGATTGGTTTTACTGATCCACTTTCTTATAGCAGGATGGGTGTAGATATCCTTGGCAAAATAAAGCCAACTGCCCTTCGTAGTTGTGACACATGCAAGACTGGATGGATATCGACGTTTGCTAGGAGATCGAGCTTATACGCCACAGGGCCAATGCGTTCAATAATTTGGAAGGGTCCAATGAATCGTGGTGCTAACCTTGGGTATTTATGGATAAATAGTGTGCTCTGTCTATATGATCGAAGTTTAATATAAACCCAATAAGTGATGTTGAACTCTACTTCTCTTCGTTTAGCATCCACCAAGGACTTCATCTGCTATTGAGTTCGTTCCAATGTGGCCTTCAAGTCTTTCGACATTTCATCACGATCCTTTAGAAGATTATCTATTGCACCGACCACTGCCACTTTTGCTTCGTATGAAATCATAGACGGAATTGGTCTCCCATAGACTACTCGGAAGGGGTCTTCTTCAAGGAAGTGTGATAACTGGTGTTGTAGTTGTATACAACCTAAGCTAACCATTTTGTCCACTTTGTCGGTGTCTCCATTGTGAAACATCTCAAATATGCTTCTAGTCCCCTGTTAACTACTTTCGTTTGCCCATCCGTTTGAGGGTGATAAGTCGTTCTCCTTGTGCCCATCAATCGAAATAATTCATCCCAAAACAAACTTGTGAATACCTTATCTTTGTCTAAGACTATACTCTTCGGAACCCCATATAGTTGCACAATCTCTCTAAGGAAAACCGCAGCTACTACGACAGTTGTATATGGGTGTTTTAGTGGGATAAAATGGGCATATTTTGATAATCTATCCATCACTACCAATATTGAGTTGTATCCCTCAGATTTGGGTAGGCCATCGATGAAATCAATCAAGATATCATCCCATATCATTTCCAGTATTGGCAAAGGTTGTAACAACCCCAGGGGAGTTAAGGATAAATATTTGGGTTGTTGACATTTTGAACAATCCCCAACAAATGCACGAACAGAAGCTTTCATTTTGGTCCAAAATAACTCCTTCTTTACACGTTGATACTTTTTTAATACTCCATTATGTCCTCCTACAAGATTGTTGTGAAACTCTTGAAGCAATAGGGGTATAGTATGAGAGGTGGGAGGCAACACAATCCTTTGCTTGTATAACAATAAGTCCCCTGCCATGGTATACCCAGCTGGAACTTGTCCACCCTCACTTATGTTCGTTGGATCTTTCTCAAACCTTCGTCATACTCAATTTGAGCCACAAAAACGGCTGTGTTAATGCCTGCTACACAACTTACGACAAATAATTCAGCTGCTGTCAAAATTCGTGATAGAGCGTCCGCAATAGTATTTTCCAACCCTTTCTTATATTCGATCACAAAGTCATATCCAATTAATTTAGCTACCCATTTTTGATACTCTCTAGCTATAATCCGCTGCTCCAAAAGGAACTTGAGGCTTTTTTGATCTGTTCGAATTGTGAACCGGCGTCCCAAGAGATAAGGTTGCCATTTCTGTACAGCCAAGACAATAGTGATTAATTCTCGCTCATAGACTGCCTTCAACCGGTGAGTTGGGGGCAACGCGTGACTAAAGAATGCTGAAAGGTGGCCTTGTTGCATCAGGAATTGTAGCTTGATTGAGGGCTCTATAATCAACGCAAAACCTCCAACTTCCATCCTTTTTTTTACTAAAAGAATGGGGTGGGAGAATGGGCTGGTACTAGGTTCAATCTCATCTTTTTGAAATTGTGGGTAGCGGTATGGACGTATGTTCACAGGTCCTTCCCCTTGTTTAAGTTCAATGGACTGGTCAAGATACCTTGCTGGTGGCAGCCCTTTAATTGGTTGGAACATTGATTGAAAACGCTATAGGACTCATTGGATTTCTAGGTACTTTTCAGTATGCCTGTGATCATCTTGATCTTCAAGAATGTAATTTCACTGCATTCAGCTCAAGTAATATCCCCTATTCTTCCTCCTTCACATGCTTCATTATTGACTTAAGGGATATTTGTGACTTTACTAACCTTCGACCTTTGAGTCACCAATTTGAAATTTTATTTCCGAAGTACTCCAATCGCATTCAACCTGCCCAAGTGTCCTCAACCACTGCACTTCTAAGATGGCATCGACATTGCCCAAAGACAAAGGGAAAAGTCATTAATGATAGCTAAATTAGGGAGGTTAAGGACGACACCTTTGCAAATTCCTGTTGTTCGAACAAATTTCCCTGTACCCAACATAATTCCATAACTTGAAGTCGGCGATGGAGTAGGTTGAGTAGTTCACTAGCTCTTCATCAATGAAGTTGTGGGATGCGCCACTATCGATTAATATCACCACGTTCTTCTCCCCTAACAATTTCTGTCGGCTCCATGTCTAGTGTTTCTAGCATTGTTGGAGGAACTTCCTCTTTTGTAGCTGTTTCTTTGGTTGCCTCCATGATGATTTCCCCTTCCTCTTCATTTGGATGAATGAATAGATTCAATTCCTTCCTTTTACAACGATGACCCCCACTATACTTCTCGTCACAAAAATAACATAGGCCCTTATCTCTCTGGCTTTGCATTTCGCTATCGGACAATCGTCGGTACGTTCCAGTAGTAAAGGTTTTTCCGTTCGTGTCACACAGAGTCACCGAATTTGAAGAGGTTGCTAAAATTTTGATTAGGGTCAAGGGAAATAGTTCTGGTGACAATTGGGTTTGGGTTAGGTTGAATTTGACTCGACTGTCTTATTGGTCGTGCCCGTGCTTCCTCCTCCCCATTTCTTTTGCCGGGCTTCTTCCATATCTTCAATAAGTTGGGCCATCCTCATTTTTTCTTTAAGGCCCACTAGTTTGAACGGTCTCATCTCTATTTGGATATCCCTCTTTAAGCCCACTTACGAATTTGCTTTCCAGGGAAGCATCAAACAAATCTTTCAAGGGCCCAGACAATTGTTCGAATTTACATTTTTATGCCCTCATTGCCTGTTGGTAAGAAACGGAGCAAGAGTTGCTCTTTAAATTTCACCCATGTGTCCATTGGCAACTTCCCATCGGTGCCATTCCAACGCTTCTCCTTCCAAGCACAACACTGTCACATCAAGTTTGTCCTTTTTCGTCAGCTGATTCACCACAAAATAACGCTCCACTCGATGAAACCATCCGAACGGATCATCTCCTACCTCCCTTTTGAAAATTGGTATTTTTAGTTTCCTTGAATACATATCGAACAAAGGTATCTCTCTTTTATCCTTCTCAGATTTGCTTCCCAACTGCTCTGTTCCCTCTGTCGCTGGTTGCTTACCCTTATTTGTCACTGTTCGCTCAGACAACGACGATCAACCTCTTCCTTCTCCCGTACCTCCTTTTCTTGACCAAGCTTCGAGTGCTAACAACATTCTTTGTTCCATCATTTCCTCCAATGCTTTCATTTGAGCTGCCATAGAGTTATCCATTACTTGTTGCATTTCTGCAAAACACTGATCCATCCTAGCCTCCATACCCACCTGTAGCAAAGTGAGTTGTTCTTCAATCGTAGACACTCGAGCCTCCATTTTCTTTACCATCCCCCGAGGAGCGACGACTTCTGATACCACAATCAAAATGTCAGTCTCCCCCCATAACTAACTAACTTCTCCATGATTCTCTTTATTTACATTTTGTTCCCTACCTCTCTCTCTTTCTCATATACCTCCTAATAACCAGGGGCCTATTATGTTCCTTTCCAGCCACAGAAATCATAGTATGGCAAAGAAGTTAACCTACCAGAGATTGCTGGAGGTCTTTGTTGGGATATTGGCTTTCTGTTCGTTCTATGGAGAATTTTGCTCGTGAGAAAAACAGGATCGTTTATGGTAGGAATGTCTTTAGGGATGGTTTAGACTTTAGAGCATTTATACTTTACCTCACTCTAGACTTTTACACTCTCTTTCTTCAAGATGATCTGCTTAACTACCATTAACTTTATTATTAGTATTATTTTTCTTCCTTTCTTCTCTTTATCAAATGGATTGAACCTGCAACGTGGAGTATTGAACCTGGTTCAGCTGCCTTGCTGCCCCATAAAGCCAACAATCTATGAAATGTTTTGGATTTTTATTTTATTATTATTGTTTTGTGCTTAATATTTCCCAATGCCCAAGGGTATCTATGATCTGTTTTCTTTTCCTTTTTTTGTTTCTTAATTCGGTATTCCTAAAAGTGTTTCTTAATCTAAAAAGAAAAAATAGGAGAGAAAGAAATAATGAATATAAGCTTTTTGGCGTATTATTTCAAGTTTACTTTATTTGAAGTTTATGCCATTGTTATGTCGCTAATAATAGTCATGTTTCTTTCAGAAGGGAAATCCCCTTCTCAAACACATCAGGAATGTGACATGGACTTTTGCAGATGTAGTACCTGATTACTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGGTTTGAGTTTCATTCCCTTTCTGTTTACTCACTCATGGTATCAGAAGAAACAAAATTGAGCTCTCTAGATTTAGAATGCCCAGTGTGCATATGATCTTGGTTTGTCTGACTTGAGTGCAACATTGGCACTCATAAAGGAGAGTTTCTGAACCCTTAAATACATTCCTACTAGGCTTCTATTAAATGTGGTTATATTTGCATATAAGAGTTCTAGAATGACAAGAGTGTTTTCCTTTAGCATTTGATTTTTATAGAACCAAGCTTTCATTGAGAGAAATAAAAGAATGTACAAGGCATACAACAAACGAGCTCACAAAGGAAACCCAACTTAACTACATGAACAAATCCCAGTCCACCAAAATGAGATTCAGCTGGTAATTACAAAACACCCAATCATTGGGCATCTATAAAATAGATTTAAACCTAACCAACTCCCAAAGCTCCTCCCAAGATCCTTTATCCCCTCTAAAGATCCTATTGTTCCTCTCCAGCCAAATTCTCCACAAAATAGCAAAAAGAAAAACTAGATTGACACAAAACTCTTCCTTTATCTTGAAAAGAAGTGTTCAAAAGCACCTCCTTGATCATAGCAGCCTCTATTGGAAGCCAAAATAAACCTCGAAGGCCTGAAAAACAGACTCTAAAGGGAGAAAGAAAAATGAAAATTCCAAAGTAAAAAATCAAGGTCCTCCTGTTGCTACTTGCAGACATTGCAACACTAGAGGTGCTTTAGCATTTGAATTTATAACCTTACTACTGGTTTTGAACTCTCGCACCATCTTATCCGGGCAAAACATTATGCATCAATCACTTAATCATCCTCTTGGTTCTTCCATGTGTTCGAATATTTCATTGACTAGATTAATCCTTTTTTGCAGTCTTCGGTATCATCTACTGCATCCGGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTGGTTCTGTGTCATGTTGATGTGGTAAGAAACCATACTGGCTAGCCCGGTTTTATCTTACCCTTTCTCTGTTTTGCTGATGAAGACTTCAAATAGTTAATGTAGTTACCAACTCTTAGTCATTTTTATGCTTGCATGAAGTAATGGCATATTTATTTTATTTCAGGAAGATGTTGTCAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTACTTCACGATTGTACCCTTCTTTGTGCTTGGAGGTACATTTGATGCTCATTTGAAGTTGTTTTTTGGGTGCCGTTTTTACTTCTTTTACTTCTTTCTTTCTTCCTTTTTCCTCTTTTTTTTTTTGGGGGGGGTGTTATAAATGGATTTGACGTTTTCTGATATGTACTTGTGAAATCAATATACTTTTAGAGGGATTGATTGTGTAAATATTTAATCGTCAAGCATTTTAATGAGATCCATTCAAGATTTTGTTACGATTTTGATTGGAATTGACTTCTTTTGTCTATATATCTTCTATATTAAATCGGAAAGTGAAGATTAGGATTGGAATGAAACGTTTTGGGTATTCTGGTTGAGGTAAAGAGTAGCAACTCCATTCCTGGAAATTGACTTTTACATTTTATTTCTGCTTTTTATTAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACTATAAAAGTTTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCAGATGGACACTGACTATTTGTCACGGGTATTGATTTTTTAAAGCTTTTTCCTTATTGAACATTTATTTCATTTCTGTTACCAATATCATGTGGCCTTTTATTATATCAACTCTTAGCTATTTTTTCTTTTCCAAAAAGTCAAATCCAGCATAATTGGTTTTACTTTCTTAGGTCTTCAATGTATGTTCTGAATTAAAATTCTCATTTTAATTGTAGCTAACTCATGTCCTAACATCAGTTCGGCATGTTAACAAGACTGATGTGGTCACCCTTGGAACGACATTTGGGGTAAACCTCTGCTGTACTTTGACTAAGGTTCTTCCATTCTTGTCTGTTATGTCTTCTTTGGTGTAAAACTGCTAATTTGTGTTCTGCAGTCTCTATCTCATATTATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAGTCCCTTTTCCAAGCATGTCCTTGGTTCTTTACTCTTGTTCATTGGTTTTGTAAATTTCTTTTGAAAACATCCCATGTCTTTGATGTCATCCATACTTAATATTTGACGTAGTTGTTATCAACAATACAATAACATGCTCTTAATATGTAAGTAATAATAGAAGCATTTACAACTATTAGAGAATGGTGTTGGGGAAGAAATAAATGAAAGATCAGCGTCAAATAGTGACACTGTGTTAATAACATTATGTCTTCAACTGTGATATAAATAGCTTGATTTTATATTTCATTCATGAATATAATACCATTCTCCTCAATATTCTGTTTATGATCTTGATAGAGATTGTTGATAATTCTATTGAAACTGGCATTATTCATCCTCCACACCTATCTCAATTTTTTTTGTCATGTGAATGAGCTTATAGCATTTAAAATTTTAGAGTGATGTTTAGTTTTCTTGCATGAATGCTGTCATTAAATTCCTCTTACTCATCAGGTAAGGCGGCTTTATGACACCTTTCATGAACCATTCAAGCGCGTTGTTTCAATCCACCCTGTTGTTCCAGAAACTCCAACCCAGAATAGTACTGAACCTCGCTCAATGGATGAAGAACAAGATGTGGATGGGAAGAGAAAAGAAGATGGTAGCCAACACAAAAAAGAACCTGAATTAAATATCAAATCAGCTCTCTCTGCTGCTTTTGCCAAATATGCCGACAAAATTGGTAAAAGTAGTAGCATGCCACAAGAAGAAACAGGAGAACCTGGAAGTAGCAACTAA

