Cla000688 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla000688
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Calmodulin-binding transcription activator 2 (AHRD V1 ***- Q0WNN4_ARATH); contains Interpro domain(s) IPR005559 CG-1
Location	Chr6 : 2236094 .. 2238661 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAACGCCGGTAAGTAATGGAGTCAGAAGTTTTCATTTTTTTTTTTTTTTTTTTTGTTTTTGTGGAGTTCATATTTTTCCTGATGTCACATGAATTTCTGCTTAGTTTATCGAGTAAGTTTTGCGGAATATGGTTTTAACTAGAATTAAAAGTGTTGGTCGCCGAATGTAAAAAGTGTACGATGGAAGTTATTTGTGATGATTGGTTCGTGTTTGATGAAGAGCTAGGTCATATTTCAGTTCTAGTGACATAAGCTGAGCTGTTTACAGTTGATACAGTGAAGAGGTGGCTGTGAGTTGTTGAAGTCACGTGTTTATCAAAAACTGACCCTCAAGCTACTGGAAATTGGCCTGTATTTGAATTAAAATGAAGGATTTTAAGAAACTGGAAAGAAACGGTGATGGTCTTCAAGTTAATTTAAGACAATATATTTTCAGTAGCTTCGTTAAGTCTTACATTTTTTATATATTTATTTTTCTTGCGGAGAATAATGAAGTATTTGGAAACTTTGATCCGTTGAACTCTAGTTTCTTGCGTGCATTTCAATCATAGTTAATGTTTTTCATTCTCAAAATAGTTGACCATGTGTCTGATAGTAATTCATAAGTATGAAGGAAAAACGTTATCTGCACAACCGTGCTAAGGTTTTGCTTCAGGGCATCATTGTTTTGTATTTTGATGAATGTACTTTATTTATTCTGATAAAGATAACGTTCATTGAGAAAAAAATAAAGAATATTAGGACATACAAAATTGATGAGTCGATTAGTAGGGTGTTTAGAGGGTGGAGAGGGATCCTAGTGATGTTTTGTCTGCTATTAGATTCCACGTTTTCCTTTGATGTTTGGATTTTCTGTAAAGGGAGAGGAACTATTCTTTTGCCTAACCACATAAATTCATAAGTATTAGCCCGACTTTGTGAATGGTTTGGTTATCAAACTGCCAAGTCTTCCTAATAATGGCAAACATCCATATCTATAACGTCACAAACTATTTGGTCTTTATATTGGTTACCAATAGATAAAGGAACATAACAAATTTCATGCACAGATGCTTCCCCACCTTTTTTCATCCACCTTAGTTTATATGGGTTAGGATGTGCTTTGGTTTTAAGATTAAGAGCATGGACAAGTTTCTTAGACACTACATTCTCACAACTTCCACTATCTATTATTGTTGTTAGGCACTGACATCTCTTTCTTTTGTAGGATTTTCTTTTCTTGTGGGCTTGGCTTTTTGTATGCCCTTGTATTCTTTCATTTTTTTTCCCTCAATGAAAGTTGTTATTTCTATTAAAGAAAAAACTTAGAAAATTTGTTTCACATGCCAACCATGCCCCCTCTCTATCTTTCAGTTTGTCATCTTCGTGGGAGTAAGTTTTGTGATCAAAGTCCCTTACCCTGGGATCTCCATGATCTCTGACTTTGTATCCATACCAATTTTGTTGGGAAGTGAACTGAAATTTGAAAGCCTTTTTGTATCAATATCTCAGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGTTCTTTATTTTACAGAATCATGAGAATTATCAGCTGACTGAGGAGGCTCCTAAACAGCCAACTAGTAAGTAACCTTTTTAACTATTATTTTTGTTTGGAATGACTTTTGATGGCATAGTGTGCTACAGTGTTGTTTTATACCATTTGGATAATTATTGAACAATGGTTTTGCAACAGGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAAAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCACATGAACGACTTAAGGTTTTGTATCATGCAATCATTCCGTTTAAACTCATTTTTCTATTTACTTTTTATTCCTGCAGTAATATACCAAGGTGTGGTTCTTGGCTAGAATAGTTTGTTTGGTTTTCTTTTCCTCATTAGGAAGGAATATGGGATATGTTAAGAGACAACAAATGCACAACCCCGGGTGGGGTGGGGGGGATCCTGAAATGCCTACACTTGTTAATGTTGTTAGCTTTACAATTTTTGAAAACTTAGCATGCTAAAAAACAAGATCTGCATAGAAATAACTAATAAGTAGAGTAACCGAAATGATAGCCAGGACTGCACGTTTTCATGGAATGATACATACTATGGTGACACTAGTTTCGACTCCAGGACTAATGAAATGCTACAATGTTAATACCCAAGTAATCGAGTGCTAGAAAATGAACTATAAGTTGTCATAGCCTTGGATGTGGTTAATTCAATGACAATATTACCCGATTTCGGGCTATAGGAAACTCAACGGCTTACGTGCTAAAGATTTTCCTTCACCTTGAGTGCTAACTACCCAGTGATCTGTCTGCACTAGATTTTTTGAGATCGCCTAAGTTTTCTTACTGATTGCTCGAGTCTGGATTATTCTGTCTTCATGGCTAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAACCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAGTGA

