Cla000877 (gene) Watermelon (97103) v1

Overview
NameCla000877
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCRS2-associated factor 1 (AHRD V1 ***- B6SWV8_MAIZE); contains Interpro domain(s) IPR001890 RNA-binding, CRM domain
LocationChr5 : 20217306 .. 20219138 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTCATTTTCGAAACCGGATCAGTTTTCCAGATTACTCGAACCAAAAACCCAGTGGCTATTTCTTCTTCATTTGCCGATTTATCTCCAAATCTCTGTCTGAAAGCACTGACGATCCTCCATTTTCTCCTATTTCCAAGCTCGGAAAGGCAAAGAAGAAGAAGACCCGCGATGGAAATTCGAATTCAAACGAAAACCCTACTCTCCCACTCCATTCGAAACTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTCAGTTAACCCTATAGGCTATCGAGAATCGCCCAAATTCTCACCGTTTGGACCGGGCCGGCTCGACCGGAAATGGACTGGAACTTCGGCCCCTGCAGAGGTGGAAGTGAAAATAATTGAAGTGTTAGAGGAGAGGAAACGGATTCTTGGAGACCCATTATCGGAGGAGGAAGTTGCAGAGCTTGTGGAACAGTATCGGCATAACAATTGCTCTCGGCAAATCAATCTTGGTAAATACTACATTAGTTGTACAACCATTCTGAAGGATTTTGTTTTTGTTATGTCTTCCAAATGTGAGATTAGTTGTTCTGTGCTATTATGAGAACTTGAATTCTGTTAATGGAGGAAATTGGGTGGTAGCTGTATGGTTGAATTCCTTTTCCTTATATATTTGTGACATTATATAGTGTTGTTCTTGTCTGTCATGATCATAAACTGTTGCTCAAAATTTTTTGAGATTGAAAAAGAAGTTTAAGTGGTTTGGTTTTGCATTTGGCTCAAATAGGAAAGGGGGGAGTTACTCATAATATGTTGGATGACATACACAACCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAATGCTTGGGAGTCCCAACTCTTGATATGGACAATATATGTTTCCACCTTGAGGTTTGATTCGTTTGAACTACATCCATTCCTCAAGTATCCAACATGATTCTGTCTTATTCTTTCTTTCAAGGTCAACTTTCACTACGAAAATACCTGATGTGAGCTATAGTTTCTTTCTAGGACAAGTCTGGTGGGAAGATTATATATCGACATATCAACATCCTTCTTTTATTCCGTGGTCGAAATTATGATCCCAAGAATCGACCAGCTATCCCTCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTAAAGAATGTGGCAGATGGCTTGTCATTTGATGAAACAAAGGAAATGAGAAACAGAGGATTGAATTCTCCTCCGCTAATGAAACTTAGTGAGTAAACTCCAGTGAACTATTCTTTTTCTTTTATATTATAGCTCATATTACATATATAATCTTTGTGATTGAACCTTTGTTTGATGTAGGCCTTCTTAAGATTTCATTATTGTCCTTTGCAATCCTTGTGCTTATGCTTAGGTTGGCTACACTCTTTATTTATTTACAAACTTTTTATGTGTTTGAGATATGAATTGTAAGATGGTGTTTGTAATTTTATGAGGCTGAATTTTACCTTCACATGTATTTTCTGTAGCAAGGAATGGTGTATATGTTAACGTCGTGGACAGAGTGAGAGAGGCCTTCGAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTGGCAGTGACTGCAAACAGATAGGTGTTAAATTAAGGGTAACTGTTAATGTTAAATTTGTTTCTTATCTAAAGATTGAAGCATAGAAGTCCGGTTGAAGTTGATTGGAAACTTTCGATCCTAAATTTCTTCTGCCAACAATCCAGGACTTGGTACCTTGTGTGCCCATTTTATTCAAGGATGAGCAGATTATTCTGTGGAGAGGGAAGAAAGATCATGAAGAGGACATGAACTCATAG

