ClCG11G018840 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G018840
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr11 : 32000678 .. 32002800 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTAGCAAAATCATTTCAGTAGGCGGAGATGCATTTGATTTCAGTTTAATCAATCTGAGGTCCTGTTTTTAGAATCTGATGAACTTTCGATGAAGGAAATACAAGACCTATCACTGGATTCCGAAATCGAATCGGAGGAAGAAGATGGAGTTGAAGAAACGCAGCCAGAACAGCAGAATCTCAATCGTCAAGATCAAGAACTCTTTTTGCTGCAATTCCTGGACTCCACGGATGATTATCTCAACCTCATGGATGCATTGTCCGCAACACTCCGCCAGGTACGCGAAAATTGATCCCCACATTATCCAAACCCTAATTATAACACGAACTTGTATTTCTCGCTGCTCTATTATTTCGTTGTATTGATCTCTGCATCAAGTGATGGTTTTCTGCATTCCGGATTCATAAAAAACAAATTGACTCAATTATGCTTCTGACATGGTGGAAATTGAGAAGGTCTTAAAGCGACTGGCTATTTGCTATTTGCTTAATCGGATTCACTTCTAAGACTTACTTGTTGAAATTCTGAACTCGAATTTTTAGAAGGCCTACTTATAGCAAGGGATTGTTTTTATTTGTGATCTCTTACTTTCTGCTGGCTGCGGAAATGTAACCTCGAACTTCGATCATTCATTCGAGTAACAGGGATGGTTTGACTTGGCGAGCGCCAGACATTCTATGGGTACCTCTCGCATAAGCACTGCATTACTGGACTTGAAAATCCATTCTGCTGCTACATCGCTGCGGGTGGACGAACGCGTTGGTAATCTTAATCATCTCTCCTTCCCAGATATCATTATTGAAGTTTGAACCAGTTAGGAAATTCTGTAAGCGTTGGAACGCACAATCCTTAGTTGCTACACCATCTTTCGGCTACTGTTAAGCCATTAAATTCCCTGACAAATGGAACATTTAAGCCTAAACTAAAGAGAGTATGATTATCATGTAACTACTTGATCTAGTTAACTGTTCCTCATACTGAATTAATATTGTTTAAACATGCTATGTTGACAGTCACACTTGTTACTGATATTTCCATCCACAGGTGGCTCTATAGGGACACAACCATTCGTTAACTTGCGGAAATGGACATCATCTGAATGTGGAGACTGTTTGGGGGAAGAAAAATACAACGACAAATTGCAGAGGGATTCCGATAGTCCGCAGCTACGGCAACGGAACATTTCTGAGCTTTCTGGTTGTTGACACCTTCTATTATTAGTAGATAAGCAAGATCACCATATATTTGCAATTAATGTTTCTGCATGCTTTAATGATTCGTGCGTAGAGATTTTTTTAGTTACACAAGTTGTATGTTTGGTTGCTGTCCATTGGAGTGTATGTAACCTTTCTTCATGTATTCATTTGAAGATAATCCGGGGAAAAGTTCTTTAAAGAAAGAAGATGCTCTCATCATTGATGATCAGGCAAGTGTTCACAACTGTTCCTATCATTGGCCTTGTACTTTCCTTTTATATATTATATGTGGCTTTTCCTTTCCAATTTCCTCGTGGTACTTCGACGATAAAGACATGGACAATGGGTCATACTATGTTGATCACACTATTGTAGGTACAAAAGGAGCGATCACGAACACTTTCAACATTTGGAACTCTAGTTTCCCCCAAACTCCGATCAGCTCAACTTTCATTTGAAAATGGTAAATTGCTCAATATCTGCCCTTTTCATTAAATGGGGCAGGGGTATGTGTGTGTGTGTGTGTGTTTTATAGTCAGAGAGAGAGAAAGAGTTTACATAGTTCAAGTAAACGATAATGATATACATACGCAATTTATTTGTCTGCAGCCCTTGAAATCATAGTGGGAATTGCAAATAAGCGTATTGCAATGTTATCTTCCTTTGATCAAGTCAAGAAAGAAGTGGAAGACACATCTTCCTTCAAGCAAGTCAAGGAAGAACGGGAAGACACCAAAGCATGACAATCATTTGTTTCCCTCCTGGTAAATTTTTTCTAATTTCATCAAAGTTTGCTGTGACAGCAGGTGGGATGCCATGTCCATTGTTCAAATTAATGGATTCTCCCTCGCAAGCGCACAGCGCATAACATATAAACTCTGTATTCTTCAAAGTTACAAGCAGAAATGGATTATACGACTGAA

