Cla000872 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla000872
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	1-deoxy-D-xylulose 5-phosphate synthase (AHRD V1 ***- A9ZN07_HEVBR); contains Interpro domain(s) IPR005477 Deoxyxylulose-5-phosphate synthase
Location	Chr10 : 9731221 .. 9742192 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATCTATCGCTTCAGGTAGTAAAGTTAGGGTATTTTAAAGTTTGTTTTCGAACTTCAATGGTCTATTTTTTTTTTGTTTATCTAGTTTTTGTAATATATAATTGATGGACCAATAAAAAAAAAAGAACGTAACGTGGACACAAAATTAAAAAGTTTTGAAATATCGATCTTATACCATCTAAATAATTTAAAAACTTTTTAAAATACAAGAATAGAATGAATAATTGGTTAAATAAATGTTAATAGTACCTCCCTAATACGGGTGTTTAACATATGGCCGAAAATAGACCTGACCAATTGAAATTGACCAAACCGATGTCGATTGGTTGATTTTGTGGAGTGCTCGGTCGACGTTGGTTTTTCTATATACAAAATCTGACTGGTCGATTGATCTGAGTGGTCGATAATTAAATTTTTGATTGATCTACCAACCTTCATATATAAGGGTTCGAAAATTAAAAAAATAAAATAAAAGAAGAAAAAGAGTTGTTGACAGCAACAATAACTCACAGCAGTTGTTACACTACACAATTCTCAGTCTTCTTTTAAGAAAAAAAGAAAAAAGAAAAAGGAAAAATAACAACCCTAATTAAGAGTTTCAATAATCTTTTTAAAATTTCAAAAACTTCACAAATACTTTACAGTCAGTTTTAAATAGAAAAAATTAGTATTTTGTTTCAAAAATATAAATCCTTAAAACTTTTTAAAAGTTATAAAAAATACTCTTACCGTAAAACTTGAAAACCATTACACATTATTTTTATATTAATATCTTTAAGCTCTTTGAAAAGTTTTTAAAATGTTGTTTTATTGTTAGCATAGTCAATTTTTTTTGTACCTATCTTGGGTTAGTATGAAGCAATTTGAAATCAATATATAGATCCCTTATTTTTTTTTTCCCATATATATTCTCTCATTTTGATAGCCTGTCCAATTATTACACCAATTTTCTTAGTAACCAAATAGAACTCCAAAATTTTAATTTAAAACATAAAATTCTACAATATCTTTAAAAGCCTCAATATCAAATTATCTCCTTAAAATTGAACAAGACAAGGAATTGCAAAATTAAAAAATAAAAAATAAAAAATAAGTTGACAAAAGGATATCTTCTTCGATCACGAGAAATATTCTTAACTGATCACAATAAATAAACTAATTTGAACTACAAAAATGATGAAGAAACGTCTTCATTGCTACAAGTAGTAGTAGTACCATTATTCCCTATTGTCTTGGTATAGCCTCCCATATATACCTTAATTGATGGAGGTAGTCTTAGATATTGGATATTAATTAATCCAATTTCAATTCCTCTTTCTCTTTCTTTCATTTCTCCCCTGCGATTCTTTTTGGAGTTTTATTTGTTATTTTGATTTTCCCCTCTCTGCTATTCTCACCCCACTTTCTGATCGGTGGACCGTGGTCGCCATCTGAGTTTGACCCCAAAACTGACTCTAAACGACCCACACTACCCTACTTCCTAATCTTTCAAAAGTTTTAATTTCAAGAATTAAAATATAAGAATTTTAAAATAGCCATTTTCTAAAGTTTGTCATTTGTTTCAATAACAACATTTTAACGAGAAAGCATTATAGTTTTTTGACGCAATGGAAATATGAAGTATATAATGACATTAGGGTATAGTTTTTTCAATTAATTTTAATACTTTATCGCAATAAGAACTTCAATAGCATTATATAAGAAATGGAATTGACACATTTGAATTAAATATACAAGCGTAGAAAAGAAAGGGAAGAGAATGAAGAAAGTAAAAAGTTATAATTTGATGAGAATTCAGGATGTTGAAGAACTTGCAGCAGAAGTTCGAGAAGAAATCGTGTATTCAGTTTCAAAATCAGGTGGCCATTTAGGTTCAAACTTGGGAACTGTTGAGCTCACTGTCGCATTGCATTACGTCTTCAATGCACCTCAAGACAAGATCGTATGGGACGTCGGCCATCAGGTACCTCAAAACAAATTAACAAACAATTAATTCTTAATTCTCATTTTTGTTTTTTGTTTTTTGTTTTTGTTAAACAATATCATATTAAATTTGCCTTCTTGGGCATTCTCAGATGTTTGAATTACCATTATTTAAAAAAAATTTTTTTTTTTAAAAAAAAAAAAAAAAAAAGGCTTATGCTCATAAGATTCTTACGGGGAGGAGGAGTAGAATGCAAACAATAAGGAAGGCTGGGGGACTCTCAGGTTTTCCAAGAAGGGATGAGAGTGTTTATGATACTTTTGGTGCAGGACACAGCTCTACAAGCATATCAGCTGCTCTTGGTACCTTTTTTTAAAACCTTTAAATTACTACTTCACTTTTAAAATCTATTTAATAGTTTCCGGTTCAAATCTCCGATAATCCATATTAACGATGATAGTGAACTAATTTATCCTATCAAAATAATGTATCAAGTCTAATTCAATTTTCTAACGAAATGAAAAAAATTAAATAAAAAACATTCTAACCTTCAGATTTTTTGCTTGGGTAAGAGAGGCTCCGACTCTCGACTTCAGGATAATTTAGAAACTAAACTTTGAGATCAATGCGCTAGCCAACTGCACCACCCCCAATTTTGATCTTTAATCTTAAAACTTGTTAATATAATAGGTCTTTTGATTTATATTCAAAATTTTGAGAAATTTAACCCATCAAGATTTGAATTAGGTTTTATGTGTAATAGAACTATAAACTACAATTTTAATGAATGCTGAGTAGGTCAAGACCTTATTAGATGGAATCTATGGACATATTAGATACAAAAGTTAAAAATTTAAAGTTTTATTATGTACAACGATTTATTAGTTATTAGACACAATTAAAAATTGAAAGATAATTAAATTCCAACGCACAAATTTGAAAATTTTTTATAGACCTATTAATTTTTTTTTTTTTTTTACCATTTTAGAACTTTAAAAATAGTACGTTAAACAACTAAGCTGGATATTTTAAGAAATAAAGAATGAAGCTAACTTTCTGCACAATATAGTTGGGGAAGTTAAAGAATTTATTATAAAGTATTTATATAAGGTTGACTTTATTTGGATTTGATTGTGTATTTAAGAAAGAAAAAAAAAATCAGATTGTGTATCTCCCTAAACTGCAGTTTTGATTAACCGCCTCAACACATAACTAAATTTCTAAATAAAAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGCCATTTTGGTTGCCAAATTGCCGAATTGCCCATTTTTTCATTCATAGGATTGACTCAAAAAAAATCATTTTTATATAATTTTTTTTATAAAAAGTGTTTAAAATACACTCCAAAATTTAAATTTTGAATGGTTGCTAAACGCTTTAATTTTTCTAGAATGACTCAATTTTAAGTTAAACATTTGAAAATGTATTCTAAATGCAACTTTAATCTCAAAACGTAACTTTTTCTGTCTACGATTCAGTCTTATTACTAATATTATTTCCCTCTCTTACCTCAACCCAACAGAAAAATACGTATAGGTTGGACTGTACTATTTTTGCGGAGCCTATCTAATTGCCTAATTTGTTACATGGTAAATAATATTATTTTTTTAAACAAAATCGAATTATTAATTTTCTACGTACTAATAAGTAGGTTGTATGGGGATAGGCAGTATGCTGCACCTAATTAATCATTCCCCAACTCAAAATCTCTTTCCCAACTCAAAATCTCTTTTAACCGAAATCTTGGACAAGATTCTCCATGGTACATACTTTTTTGTTGCTCAATTAAAATTTTTCATCATGTGGCAAGTAATTTTGTTTTTTTTTTTTTTTAAAAAAGAATTAATTGCTATTTTTTTTTTGTGTAATTAGAAAGATTGTACGAAAATAAGTGGAACCTAAGTTGCATCTAATCATAAAAGAAAAAGAAAGAGTCATGTGCTATATTTTTTAAATTTAATAACCCATCTTGTAACATCATTGACGTATTAGATCAATAATAAACCCTAAATTAAATTAGACTTAAACTATATAAACTAAACAATAATTTATTAATAACTACCAAGTGTATGTTTGCTAGTCTTTGGGGTATAATGAAAATGCTACGAATGTGTCAACCTAGTTTTAATATCTAGGTGCACTCTCCTTCTTACGTTATTAAAAAAAAAAAAAAAAACAGAGAGAGAGTGGCATGTATATATGTTTTTAAGATGACTAATTTTGCAAAGTTTTATTCACCTAAAAAAAAGGCATGGCAATTGCAAGGGATTTACAAGGAGAAGAAAACAACGTAGTTTCAGTGATAGGAGATGGAGCCATGACGGCCGGACAAGCATATGAGGCCATGAACAATGCAGGCTATCTCAATGCCAACCTCATCATCATCCTCAACGACAACGCCCAAGTTTCTCTCCCGACCGCCACCCTCGACGGTCCAGCACCCCCGGTAGGAGCCCTCAGTGCTGCGTTAGCAGAGCTCCGACAACGAAGTTCTGTGCGAGCAACAAAGGTAAAATTAAGGAGAAAGGCTTTCAATAATTAAGTTGCCCTTAGGGCAGCTGGAGTATATATGTCTGCTGGTTTTTGTAAGATGATCTCTTAGACCACTTGCTGATAGTATGTTAAATTATGGATTGACTTAAAAGCATAAACTAATAAGACAAATTTAATATTATGTAACAGTTTTTGCATATGTTATGGTGAACACAGGTGAAAAAGAATAGGGGGTGTTTGTTTGGAGATCTTGGTTTAGAGTATGTGGGTCCAGTGGATGGCCATAATGTGAGAGAATTGGTGGCCACTTTTAAAGATGTGAAGGAAAGGTGTAATAATAATAATAATAAGGGTCCAGTTTTGATTCATGTCTTTACCCAAAAGGGAAAGGGCTATCCTCCAGCTGAGGCTGCACATGATAAAATGCATGGTATGTTTATTATATTATTCTATTAATTTATCTTAACGATTTTTAAATTTCGCACCTTAGTTGTTGTTTTCCATTTTCCCTAATTTTACCCCAGCTTGGATATTTTTTATTATCTTAAATTTATGGGAAATTCTTTTAAATAGCAATAATTGTCACTTAAAATATTTATAAATAATAGCAAAATATCACCGTTTATCTGTGATATATTGCGATATATCGTGATATGTGTCTATTCGTATAGGTGTCTATCATGACACACAGATAGACATATCGCAAATAGCCGAAAATTTATTATATTTATAAATATTTTAGTTCATTTTTCTATATTTAAAAATAACTCTAAACATATTTTATAAATTTTTAATCATTTTATGATAATTTTATCTATATCATAAAGGATTTGTCAAATTATAAGATTTAAACGAGCTTTTGAGTTTTTCAAATCACCAACTTATTTAATTTATTATCAACTTCTTCAGTTTGTAAATTTCCTAAGGAAGAAAAATCTGCATTTTGTTATAAAAAAAAAAACTCGATTGAAATTATATGGTAAAATTTCTCCTTACATGGTTGCCATGTTACGACAATCAATACTAATGTAGAAGGAAATCATGGACCCTGTCCATGATTTCTTTCTTTTTTTTTTTTCTTGTTTGGTTTTCTTACCTGAGTAATTATCAAAAACAATGGTTGTTTTCCAATTTTTCCTTTTGTGTCCTTCCCCTCACTCCATCATCTCCGGTTTTTAAAGAGAGGTTTTTTTTTTTTTTTTTTTTTTAATGTTGTCTGATAAATGTAGTTTTTTTTCTTTTTTTTTGGTTATGTTTATAAAACATGCCCATAATATGAAAAATAATTAATATTATATTTCCAATTTACAGCAAATAATCACTCACTCAATAATAGAAAATATCTCATCAATTAAATTAGTAAAAGATAAGGAAAGATATACATAATTATCTCCTTGAATTTATTAATAACTTAAACTATGCAAATCTCATCTTAATATAGAAATAATTTGATATCAAGGAGGAGACATTCAAAAGGAAATAACAATTATTTTGACTAATTAATTTTGAAAGAGAGAATAAAAGATATTAGGGTGATCCAAAAAGAGAAACAAAAATAATGTCAATTTTGTGAGTCTCTCTCCATTTCTCTTTCTTTAATTATTTTGTGTTCAACCAAAATATTATTGTTGTATTTATTCAATTTCTTTTTTTATTGTTAAAGTGAAAAACAAAACTAAACATAAAAAGCTAAATAGGAGAAAGAAAAAAAAAAGAGGCAAACTCGTGTACCCTGTCCACAAGTTCTGTCCACGATTTCCTTTAGAAACTCGTGCATCCTGTACACGATTTTGTCACCTATTTTTGTCAATACTTTCCACCTAACACTAAATGAGACATATTTTTCAATTGTCATATTATTTTTAGAAAACATTTTCCCTAACACCTTATTTTTGTCATTTAAAAAAAAACTATATTATTTATGAAGTTAACCATATAAACTGTATACTAAGTCCATGCTAAATATTAAAAAATTTAAAATTTTGAATTAATATGATGACATTTTAAAAAAATAGCGTTTAAATTCTGTTTTAGTTAATGATCTATGAAAATATGTTAATTGGTTTAAATATTATAAATATTGACAAATATAGCAAAATGTCATTATCTATCTGTGATAGATAATGATAGACACTAAAAGACACTAATAGCCATCTATTAGTAATAGACACTGTTGATGATAAACATGACATTTTTGCTATTTTTATAAATATTTTGGCGCATTTTGTTAAATTTGAAAACAACCCTTCAAAATATCTAATTTTATTTTTAATATTTTAAAATGTTTATTTTAAATTTCAAATTAAGAAATAAGTAACCATTTTAACTCATTACAATTATTTTTTGATCTAATATACTTGTTTAAGCTAATACATGCTTAGCACGTTAATAGGTATGCTCTCTTCCACGTTTTTCTATTTCACGAAAGAAAGCTATGGTTTTTTTCTTTTCTATTTCAACGCAATATTTAAAAGTGAGATGATTTAAAACTCTAACTTCCTAAGTTATATATATTTAATAATTGAGTTATGGTCAAGTTCTTTAAGAATGAAAATACAATCCCATCTAATAACCATTTGATCTTTTGTTTTTTAAATTTGTGTCCATATTTCAACAAGTTCTCAAGAAAAATTCTAGTACTATATATGAGTACCATACTTCATTTATTCACACTATATAATTATCTTTCATAAAAATTAGTGGGTTCATATTAATGTTAAGGAATATGAAATATTTTACATACTCCCATGACACTAGAAAATTTTCCAAATTTCTCAATCATGGTTTCGTCTTTCCTAAGTAAACATTTATACTTTTAGTTAAATTCCTAAAAACAAAAACAAGTTTTTAAATTTCCGCTAATTTGGTAACACAATTTTGTTTTTAATTGTCAGATTTTGAAATTTATGCTTATTATCTAGCTCATTATTTCTTAAGTATGGTTCCCATATCGCTTAAAGAAACATTTGAGTTCTTAGTCAAAATTTAAAAAATGAAAACTAATTGACAAAAAACTAGTTTTTATTTTAAATTTGGACTAAAACATTTTACAATATTTTTGTAACAAAGATGAAAATTGGGGTAGGAAAATATGAGAAGAACCATTATTTTAAAGAAAAAAAAAAACAAAATGGTTATTAAGGGAGATTTATGATCTTGAAAACAATCATAAAATGTAGACATGGAAACAAAAAGAGCCATAGAGATAGCTTTATAGAGATGAAAACAAAAAGAGCCATAGAGATATGTAATACTATTTATAGGGTTAATTTTAAAAAACCAAAAAGGTATGCTACGTATTTGTTGAAATCAGTTGAAACGAAAAATAATAAAGATGAATAATTTCAGGAGTGGTGGAGTTTGAGGCAAAAACAGGGAAGCAGGTGAAGAAGAGCAAATCCGGAACACGGCTCTCATACAGTCAATACTTTGCAGAGTCACTGATAAAAGAAGCTGAATGCGACGACAGGATTGTCGGAATCCATGCCGCGATGGGGGCCGGAACAGCACTTAATCACTTCCACAAGCGCTTTCCCGATCGCTGCTTTGACGTCGGCATTGCTGAGCAGCACGCCGTCAGTTTTGCGGCGGGGTTGGCTGCTCAGGGAATGAAGCCCTTTTGCTCCGTTTACTCCACTTTCCTTCAACGGGCTTTTGATCAGGTTCCTTACCTAAAAATTTAAGTAATTTTTTAAAACTTAAAAGTACCTTTTAGATTTATTTATTTATTTATTTAAAATTTGGCTGGCTTTGAATTTACTTAGGAAGATAAAAATTATGGCAGGGAAGTTTGGGCCCGTAAAATTTTTAAAAATAAAATTGTTACCAAATTGAGTGATCTATTTGTTTCTTGTTAAGCAATGATTTGGTGCCACCTAATTTTTAGGCTCCTCCCTCTTAGATAAAATAATAATAATAATAATAATAATAATAAATAAATAAATAATTTTGTTTTAAAAATGCTACATGACAATATTACATTGGGTAACTAACCTAGGCTGCACAAAAATAGGTACAACCTAGACAACACCTAAGTTTTCCTCTTTTTGGTTTTTCAAATTTGACTTGCTTTTAATAATATTAGTAGAGAGCATGTAGAAAAAAAAAAACGATAAAAATGTAATGTTTATAAGCTTAATTAAAAAAAAAAAAAATTTCAAAAGAAAAAAATACAAAATCTCGAATGTCTATAAAACAAAACCTTGGATCTTTCTATTACAATTGCTACCTAACTTTCGATATAAAAGTAATTTGTTAAACTACTACTGTTAACATATTGATATATAACTTATCAAAGCGCTTCAAATTTAAGCATTTTGAGTTGATTGTCTAATGTTCAACTTTATATGTCAATGAAAAGTTTAAAAATTTATTGGATGCTATATATTACACACATAAGAACCTTATAAATTCATGGATTAAAATTATAATGTGAATCAATAAATAGGTTGATTTTTTCTTTCTTTTTTTGTCTTAGAATTAGGTTAAAATTCTTATTTGGTCTCCAAACTTCAAATTTTGACAATCAAAACTTTTTAAGTAAATTTTGTTTGTTGATATCTTTTGTTAATTTATTAGATGGAAAGAGATGTACAGGTCAACTACCATTCAAACTTACTCTTTTTCTTTTCTTTTCTTTTTTTCTCTTTTTTTTTTCTTACGAATTTAGAGAAAAAAAAAATATATATTTTTTTTTGTTGATTTGATGAAAATTTTATAGTAGGAACTAATTGAAATAATTTTCTTATAAAAGGTTTAGAAATTAAACGAAGAAAATTTTGAAATTAAAGTTTGGATACTAAAATAGATAACTAGGATTAAATTTATCCAATAATGTTTCCTTTATTGTGCCTCTCTAAATTTGAGGTTGTCAAAAAACAATGTAGGTACATGATGTAGACCTTCAGAAATTACCAGTTCGGTTTGTGGTGGATCGGGCGGGTTTAGCGGGTCCTGAAGGCCCGACCCATTGTGGAGCATTTGATATTCTATATACTTCTTGTTTGTCCAACATGATCGTGATGGCACCGTCTGATGAAGCTGAACTTATTCACATGGTGGCCACAGCAATCGCCATTGATGACAGACCCAGCTGCTTCAGGTTTCCAAAGGGCAATGGAATTGGAGCACTTCTCCCTCTCAATTACAAAGGAACCCCACTTGAGGTTAGACCCTTCAACAAACTATATAATATGTTTAAATCACCAAAACCAAAATGGGTTATATGGTTTTGATAAATCATCAAAATTCAACTAACAAAATACTTTCGCAAAACCAAGCCACCAAAAACACGAGTTGAACTGTTGAAACTAAAGGTTGGTCAAAATGGTTGTTGTGACATGGAAATAACCATTACCTTGAAAGCAATTGTGGCAAGTTCTCGTTAGTGCTAATTATCTTACATTAGTTATTCTCAAGATTAACACAACATGCTTGACAGATGATCACTCACCAGAAAAGAGTTGAAATCAAAAGGGAACTTTTGCTCAGATTAGTTTCTAATAAGAATAAAAAAAGGGAAGAAGAAAATCGTATTTCTTTCTAGAACTTGTTTAGCACTTTTGGAGAGAAGACAAAAAGAAAAAAAAAAAAAAAAAAGGCATCTTTTCTATAGACATAGGTCCACAAAATAAGAAAACGTTCCATATCCTTAGAGAAAATGAATTGATGTAATTAAAAAAAATTAAGACGGTTTTAATAAAAATAGCAAAAGATACTTTTTGACCAGTCATTTTCTATAATGACAAGTCCTTCCCAACCGGAATGTGGAAAAAAAAAACTGCTAGTAATAGGAGTCGTGTATAATTTTTAGCATTGGTTGAATTTTGAAAATGGAATATATATTTTTGGCAAAATGTGGTTATTGTGGTTGATGTTCTGAACTTTTGAGTAGATTGGAAAGGGTAGGGTATTGATGGAAGGCAATAGTGTTGCTCTCTTGGGGTATGGAACAATAGTTCAACAATGTCTTGAAGCTGCTAGAATGCTGAAAACTCAAGGTGTTTCGACGACGGTTGCAGATGCAAGATTTTGCAAGCCTCTCGACTCGAAACTCATCAAACGTTTAGCTAAGGAGCATGATATCCTTATTACTGTAGAGGAGGGTTCAATAGGAGGCTTTGGATCACACGTTTCACAATTCTTTAGCTTAACTGGAGTCCTAGATGGACCCCTTAAGGTAATTATTTTGAGAATTCTCAACATTAATTTGAAATGACTTTTTCAACTTTCCAATTGTAATTTGGAACTTATGACCTTGCAGTTTAGGGCTATGGTACTTCCAGATAAATACATTGAGCAAGGATTGCCTCACCACCAGCTAGAGGAAGCTGGCTTGTCTTCTATGCATATTGTTTCATTGGTACTATCTCTTCTTGGGACACCAAAAGAAGGTTTATGGACCAAATAG