mRNA sequence

ATGGCGATTCATTTTCGAAACCGGATCAGTTTTCCAGATTACTCGAACCAAAAACCCAGTGGCTATTTCTTCTTCATTTGCCGATTTATCTCCAAATCTCTGTCTGAAAGCACTGACGATCCTCCATTTTCTCCTATTTCCAAGCTCGGAAAGGCAAAGAAGAAGAAGACCCGCGATGGAAATTCGAATTCAAACGAAAACCCTACTCTCCCACTCCATTCGAAACTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTCAGTTAACCCTATAGGCTATCGAGAATCGCCCAAATTCTCACCGTTTGGACCGGGCCGGCTCGACCGGAAATGGACTGGAACTTCGGCCCCTGCAGAGGTGGAAGTGAAAATAATTGAAGTGTTAGAGGAGAGGAAACGGATTCTTGGAGACCCATTATCGGAGGAGGAAGTTGCAGAGCTTGTGGAACAGTATCGGCATAACAATTGCTCTCGGCAAATCAATCTTGGAAAGGGGGGAGTTACTCATAATATGTTGGATGACATACACAACCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAATGCTTGGGAGTCCCAACTCTTGATATGGACAATATATGTTTCCACCTTGAGGACAAGTCTGGTGGGAAGATTATATATCGACATATCAACATCCTTCTTTTATTCCGTGGTCGAAATTATGATCCCAAGAATCGACCAGCTATCCCTCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTAAAGAATGTGGCAGATGGCTTGTCATTTGATGAAACAAAGGAAATGAGAAACAGAGGATTGAATTCTCCTCCGCTAATGAAACTTACAAGGAATGGTGTATATGTTAACGTCGTGGACAGAGTGAGAGAGGCCTTCGAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTGGCAGTGACTGCAAACAGATAGGTGTTAAATTAAGGGACTTGGTACCTTGTGTGCCCATTTTATTCAAGGATGAGCAGATTATTCTGTGGAGAGGGAAGAAAGATCATGAAGAGGACATGAACTCATAG

Coding sequence (CDS)

ATGGCGATTCATTTTCGAAACCGGATCAGTTTTCCAGATTACTCGAACCAAAAACCCAGTGGCTATTTCTTCTTCATTTGCCGATTTATCTCCAAATCTCTGTCTGAAAGCACTGACGATCCTCCATTTTCTCCTATTTCCAAGCTCGGAAAGGCAAAGAAGAAGAAGACCCGCGATGGAAATTCGAATTCAAACGAAAACCCTACTCTCCCACTCCATTCGAAACTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTCAGTTAACCCTATAGGCTATCGAGAATCGCCCAAATTCTCACCGTTTGGACCGGGCCGGCTCGACCGGAAATGGACTGGAACTTCGGCCCCTGCAGAGGTGGAAGTGAAAATAATTGAAGTGTTAGAGGAGAGGAAACGGATTCTTGGAGACCCATTATCGGAGGAGGAAGTTGCAGAGCTTGTGGAACAGTATCGGCATAACAATTGCTCTCGGCAAATCAATCTTGGAAAGGGGGGAGTTACTCATAATATGTTGGATGACATACACAACCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAATGCTTGGGAGTCCCAACTCTTGATATGGACAATATATGTTTCCACCTTGAGGACAAGTCTGGTGGGAAGATTATATATCGACATATCAACATCCTTCTTTTATTCCGTGGTCGAAATTATGATCCCAAGAATCGACCAGCTATCCCTCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTAAAGAATGTGGCAGATGGCTTGTCATTTGATGAAACAAAGGAAATGAGAAACAGAGGATTGAATTCTCCTCCGCTAATGAAACTTACAAGGAATGGTGTATATGTTAACGTCGTGGACAGAGTGAGAGAGGCCTTCGAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTGGCAGTGACTGCAAACAGATAGGTGTTAAATTAAGGGACTTGGTACCTTGTGTGCCCATTTTATTCAAGGATGAGCAGATTATTCTGTGGAGAGGGAAGAAAGATCATGAAGAGGACATGAACTCATAG

Protein sequence

MAIHFRNRISFPDYSNQKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS
Homology
[Close]
BLAST of Cla000877 vs. Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.0e-142
Identity = 237/344 (68.90%), Postives = 284/344 (82.56%), Query Frame = 1 

Query: 17  QKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTRDGNSNSNENPTL------ 76
           ++P   F F+C   ++ +S    DPPFSP+SK  K  K+K +      +++  L      
Sbjct: 12  KEPKDLFLFLCNLRARCVSTDDYDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKI 71

Query: 77  PLHSKLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEV 136
           P+ S LPFDF YSYSETNP + PIG+RE  +FSPFGPGRLDRKWTGT+A A  E+   + 
Sbjct: 72  PVISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALASPEIDQSQW 131

Query: 137 LEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRI 196
           +EER R+LG+ L+E+EV EL+E+YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRI
Sbjct: 132 VEERARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRI 191

Query: 197 KCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPI 256
           KCLGVPTLDMDNICFHLE+KSGGKI+YR+INIL+L+RGRNYDPK+RP IPLMLWKP+ PI
Sbjct: 192 KCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPI 251

Query: 257 YPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDC 316
           YP+LVKNVADGL F+ETKEMRNRGL+SP LMKLTRNGVYVNVV RVRE FE EE+VRLDC
Sbjct: 252 YPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDC 311

Query: 317 THVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDM 355
           THVG SDCK+IGVKL+++VPCVPILFKDEQIILWRGK+  EE++
Sbjct: 312 THVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGKRTGEEEL 355

[Close]
BLAST of Cla000877 vs. Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 476.1 bits (1224), Expect = 3.4e-133
Identity = 227/324 (70.06%), Postives = 264/324 (81.48%), Query Frame = 1 