mRNA sequence

ATGGAGGAAGGAAGCGAGGAAGAGAAGTTACAGCAAACCGCTAACAAAAAGAGCAAGAAGACCATTATCAAGATACCCTCTTATCAAGAAGTCATCGAGAGCTCACAGCCAAAGTCACAATCCTTCTCCCAAGCCTTTGCGTTCCTCAAATCCTCTGAGTTTTACTCTCCTCCTCCAAAACCATTCTCTGCCTCCTCCTCTCAATCCTCGCCGGCTTCTGAGATCACAAACCCAAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTACAGCTACTCCAATTAATAGCTTGTCGGTGCCGAGCTCTGTCAGTCGTAATGCCATTCTTGTGAGCAATAGACAGAAGGGAAATCCCCTTCTCAAACACATCAGGAATGTGACATGGACTTTTGCAGATGTAGTACCTGATTACTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTACTGCATCCGGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTGGTTCTGTGTCATGTTGATGTGGAAGATGTTGTCAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTACTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACTATAAAAGTTTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCAGATGGACACTGACTATTTGTCACGGCTAACTCATGTCCTAACATCAGTTCGGCATGTTAACAAGACTGATGTGGTCACCCTTGGAACGACATTTGGGTCTCTATCTCATATTATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAAGGCGGCTTTATGACACCTTTCATGAACCATTCAAGCGCGTTGTTTCAATCCACCCTGTTGTTCCAGAAACTCCAACCCAGAATAGTACTGAACCTCGCTCAATGGATGAAGAACAAGATGTGGATGGGAAGAGAAAAGAAGATGGTAGCCAACACAAAAAAGAACCTGAATTAAATATCAAATCAGCTCTCTCTGCTGCTTTTGCCAAATATGCCGACAAAATTGGTAAAAGTAGTAGCATGCCACAAGAAGAAACAGGAGAACCTGGAAGTAGCAACTAA

Coding sequence (CDS)

ATGGAGGAAGGAAGCGAGGAAGAGAAGTTACAGCAAACCGCTAACAAAAAGAGCAAGAAGACCATTATCAAGATACCCTCTTATCAAGAAGTCATCGAGAGCTCACAGCCAAAGTCACAATCCTTCTCCCAAGCCTTTGCGTTCCTCAAATCCTCTGAGTTTTACTCTCCTCCTCCAAAACCATTCTCTGCCTCCTCCTCTCAATCCTCGCCGGCTTCTGAGATCACAAACCCAAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTACAGCTACTCCAATTAATAGCTTGTCGGTGCCGAGCTCTGTCAGTCGTAATGCCATTCTTGTGAGCAATAGACAGAAGGGAAATCCCCTTCTCAAACACATCAGGAATGTGACATGGACTTTTGCAGATGTAGTACCTGATTACTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTACTGCATCCGGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTGGTTCTGTGTCATGTTGATGTGGAAGATGTTGTCAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTACTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACTATAAAAGTTTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCAGATGGACACTGACTATTTGTCACGGCTAACTCATGTCCTAACATCAGTTCGGCATGTTAACAAGACTGATGTGGTCACCCTTGGAACGACATTTGGGTCTCTATCTCATATTATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAAGGCGGCTTTATGACACCTTTCATGAACCATTCAAGCGCGTTGTTTCAATCCACCCTGTTGTTCCAGAAACTCCAACCCAGAATAGTACTGAACCTCGCTCAATGGATGAAGAACAAGATGTGGATGGGAAGAGAAAAGAAGATGGTAGCCAACACAAAAAAGAACCTGAATTAAATATCAAATCAGCTCTCTCTGCTGCTTTTGCCAAATATGCCGACAAAATTGGTAAAAGTAGTAGCATGCCACAAGAAGAAACAGGAGAACCTGGAAGTAGCAACTAA