mRNA sequence

ATGAAGAATCTATCGCTTCAGGATGTTGAAGAACTTGCAGCAGAAGTTCGAGAAGAAATCGTGTATTCAGTTTCAAAATCAGGTGGCCATTTAGGTTCAAACTTGGGAACTGTTGAGCTCACTGTCGCATTGCATTACGTCTTCAATGCACCTCAAGACAAGATCGTATGGGACGTCGGCCATCAGGCTTATGCTCATAAGATTCTTACGGGGAGGAGGAGTAGAATGCAAACAATAAGGAAGGCTGGGGGACTCTCAGGTTTTCCAAGAAGGGATGAGAGTGTTTATGATACTTTTGGTGCAGGACACAGCTCTACAAGCATATCAGCTGCTCTTGGCATGGCAATTGCAAGGGATTTACAAGGAGAAGAAAACAACGTAGTTTCAGTGATAGGAGATGGAGCCATGACGGCCGGACAAGCATATGAGGCCATGAACAATGCAGGCTATCTCAATGCCAACCTCATCATCATCCTCAACGACAACGCCCAAGTTTCTCTCCCGACCGCCACCCTCGACGGTCCAGCACCCCCGGTAGGAGCCCTCAGTGCTGCGTTAGCAGAGCTCCGACAACGAAGTTCTGTGCGAGCAACAAAGGTGAAAAAGAATAGGGGGTGTTTGTTTGGAGATCTTGGTTTAGAGTATGTGGGTCCAGTGGATGGCCATAATGTGAGAGAATTGGTGGCCACTTTTAAAGATGTGAAGGAAAGGTGTAATAATAATAATAATAAGGGTCCAGTTTTGATTCATGTCTTTACCCAAAAGGGAAAGGGCTATCCTCCAGCTGAGGCTGCACATGATAAAATGCATGGAGTGGTGGAGTTTGAGGCAAAAACAGGGAAGCAGGTGAAGAAGAGCAAATCCGGAACACGGCTCTCATACAGTCAATACTTTGCAGAGTCACTGATAAAAGAAGCTGAATGCGACGACAGGATTGTCGGAATCCATGCCGCGATGGGGGCCGGAACAGCACTTAATCACTTCCACAAGCGCTTTCCCGATCGCTGCTTTGACGTCGGCATTGCTGAGCAGCACGCCGTCAGTTTTGCGGCGGGGTTGGCTGCTCAGGGAATGAAGCCCTTTTGCTCCGTTTACTCCACTTTCCTTCAACGGGCTTTTGATCAGGTACATGATGTAGACCTTCAGAAATTACCAGTTCGGTTTGTGGTGGATCGGGCGGGTTTAGCGGGTCCTGAAGGCCCGACCCATTGTGGAGCATTTGATATTCTATATACTTCTTGTTTGTCCAACATGATCGTGATGGCACCGTCTGATGAAGCTGAACTTATTCACATGGTGGCCACAGCAATCGCCATTGATGACAGACCCAGCTGCTTCAGGTTTCCAAAGGGCAATGGAATTGGAGCACTTCTCCCTCTCAATTACAAAGGAACCCCACTTGAGATTGGAAAGGGTAGGGTATTGATGGAAGGCAATAGTGTTGCTCTCTTGGGGTATGGAACAATAGTTCAACAATGTCTTGAAGCTGCTAGAATGCTGAAAACTCAAGGTGTTTCGACGACGGTTGCAGATGCAAGATTTTGCAAGCCTCTCGACTCGAAACTCATCAAACGTTTAGCTAAGGAGCATGATATCCTTATTACTGTAGAGGAGGGTTCAATAGGAGGCTTTGGATCACACGTTTCACAATTCTTTAGCTTAACTGGAGTCCTAGATGGACCCCTTAAGTTTAGGGCTATGGTACTTCCAGATAAATACATTGAGCAAGGATTGCCTCACCACCAGCTAGAGGAAGCTGGCTTGTCTTCTATGCATATTGTTTCATTGGTACTATCTCTTCTTGGGACACCAAAAGAAGGTTTATGGACCAAATAG

Coding sequence (CDS)