Query: 35  SESTDDPPFSPISKL---GKAKKKKTRDGNSNSNENPTLPLHSKLPFDFFYSYSETNPSV 94
           S+  DDPPF+ +++      +KKKK  + +      P  P  S LPFDF YSYSET+P+ 
Sbjct: 35  SDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFRYSYSETDPAW 94

Query: 95  NPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERKRILGDPLSEEEVAELV 154
            PIG+RE  +FSPFGPGRLDR W G +A A            R+ +LG+PL+EEEVA+LV
Sbjct: 95  RPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGAGAAATSREEVLGEPLAEEEVAQLV 154

Query: 155 EQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKS 214
           E+YRH++CSRQINLGKGGVTHNM+DDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDK+
Sbjct: 155 ERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKT 214

Query: 215 GGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFDETKEMR 274
           GGK+IYR+INIL+L+RGRNYDPK RP IPLMLWKP APIYP+LV+NVADGL+F++TKE+R
Sbjct: 215 GGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPRLVQNVADGLTFEKTKELR 274

Query: 275 NRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGSDCKQIGVKLRDLVPC 334
           N GLNS PLMKLTRNGVYVNVVDRVREAF+  EVVRLDC+HVG SDCK+IGVKLRDLVPC
Sbjct: 275 NTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPC 334

Query: 335 VPILFKDEQIILWRGKKDHEEDMN 356
           VP+LFKDEQIILWRGK   E  ++
Sbjct: 335 VPLLFKDEQIILWRGKVKQENSVS 358

[Close]
BLAST of Cla000877 vs. Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.5e-90
Identity = 174/333 (52.25%), Postives = 225/333 (67.57%), Query Frame = 1 

Query: 35  SESTDDPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKLPFDFFYSYSETNPSVNPI 94
           S ++++P F+   K    KK K +    +S E     +HS LPFDF +SY+E+  +V PI
Sbjct: 45  SSASENPDFN--QKNNNKKKPKPQYRPPSSLEG-VKTVHSDLPFDFRFSYTESCSNVRPI 104

Query: 95  GYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEV-------LEERKR-----ILGDPL 154
           G RE PK+SPFGP RLDR+WTG  APA V  K+  V       LEE++R     I G  L
Sbjct: 105 GLRE-PKYSPFGPDRLDREWTGVCAPA-VNPKVESVDGVEDPKLEEKRRKVREKIQGASL 164

Query: 155 SEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN 214
           +E E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK AEAVR+KCLGVPTLDM N
Sbjct: 165 TEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKN 224

Query: 215 ICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGL 274
           + FHLEDK+ G+++ +H   L+L+RGRNYDPK RP IPLMLWKP+ P+YP+L+K   DGL
Sbjct: 225 VIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGL 284

Query: 275 SFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGSDCKQIG 334
           S DETK MR +GL  P L KL +NG Y ++V  VR+AF   E+VR+DC  +   D K+IG
Sbjct: 285 SIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIG 344

Query: 335 VKLRDLVPCVPILFKDEQIILWRGK--KDHEED 354
            KLRDLVPC+ + F  EQ+++WRGK  K  +ED
Sbjct: 345 AKLRDLVPCILVTFDKEQVVIWRGKDYKPPKED 372

[Close]
BLAST of Cla000877 vs. Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 5.6e-88
Identity = 166/323 (51.39%), Postives = 214/323 (66.25%), Query Frame = 1 

Query: 41  PPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKLPFDFFYSYSETNPSVNPIGYRESP 100
           PP+ P S L +  +   R               S LPFDF +SY+E++P   PIG RE P
Sbjct: 56  PPYRPPSSLDRGGRPAAR---------------SDLPFDFRFSYTESSPGDKPIGLRE-P 115

Query: 101 KFSPFGPGRLDRKWTGTSAPA---------------EVEVKIIEVLE-ERKRILGDPLSE 160
           K+SPFGPGRLDR WTG  APA                 E ++ E    ER+R+LG+PL+ 
Sbjct: 116 KYSPFGPGRLDRPWTGLCAPAVDTTLRDAHADDPAPAAERELEEARRRERERVLGEPLTP 175

Query: 161 EEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIC 220
            E A LV + + +   +QINLG+ G+THNML+DIHNHWK  EAVR+KCLGVPT+DM N+C
Sbjct: 176 AERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVC 235

Query: 221 FHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSF 280
             LEDK+GG II+RH   L+L+RGR+Y+PK RP IPLMLWKP  P+YP+L+K   +GL+ 
Sbjct: 236 HQLEDKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKPAEPVYPRLIKTTIEGLTV 295

Query: 281 DETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGSDCKQIGVK 340
           +ETKEMR +GL  P L KL +NG Y ++V  VR+AF  +E+VR+D   +  SD ++IGVK
Sbjct: 296 EETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVK 355

Query: 341 LRDLVPCVPILFKDEQIILWRGK 348
           LRDLVPC+ + F  EQII+WRGK
Sbjct: 356 LRDLVPCIIVSFDKEQIIVWRGK 362

[Close]
BLAST of Cla000877 vs. Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.3e-73
Identity = 152/347 (43.80%), Postives = 208/347 (59.94%), Query Frame = 1 