mRNA sequence

ATGATGAACGCCGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGTTCTTTATTTTACAGAATCATGAGAATTATCAGCTGACTGAGGAGGCTCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAAAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCACATGAACGACTTAAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAACCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAGTGA

Coding sequence (CDS)

ATGATGAACGCCGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGTTCTTTATTTTACAGAATCATGAGAATTATCAGCTGACTGAGGAGGCTCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAAAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCACATGAACGACTTAAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAACCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAGTGA

Protein sequence

MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ

Homology

[Close]

BLAST of Cla000688 vs. Swiss-Prot
Match: CMTA4_ARATH (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-46
Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 1


Query: 6   YDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDG 65
           Y+I+ LY+EA +RWLKPPEV FILQNHE+  LT  AP++PTSGSL LFNKRVL+FFRKDG
Sbjct: 36  YEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDG 95

Query: 66  HSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           H WR+KRDGR + EAHERLKVGNAEALNCYYAHGE +P F+RR YWMLD
Sbjct: 96  HQWRRKRDGRAIAEAHERLKVGNAEALNCYYAHGEQDPTFRRRIYWMLD 144

[Close]

BLAST of Cla000688 vs. Swiss-Prot
Match: CMTA2_ARATH (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-38
Identity = 69/109 (63.30%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 7   DINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGH 66
           DI  L  EAQ RWL+P E+  IL+NH+ + +  E P +P SGSLFLF+++VLR+FRKDGH
Sbjct: 14  DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73

Query: 67  SWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           +WRKK+DG+TV EAHE+LKVG+ + L+CYYAHGE N NFQRR YWML+Q
Sbjct: 74  NWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQ 122

[Close]

BLAST of Cla000688 vs. Swiss-Prot
Match: CMTA1_ARATH (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 8.6e-38
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 7   DINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGH 66
           D+  L  EAQ RWL+P E+  ILQN+  + +  E+P +P SGSLFLF+++VLR+FRKDGH
Sbjct: 17  DMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGH 76

Query: 67  SWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           +WRKK+DG+T+ EAHE+LKVG+ + L+CYYAHGE N NFQRR YWML+Q
Sbjct: 77  NWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCYWMLEQ 125

[Close]

BLAST of Cla000688 vs. Swiss-Prot
Match: CMTA3_ARATH (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-37
Identity = 64/109 (58.72%), Postives = 88/109 (80.73%), Query Frame = 1


Query: 7   DINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGH 66
           D+  +  EA+ RWL+PPE+  ILQN++ +Q++ E P  P+SGS+F+F+++VLR+FRKDGH
Sbjct: 14  DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73