ATGAAGAATCTATCGCTTCAGGATGTTGAAGAACTTGCAGCAGAAGTTCGAGAAGAAATCGTGTATTCAGTTTCAAAATCAGGTGGCCATTTAGGTTCAAACTTGGGAACTGTTGAGCTCACTGTCGCATTGCATTACGTCTTCAATGCACCTCAAGACAAGATCGTATGGGACGTCGGCCATCAGGCTTATGCTCATAAGATTCTTACGGGGAGGAGGAGTAGAATGCAAACAATAAGGAAGGCTGGGGGACTCTCAGGTTTTCCAAGAAGGGATGAGAGTGTTTATGATACTTTTGGTGCAGGACACAGCTCTACAAGCATATCAGCTGCTCTTGGCATGGCAATTGCAAGGGATTTACAAGGAGAAGAAAACAACGTAGTTTCAGTGATAGGAGATGGAGCCATGACGGCCGGACAAGCATATGAGGCCATGAACAATGCAGGCTATCTCAATGCCAACCTCATCATCATCCTCAACGACAACGCCCAAGTTTCTCTCCCGACCGCCACCCTCGACGGTCCAGCACCCCCGGTAGGAGCCCTCAGTGCTGCGTTAGCAGAGCTCCGACAACGAAGTTCTGTGCGAGCAACAAAGGTGAAAAAGAATAGGGGGTGTTTGTTTGGAGATCTTGGTTTAGAGTATGTGGGTCCAGTGGATGGCCATAATGTGAGAGAATTGGTGGCCACTTTTAAAGATGTGAAGGAAAGGTGTAATAATAATAATAATAAGGGTCCAGTTTTGATTCATGTCTTTACCCAAAAGGGAAAGGGCTATCCTCCAGCTGAGGCTGCACATGATAAAATGCATGGAGTGGTGGAGTTTGAGGCAAAAACAGGGAAGCAGGTGAAGAAGAGCAAATCCGGAACACGGCTCTCATACAGTCAATACTTTGCAGAGTCACTGATAAAAGAAGCTGAATGCGACGACAGGATTGTCGGAATCCATGCCGCGATGGGGGCCGGAACAGCACTTAATCACTTCCACAAGCGCTTTCCCGATCGCTGCTTTGACGTCGGCATTGCTGAGCAGCACGCCGTCAGTTTTGCGGCGGGGTTGGCTGCTCAGGGAATGAAGCCCTTTTGCTCCGTTTACTCCACTTTCCTTCAACGGGCTTTTGATCAGGTACATGATGTAGACCTTCAGAAATTACCAGTTCGGTTTGTGGTGGATCGGGCGGGTTTAGCGGGTCCTGAAGGCCCGACCCATTGTGGAGCATTTGATATTCTATATACTTCTTGTTTGTCCAACATGATCGTGATGGCACCGTCTGATGAAGCTGAACTTATTCACATGGTGGCCACAGCAATCGCCATTGATGACAGACCCAGCTGCTTCAGGTTTCCAAAGGGCAATGGAATTGGAGCACTTCTCCCTCTCAATTACAAAGGAACCCCACTTGAGATTGGAAAGGGTAGGGTATTGATGGAAGGCAATAGTGTTGCTCTCTTGGGGTATGGAACAATAGTTCAACAATGTCTTGAAGCTGCTAGAATGCTGAAAACTCAAGGTGTTTCGACGACGGTTGCAGATGCAAGATTTTGCAAGCCTCTCGACTCGAAACTCATCAAACGTTTAGCTAAGGAGCATGATATCCTTATTACTGTAGAGGAGGGTTCAATAGGAGGCTTTGGATCACACGTTTCACAATTCTTTAGCTTAACTGGAGTCCTAGATGGACCCCTTAAGTTTAGGGCTATGGTACTTCCAGATAAATACATTGAGCAAGGATTGCCTCACCACCAGCTAGAGGAAGCTGGCTTGTCTTCTATGCATATTGTTTCATTGGTACTATCTCTTCTTGGGACACCAAAAGAAGGTTTATGGACCAAATAG

Protein sequence

MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVGHQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDLQGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVGALSAALAELRQRSSVRATKVKKNRGCLFGDLGLEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGVVEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRFPDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQVHDVDLQKLPVRFVVDRAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKGNGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVADARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPDKYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGLWTK

Homology

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BLAST of Cla000872 vs. Swiss-Prot
Match: DXS2_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 5.8e-250
Identity = 428/637 (67.19%), Postives = 516/637 (81.00%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS  ++E+LAAE+R EIV++VSK+GGHL S+LG VEL VALH+VF+ P+DKI+WDVG
Sbjct: 80  MKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVELAVALHHVFDTPEDKIIWDVG 139

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRSRM TIR+  GL+GFP+RDES +D FGAGHSSTSISAALGMA+ARDL
Sbjct: 140 HQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDL 199

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G++N+V+SVIGDGAMTAGQAYEAMNN+GYL++N+I++LNDN QVSLPTATLDGPA PVG
Sbjct: 200 LGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVG 259

Query: 181 ALSAALAELRQRSSVRATK----------------------------VKKNRGCLFGDLG 240
           ALS AL +L+  + +R  +                            V  +   LF +LG
Sbjct: 260 ALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELG 319

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGH+V +LVA F  VK    +    GPVL+H+ T+KGKGYPPAEAA D+MHGV
Sbjct: 320 LYYIGPVDGHSVDDLVAIFNKVK----SMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGV 379

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+  TG+Q  KSK  T LSY+QYFAE+LI+EAE DD++VGIHAAMG GT LN+FHKRF
Sbjct: 380 VKFDPTTGRQF-KSKCST-LSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRF 439

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQ-VHDVDLQKLPVRFVVD 420
           P+RCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQ VHDVDLQ+LPVRF +D
Sbjct: 440 PERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMD 499

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFD+ Y +CL NM+VMAP+DEAEL+HMVATA AIDDRPSCFRFP+G
Sbjct: 500 RAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRG 559

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIGA+LP N+KGTPLE+GKGRVL+ GN VALLGYGT+VQ C++AA  LK  G+  TVAD
Sbjct: 560 NGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACMKAAEALKEHGIYVTVAD 619

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD+ LI+ LA EH++L+TVEEGSIGGFGSHV+ + SL+G+LDGPLK R+M LPD
Sbjct: 620 ARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSLSGLLDGPLKLRSMFLPD 679

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QLEEAGL+  HI + VLSLLG P E L
Sbjct: 680 RYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPLEAL 710

[Close]

BLAST of Cla000872 vs. Swiss-Prot
Match: DXS1_ORYSJ (1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2)

HSP 1 Score: 823.5 bits (2126), Expect = 1.5e-237
Identity = 409/637 (64.21%), Postives = 497/637 (78.02%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLSL+++++LA E+R ++++ VSK+GGHLGS+LG VELTVALHYVFN PQDKI+WDVG
Sbjct: 82  MKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKILWDVG 141

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQ+Y HKILTGRR +M T+R+  GLSGF +R ES YD+FG GHSST+ISAALGMA+ RDL
Sbjct: 142 HQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDL 201

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
           +G +NNVV+VIGDGAMTAGQAYEAMNNAGYL++++I+ILNDN QVSLPTATLDGPAPPVG
Sbjct: 202 KGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVG 261

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS+AL++L+    +R     A  V K  G                        LF +LG
Sbjct: 262 ALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELG 321

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHN+ +L+   ++VK    +    GPVLIHV T+KG+GYP AE A DK HGV
Sbjct: 322 LYYIGPVDGHNIDDLITILREVK----STKTTGPVLIHVVTEKGRGYPYAERAADKYHGV 381

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
            +F+  TGKQ K       LSY+ YFAE+LI EAE D+R+V IHAAMG GT LN+F +RF
Sbjct: 382 AKFDPATGKQFKSPAK--TLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRF 441

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           P+RCFDVGIAEQHAV+FAAGLA +G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 442 PNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMD 501

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFD+ Y +CL NM+VMAPSDEAEL HMVATA AIDDRPSCFR+P+G
Sbjct: 502 RAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRG 561

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG  LP NYKG PLE+GKGRVL+EG  VALLGYG+ VQ CL AA +++  G+  TVAD
Sbjct: 562 NGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVAD 621

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD  LI+RLA  H++L+TVEEGSIGGFGSHV+QF +L G+LDG LK+R +VLPD
Sbjct: 622 ARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPD 681

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QL EAGL+  HI + V ++LG  +E L
Sbjct: 682 RYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREAL 712

[Close]

BLAST of Cla000872 vs. Swiss-Prot
Match: DXS_ARATH (1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=DXS PE=1 SV=2)

HSP 1 Score: 810.8 bits (2093), Expect = 9.9e-234
Identity = 402/638 (63.01%), Postives = 495/638 (77.59%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS++++++L+ E+R +++++VSK+GGHLGS+LG VELTVALHY+FN PQDKI+WDVG
Sbjct: 86  MKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVG 145

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQ+Y HKILTGRR +M T+R+  GLSGF +R ES +D FG GHSST+ISA LGMA+ RDL
Sbjct: 146 HQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDL 205

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
           +G+ NNVV+VIGDGAMTAGQAYEAMNNAGYL++++I+ILNDN QVSLPTATLDGP+PPVG
Sbjct: 206 KGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVG 265

Query: 181 ALSAALAELRQRSSVR--------------------ATKVKK--------NRGCLFGDLG 240
           ALS+AL+ L+   ++R                    A KV +            LF +LG
Sbjct: 266 ALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELG 325

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHN+ +LVA  K+VK    +    GPVLIHV T+KG+GYP AE A DK HGV
Sbjct: 326 LYYIGPVDGHNIDDLVAILKEVK----STRTTGPVLIHVVTEKGRGYPYAERADDKYHGV 385