Query: 37  STDDPPFSPISKLGKAKKKKTRD------GNSNSNENPTLPLHSKLPFDFFYSYSETNPS 96
           +T  P FS  ++ G+AKK    D      G   ++   +  L    PF+F YSY+E  P 
Sbjct: 47  ATSHPAFSAAAR-GRAKKIPIADTDEPAAGVRVTDRGISYRLDGA-PFEFQYSYTEA-PR 106

Query: 97  VNPIGYRESPKFSPFGPGRLDRKWTGTS-------------------------APAEVEV 156
             P+  RE+P F PFGP    R WTG                            P +   
Sbjct: 107 ARPVALREAP-FMPFGPEATPRPWTGRKPLPKSRKELPEFDSFVLPAPGKKGVKPVQSPG 166

Query: 157 KIIEVLE------ERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIH 216
             +  +E       R+ ILG+PL++EEV+ELV+    +   RQ+N+G+ G+THNML++IH
Sbjct: 167 PFLAGMEPRYQSVSREDILGEPLTKEEVSELVKGSLKSK--RQLNMGRDGLTHNMLENIH 226

Query: 217 NHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAI 276
           +HWKR    +IKC GV T+DMDNIC  LE+K GGK+I+R   ++ LFRGRNY+ + RP  
Sbjct: 227 SHWKRKRVCKIKCKGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPCF 286

Query: 277 PLMLWKPYAPIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREA 336
           PLMLWKP AP+YP+LV  V  GL+ DE  EMR RG   PP+ KL +NGVY N+V++VREA
Sbjct: 287 PLMLWKPVAPVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREA 346

Query: 337 FEFEEVVRLDCTHVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRG 347
           FE  ++VR+DC+ +  SDC++IG KL+DLVPC+ + F+ E I++WRG
Sbjct: 347 FEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRG 387

[Close]
BLAST of Cla000877 vs. TrEMBL
Match: A0A0A0LD46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G417680 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 2.1e-190
Identity = 327/358 (91.34%), Postives = 339/358 (94.69%), Query Frame = 1 

Query: 1   MAIHFRNRISFPDYSNQKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTR-- 60
           MAIHFR RI FPD+SN KPSGYFFFI RFISKSLSEST DPPFSP+SKL KAKKKK +  
Sbjct: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKEKAH 60

Query: 61  DGNSNSNENPTLPLHSKLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTS 120
            GNSNSNENPTLPL S LPFDFFYSYSETNP V+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  GGNSNSNENPTLPLKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APAEVEVKIIEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDI 180
           AP+ VEV I EVLEERKRILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPA 240
           HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLL+RGRNYDPKNRPA
Sbjct: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSFDETKEMR+RGLNSPPLMKLTRNGVYVNVVDRVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300

Query: 301 AFEFEEVVRLDCTHVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS 357
           AF+FEEVVRLDCTHVG SDCKQIGVKLRDLVPCVPILFK+EQIILWRGKKDHEEDMNS
Sbjct: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 358

[Close]
BLAST of Cla000877 vs. TrEMBL
Match: M5X2D1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019693mg PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 2.2e-155
Identity = 259/337 (76.85%), Postives = 298/337 (88.43%), Query Frame = 1 

Query: 19  PSGYFFFICRFISKSLSEST--DDPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKL 78
           P+  F  + RF+S SLSE    DDPPFSP+SK  K KK KT++ + ++   PT PL S L
Sbjct: 19  PAKPFSSLSRFLSHSLSEDQYEDDPPFSPVSKPPKPKKNKTQNKDPDTKNEPTRPLKSDL 78

Query: 79  PFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERKR 138
           PFDF YSYSETNP V PI +RESPKFSPFGPGRLDRKWTGT AP + EV +  V EER R
Sbjct: 79  PFDFSYSYSETNPKVEPIAFRESPKFSPFGPGRLDRKWTGTVAPTQQEVDLNRVAEERIR 138

Query: 139 ILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198
           +LGDPL+EEEVA+LVE+YRH++C+RQIN+GKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Sbjct: 139 VLGDPLTEEEVAKLVERYRHSDCARQINMGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198

Query: 199 TLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVK 258
           TLDMDN+CFHLEDKSGGKI+Y+HIN+L+L+RGRNYDPKNRP IP+MLWKPY PIYPKLVK
Sbjct: 199 TLDMDNVCFHLEDKSGGKIVYQHINVLILYRGRNYDPKNRPVIPVMLWKPYTPIYPKLVK 258

Query: 259 NVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGS 318
           NVADGL+F+ETKE+RNRGLNSPP+MKLTRNGVYVNVVDR+REAF+ EEVVRLDCTHVG S
Sbjct: 259 NVADGLTFEETKELRNRGLNSPPVMKLTRNGVYVNVVDRIREAFKTEEVVRLDCTHVGTS 318