Query: 67  SWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           +WRKK+DG+TV EAHERLK G+ + L+CYYAHG+ N NFQRRSYW+L +
Sbjct: 74  NWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLLQE 122

[Close]

BLAST of Cla000688 vs. Swiss-Prot
Match: CMTA5_ARATH (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29
Identity = 55/109 (50.46%), Postives = 77/109 (70.64%), Query Frame = 1


Query: 7   DINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGH 66
           DI  +  EA +RWL+P E+  +L NH+ + +  +    P SG++ LF++++LR FRKDGH
Sbjct: 24  DIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGH 83

Query: 67  SWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           +W+KK+DG+T+ EAHE LKVGN E ++ YYAHGE  P F RR YW+LD+
Sbjct: 84  NWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTPTFVRRCYWLLDK 132

[Close]

BLAST of Cla000688 vs. TrEMBL
Match: A0A0A0KCA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095310 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-61
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           MMNAGYDINDLYREAQTRWLKPPEV FILQNHE YQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1   MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           FR+DGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD
Sbjct: 61  FRRDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 114

[Close]

BLAST of Cla000688 vs. TrEMBL
Match: A0A0D2QSA3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G332200 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.6e-52
Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           M  +GYDIN+L+REAQ+RWLKP EV FILQNHE YQL +E P++PTSGSLFLFNKRVLRF
Sbjct: 2   MAQSGYDINNLFREAQSRWLKPAEVLFILQNHEKYQLQQEPPRKPTSGSLFLFNKRVLRF 61

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           FRKDGHSWRKK+DGRTVGEAHERLKVGN E LNCYYAHGE NP+FQRRSYWMLD
Sbjct: 62  FRKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRRSYWMLD 115

[Close]

BLAST of Cla000688 vs. TrEMBL
Match: A0A0B0N9I2_GOSAR (Calmodulin-binding transcription activator 4-like protein OS=Gossypium arboreum GN=F383_05259 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-51
Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           M  +GYDIN+L+REAQ+RWLKP EV FILQNHE YQL +E P +PTSGSLFLFNKRVLRF
Sbjct: 1   MAQSGYDINNLFREAQSRWLKPAEVLFILQNHEKYQLEQEPPHKPTSGSLFLFNKRVLRF 60

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           FRKDGHSWRKK+DGRTVGEAHERLKVGN E LNCYYAHGE NP+FQRRSYWMLD
Sbjct: 61  FRKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRRSYWMLD 114

[Close]

BLAST of Cla000688 vs. TrEMBL
Match: A0A0K9QKD6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175580 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 94/114 (82.46%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 2   MNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFF 61
           M +G+D N+L R AQTRWLKP EV FILQNHENY++T+EAP++P SGSLFLFNKRVLRFF
Sbjct: 1   MQSGFDTNELLRAAQTRWLKPAEVLFILQNHENYKITQEAPQKPPSGSLFLFNKRVLRFF 60

Query: 62  RKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           RKDGHSWRKK+DGRTVGEAHERLKVGN+EALNCYYAHGE  PNFQRRSYWMLD+
Sbjct: 61  RKDGHSWRKKKDGRTVGEAHERLKVGNSEALNCYYAHGEETPNFQRRSYWMLDR 114

[Close]

BLAST of Cla000688 vs. TrEMBL
Match: A0A0K9QIH3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175580 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 94/114 (82.46%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 2   MNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFF 61
           M +G+D N+L R AQTRWLKP EV FILQNHENY++T+EAP++P SGSLFLFNKRVLRFF
Sbjct: 1   MQSGFDTNELLRAAQTRWLKPAEVLFILQNHENYKITQEAPQKPPSGSLFLFNKRVLRFF 60

Query: 62  RKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           RKDGHSWRKK+DGRTVGEAHERLKVGN+EALNCYYAHGE  PNFQRRSYWMLD+
Sbjct: 61  RKDGHSWRKKKDGRTVGEAHERLKVGNSEALNCYYAHGEETPNFQRRSYWMLDR 114