Protein sequence

MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKRKEDGSQHKKEPELNIKSALSAAFAKYADKIGKSSSMPQEETGEPGSSN

Homology

[Close]

BLAST of Cla000933 vs. Swiss-Prot
Match: ERCC1_ARATH (DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 3.8e-138
Identity = 254/398 (63.82%), Postives = 306/398 (76.88%), Query Frame = 1


Query: 2   EEGSEEEKL-QQTANKKSKKTIIKIPSYQEVIESSQPKS---------QSFSQAFAFLKS 61
           ++G +   L QQ A K   + +I +PSYQEV+ESSQ KS         QSFSQAFAF+KS
Sbjct: 6   DDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKS 65

Query: 62  SEFYSPPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVS-- 121
           S+ YSPPP P SA++S S P+     P  + Q  T  +  ++S++TP+ + SVPS+ +  
Sbjct: 66  SDVYSPPP-PSSAAASSSQPSGASQVPHSSSQ--THQTDGASSSSTPVATGSVPSNTTQN 125

Query: 122 RNAILVSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 181
           RNAILVS+RQKGNPLLKHIRNV W F+D++PDY+LGQ+SCALYLSLRYHLLHPDYLY+RI
Sbjct: 126 RNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRI 185

Query: 182 RELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 241
           RELQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYEN
Sbjct: 186 RELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYEN 245

Query: 242 KPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGI 301
           KPADLIQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGI
Sbjct: 246 KPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGI 305

Query: 302 GERKVRRLYDTFHEPFKRVVS-----IHPVVPETPTQ---NSTEPRSMDEEQDVDGKRKE 361
           GERKV+RLYDTFHEPFKR  S     + P +PE P +   NS EP   DE+   D ++++
Sbjct: 306 GERKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRK 365

Query: 362 DGSQHKKEPELNIKSALSAAFAKYADKIGKSSSMPQEE 380
              + + EPE  +K+ALSA FA+Y+D++ K     +E+
Sbjct: 366 ---KKEPEPEKTVKTALSAVFARYSDRLSKKKEKQKEK 397

[Close]

BLAST of Cla000933 vs. Swiss-Prot
Match: ERCC1_HUMAN (DNA excision repair protein ERCC-1 OS=Homo sapiens GN=ERCC1 PE=1 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-67
Identity = 141/312 (45.19%), Postives = 195/312 (62.50%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           M+ G ++E + Q +   ++K  + IP  ++ +     K               F S    
Sbjct: 1   MDPGKDKEGVPQPSGPPARKKFV-IPLDEDEVPPGVAKPL-------------FRSTQSL 60

Query: 61  PFSASSSQSSPAS----EITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVS 120
           P   +S+Q++P +     I+ P +       + S   +  TP  +L  P + S N+I+VS
Sbjct: 61  PTVDTSAQAAPQTYAEYAISQPLEGAGATCPTGSEPLAGETPNQALK-PGAKS-NSIIVS 120

Query: 121 NRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNF 180
            RQ+GNP+LK +RNV W F DV+PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L KNF
Sbjct: 121 PRQRGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNF 180

Query: 181 KLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQ 240
            LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+ 
Sbjct: 181 ALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLM 240

Query: 241 GQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRR 300
            +++ D++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDLA CPG+G +K RR
Sbjct: 241 EKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARR 296

Query: 301 LYDTFHEPFKRV 309
           L+D  HEPF +V
Sbjct: 301 LFDVLHEPFLKV 296

[Close]

BLAST of Cla000933 vs. Swiss-Prot
Match: ERCC1_BOVIN (DNA excision repair protein ERCC-1 OS=Bos taurus GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.8e-67
Identity = 143/306 (46.73%), Postives = 200/306 (65.36%), Query Frame = 1


Query: 6   EEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPKPFS-A 65
           +EE + + A   ++K  + IP+ ++V+    P ++   ++   L + E  SPPP P + A
Sbjct: 2   DEEGVHKPAGPPTRKKFL-IPTDEDVVPP--PGAKPLFRSTRSLPTVET-SPPPGPQTYA 61

Query: 66  SSSQSSP--ASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQKGN 125
             + S P   +E T P   + L         +  TP N    P + S N+I+VS RQ+GN
Sbjct: 62  EYALSGPPGGAEATRPVGPEPL---------AEETP-NQAPKPGAKS-NSIIVSPRQRGN 121

Query: 126 PLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVL 185
           P+L+ +RNV W F DV+PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L K++ LRV+L
Sbjct: 122 PVLRFVRNVPWEFGDVLPDYVLGQSTCALFLSLRYHNLHPDYIHQRLQSLGKSYALRVLL 181

Query: 186 CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTD 245
             VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+  +++ D
Sbjct: 182 VQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 241

Query: 246 YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFH 305
           ++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDL+ CPG+G +K RRL+D FH
Sbjct: 242 FVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLSLCPGLGPQKARRLFDVFH 292

Query: 306 EPFKRV 309
           EPF +V
Sbjct: 302 EPFLKV 292

[Close]

BLAST of Cla000933 vs. Swiss-Prot
Match: ERCC1_MOUSE (DNA excision repair protein ERCC-1 OS=Mus musculus GN=Ercc1 PE=2 SV=2)