Query: 319 DCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEED 354
           DCK+IGVKLRDLVPC+P+LFKDEQI+LWRGK+D E+D
Sbjct: 319 DCKRIGVKLRDLVPCIPLLFKDEQIVLWRGKRDQEQD 355

[Close]
BLAST of Cla000877 vs. TrEMBL
Match: B9SAE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0585650 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.3e-149
Identity = 260/338 (76.92%), Postives = 293/338 (86.69%), Query Frame = 1 

Query: 19  PSGY-FFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTRDGNSNSNEN--PTLPLHSK 78
           P+ Y F +   F+S +LSE   DPPF+  SK  KAKK  T    SN N N  P LPL S 
Sbjct: 60  PASYPFNYFTYFLSHTLSEDLYDPPFTLASK-PKAKKAPTNQPGSNENPNKDPKLPLKSD 119

Query: 79  LPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERK 138
           LPFDF YSYSE++ ++ PIGYRE  +FSPFGPGRLDRKWTG +AP + EV +  V+EER+
Sbjct: 120 LPFDFRYSYSESDSAIQPIGYREPKRFSPFGPGRLDRKWTGVAAPVQSEVDMEIVMEERR 179

Query: 139 RILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGV 198
           R+LGDPL+EEEV ELVE+YRH++CSRQINLGKGGVTHNMLDDIHNHWK+AEAVRIKCLGV
Sbjct: 180 RVLGDPLTEEEVEELVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKKAEAVRIKCLGV 239

Query: 199 PTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLV 258
           PTLDMDN+CFHLEDKSGGKIIYRHINILLL+RGRNYDPKNRP IP+MLWKPYAPI+PKLV
Sbjct: 240 PTLDMDNVCFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPVIPIMLWKPYAPIFPKLV 299

Query: 259 KNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGG 318
           KNVADGLSF+ETKE+RNRGLNSP LMKLTRNGVYV VV+RVREAF+ EEVVRLDCTHVG 
Sbjct: 300 KNVADGLSFEETKEIRNRGLNSPALMKLTRNGVYVYVVERVREAFQTEEVVRLDCTHVGS 359

Query: 319 SDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEED 354
           SDCK+IGVKLRDLVPCVPILFKDEQIILWRGK+D E++
Sbjct: 360 SDCKKIGVKLRDLVPCVPILFKDEQIILWRGKRDQEQN 396

[Close]
BLAST of Cla000877 vs. TrEMBL
Match: A0A067KVT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00865 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 2.2e-147
Identity = 259/343 (75.51%), Postives = 291/343 (84.84%), Query Frame = 1 

Query: 12  PDYSNQKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTRDG---NSNSNENP 71
           P YS   P  YFF   RF+S++LS+   DPPF+   K     KK T++G     N N++P
Sbjct: 17  PKYS---PFIYFF---RFLSQTLSQDPYDPPFTLACK----PKKTTKEGPQTKENPNKDP 76

Query: 72  TLPLHSKLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKII 131
            LP  S LPFDF YSYSE+NP V PIGYRE  +FSPFGPGRLDRKWTGT+AP + EV + 
Sbjct: 77  KLPQKSDLPFDFRYSYSESNPGVEPIGYREPKRFSPFGPGRLDRKWTGTAAPFQAEVDME 136

Query: 132 EVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAV 191
           +++EER R+LGDPL+EEE   LVE+YRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAV
Sbjct: 137 KIMEERNRVLGDPLTEEEAEYLVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAV 196

Query: 192 RIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYA 251
           RIKCLGVPTLDMDN+CFHLEDKSGGKIIYRHINILLL+RGRNYDPK+R  IP+MLWKPYA
Sbjct: 197 RIKCLGVPTLDMDNVCFHLEDKSGGKIIYRHINILLLYRGRNYDPKSRTVIPVMLWKPYA 256

Query: 252 PIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRL 311
           PIYPKLVKNVADGL+F+ETKEMRNRGLNSP LMKLTRNGVYVNVV+RVREA   EEVVRL
Sbjct: 257 PIYPKLVKNVADGLTFEETKEMRNRGLNSPALMKLTRNGVYVNVVERVREALRAEEVVRL 316

Query: 312 DCTHVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHE 352
           DCTHVG SDCK+IGVKLRDLVPCVPILFKDEQIILW+GK+D E
Sbjct: 317 DCTHVGTSDCKKIGVKLRDLVPCVPILFKDEQIILWKGKRDEE 349

[Close]
BLAST of Cla000877 vs. TrEMBL
Match: U5GUK8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44960g PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 6.4e-147
Identity = 249/335 (74.33%), Postives = 289/335 (86.27%), Query Frame = 1 

Query: 17  QKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKL 76
           Q P     ++  F++ +LS+   DPPFS ++K  K K         + N +P LP+ S L
Sbjct: 15  QNPKSKSLYVSYFLNHTLSQDQYDPPFS-LTKKPKPKNTTEPKETPDPNNDPKLPVKSDL 74