[Close]

BLAST of Cla000688 vs. NCBI nr
Match: gi|449445760|ref|XP_004140640.1| (PREDICTED: calmodulin-binding transcription activator 4 [Cucumis sativus])

HSP 1 Score: 241.5 bits (615), Expect = 7.2e-61
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           MMNAGYDINDLYREAQTRWLKPPEV FILQNHE YQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1   MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           FR+DGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD
Sbjct: 61  FRRDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 114

[Close]

BLAST of Cla000688 vs. NCBI nr
Match: gi|659119787|ref|XP_008459844.1| (PREDICTED: calmodulin-binding transcription activator 4 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 2.1e-60
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           MMNAGYDIN LYREAQTRWLKPPEV FILQNHE YQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1   MMNAGYDINYLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 116
           FR+DGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ
Sbjct: 61  FRRDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 115

[Close]

BLAST of Cla000688 vs. NCBI nr
Match: gi|823215703|ref|XP_012440589.1| (PREDICTED: calmodulin-binding transcription activator 4 isoform X1 [Gossypium raimondii])

HSP 1 Score: 211.5 bits (537), Expect = 8.0e-52
Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           M  +GYDIN+L+REAQ+RWLKP EV FILQNHE YQL +E P++PTSGSLFLFNKRVLRF
Sbjct: 2   MAQSGYDINNLFREAQSRWLKPAEVLFILQNHEKYQLQQEPPRKPTSGSLFLFNKRVLRF 61

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           FRKDGHSWRKK+DGRTVGEAHERLKVGN E LNCYYAHGE NP+FQRRSYWMLD
Sbjct: 62  FRKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRRSYWMLD 115

[Close]

BLAST of Cla000688 vs. NCBI nr
Match: gi|763793941|gb|KJB60937.1| (hypothetical protein B456_009G332200 [Gossypium raimondii])

HSP 1 Score: 211.5 bits (537), Expect = 8.0e-52
Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = 1


Query: 1   MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRF 60
           M  +GYDIN+L+REAQ+RWLKP EV FILQNHE YQL +E P++PTSGSLFLFNKRVLRF
Sbjct: 2   MAQSGYDINNLFREAQSRWLKPAEVLFILQNHEKYQLQQEPPRKPTSGSLFLFNKRVLRF 61

Query: 61  FRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           FRKDGHSWRKK+DGRTVGEAHERLKVGN E LNCYYAHGE NP+FQRRSYWMLD
Sbjct: 62  FRKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRRSYWMLD 115

[Close]

BLAST of Cla000688 vs. NCBI nr
Match: gi|823215705|ref|XP_012440590.1| (PREDICTED: calmodulin-binding transcription activator 4 isoform X2 [Gossypium raimondii])

HSP 1 Score: 210.7 bits (535), Expect = 1.4e-51
Identity = 95/113 (84.07%), Postives = 104/113 (92.04%), Query Frame = 1


Query: 2   MNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFF 61
           M +GYDIN+L+REAQ+RWLKP EV FILQNHE YQL +E P++PTSGSLFLFNKRVLRFF
Sbjct: 1   MISGYDINNLFREAQSRWLKPAEVLFILQNHEKYQLQQEPPRKPTSGSLFLFNKRVLRFF 60

Query: 62  RKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 115
           RKDGHSWRKK+DGRTVGEAHERLKVGN E LNCYYAHGE NP+FQRRSYWMLD
Sbjct: 61  RKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRRSYWMLD 113

The following BLAST results are available for this feature:

BLAST of Cla000688 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CMTA4_ARATH	1.0e-46	76.15	Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE...	[more]
CMTA2_ARATH	1.3e-38	63.30	Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE...	[more]
CMTA1_ARATH	8.6e-38	61.47	Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE...	[more]
CMTA3_ARATH	1.1e-37	58.72	Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE...	[more]
CMTA5_ARATH	3.3e-29	50.46	Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE...	[more]