HSP 1 Score: 252.3 bits (643), Expect = 8.6e-66
Identity = 135/308 (43.83%), Postives = 186/308 (60.39%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           M+ G +EE   Q +   +++  + IP  +E +  +  K    S     + ++  +  P  
Sbjct: 1   MDPGKDEESRPQPSGPPTRRKFV-IPLEEEEVPCAGVKPLFRSSRNPTIPATSAHVAP-- 60

Query: 61  PFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQK 120
                  Q+     IT P         + S  A+   P  +L   +    N+I+VS RQ+
Sbjct: 61  -------QTYAEYAITQPPGGAGATVPTGSEPAAGENPSQTLK--TGAKSNSIIVSPRQR 120

Query: 121 GNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNP+LK +RNV W F +V+PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L KNF LRV
Sbjct: 121 GNPVLKFVRNVPWEFGEVIPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRV 180

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           +L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+  +++
Sbjct: 181 LLVQVDVKDPQQALKELAKMCILADCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEKLE 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300
            ++LSR T  LT+V+ VNKTD  TL  TFGSL  +  AS EDLA CPG+G +K RRL++ 
Sbjct: 241 QNFLSRATECLTTVKSVNKTDSQTLLATFGSLEQLFTASREDLALCPGLGPQKARRLFEV 296

Query: 301 FHEPFKRV 309
            HEPF +V
Sbjct: 301 LHEPFLKV 296

[Close]

BLAST of Cla000933 vs. Swiss-Prot
Match: SWI10_SCHPO (Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swi10 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-48
Identity = 94/200 (47.00%), Postives = 135/200 (67.50%), Query Frame = 1


Query: 106 SSVSRNAILVSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYL 165
           S V+ ++ILV+ RQKGNPLL H+RNV W + D+VPD+++G   C+L+LSL+YH LHP+Y+
Sbjct: 36  SRVTAHSILVNPRQKGNPLLPHVRNVPWEYTDIVPDFVMGTGICSLFLSLKYHHLHPEYI 95

Query: 166 YYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIK 225
           Y RI +L K++ LR++L  VDVE+    + E+ KT++++  TL+ AWS EE  RYLET K
Sbjct: 96  YSRISKLGKSYNLRILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEAARYLETYK 155

Query: 226 VYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLAR 285
            YEN    LI  +  TDYLS++   LTS+R +NK+D ++L + FGSL   + AS ++L +
Sbjct: 156 AYENMSPALIMEKPSTDYLSQVQSFLTSIRGINKSDSLSLLSKFGSLERALVASRDELEQ 215

Query: 286 CPGIGERKVRRLYDTFHEPF 306
             G G  KV R  +   +PF
Sbjct: 216 LEGWGPTKVNRFLEAVQQPF 235

[Close]

BLAST of Cla000933 vs. TrEMBL
Match: A0A0A0KDK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014860 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 1.8e-195
Identity = 350/389 (89.97%), Postives = 360/389 (92.54%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGS E+  QQT   K  KTIIKIPSYQEVI+SSQP SQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQK 120
           P S SSSQS P S ITNPRKNDQLDTSSSSTSAS ATP+NSLSV SSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNV W FADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           +LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MD
Sbjct: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300

Query: 301 FHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKR-KEDGSQHKKEPELNIKSALS 360
           FHEPFKRVVS HP VPETPTQ ST+PRS +EEQDVDGKR +EDGSQHKKEP+LN+KSALS
Sbjct: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIGKSSSMPQE-ETGEPGSSN 388
           AAFAKYADKI KS S+PQE E GEP SSN
Sbjct: 361 AAFAKYADKIAKSGSIPQEKEKGEPESSN 389

[Close]

BLAST of Cla000933 vs. TrEMBL
Match: M5VZH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006720mg PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148
Identity = 277/398 (69.60%), Postives = 314/398 (78.89%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKS---------QSFSQAFAFLKS 60
           ME+    +  +   NK  KKT+IKIPS+QEV+ES+Q KS         QSFSQAFAF+KS
Sbjct: 1   MEDEHRGQNPESDQNKNKKKTVIKIPSFQEVLESAQSKSTPLSLFTPSQSFSQAFAFVKS 60

Query: 61  SEFYSPPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVS-- 120
           SEFYS PP P  A+SSQ   AS+  N  K  Q D  SSS       P N+++  SS +  
Sbjct: 61  SEFYSSPPPP--ATSSQPLQASDTGNSSKTGQSDVPSSSA------PTNAVASSSSPAQR 120

Query: 121 RNAILVSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 180
           RNAI+VS+RQKGNPLLKHIRNV W FAD+V DYLLGQSSCALYLSLRYHLLHPDYLYYRI
Sbjct: 121 RNAIIVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRI 180

Query: 181 RELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 240
           RELQKNFKLRVVLCH+DVEDVVKPLLEVTKTALLH+CTLLC WSLEECGRYLETIKVYEN
Sbjct: 181 RELQKNFKLRVVLCHIDVEDVVKPLLEVTKTALLHECTLLCGWSLEECGRYLETIKVYEN 240

Query: 241 KPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGI 300
           KPAD+IQGQMDTDYLSRL H LT+VRHVNKTDVVTLGTTFGSLSHIMD SMEDLARCPGI
Sbjct: 241 KPADIIQGQMDTDYLSRLNHALTTVRHVNKTDVVTLGTTFGSLSHIMDVSMEDLARCPGI 300

Query: 301 GERKVRRLYDTFHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKRKEDGSQHKKE 360
           GERKV+RLYDTFHEPFKRVV+  P VPET   ++ EP S+DEE     + +++  + KKE
Sbjct: 301 GERKVKRLYDTFHEPFKRVVASRPAVPETSAPSNAEPGSVDEEDKEAEETEDESKRRKKE 360

Query: 361 PELNIKSALSAAFAKYADKIGKSSSMPQ-EETGEPGSS 387
           PEL +KSALS AF+KYADK+ K +S  Q EE GE  ++
Sbjct: 361 PELTVKSALSVAFSKYADKVNKKNSKTQREEKGETSAA 390

