Cla000730 (gene) Watermelon (97103) v1

NameCla000730
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr0 : 14087322 .. 14087834 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTATACATCACAAGAGGGGTGATGTGTACTGTCCTCACATCTCCTCTTGGGTTGTGTGGGGTAATCTGGGAGGGGGTGTGACAATGAAGGGCCTATCAAAGAGTATGTGGGTGGCCAACGAAGTTAAAAGAAAGAGAAAAGATGAAGAGGAAGTGACACCGCTGATAAGAAAGAAGAAGAAGGTGTCGCAAGGGCCAAAAAAATCTGTCAAGCCAGCAAATGAGACGGCCAAGGATAAAGAGCCAGAGAACACAGAGCGAGCGAACAGTCCTGAGTTCGCTATTACCACAACATTCTTTGACCGGCTTGCTGAGAAAATGGCGAACAAAAGGGCAAAGCTAAGGAAAGAGCTGAGGGCTCTTCGTAAAGGAATGAAGCATATCGCCAAAGTAGCAGCCTCAAGTAAAAGGCTTTACGAAGAAGCGCGAGCTAGAGAAGCAGCCTCGATGCAAATGCCTCCTGATCCTCAAATTTACCAAGTTGCACTTGCATTTGAAGAGCAATGA

mRNA sequence

ATGGATGGTATACATCACAAGAGGGGTGATGTGTACTGTCCTCACATCTCCTCTTGGGTTGTGTGGGGTAATCTGGGAGGGGGTGTGACAATGAAGGGCCTATCAAAGAGTATGTGGGTGGCCAACGAAGTTAAAAGAAAGAGAAAAGATGAAGAGGAAGTGACACCGCTGATAAGAAAGAAGAAGAAGGTGTCGCAAGGGCCAAAAAAATCTGTCAAGCCAGCAAATGAGACGGCCAAGGATAAAGAGCCAGAGAACACAGAGCGAGCGAACAGTCCTGAGTTCGCTATTACCACAACATTCTTTGACCGGCTTGCTGAGAAAATGGCGAACAAAAGGGCAAAGCTAAGGAAAGAGCTGAGGGCTCTTCGTAAAGGAATGAAGCATATCGCCAAAGTAGCAGCCTCAAGTAAAAGGCTTTACGAAGAAGCGCGAGCTAGAGAAGCAGCCTCGATGCAAATGCCTCCTGATCCTCAAATTTACCAAGTTGCACTTGCATTTGAAGAGCAATGA

Coding sequence (CDS)

ATGGATGGTATACATCACAAGAGGGGTGATGTGTACTGTCCTCACATCTCCTCTTGGGTTGTGTGGGGTAATCTGGGAGGGGGTGTGACAATGAAGGGCCTATCAAAGAGTATGTGGGTGGCCAACGAAGTTAAAAGAAAGAGAAAAGATGAAGAGGAAGTGACACCGCTGATAAGAAAGAAGAAGAAGGTGTCGCAAGGGCCAAAAAAATCTGTCAAGCCAGCAAATGAGACGGCCAAGGATAAAGAGCCAGAGAACACAGAGCGAGCGAACAGTCCTGAGTTCGCTATTACCACAACATTCTTTGACCGGCTTGCTGAGAAAATGGCGAACAAAAGGGCAAAGCTAAGGAAAGAGCTGAGGGCTCTTCGTAAAGGAATGAAGCATATCGCCAAAGTAGCAGCCTCAAGTAAAAGGCTTTACGAAGAAGCGCGAGCTAGAGAAGCAGCCTCGATGCAAATGCCTCCTGATCCTCAAATTTACCAAGTTGCACTTGCATTTGAAGAGCAATGA

Protein sequence

MDGIHHKRGDVYCPHISSWVVWGNLGGGVTMKGLSKSMWVANEVKRKRKDEEEVTPLIRKKKKVSQGPKKSVKPANETAKDKEPENTERANSPEFAITTTFFDRLAEKMANKRAKLRKELRALRKGMKHIAKVAASSKRLYEEARAREAASMQMPPDPQIYQVALAFEEQ
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla000730Cla000730.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 106..126
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla000730Cla000260Watermelon (97103) v1wmwmB001
The following block(s) are covering this gene:
GeneOrganismBlock
Cla000730Watermelon (97103) v1wmwmB000
Cla000730Watermelon (97103) v1wmwmB002
Cla000730Watermelon (97103) v1wmwmB005