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+  TG+Q K +      SY+ YFAE+L+ EAE D  +V IHAAMG GT LN F +RF
Sbjct: 386 VKFDPATGRQFKTTNK--TQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRF 445

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQ-VHDVDLQKLPVRFVVD 420
           P RCFDVGIAEQHAV+FAAGLA +G+KPFC++YS+F+QRA+DQ VHDVDLQKLPVRF +D
Sbjct: 446 PTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMD 505

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFD+ + +CL NMIVMAPSDEA+L +MVATA+AIDDRPSCFR+P+G
Sbjct: 506 RAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRG 565

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG  LP   KG P+EIGKGR+L EG  VALLGYG+ VQ CL AA ML+ +G++ TVAD
Sbjct: 566 NGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVAD 625

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD  LI+ LAK H++LITVEEGSIGGFGSHV QF +L G+LDG LK+R MVLPD
Sbjct: 626 ARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPD 685

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGLW 610
           +YI+ G P  QL EAGL   HI +  L+L+G P+E L+
Sbjct: 686 RYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREALF 717

[Close]

BLAST of Cla000872 vs. Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 2.1e-231
Identity = 398/637 (62.48%), Postives = 491/637 (77.08%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLSL+++++LA E+R + +++VSK+GGHLGS+LG VELTVALHYVFNAPQD+I+WDVG
Sbjct: 85  MKNLSLKELKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVG 144

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQ+Y HKILTGRR +M T+R+  GL+GF +R ES YD FG GHSST+ISA LGMA+ RDL
Sbjct: 145 HQSYPHKILTGRREKMSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDL 204

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
           +G  NNV++VIGDGAMTAGQAYEAMNNAGYL++++I+ILNDN QVSLPTATLDGP PPVG
Sbjct: 205 KGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVG 264

Query: 181 ALSAALAELRQRSSVR--------------------ATKVKK--------NRGCLFGDLG 240
           ALS+AL+ L+    +R                    A KV +        +   LF +LG
Sbjct: 265 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 324

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHN+ +L++  K+V+    +    GPVLIHV T+KG+GYP AE A DK HGV
Sbjct: 325 LYYIGPVDGHNIDDLISILKEVR----STKTTGPVLIHVVTEKGRGYPYAERAADKYHGV 384

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
            +F+  TGKQ K   S    SY+ YFAE+LI EAE D  IV IHAAMG GT +N F +RF
Sbjct: 385 AKFDPATGKQFK--GSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRF 444

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQ-VHDVDLQKLPVRFVVD 420
           P RCFDVGIAEQHAV+FAAGLA +G+KPFC++YS+F+QRA+DQ VHDVDLQKLPVRF +D
Sbjct: 445 PTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMD 504

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFD+ + +CL NM+VMAPSDEAEL H+VATA AIDDRPSCFR+P+G
Sbjct: 505 RAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRG 564

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG  LP   KG PLE+GKGR+L+EG  VALLGYG+ VQ CL AA +L+++G+  TVAD
Sbjct: 565 NGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVAD 624

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD  LI+ LAK H++L+TVE+GSIGGFGSHV QF +L G+LDG LK+R +VLPD
Sbjct: 625 ARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPD 684

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QL EAGL+  HI + V ++LG  +E L
Sbjct: 685 RYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREAL 715

[Close]

BLAST of Cla000872 vs. Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 7.4e-189
Identity = 343/630 (54.44%), Postives = 449/630 (71.27%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           +++ S++++E+L  EVR+E++ SVS +GGHLG+ LG  ELTVALH++F+ P+D+++WDVG
Sbjct: 24  IRDFSIEELEQLTYEVRQEMIQSVSFTGGHLGAGLGVAELTVALHHIFDTPRDRLIWDVG 83

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRR RM+T+R+ GGLSGF RR ES YD FGAGHSSTSISAALGMA+ARDL
Sbjct: 84  HQAYPHKILTGRRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHSSTSISAALGMAVARDL 143

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
           +G  NNV++VIGDGAM+AGQAYEAMNNAG   + LI+ILNDN  +S+        APPVG
Sbjct: 144 KGATNNVIAVIGDGAMSAGQAYEAMNNAGAAGSRLIVILNDN-DMSI--------APPVG 203

Query: 181 ALSAALAELRQ---------------------------RSSVRATKVKKNRGCLFGDLGL 240
           ALSA L+ L                             R+   A  +    G LF +LG 
Sbjct: 204 ALSAHLSRLLSSPSYHSLRHLVKDLAHLLPPSLERAVGRAEEYARGMVSGGGTLFEELGF 263

Query: 241 EYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGVV 300
            YVGP+DGHN   L+   K++++    +++  PV++HV T+KG+GYPPAEAA DK HGV 
Sbjct: 264 YYVGPIDGHNFEHLLPVLKNLRD----SDDTKPVMLHVVTKKGRGYPPAEAAADKYHGVG 323

Query: 301 EFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRFP 360
            F+  TG Q++K K+    SY+  FA++LI EAE DDR+V I AAM  GT L+ F  RFP
Sbjct: 324 RFDVLTG-QLEKPKANAP-SYTSVFAKALIAEAEVDDRVVAITAAMPGGTGLDKFGDRFP 383

Query: 361 DRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVDR 420
            R FDVGIAEQHAV+FA GLA +G KPFC++YS+FLQRA+DQV HDV LQKLPVRF +DR
Sbjct: 384 ARTFDVGIAEQHAVTFAGGLATEGFKPFCAIYSSFLQRAYDQVQHDVVLQKLPVRFAIDR 443

Query: 421 AGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKGN 480
           AGL G +G TH G++D+ +  CL ++++M PSDEA+L+H VATA++IDDRPS FR+P+G 
Sbjct: 444 AGLVGADGATHAGSYDMAFLGCLPDIVIMCPSDEADLMHAVATAVSIDDRPSAFRYPRGE 503

Query: 481 GIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVADA 540
           G+G  + L+ +G+ + IGKGRV+ EGN VA+L  GT + + L+AA  L  +G++ TV DA
Sbjct: 504 GVG--IELSERGSVMPIGKGRVVREGNRVAILSLGTRLAEALKAADELAARGLAPTVVDA 563

Query: 541 RFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPDK 600
           RF KPLD +LI RLA+EH++LITVEEGS+GGFGSHV    +  G LD  LK R + LPD 
Sbjct: 564 RFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDNGLKVRPLALPDV 623

Query: 601 YIEQGLPHHQLEEAGLSSMHIVSLVLSLLG 603
           ++E   P  Q E+ GL++  IV+ VL+ LG
Sbjct: 624 FVEHDAPAIQYEKIGLNASGIVATVLATLG 636

[Close]

BLAST of Cla000872 vs. TrEMBL
Match: M5W6A6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002778mg PE=3 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 8.1e-259
Identity = 456/637 (71.59%), Postives = 524/637 (82.26%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE+R +IVYSVS+SGGHL S+LG VEL VALH+VFN P DKI+WDVG
Sbjct: 1   MKNLSTEDLEQLAAELRVDIVYSVSQSGGHLSSSLGVVELAVALHHVFNTPDDKIIWDVG 60

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 61  HQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 120

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAG+L++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 121 LGKNNNIISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPAMPVG 180

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 181 ALSGALTKLQSSTQFRKLREAAKSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELG 240

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 241 LYYIGPVDGHNVSDLVTIFQRVKAM----PAPGPVLIHIMTEKGKGYPPAEAAADKMHGV 300

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ +TG+Q K +KS T LSY+QYFAESLIKEAE DD++V IHAAMG GT LN+F KRF
Sbjct: 301 VKFDPRTGQQFK-TKSST-LSYTQYFAESLIKEAEIDDKVVAIHAAMGGGTGLNYFQKRF 360

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 361 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMD 420

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL+HMVATA AIDDRPSCFRFP+G
Sbjct: 421 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRG 480

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG+LLP N KGTPLEIGKGR+LMEG+ VA+LGYG+IVQQC+EAA MLKT+ +  TVAD
Sbjct: 481 NGIGSLLPANNKGTPLEIGKGRILMEGSRVAILGYGSIVQQCVEAASMLKTRDILVTVAD 540

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD+ LIK+LAKEH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 541 ARFCKPLDTDLIKQLAKEHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 600

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QLEEAGLSS HI + VLSLLG PKE L
Sbjct: 601 RYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEAL 631

[Close]

BLAST of Cla000872 vs. TrEMBL
Match: A1XP41_HEVBR (Putative 1-deoxy-D-xylulose 5-phosphate synthase OS=Hevea brasiliensis GN=DXS2 PE=2 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 1.2e-257
Identity = 454/639 (71.05%), Postives = 523/639 (81.85%), Query Frame = 1


Query: 2   KNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVGH 61
           KNLS QD+E+LAAE+R +IVYSVSK+GGHL S+LG VEL VALH+VF+ P DKI+WDVGH
Sbjct: 79  KNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVELAVALHHVFSTPDDKIIWDVGH 138

Query: 62  QAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDLQ 121
           QAY HKILTGRRSRM TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL 
Sbjct: 139 QAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLL 198