[Close]

BLAST of Cla000933 vs. TrEMBL
Match: W9R7C9_9ROSA (DNA excision repair protein ERCC-1 OS=Morus notabilis GN=L484_003710 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 5.0e-145
Identity = 277/395 (70.13%), Postives = 317/395 (80.25%), Query Frame = 1


Query: 1   MEEGSEEEKLQQT---ANKKSKKTIIKIPSYQEVIESSQPKS---------QSFSQAFAF 60
           MEE   +++ + T    N  + K +IKIPSYQEV+++SQ KS         Q+FSQAFAF
Sbjct: 1   MEEDGYDDRGKNTNTNTNTNTNKVVIKIPSYQEVLKTSQWKSTPPSLFAPSQTFSQAFAF 60

Query: 61  LKSSEFYSPPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSV 120
           +KSSEFYSPPP      SS S+ ASEIT  R+  Q +  SSS+SAST+   +S S  SS 
Sbjct: 61  VKSSEFYSPPPP-----SSTSAAASEITASRER-QSNVPSSSSSASTSGLSSSWSSSSSS 120

Query: 121 S--RNAILVSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLY 180
           +  RNAILVS+RQKGNPLLKHIRNV W FADVV DYLLGQ SCALYLSLRYHLLHPDYLY
Sbjct: 121 TQNRNAILVSHRQKGNPLLKHIRNVRWAFADVVCDYLLGQGSCALYLSLRYHLLHPDYLY 180

Query: 181 YRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKV 240
           YRIRELQKNFKL VVLCHVDVEDVVKPLLEVTKTALLHDCTLLC WSLEECGRYLETIKV
Sbjct: 181 YRIRELQKNFKLSVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKV 240

Query: 241 YENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARC 300
           YENKPAD+IQGQMDTDYLSRLTH LT+VRHVNKTDVVTLG  FGSLSHIMDASMEDLARC
Sbjct: 241 YENKPADIIQGQMDTDYLSRLTHALTTVRHVNKTDVVTLGNAFGSLSHIMDASMEDLARC 300

Query: 301 PGIGERKVRRLYDTFHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDV--DGKRKEDGS 360
           PGIGERKV+RLYD+FHEPFKRVV  +P VPET TQN+ E  S +E+++   +  R+++  
Sbjct: 301 PGIGERKVKRLYDSFHEPFKRVVPSYPAVPETSTQNNAEVGSANEDKEAKEEKDREKESK 360

Query: 361 QHKKEPELNIKSALSAAFAKYADKIGKSSSMPQEE 380
           + KKEP+L +KSALSAAF+KYADK+ K ++  Q E
Sbjct: 361 RRKKEPQLTVKSALSAAFSKYADKVRKKNNKSQGE 389

[Close]

BLAST of Cla000933 vs. TrEMBL
Match: V4SFR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001229mg PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 3.2e-144
Identity = 276/393 (70.23%), Postives = 303/393 (77.10%), Query Frame = 1


Query: 2   EEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPK------SQSFSQAFAFLKSSEFY 61
           E+ +E  K Q   NKK  KTII IPSYQEVI ++ P       SQSFSQAF+F+KSSEFY
Sbjct: 41  EQNNESAKAQPPQNKK--KTIITIPSYQEVINATNPPQNLFTPSQSFSQAFSFIKSSEFY 100

Query: 62  SPPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSV-SRNAIL 121
           +PPP P         PA    NP    Q  T S     +  T   S S   S+ SRNAIL
Sbjct: 101 NPPPPP---------PA----NPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAIL 160

Query: 122 VSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQK 181
           VS RQKGNPLLK+IRNV W FADVV DYL+GQ+SCALYLSLRYHLLHPDYLYYRIRELQK
Sbjct: 161 VSQRQKGNPLLKYIRNVRWAFADVVCDYLVGQNSCALYLSLRYHLLHPDYLYYRIRELQK 220

Query: 182 NFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADL 241
           NFKLR+VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADL
Sbjct: 221 NFKLRIVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADL 280

Query: 242 IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV 301
           IQGQMDTDYLSRLTH LTSVR VNKTDVVTLG+TFGSLSHIMDASMEDLARCPGIGERKV
Sbjct: 281 IQGQMDTDYLSRLTHALTSVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKV 340

Query: 302 RRLYDTFHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKRKEDGSQHKKEPELNI 361
           +RLYDTFHEPFKRVVS HP +PETP+Q   E  S++E  +V+   ++   + KKE E  +
Sbjct: 341 KRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETESTV 400

Query: 362 KSALSAAFAKYADKIGKSSSMPQEETGEPGSSN 388
           KSALSAAFAKYADKIGK  +    + GE   SN
Sbjct: 401 KSALSAAFAKYADKIGKKKNR-SSQVGETSVSN 417

[Close]

BLAST of Cla000933 vs. TrEMBL
Match: A0A059B7W6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04470 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 4.2e-144
Identity = 270/391 (69.05%), Postives = 309/391 (79.03%), Query Frame = 1


Query: 6   EEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQ---------SFSQAFAFLKSSEFYS 65
           E++ LQ+  N+   KT+IKIPSYQEV+ESSQ KS          SFSQAF+FLKSSEFYS
Sbjct: 9   EDDHLQRRPNRT--KTVIKIPSYQEVLESSQSKSAPPSLFTPSPSFSQAFSFLKSSEFYS 68

Query: 66  PPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVS 125
           PPP P    ++   PA+   +   +    T S + ++      +S S  ++ SRNAILVS
Sbjct: 69  PPPPPPPPPATPPPPAASAASAAAS----TWSVAGTSGAVAGSSSKSSFAAQSRNAILVS 128

Query: 126 NRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNF 185
            RQKGNPLLKHIRNV W FAD+V DYL+GQ+SCALYLSLRYHLLHPDYLYYRIRELQKN+
Sbjct: 129 PRQKGNPLLKHIRNVRWAFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNY 188

Query: 186 KLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQ 245
           KLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLC WSLEECGRYLETIKVYENKPAD+IQ
Sbjct: 189 KLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQ 248