Query: 77  PFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERKR 136
            FDF YSYSE+NP++ PIGYRE  +FSPFGPGRLDRKWTGT+AP ++E  + +++EER R
Sbjct: 75  AFDFRYSYSESNPAIEPIGYREPKRFSPFGPGRLDRKWTGTAAPTQLETDMDKLMEERNR 134

Query: 137 ILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 196
           +LGDPL+EEEVAELVE+YRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Sbjct: 135 VLGDPLTEEEVAELVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 194

Query: 197 TLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVK 256
           TLDMDN+CFHLEDKSGGK++YR+INILLL+RGRNYDP+NRP IPLMLWKPYAPIYPKLVK
Sbjct: 195 TLDMDNVCFHLEDKSGGKVVYRNINILLLYRGRNYDPENRPVIPLMLWKPYAPIYPKLVK 254

Query: 257 NVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGS 316
           NVADGL+F+ETKEMRNRGLNS PLMKLTRNGVYVNVVDRVR+AFE EEVVRLDC HVG S
Sbjct: 255 NVADGLTFEETKEMRNRGLNSLPLMKLTRNGVYVNVVDRVRDAFETEEVVRLDCKHVGMS 314

Query: 317 DCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHE 352
           DCK+IGVKL+DLVPCVPILFKDEQIILWRGK++ E
Sbjct: 315 DCKKIGVKLKDLVPCVPILFKDEQIILWRGKRNQE 348

[Close]
BLAST of Cla000877 vs. NCBI nr
Match: gi|659109116|ref|XP_008454555.1| (PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis melo])

HSP 1 Score: 678.3 bits (1749), Expect = 7.1e-192
Identity = 330/357 (92.44%), Postives = 340/357 (95.24%), Query Frame = 1 

Query: 1   MAIHFRNRISFPDYSNQKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKK-TRD 60
           MAIHFR RI FPD SNQKPSGYFFFI RFISKSLSEST DPPFSP+SKL KAKKKK    
Sbjct: 1   MAIHFRTRIRFPDRSNQKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKKAHG 60

Query: 61  GNSNSNENPTLPLHSKLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSA 120
           GNSNSNENPTLPL S LPFDFFYSYSETNP VNPIGYRESPKFSPFGPGRLDRKWTGTSA
Sbjct: 61  GNSNSNENPTLPLKSYLPFDFFYSYSETNPLVNPIGYRESPKFSPFGPGRLDRKWTGTSA 120

Query: 121 PAEVEVKIIEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIH 180
           P+ VEV I EVLEERKRILGDPLS+EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDIH
Sbjct: 121 PSAVEVNINEVLEERKRILGDPLSDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIH 180

Query: 181 NHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAI 240
           NHWKRAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYR+INILLL+RGRNYDPKNRPAI
Sbjct: 181 NHWKRAEAVRIKCLGVPTLDMENICFHLEDKSGGKIIYRYINILLLYRGRNYDPKNRPAI 240

Query: 241 PLMLWKPYAPIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREA 300
           PLMLWKPYAPIYPKLVKNVADGLSFDETKEMR+RGLNSPPLMKLTRNGVYVNVVDRVREA
Sbjct: 241 PLMLWKPYAPIYPKLVKNVADGLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREA 300

Query: 301 FEFEEVVRLDCTHVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS 357
           F+FEEVVRLDCTHVG SDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS
Sbjct: 301 FKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS 357

[Close]
BLAST of Cla000877 vs. NCBI nr
Match: gi|449468496|ref|XP_004151957.1| (PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 672.9 bits (1735), Expect = 3.0e-190
Identity = 327/358 (91.34%), Postives = 339/358 (94.69%), Query Frame = 1 

Query: 1   MAIHFRNRISFPDYSNQKPSGYFFFICRFISKSLSESTDDPPFSPISKLGKAKKKKTR-- 60
           MAIHFR RI FPD+SN KPSGYFFFI RFISKSLSEST DPPFSP+SKL KAKKKK +  
Sbjct: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKEKAH 60

Query: 61  DGNSNSNENPTLPLHSKLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTS 120
            GNSNSNENPTLPL S LPFDFFYSYSETNP V+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  GGNSNSNENPTLPLKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APAEVEVKIIEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDI 180
           AP+ VEV I EVLEERKRILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPA 240
           HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLL+RGRNYDPKNRPA
Sbjct: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSFDETKEMR+RGLNSPPLMKLTRNGVYVNVVDRVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300

Query: 301 AFEFEEVVRLDCTHVGGSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS 357
           AF+FEEVVRLDCTHVG SDCKQIGVKLRDLVPCVPILFK+EQIILWRGKKDHEEDMNS
Sbjct: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 358

[Close]
BLAST of Cla000877 vs. NCBI nr
Match: gi|595912829|ref|XP_007214494.1| (hypothetical protein PRUPE_ppa019693mg [Prunus persica])