Query: 122 GEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVGA 181
           G+ NNV+SVIGDGAMTAGQAYEAMNNAG+L+ANLI+ILNDN QVSLPTATLDGPA PVGA
Sbjct: 199 GKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGA 258

Query: 182 LSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLGL 241
           LS+ALA+++  +  R     A  + K  G                        LF +LGL
Sbjct: 259 LSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKVDEYARGMISASGSTLFEELGL 318

Query: 242 EYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGVV 301
            Y+GPVDGHN+ +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGVV
Sbjct: 319 YYIGPVDGHNIEDLVTIFQKVKAM----PAPGPVLIHIVTEKGKGYPPAEAAADKMHGVV 378

Query: 302 EFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRFP 361
           +F+ +TGKQ K  KS T LSY+QYFAE+LIKEAE D++IV IHAAMG GT LN+F KRFP
Sbjct: 379 KFDVQTGKQFKP-KSPT-LSYTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKRFP 438

Query: 362 DRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVDR 421
           DRCFDVGIAEQHAV+FAAGLA +G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +DR
Sbjct: 439 DRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 498

Query: 422 AGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKGN 481
           AGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL+HMVATA AIDDRPSCFRFP+GN
Sbjct: 499 AGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGN 558

Query: 482 GIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVADA 541
           GIGA LP N KGTPLEIGKGR+LMEGN VA+LGYG+IVQQC+EAA ML+TQG+S TVADA
Sbjct: 559 GIGAALPPNNKGTPLEIGKGRILMEGNRVAILGYGSIVQQCVEAASMLRTQGISVTVADA 618

Query: 542 RFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPDK 601
           RFCKPLD+ LI++LAKEH+ LITVEEGSIGGF SHVS F SL+G+LDGPLK RAMVLPD+
Sbjct: 619 RFCKPLDTDLIRQLAKEHEFLITVEEGSIGGFSSHVSHFLSLSGILDGPLKLRAMVLPDR 678

Query: 602 YIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGLWTK 612
           YI+ G P  Q++EAG+SS HI + VLSLLG PKE L  K
Sbjct: 679 YIDHGSPQDQIQEAGISSNHITATVLSLLGKPKEALQFK 711

[Close]

BLAST of Cla000872 vs. TrEMBL
Match: A0A0S1LLA2_9ROSA (Deoxy-D-xylulose-5-phosphatesynthase OS=Crataegus pinnatifida var. major GN=DXS1 PE=2 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 1.5e-257
Identity = 455/640 (71.09%), Postives = 527/640 (82.34%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE++ +IVYSVS+SGGHL S+LG VELTVALH+VFN P DKI+WDVG
Sbjct: 60  MKNLSTEDLEQLAAELKVDIVYSVSQSGGHLSSSLGVVELTVALHHVFNTPDDKIIWDVG 119

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 120 HQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 179

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAGYL++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 180 LGKNNNIISVIGDGAMTAGQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPAKPVG 239

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS+AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 240 ALSSALTKLQASTQFRKLREAAKSITKQIGGQTHEVAAKVDEYARGMISASGSTLFEELG 299

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 300 LYYIGPVDGHNVADLVTIFQRVKAM----PAPGPVLIHIITEKGKGYPPAEAAADKMHGV 359

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ +TGKQ K +KS T LSY+QYFAESLIKEAE DD+IV IHAAMG GT LN+F K+F
Sbjct: 360 VKFDPQTGKQFK-TKSPT-LSYTQYFAESLIKEAEIDDKIVAIHAAMGGGTGLNYFQKKF 419

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 420 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVIHDVDLQKLPVRFAMD 479

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL++MVATA AIDDRPSCFRFP+G
Sbjct: 480 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMNMVATAAAIDDRPSCFRFPRG 539

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIGALLP N KGT LE+GKGR+LMEG+ VA+LGYG+IVQQC++AA  LKT+ +S TVAD
Sbjct: 540 NGIGALLPANNKGTALEVGKGRILMEGSRVAILGYGSIVQQCVKAANNLKTRDISVTVAD 599

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD++LIK+LA+EH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 600 ARFCKPLDTELIKQLAREHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 659

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGLWTK 612
           +YI+ G P  QLEEAGLSS HI + VLSLLG PKE L  K
Sbjct: 660 RYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEALHFK 693

[Close]

BLAST of Cla000872 vs. TrEMBL
Match: A0A0S1LLA9_9ROSA (1-deoxy-D-xylulose-5-phosphatesynthase OS=Crataegus pinnatifida var. major GN=DXS2 PE=2 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 1.5e-257
Identity = 455/640 (71.09%), Postives = 527/640 (82.34%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE++ +IVYSVS+SGGHL S+LG VELTVALH+VFN P DKI+WDVG
Sbjct: 80  MKNLSTEDLEQLAAELKVDIVYSVSQSGGHLSSSLGVVELTVALHHVFNTPDDKIIWDVG 139

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 140 HQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 199

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAGYL++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 200 LGKNNNIISVIGDGAMTAGQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPAKPVG 259

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS+AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 260 ALSSALTKLQASTQFRKLREAAKSITKQIGGQTHEVAAKVDEYARGMISASGSTLFEELG 319

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 320 LYYIGPVDGHNVADLVTIFQRVKAM----PAPGPVLIHIITEKGKGYPPAEAAADKMHGV 379

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ +TGKQ K +KS T LSY+QYFAESLIKEAE DD+IV IHAAMG GT LN+F K+F
Sbjct: 380 VKFDPQTGKQFK-TKSPT-LSYTQYFAESLIKEAEIDDKIVAIHAAMGGGTGLNYFQKKF 439

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 440 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVIHDVDLQKLPVRFAMD 499

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL++MVATA AIDDRPSCFRFP+G
Sbjct: 500 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMNMVATAAAIDDRPSCFRFPRG 559

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIGALLP N KGT LE+GKGR+LMEG+ VA+LGYG+IVQQC++AA  LKT+ +S TVAD
Sbjct: 560 NGIGALLPANNKGTALEVGKGRILMEGSRVAILGYGSIVQQCVKAANNLKTRDISVTVAD 619

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD++LIK+LA+EH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 620 ARFCKPLDTELIKQLAREHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 679

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGLWTK 612
           +YI+ G P  QLEEAGLSS HI + VLSLLG PKE L  K
Sbjct: 680 RYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEALHFK 713

[Close]

BLAST of Cla000872 vs. TrEMBL
Match: A9ZN07_HEVBR (1-deoxy-D-xylulose 5-phosphate synthase OS=Hevea brasiliensis GN=HbDXS2 PE=2 SV=1)

HSP 1 Score: 892.1 bits (2304), Expect = 3.8e-256
Identity = 452/639 (70.74%), Postives = 522/639 (81.69%), Query Frame = 1


Query: 2   KNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVGH 61
           KNLS QD+E+LAAE+R +IVYSVSK+GGHL S+LG VEL VALH+VF+ P DKI+WDVGH
Sbjct: 79  KNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVELAVALHHVFSTPDDKIIWDVGH 138

Query: 62  QAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDLQ 121
           QAY HKILTGRRSRM TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL 
Sbjct: 139 QAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLL 198

Query: 122 GEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVGA 181
           G+ NNV+SVIGDGAMTAGQA+EAMNNAG+L+ANLI+ILNDN QVSLPTATLDGPA PVGA
Sbjct: 199 GKNNNVISVIGDGAMTAGQAHEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGA 258

Query: 182 LSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLGL 241
           LS+ALA+++  +  R     A  + K  G                        LF +LGL
Sbjct: 259 LSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKVDEYARGMISASGSTLFEELGL 318

Query: 242 EYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGVV 301
            Y+GPVDGHN+ +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGVV
Sbjct: 319 YYIGPVDGHNIEDLVTIFQKVKAM----PAPGPVLIHIVTEKGKGYPPAEAAADKMHGVV 378

Query: 302 EFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRFP 361
           +F+ +TGKQ K  KS T LSY+QYFAE+LIKEAE D++IV IHAAMG GT LN+F KRFP
Sbjct: 379 KFDVQTGKQFKP-KSPT-LSYTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKRFP 438

Query: 362 DRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVDR 421
           DRCFDVGIAEQHAV+FAAGLA +G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +DR
Sbjct: 439 DRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 498

Query: 422 AGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKGN 481
           AGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL+HMVATA AIDDRPSCFRFP+GN
Sbjct: 499 AGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGN 558

Query: 482 GIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVADA 541
           GIGA LP N KGTPLEIGKGR+LMEGN VA+LGYG+IVQQC+EAA ML+TQG+S TVADA
Sbjct: 559 GIGAALPPNNKGTPLEIGKGRILMEGNRVAILGYGSIVQQCVEAASMLRTQGISVTVADA 618

Query: 542 RFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPDK 601
           RFCKPLD+ LI++LAKEH+ LITVEEGSIGGF SHVS F SL+G+L GPLK RAMVLPD+
Sbjct: 619 RFCKPLDTDLIRQLAKEHEFLITVEEGSIGGFSSHVSHFLSLSGILAGPLKLRAMVLPDR 678

Query: 602 YIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGLWTK 612
           YI+ G P  Q++EAG+SS HI + VLSLLG PKE L  K
Sbjct: 679 YIDHGSPQDQIQEAGISSNHITATVLSLLGKPKEALQFK 711