Query: 246 GQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRR 305
           GQMDTDYLSRLTH LT+VRHVNKTDVVTLG+TFGSLSHIMDASMEDLARCPGIGERKVRR
Sbjct: 249 GQMDTDYLSRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVRR 308

Query: 306 LYDTFHEPFKRVV-SIHPVVPETPTQNSTEPRSMDEEQDVDGKRKEDGSQHKKEPELNIK 365
           LYDTFHEPFKRVV ++    PE P Q + EP S+ E+Q++     +   + KKEPEL +K
Sbjct: 309 LYDTFHEPFKRVVPNVAAAAPEAPVQKNAEPGSISEDQEIVDDVAQTSKRQKKEPELTVK 368

Query: 366 SALSAAFAKYADKIGKSSSMPQE-ETGEPGS 386
           SALSAAFAKYADKIGK ++ P +   GEP +
Sbjct: 369 SALSAAFAKYADKIGKRNTRPLDGRGGEPST 393

[Close]

BLAST of Cla000933 vs. NCBI nr
Match: gi|659126230|ref|XP_008463078.1| (PREDICTED: DNA excision repair protein ERCC-1 [Cucumis melo])

HSP 1 Score: 704.9 bits (1818), Expect = 7.8e-200
Identity = 359/389 (92.29%), Postives = 369/389 (94.86%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGS EE  QQT +KKSK TIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEENFQQTPHKKSK-TIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQK 120
           P S SSSQS PAS ITNPRKNDQLDTSSSSTSASTATP+NSLSV SSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNV W FADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD
Sbjct: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300

Query: 301 FHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKR-KEDGSQHKKEPELNIKSALS 360
           FHEPFKR+VS HP VPETPTQNST+PRS++EEQDVDGKR +EDGSQHKKEP+LN+KSALS
Sbjct: 301 FHEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIGKSSSMPQE-ETGEPGSSN 388
           AAFAKYADKI KSSSMPQE E GEP SSN
Sbjct: 361 AAFAKYADKIAKSSSMPQEKEIGEPESSN 388

[Close]

BLAST of Cla000933 vs. NCBI nr
Match: gi|449441216|ref|XP_004138378.1| (PREDICTED: DNA excision repair protein ERCC-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 689.9 bits (1779), Expect = 2.6e-195
Identity = 350/389 (89.97%), Postives = 360/389 (92.54%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGS E+  QQT   K  KTIIKIPSYQEVI+SSQP SQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQK 120
           P S SSSQS P S ITNPRKNDQLDTSSSSTSAS ATP+NSLSV SSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNV W FADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           +LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MD
Sbjct: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDT 300

Query: 301 FHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKR-KEDGSQHKKEPELNIKSALS 360
           FHEPFKRVVS HP VPETPTQ ST+PRS +EEQDVDGKR +EDGSQHKKEP+LN+KSALS
Sbjct: 301 FHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALS 360

Query: 361 AAFAKYADKIGKSSSMPQE-ETGEPGSSN 388
           AAFAKYADKI KS S+PQE E GEP SSN
Sbjct: 361 AAFAKYADKIAKSGSIPQEKEKGEPESSN 389

[Close]

BLAST of Cla000933 vs. NCBI nr
Match: gi|778709810|ref|XP_011656460.1| (PREDICTED: DNA excision repair protein ERCC-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 4.3e-150
Identity = 271/294 (92.18%), Postives = 275/294 (93.54%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGS E+  QQT   K  KTIIKIPSYQEVI+SSQP SQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQK 120
           P S SSSQS P S ITNPRKNDQLDTSSSSTSAS ATP+NSLSV SSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNV W FADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           +LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MD
Sbjct: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV 295
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKV 294

[Close]

BLAST of Cla000933 vs. NCBI nr
Match: gi|645222268|ref|XP_008246509.1| (PREDICTED: DNA excision repair protein ERCC-1 isoform X2 [Prunus mume])

HSP 1 Score: 538.5 bits (1386), Expect = 9.6e-150
Identity = 279/398 (70.10%), Postives = 315/398 (79.15%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKS---------QSFSQAFAFLKS 60
           ME+    +  +   NK  KKT+IKIPS+QEV+ESSQ KS         QSFSQAFAF+KS
Sbjct: 1   MEDEHGGQNTESDQNKNKKKTVIKIPSFQEVLESSQSKSTPQSLFTPSQSFSQAFAFVKS 60

Query: 61  SEFYSPPPKPFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVS-- 120
           SEFYSPPP P  A+SSQ   AS+  N  K  Q D  SSS       P N+++  SS +  
Sbjct: 61  SEFYSPPPPP--ATSSQPLQASDTGNSSKTGQSDVPSSSA------PTNAVASSSSPAQR 120

Query: 121 RNAILVSNRQKGNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 180
           RNAI+VS+RQKGNPLLKHIRNV W FAD+V DYLLGQSSCALYLSLRYHLLHPDYLYYRI
Sbjct: 121 RNAIIVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRI 180

Query: 181 RELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 240
           RELQKNFKLRVVLCH+DVEDVVKPLLEVTKTALLH+CTLLC WSLEECGRYLETIKVYEN
Sbjct: 181 RELQKNFKLRVVLCHIDVEDVVKPLLEVTKTALLHECTLLCGWSLEECGRYLETIKVYEN 240

Query: 241 KPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGI 300
           KPAD+IQGQMDTDYLSRL H LT+VRHVNKTDVVTLGTTFGSLSHIMD SMEDLARCPGI
Sbjct: 241 KPADIIQGQMDTDYLSRLNHALTTVRHVNKTDVVTLGTTFGSLSHIMDVSMEDLARCPGI 300

Query: 301 GERKVRRLYDTFHEPFKRVVSIHPVVPETPTQNSTEPRSMDEEQDVDGKRKEDGSQHKKE 360
           GERKV+RLYDTFHEPFKRVV+  P VPET   ++ EP S+DEE     + +++  + KKE
Sbjct: 301 GERKVKRLYDTFHEPFKRVVASRPAVPETSAPSNAEPGSVDEEDKEAEETEDESKRRKKE 360