BLAST of Cla000688 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA8_CUCSA	5.0e-61	97.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095310 PE=4 SV=1	[more]
A0A0D2QSA3_GOSRA	5.6e-52	83.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G332200 PE=4 SV=1	[more]
A0A0B0N9I2_GOSAR	1.2e-51	83.33	Calmodulin-binding transcription activator 4-like protein OS=Gossypium arboreum ...	[more]
A0A0K9QKD6_SPIOL	1.6e-51	82.46	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175580 PE=4 SV=1	[more]
A0A0K9QIH3_SPIOL	1.6e-51	82.46	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175580 PE=4 SV=1	[more]

BLAST of Cla000688 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445760\|ref\|XP_004140640.1\|	7.2e-61	97.37	PREDICTED: calmodulin-binding transcription activator 4 [Cucumis sativus]	[more]
gi\|659119787\|ref\|XP_008459844.1\|	2.1e-60	96.52	PREDICTED: calmodulin-binding transcription activator 4 [Cucumis melo]	[more]
gi\|823215703\|ref\|XP_012440589.1\|	8.0e-52	83.33	PREDICTED: calmodulin-binding transcription activator 4 isoform X1 [Gossypium ra...	[more]
gi\|763793941\|gb\|KJB60937.1\|	8.0e-52	83.33	hypothetical protein B456_009G332200 [Gossypium raimondii]	[more]
gi\|823215705\|ref\|XP_012440590.1\|	1.4e-51	84.07	PREDICTED: calmodulin-binding transcription activator 4 isoform X2 [Gossypium ra...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005559	CG-1_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla000688	Cla000688.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005559	CG-1 DNA-binding domain	PFAM	PF03859	CG-1	coord: 14..115 score: 7.8
IPR005559	CG-1 DNA-binding domain	SMART	SM01076	CG_1_2	coord: 11..115 score: 6.0
IPR005559	CG-1 DNA-binding domain	PROFILE	PS51437	CG_1	coord: 8..115 score: 6
None	No IPR available	PANTHER	PTHR23335	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	coord: 6..115 score: 4.8
None	No IPR available	PANTHER	PTHR23335:SF1	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4	coord: 6..115 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla000688	Melon (DHL92) v3.6.1	medwmB136
Cla000688	Melon (DHL92) v3.6.1	medwmB536
Cla000688	Silver-seed gourd	carwmB0083
Cla000688	Cucumber (Chinese Long) v3	cucwmB375
Cla000688	Cucumber (Chinese Long) v3	cucwmB574
Cla000688	Watermelon (97103) v2	wmwmbB407
Cla000688	Watermelon (97103) v2	wmwmbB411
Cla000688	Watermelon (97103) v2	wmwmbB414
Cla000688	Wax gourd	wgowmB109
Cla000688	Wax gourd	wgowmB528
Cla000688	Cucumber (Gy14) v1	cgywmB628
Cla000688	Watermelon (97103) v1	wmwmB098
Cla000688	Watermelon (97103) v1	wmwmB167
Cla000688	Cucumber (Gy14) v1	cgywmB122
Cla000688	Cucurbita maxima (Rimu)	cmawmB884
Cla000688	Cucurbita moschata (Rifu)	cmowmB873
Cla000688	Melon (DHL92) v3.5.1	mewmB139
Cla000688	Watermelon (Charleston Gray)	wcgwmB348
Cla000688	Cucumber (Chinese Long) v2	cuwmB549
Cla000688	Cucurbita pepo (Zucchini)	cpewmB471
Cla000688	Cucurbita pepo (Zucchini)	cpewmB624
Cla000688	Bottle gourd (USVL1VR-Ls)	lsiwmB038
Cla000688	Bottle gourd (USVL1VR-Ls)	lsiwmB041
Cla000688	Cucumber (Gy14) v2	cgybwmB333
Cla000688	Cucumber (Gy14) v2	cgybwmB513