[Close]

BLAST of Cla000872 vs. NCBI nr
Match: gi|659098544|ref|XP_008450191.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis melo])

HSP 1 Score: 1106.3 bits (2860), Expect = 0.0e+00
Identity = 557/612 (91.01%), Postives = 587/612 (95.92%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLSLQDVEELAAE+REE+VYSVSKSGGHLGSNLGTVELTVALHYVF+APQDKIVWDVG
Sbjct: 85  MKNLSLQDVEELAAEIREEVVYSVSKSGGHLGSNLGTVELTVALHYVFDAPQDKIVWDVG 144

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAYAHKILTGRRSRMQT+RKAGGLSGFPRRDES+YDTFGAGHSSTSISAALGMAIARDL
Sbjct: 145 HQAYAHKILTGRRSRMQTVRKAGGLSGFPRRDESIYDTFGAGHSSTSISAALGMAIARDL 204

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
           +GEENNVVSVIGDGAMTAGQAYEAMNNAGYLN+NLIIILNDNAQVSLPTATLDGPAPPVG
Sbjct: 205 KGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNSNLIIILNDNAQVSLPTATLDGPAPPVG 264

Query: 181 ALSAALAELRQRSSVRATKVKKNR---GC-LFGDLGLEYVGPVDGHNVRELVATFKDVKE 240
           ALSAALAELRQR  V AT+VKK +   GC LFGDLGL+YVGPVDGHNVRELV+TF+DVK+
Sbjct: 265 ALSAALAELRQRPFVGATEVKKTKNMVGCGLFGDLGLQYVGPVDGHNVRELVSTFEDVKQ 324

Query: 241 RC--NNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGVVEFEAKTGKQVKKSKSGTRLSY 300
           RC  NNNN+KGP+LIHVFTQKGKGYPPAEAA D+MHGVVEFEAKTGKQVK +KS  +LS+
Sbjct: 325 RCKNNNNNDKGPLLIHVFTQKGKGYPPAEAAPDRMHGVVEFEAKTGKQVKNTKSKAQLSF 384

Query: 301 SQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRFPDRCFDVGIAEQHAVSFAAGLA 360
           SQYFAESLIK AECDDRIVGIHAAMGAGTALN+F KRFPDRCFDVGIAEQHAVSFAAGLA
Sbjct: 385 SQYFAESLIKAAECDDRIVGIHAAMGAGTALNYFQKRFPDRCFDVGIAEQHAVSFAAGLA 444

Query: 361 AQGMKPFCSVYSTFLQRAFDQVHDVDLQKLPVRFVVDRAGLAGPEGPTHCGAFDILYTSC 420
            QGMKPFCSVYSTFLQRAFDQVHDVDLQKLPVRFVVDRAGLAGPEGPTHCGAFDILYTSC
Sbjct: 445 TQGMKPFCSVYSTFLQRAFDQVHDVDLQKLPVRFVVDRAGLAGPEGPTHCGAFDILYTSC 504

Query: 421 LSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKGNGIGALLPLNYKGTPLEIGKGRV 480
           LSNMIVMAPSDEAELI MVATAI IDDRPSCFRFPKGNGIGALLPLNYKGTPLEIGKGRV
Sbjct: 505 LSNMIVMAPSDEAELIRMVATAIVIDDRPSCFRFPKGNGIGALLPLNYKGTPLEIGKGRV 564

Query: 481 LMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVADARFCKPLDSKLIKRLAKEHDILI 540
           LMEGN VALLGYG+IVQQCLEAAR+LKT GVSTTVADARFCKPLDS+L+K LAK+H+ILI
Sbjct: 565 LMEGNRVALLGYGSIVQQCLEAARILKTLGVSTTVADARFCKPLDSELVKCLAKQHEILI 624

Query: 541 TVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPDKYIEQGLPHHQLEEAGLSSMHIV 600
           TVEEGSIGGFGSHVSQF SLTG+LDGPLKFRAMVLPDKYIEQGLPHHQLEEAGLS+M+IV
Sbjct: 625 TVEEGSIGGFGSHVSQFLSLTGILDGPLKFRAMVLPDKYIEQGLPHHQLEEAGLSAMNIV 684

Query: 601 SLVLSLLGTPKE 607
           S+ LSLLGT KE
Sbjct: 685 SVALSLLGTAKE 696

[Close]

BLAST of Cla000872 vs. NCBI nr
Match: gi|595840554|ref|XP_007208040.1| (hypothetical protein PRUPE_ppa002778mg [Prunus persica])

HSP 1 Score: 901.0 bits (2327), Expect = 1.2e-258
Identity = 456/637 (71.59%), Postives = 524/637 (82.26%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE+R +IVYSVS+SGGHL S+LG VEL VALH+VFN P DKI+WDVG
Sbjct: 1   MKNLSTEDLEQLAAELRVDIVYSVSQSGGHLSSSLGVVELAVALHHVFNTPDDKIIWDVG 60

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 61  HQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 120

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAG+L++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 121 LGKNNNIISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPAMPVG 180

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 181 ALSGALTKLQSSTQFRKLREAAKSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELG 240

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 241 LYYIGPVDGHNVSDLVTIFQRVKAM----PAPGPVLIHIMTEKGKGYPPAEAAADKMHGV 300

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ +TG+Q K +KS T LSY+QYFAESLIKEAE DD++V IHAAMG GT LN+F KRF
Sbjct: 301 VKFDPRTGQQFK-TKSST-LSYTQYFAESLIKEAEIDDKVVAIHAAMGGGTGLNYFQKRF 360

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 361 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMD 420

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL+HMVATA AIDDRPSCFRFP+G
Sbjct: 421 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRG 480

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG+LLP N KGTPLEIGKGR+LMEG+ VA+LGYG+IVQQC+EAA MLKT+ +  TVAD
Sbjct: 481 NGIGSLLPANNKGTPLEIGKGRILMEGSRVAILGYGSIVQQCVEAASMLKTRDILVTVAD 540

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD+ LIK+LAKEH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 541 ARFCKPLDTDLIKQLAKEHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 600

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QLEEAGLSS HI + VLSLLG PKE L
Sbjct: 601 RYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEAL 631

[Close]

BLAST of Cla000872 vs. NCBI nr
Match: gi|645219556|ref|XP_008236351.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X2 [Prunus mume])

HSP 1 Score: 900.2 bits (2325), Expect = 2.0e-258
Identity = 455/637 (71.43%), Postives = 525/637 (82.42%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE+R +IVYSVS+SGGHL S+LG VEL VALH+VFN P DKI+WDVG
Sbjct: 81  MKNLSTEDLEQLAAELRVDIVYSVSQSGGHLSSSLGVVELAVALHHVFNTPDDKIIWDVG 140

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 141 HQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 200

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAG+L++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 201 LGKNNNIISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPAMPVG 260

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 261 ALSGALTKLQSSTQFRKLREAAKSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELG 320

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 321 LYYIGPVDGHNVSDLVTIFQRVKAM----PAPGPVLIHIMTEKGKGYPPAEAAADKMHGV 380

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ +TG+Q K +KS T LSY+QYFAESLIKEAE D+++V IHAAMG GT LN+F KRF
Sbjct: 381 VKFDPRTGQQFK-TKSST-LSYTQYFAESLIKEAEIDEKVVAIHAAMGGGTGLNYFQKRF 440

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 441 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMD 500

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL+HMVATA AIDDRPSCFRFP+G
Sbjct: 501 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRG 560

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG+LLP N KGTPLEIGKGR+LMEG+ VA+LGYG+IVQQC+EAA ML+T+ +S TVAD
Sbjct: 561 NGIGSLLPANNKGTPLEIGKGRILMEGSRVAILGYGSIVQQCVEAASMLQTRDISVTVAD 620

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD+ LIK+LAKEH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 621 ARFCKPLDTDLIKQLAKEHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 680

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QLEEAGLSS HI + VLSLLG PKE L
Sbjct: 681 RYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEAL 711

[Close]

BLAST of Cla000872 vs. NCBI nr
Match: gi|645219553|ref|XP_008236345.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X1 [Prunus mume])

HSP 1 Score: 900.2 bits (2325), Expect = 2.0e-258
Identity = 455/637 (71.43%), Postives = 525/637 (82.42%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE+R +IVYSVS+SGGHL S+LG VEL VALH+VFN P DKI+WDVG
Sbjct: 82  MKNLSTEDLEQLAAELRVDIVYSVSQSGGHLSSSLGVVELAVALHHVFNTPDDKIIWDVG 141

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M TIRK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 142 HQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 201

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAG+L++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 202 LGKNNNIISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPAMPVG 261

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 262 ALSGALTKLQSSTQFRKLREAAKSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELG 321

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 322 LYYIGPVDGHNVSDLVTIFQRVKAM----PAPGPVLIHIMTEKGKGYPPAEAAADKMHGV 381

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ +TG+Q K +KS T LSY+QYFAESLIKEAE D+++V IHAAMG GT LN+F KRF
Sbjct: 382 VKFDPRTGQQFK-TKSST-LSYTQYFAESLIKEAEIDEKVVAIHAAMGGGTGLNYFQKRF 441