Query: 361 PELNIKSALSAAFAKYADKIGKSSSMPQ-EETGEPGSS 387
           PEL +KSALS AF+KYADK+ K +S  Q EE GE  ++
Sbjct: 361 PELTVKSALSVAFSKYADKVNKKNSKTQREEKGETSAA 390

[Close]

BLAST of Cla000933 vs. NCBI nr
Match: gi|778709814|ref|XP_011656461.1| (PREDICTED: DNA excision repair protein ERCC-1 isoform X3 [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 2.8e-149
Identity = 270/297 (90.91%), Postives = 275/297 (92.59%), Query Frame = 1


Query: 1   MEEGSEEEKLQQTANKKSKKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPK 60
           MEEGS E+  QQT   K  KTIIKIPSYQEVI+SSQP SQSFSQAFAFLKSSEFYSPPPK
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 61  PFSASSSQSSPASEITNPRKNDQLDTSSSSTSASTATPINSLSVPSSVSRNAILVSNRQK 120
           P S SSSQS P S ITNPRKNDQLDTSSSSTSAS ATP+NSLSV SSVSRNAILVSNRQK
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQK 120

Query: 121 GNPLLKHIRNVTWTFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNV W FADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 121 GNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           +LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MD
Sbjct: 181 ILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMD 240

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRL 298
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Sbjct: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL 297

The following BLAST results are available for this feature:

BLAST of Cla000933 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERCC1_ARATH	3.8e-138	63.82	DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana GN=ERCC1 PE=2 SV=1	[more]
ERCC1_HUMAN	2.7e-67	45.19	DNA excision repair protein ERCC-1 OS=Homo sapiens GN=ERCC1 PE=1 SV=1	[more]
ERCC1_BOVIN	7.8e-67	46.73	DNA excision repair protein ERCC-1 OS=Bos taurus GN=ERCC1 PE=2 SV=1	[more]
ERCC1_MOUSE	8.6e-66	43.83	DNA excision repair protein ERCC-1 OS=Mus musculus GN=Ercc1 PE=2 SV=2	[more]
SWI10_SCHPO	1.6e-48	47.00	Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]

BLAST of Cla000933 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDK6_CUCSA	1.8e-195	89.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014860 PE=4 SV=1	[more]
M5VZH2_PRUPE	1.3e-148	69.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006720mg PE=4 SV=1	[more]
W9R7C9_9ROSA	5.0e-145	70.13	DNA excision repair protein ERCC-1 OS=Morus notabilis GN=L484_003710 PE=4 SV=1	[more]
V4SFR5_9ROSI	3.2e-144	70.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001229mg PE=4 SV=1	[more]
A0A059B7W6_EUCGR	4.2e-144	69.05	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04470 PE=4 SV=1	[more]

BLAST of Cla000933 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126230\|ref\|XP_008463078.1\|	7.8e-200	92.29	PREDICTED: DNA excision repair protein ERCC-1 [Cucumis melo]	[more]
gi\|449441216\|ref\|XP_004138378.1\|	2.6e-195	89.97	PREDICTED: DNA excision repair protein ERCC-1 isoform X1 [Cucumis sativus]	[more]
gi\|778709810\|ref\|XP_011656460.1\|	4.3e-150	92.18	PREDICTED: DNA excision repair protein ERCC-1 isoform X2 [Cucumis sativus]	[more]
gi\|645222268\|ref\|XP_008246509.1\|	9.6e-150	70.10	PREDICTED: DNA excision repair protein ERCC-1 isoform X2 [Prunus mume]	[more]
gi\|778709814\|ref\|XP_011656461.1\|	2.8e-149	90.91	PREDICTED: DNA excision repair protein ERCC-1 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004579	ERCC1/RAD10/SWI10
IPR010994	RuvA_2-like
IPR011335	Restrct_endonuc-II-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003684	damaged DNA binding
GO:0004519	endonuclease activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006308	DNA catabolic process
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0010213	non-photoreactive DNA repair
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006294	nucleotide-excision repair, preincision complex assembly
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0010224	response to UV-B
biological_process	GO:0006281	DNA repair
biological_process	GO:0009314	response to radiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0004519	endonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla000933	Cla000933.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004579	ERCC1/RAD10/SWI10 family	PRODOM	PD013585		coord: 111..235 score: 8.0
IPR004579	ERCC1/RAD10/SWI10 family	TIGRFAMs	TIGR00597	TIGR00597	coord: 111..222 score: 3.8
IPR010994	RuvA domain 2-like	unknown	SSF47781	RuvA domain 2-like	coord: 199..305 score: 1.62
IPR011335	Restriction endonuclease type II-like	unknown	SSF52980	Restriction endonuclease-like	coord: 111..237 score: 1.07
None	No IPR available	GENE3D	G3DSA:1.10.150.20		coord: 250..303 score: 9.4
None	No IPR available	PANTHER	PTHR12749	EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1	coord: 1..367 score: 5.5E
None	No IPR available	PFAM	PF03834	Rad10	coord: 113..225 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla000933	Cla97C08G146290	Watermelon (97103) v2	wmwmbB108
Cla000933	Csa6G014860	Cucumber (Chinese Long) v2	cuwmB475
Cla000933	MELO3C025022	Melon (DHL92) v3.5.1	mewmB312
Cla000933	ClCG08G002270	Watermelon (Charleston Gray)	wcgwmB410
Cla000933	CSPI06G02450	Wild cucumber (PI 183967)	cpiwmB490
Cla000933	Lsi08G002130	Bottle gourd (USVL1VR-Ls)	lsiwmB478
Cla000933	CsGy6G002490	Cucumber (Gy14) v2	cgybwmB446
Cla000933	MELO3C025022.2	Melon (DHL92) v3.6.1	medwmB299
Cla000933	CsaV3_6G002610	Cucumber (Chinese Long) v3	cucwmB501

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla000933	Wax gourd	wgowmB306
Cla000933	Cucumber (Gy14) v1	cgywmB656
Cla000933	Melon (DHL92) v3.5.1	mewmB305