HSP 1 Score: 556.6 bits (1433), Expect = 3.1e-155
Identity = 259/337 (76.85%), Postives = 298/337 (88.43%), Query Frame = 1 

Query: 19  PSGYFFFICRFISKSLSEST--DDPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKL 78
           P+  F  + RF+S SLSE    DDPPFSP+SK  K KK KT++ + ++   PT PL S L
Sbjct: 19  PAKPFSSLSRFLSHSLSEDQYEDDPPFSPVSKPPKPKKNKTQNKDPDTKNEPTRPLKSDL 78

Query: 79  PFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERKR 138
           PFDF YSYSETNP V PI +RESPKFSPFGPGRLDRKWTGT AP + EV +  V EER R
Sbjct: 79  PFDFSYSYSETNPKVEPIAFRESPKFSPFGPGRLDRKWTGTVAPTQQEVDLNRVAEERIR 138

Query: 139 ILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198
           +LGDPL+EEEVA+LVE+YRH++C+RQIN+GKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Sbjct: 139 VLGDPLTEEEVAKLVERYRHSDCARQINMGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198

Query: 199 TLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVK 258
           TLDMDN+CFHLEDKSGGKI+Y+HIN+L+L+RGRNYDPKNRP IP+MLWKPY PIYPKLVK
Sbjct: 199 TLDMDNVCFHLEDKSGGKIVYQHINVLILYRGRNYDPKNRPVIPVMLWKPYTPIYPKLVK 258

Query: 259 NVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGS 318
           NVADGL+F+ETKE+RNRGLNSPP+MKLTRNGVYVNVVDR+REAF+ EEVVRLDCTHVG S
Sbjct: 259 NVADGLTFEETKELRNRGLNSPPVMKLTRNGVYVNVVDRIREAFKTEEVVRLDCTHVGTS 318

Query: 319 DCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEED 354
           DCK+IGVKLRDLVPC+P+LFKDEQI+LWRGK+D E+D
Sbjct: 319 DCKRIGVKLRDLVPCIPLLFKDEQIVLWRGKRDQEQD 355

[Close]
BLAST of Cla000877 vs. NCBI nr
Match: gi|645241108|ref|XP_008226924.1| (PREDICTED: CRS2-associated factor 2, mitochondrial [Prunus mume])

HSP 1 Score: 556.2 bits (1432), Expect = 4.1e-155
Identity = 260/338 (76.92%), Postives = 298/338 (88.17%), Query Frame = 1 

Query: 19  PSGYFFFICRFISKSLSEST---DDPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSK 78
           P+  F  + RF+S SLSE     DDPPFSP+SK  K KK KT++ + ++   PT PL S 
Sbjct: 19  PAKPFISLSRFLSHSLSEDQYEDDDPPFSPVSKPPKPKKNKTQNKDPDTKNEPTRPLKSD 78

Query: 79  LPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERK 138
           LPFDF YSYSETNP V PI +RESPKFSPFGPGRLDRKWTGT A  + EV +  V+EERK
Sbjct: 79  LPFDFSYSYSETNPKVEPIAFRESPKFSPFGPGRLDRKWTGTVALTQQEVDLNRVVEERK 138

Query: 139 RILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGV 198
           R+LGDPL+EEEVA+LVE+YRH++C+RQIN+GKGGVTHNMLDDIHNHWKRAEAVRIKCLGV
Sbjct: 139 RVLGDPLTEEEVAKLVERYRHSDCARQINMGKGGVTHNMLDDIHNHWKRAEAVRIKCLGV 198

Query: 199 PTLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLV 258
           PTLDMDN+CFHLEDKSGGKI+Y+HIN+L+L+RGRNYDPKNRP IP+MLWKPY PIYPKLV
Sbjct: 199 PTLDMDNVCFHLEDKSGGKIVYQHINVLILYRGRNYDPKNRPVIPVMLWKPYTPIYPKLV 258

Query: 259 KNVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGG 318
           KNVADGL+F+ETKE+RNRGLNSPP+MKLTRNGVYVNVVDRVREAF+ EEVVRLDCTHVG 
Sbjct: 259 KNVADGLTFEETKELRNRGLNSPPVMKLTRNGVYVNVVDRVREAFKTEEVVRLDCTHVGT 318

Query: 319 SDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEED 354
           SDCK+IGVKLRDLVPC+P+LFKDEQI+LWRGK+D E D
Sbjct: 319 SDCKRIGVKLRDLVPCIPLLFKDEQIVLWRGKRDQEAD 356

[Close]
BLAST of Cla000877 vs. NCBI nr
Match: gi|694322670|ref|XP_009352444.1| (PREDICTED: CRS2-associated factor 2, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 545.0 bits (1403), Expect = 9.4e-152
Identity = 258/337 (76.56%), Postives = 293/337 (86.94%), Query Frame = 1 