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 442 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMD 501

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL+HMVATA AIDDRPSCFRFP+G
Sbjct: 502 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRG 561

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIG+LLP N KGTPLEIGKGR+LMEG+ VA+LGYG+IVQQC+EAA ML+T+ +S TVAD
Sbjct: 562 NGIGSLLPANNKGTPLEIGKGRILMEGSRVAILGYGSIVQQCVEAASMLQTRDISVTVAD 621

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD+ LIK+LAKEH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 622 ARFCKPLDTDLIKQLAKEHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 681

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
           +YI+ G P  QLEEAGLSS HI + VLSLLG PKE L
Sbjct: 682 RYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEAL 712

[Close]

BLAST of Cla000872 vs. NCBI nr
Match: gi|694374851|ref|XP_009364235.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 897.9 bits (2319), Expect = 9.9e-258
Identity = 454/637 (71.27%), Postives = 525/637 (82.42%), Query Frame = 1


Query: 1   MKNLSLQDVEELAAEVREEIVYSVSKSGGHLGSNLGTVELTVALHYVFNAPQDKIVWDVG 60
           MKNLS +D+E+LAAE+R +IVYSVS+SGGHL S+LG VEL VALH+VFN P DKI+WDVG
Sbjct: 81  MKNLSTEDLEQLAAELRVDIVYSVSQSGGHLSSSLGVVELAVALHHVFNTPDDKIIWDVG 140

Query: 61  HQAYAHKILTGRRSRMQTIRKAGGLSGFPRRDESVYDTFGAGHSSTSISAALGMAIARDL 120
           HQAY HKILTGRRS+M T+RK  GL+GFP+RDESVYD FGAGHSSTSISA LGMA+ARDL
Sbjct: 141 HQAYPHKILTGRRSKMHTVRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDL 200

Query: 121 QGEENNVVSVIGDGAMTAGQAYEAMNNAGYLNANLIIILNDNAQVSLPTATLDGPAPPVG 180
            G+ NN++SVIGDGAMTAGQAYEAMNNAGYL++NLI+ILNDN QVSLPTATLDGPA PVG
Sbjct: 201 LGKNNNIISVIGDGAMTAGQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPATPVG 260

Query: 181 ALSAALAELRQRSSVR-----ATKVKKNRG-----------------------CLFGDLG 240
           ALS+AL +L+  +  R     A  + K  G                        LF +LG
Sbjct: 261 ALSSALTKLQASTQFRKLREAAKSITKKIGGQTHEVAAKVDEYARGMISASGSTLFEELG 320

Query: 241 LEYVGPVDGHNVRELVATFKDVKERCNNNNNKGPVLIHVFTQKGKGYPPAEAAHDKMHGV 300
           L Y+GPVDGHNV +LV  F+ VK         GPVLIH+ T+KGKGYPPAEAA DKMHGV
Sbjct: 321 LYYIGPVDGHNVADLVTIFQRVKAM----PAPGPVLIHIMTEKGKGYPPAEAAADKMHGV 380

Query: 301 VEFEAKTGKQVKKSKSGTRLSYSQYFAESLIKEAECDDRIVGIHAAMGAGTALNHFHKRF 360
           V+F+ KTGKQ + +KS T LSY+QYFAESLIKEAE DD+IV IHAAMG GT LN+F K+F
Sbjct: 381 VKFDPKTGKQFE-TKSPT-LSYTQYFAESLIKEAEIDDKIVAIHAAMGGGTGLNYFQKKF 440

Query: 361 PDRCFDVGIAEQHAVSFAAGLAAQGMKPFCSVYSTFLQRAFDQV-HDVDLQKLPVRFVVD 420
           PDRCFDVGIAEQHAV+FAAGLAA+G+KPFC++YS+FLQR +DQV HDVDLQKLPVRF +D
Sbjct: 441 PDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVIHDVDLQKLPVRFAMD 500

Query: 421 RAGLAGPEGPTHCGAFDILYTSCLSNMIVMAPSDEAELIHMVATAIAIDDRPSCFRFPKG 480
           RAGL G +GPTHCGAFDI Y +CL NM+VMAPSDEAEL++MVATA AIDDRPSCFRFP+G
Sbjct: 501 RAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMNMVATAAAIDDRPSCFRFPRG 560

Query: 481 NGIGALLPLNYKGTPLEIGKGRVLMEGNSVALLGYGTIVQQCLEAARMLKTQGVSTTVAD 540
           NGIGALLP+N KGTPLE+GKGR+LMEG+ VA+LGYG+IVQQC+EAA  LKT+ +  TVAD
Sbjct: 561 NGIGALLPVNNKGTPLEVGKGRILMEGSRVAILGYGSIVQQCVEAANKLKTRDIHVTVAD 620

Query: 541 ARFCKPLDSKLIKRLAKEHDILITVEEGSIGGFGSHVSQFFSLTGVLDGPLKFRAMVLPD 600
           ARFCKPLD++LIK+LA+EH+ILITVEEGSIGGFGSHVS F SL+G+LDGPLK RAMVLPD
Sbjct: 621 ARFCKPLDTELIKQLAREHEILITVEEGSIGGFGSHVSHFLSLSGILDGPLKLRAMVLPD 680

Query: 601 KYIEQGLPHHQLEEAGLSSMHIVSLVLSLLGTPKEGL 609
            YI+ G P  QLEEAGLSS HI + VLSLLG PKE L
Sbjct: 681 TYIDHGAPQDQLEEAGLSSRHISATVLSLLGRPKEAL 711

The following BLAST results are available for this feature:

BLAST of Cla000872 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DXS2_ORYSJ	5.8e-250	67.19	Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativ...	[more]
DXS1_ORYSJ	1.5e-237	64.21	1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. ...	[more]
DXS_ARATH	9.9e-234	63.01	1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana G...	[more]
DXS_CAPAN	2.1e-231	62.48	Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annu...	[more]
DXS_MAGSA	7.4e-189	54.44	1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain A...	[more]

BLAST of Cla000872 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W6A6_PRUPE	8.1e-259	71.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002778mg PE=3 SV=1	[more]
A1XP41_HEVBR	1.2e-257	71.05	Putative 1-deoxy-D-xylulose 5-phosphate synthase OS=Hevea brasiliensis GN=DXS2 P...	[more]
A0A0S1LLA2_9ROSA	1.5e-257	71.09	Deoxy-D-xylulose-5-phosphatesynthase OS=Crataegus pinnatifida var. major GN=DXS1...	[more]
A0A0S1LLA9_9ROSA	1.5e-257	71.09	1-deoxy-D-xylulose-5-phosphatesynthase OS=Crataegus pinnatifida var. major GN=DX...	[more]
A9ZN07_HEVBR	3.8e-256	70.74	1-deoxy-D-xylulose 5-phosphate synthase OS=Hevea brasiliensis GN=HbDXS2 PE=2 SV=...	[more]

BLAST of Cla000872 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098544\|ref\|XP_008450191.1\|	0.0e+00	91.01	PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cu...	[more]
gi\|595840554\|ref\|XP_007208040.1\|	1.2e-258	71.59	hypothetical protein PRUPE_ppa002778mg [Prunus persica]	[more]
gi\|645219556\|ref\|XP_008236351.1\|	2.0e-258	71.43	PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic iso...	[more]
gi\|645219553\|ref\|XP_008236345.1\|	2.0e-258	71.43	PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic iso...	[more]
gi\|694374851\|ref\|XP_009364235.1\|	9.9e-258	71.27	PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Py...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005475	Transketolase-like_Pyr-bd
IPR005477	Dxylulose-5-P_synthase
IPR009014	Transketo_C/PFOR_II

Vocabulary: **Molecular Function**
Term	Definition
GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016114	terpenoid biosynthetic process
GO:0008152	metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla000872	Cla000872.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005475	Transketolase-like, pyrimidine-binding domain	PFAM	PF02779	Transket_pyr	coord: 292..452 score: 9.6
IPR005475	Transketolase-like, pyrimidine-binding domain	SMART	SM00861	Transket_pyr_3	coord: 292..456 score: 1.0
IPR005477	Deoxyxylulose-5-phosphate synthase	HAMAP	MF_00315	DXP_synth	coord: 1..602 score: 37
IPR005477	Deoxyxylulose-5-phosphate synthase	PFAM	PF13292	DXP_synthase_N	coord: 1..201 score: 1.1E-87coord: 202..253 score: 2.
IPR009014	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	GENE3D	G3DSA:3.40.50.920		coord: 471..601 score: 1.3
IPR009014	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	unknown	SSF52922	TK C-terminal domain-like	coord: 465..601 score: 7.46
None	No IPR available	PANTHER	PTHR11624:SF83	SUBFAMILY NOT NAMED	coord: 5..611 score:

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla000872	Wax gourd	wgowmB017
Cla000872	Cucumber (Gy14) v1	cgywmB473
Cla000872	Wild cucumber (PI 183967)	cpiwmB206
Cla000872	Melon (DHL92) v3.5.1	mewmB451
Cla000872	Cucumber (Chinese Long) v2	cuwmB206
Cla000872	Bottle gourd (USVL1VR-Ls)	lsiwmB352