Query: 19  PSGYFFFICRFISKSLSESTD--DPPFSPISKLGKAKKKKTRDGNSNSNENPTLPLHSKL 78
           P+  F  + R +S+SL+E     DPPFSP+SK  K KK KT+D   +   +PT PL S L
Sbjct: 19  PTKPFLSLSRRLSQSLTEDPYEYDPPFSPVSKTPKPKKTKTQDKTPDPKNDPTRPLKSDL 78

Query: 79  PFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIIEVLEERKR 138
           PFDF YSYSETNP+V PI +RESPKFSPFGPGRLDRKWTGT A  + EV +  V EERKR
Sbjct: 79  PFDFSYSYSETNPAVEPIAFRESPKFSPFGPGRLDRKWTGTVAAVQQEVDLDRVAEERKR 138

Query: 139 ILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198
           +LGDPL+EEEVAELVE+YRH++C+RQIN+GKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Sbjct: 139 VLGDPLAEEEVAELVERYRHSDCARQINMGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198

Query: 199 TLDMDNICFHLEDKSGGKIIYRHINILLLFRGRNYDPKNRPAIPLMLWKPYAPIYPKLVK 258
           TLDMDN+CFHLEDKSGGKI+YRHIN+L+L+RGRNYDPKNRP IP+MLWKPY PIYPKLVK
Sbjct: 199 TLDMDNVCFHLEDKSGGKIVYRHINVLILYRGRNYDPKNRPVIPVMLWKPYPPIYPKLVK 258

Query: 259 NVADGLSFDETKEMRNRGLNSPPLMKLTRNGVYVNVVDRVREAFEFEEVVRLDCTHVGGS 318
           NVADGL+F+ TKE+RN GLNS PLMKLTRNGVYVNVVDRVREAF  EEVVRLDCTHVG S
Sbjct: 259 NVADGLTFEGTKELRNIGLNSLPLMKLTRNGVYVNVVDRVREAFNTEEVVRLDCTHVGTS 318

Query: 319 DCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEED 354
           DCK+IGVKLRDLVPC+P+LFKDEQIILWRGK+D ++D
Sbjct: 319 DCKRIGVKLRDLVPCIPLLFKDEQIILWRGKRDQKQD 355

The following BLAST results are available for this feature:
BLAST of Cla000877 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF2M_ARATH4.0e-14268.90CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=... [more]
CAF2M_ORYSJ3.4e-13370.06CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g... [more]
CAF1M_ARATH3.5e-9052.25CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=... [more]
CAF1M_ORYSJ5.6e-8851.39CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g... [more]
CAF1P_MAIZE2.3e-7343.80CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1[more]
BLAST of Cla000877 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD46_CUCSA2.1e-19091.34Uncharacterized protein OS=Cucumis sativus GN=Csa_3G417680 PE=4 SV=1[more]
M5X2D1_PRUPE2.2e-15576.85Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019693mg PE=4 SV=1[more]
B9SAE8_RICCO2.3e-14976.92Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0585650 PE=4 SV=1[more]
A0A067KVT7_JATCU2.2e-14775.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00865 PE=4 SV=1[more]
U5GUK8_POPTR6.4e-14774.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44960g PE=4 SV=1[more]
BLAST of Cla000877 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109116|ref|XP_008454555.1|7.1e-19292.44PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis melo][more]
gi|449468496|ref|XP_004151957.1|3.0e-19091.34PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis sativus][more]
gi|595912829|ref|XP_007214494.1|3.1e-15576.85hypothetical protein PRUPE_ppa019693mg [Prunus persica][more]
gi|645241108|ref|XP_008226924.1|4.1e-15576.92PREDICTED: CRS2-associated factor 2, mitochondrial [Prunus mume][more]
gi|694322670|ref|XP_009352444.1|9.4e-15276.56PREDICTED: CRS2-associated factor 2, mitochondrial-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001890RNA-binding_CRM
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU41307watermelon EST collection version 2.0transcribed_cluster
WMU56458watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla000877Cla000877.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU41307WMU41307transcribed_cluster
WMU56458WMU56458transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainGENE3DG3DSA:3.30.110.60coord: 262..352
score: 6.5E-13coord: 142..236
score: 3.6
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 265..345
score: 1.9E-11coord: 142..227
score: 6.6
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 262..345
score: 1.1E-11coord: 142..227
score: 1.5
IPR001890RNA-binding, CRM domainPROFILEPS51295CRMcoord: 260..356
score: 15.987coord: 140..238
score: 18
IPR001890RNA-binding, CRM domainunknownSSF75471YhbY-likecoord: 262..350
score: 5.1E-19coord: 141..236
score: 9.68
NoneNo IPR availablePANTHERPTHR31846FAMILY NOT NAMEDcoord: 25..354
score: 4.6E
NoneNo IPR availablePANTHERPTHR31846:SF3CRS2-ASSOCIATED FACTOR 2, MITOCHONDRIALcoord: 25..354
score: 4.6E