mRNA sequence

AAATTTAGCAAAATCATTTCAGTAGGCGGAGATGCATTTGATTTCAGTTTAATCAATCTGAGGTCCTGTTTTTAGAATCTGATGAACTTTCGATGAAGGAAATACAAGACCTATCACTGGATTCCGAAATCGAATCGGAGGAAGAAGATGGAGTTGAAGAAACGCAGCCAGAACAGCAGAATCTCAATCGTCAAGATCAAGAACTCTTTTTGCTGCAATTCCTGGACTCCACGGATGATTATCTCAACCTCATGGATGCATTGTCCGCAACACTCCGCCAGGGATGGTTTGACTTGGCGAGCGCCAGACATTCTATGGGTACCTCTCGCATAAGCACTGCATTACTGGACTTGAAAATCCATTCTGCTGCTACATCGCTGCGGGTGGACGAACGCGTTGGTGGCTCTATAGGGACACAACCATTCGTTAACTTGCGGAAATGGACATCATCTGAATGTGGAGACTGTTTGGGGGAAGAAAAATACAACGACAAATTGCAGAGGGATTCCGATAGTCCGCAGCTACGGCAACGGAACATTTCTGAGCTTTCTGATAATCCGGGGAAAAGTTCTTTAAAGAAAGAAGATGCTCTCATCATTGATGATCAGGCAAGTGTTCACAACTGTTCCTATCATTGGCCTTGTACTTTCCTTTTATATATTATATGTGGCTTTTCCTTTCCAATTTCCTCGTGGTACTTCGACGATAAAGACATGGACAATGGGTCATACTATGTTGATCACACTATTGTACAAAAGGAGCGATCACGAACACTTTCAACATTTGGAACTCTAGTTTCCCCCAAACTCCGATCAGCTCAACTTTCATTTGAAAATGCCCTTGAAATCATAGTGGGAATTGCAAATAAGCGTATTGCAATGTTATCTTCCTTTGATCAAGTCAAGAAAGAAGTGGAAGACACATCTTCCTTCAAGCAAGTCAAGGAAGAACGGGAAGACACCAAAGCATGACAATCATTTGTTTCCCTCCTGGTAAATTTTTTCTAATTTCATCAAAGTTTGCTGTGACAGCAGGTGGGATGCCATGTCCATTGTTCAAATTAATGGATTCTCCCTCGCAAGCGCACAGCGCATAACATATAAACTCTGTATTCTTCAAAGTTACAAGCAGAAATGGATTATACGACTGAA

Coding sequence (CDS)

ATGAAGGAAATACAAGACCTATCACTGGATTCCGAAATCGAATCGGAGGAAGAAGATGGAGTTGAAGAAACGCAGCCAGAACAGCAGAATCTCAATCGTCAAGATCAAGAACTCTTTTTGCTGCAATTCCTGGACTCCACGGATGATTATCTCAACCTCATGGATGCATTGTCCGCAACACTCCGCCAGGGATGGTTTGACTTGGCGAGCGCCAGACATTCTATGGGTACCTCTCGCATAAGCACTGCATTACTGGACTTGAAAATCCATTCTGCTGCTACATCGCTGCGGGTGGACGAACGCGTTGGTGGCTCTATAGGGACACAACCATTCGTTAACTTGCGGAAATGGACATCATCTGAATGTGGAGACTGTTTGGGGGAAGAAAAATACAACGACAAATTGCAGAGGGATTCCGATAGTCCGCAGCTACGGCAACGGAACATTTCTGAGCTTTCTGATAATCCGGGGAAAAGTTCTTTAAAGAAAGAAGATGCTCTCATCATTGATGATCAGGCAAGTGTTCACAACTGTTCCTATCATTGGCCTTGTACTTTCCTTTTATATATTATATGTGGCTTTTCCTTTCCAATTTCCTCGTGGTACTTCGACGATAAAGACATGGACAATGGGTCATACTATGTTGATCACACTATTGTACAAAAGGAGCGATCACGAACACTTTCAACATTTGGAACTCTAGTTTCCCCCAAACTCCGATCAGCTCAACTTTCATTTGAAAATGCCCTTGAAATCATAGTGGGAATTGCAAATAAGCGTATTGCAATGTTATCTTCCTTTGATCAAGTCAAGAAAGAAGTGGAAGACACATCTTCCTTCAAGCAAGTCAAGGAAGAACGGGAAGACACCAAAGCATGA

Protein sequence

MKEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSATLRQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSSECGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQASVHNCSYHWPCTFLLYIICGFSFPISSWYFDDKDMDNGSYYVDHTIVQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKKEVEDTSSFKQVKEEREDTKA

Homology

[Close]

BLAST of ClCG11G018840 vs. TrEMBL
Match: A0A0A0L4M6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664250 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-73
Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1


Query: 1   MKEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSAT 60
           MKE+Q+ S DSEIESEEEDG EETQ EQQN   QDQEL LLQFLDSTDDYLNL+DALSAT
Sbjct: 1   MKEVQNRSQDSEIESEEEDGDEETQQEQQNPQCQDQELCLLQFLDSTDDYLNLLDALSAT 60

Query: 61  LRQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSS 120
           LRQGWF+LASARHSMGTSRISTALLD+K HSAATSLRVDER  GS+G QPF+NLRKWTSS
Sbjct: 61  LRQGWFELASARHSMGTSRISTALLDMKNHSAATSLRVDERDDGSVGMQPFINLRKWTSS 120

Query: 121 ECGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQ 173
           E GD LGEEKYNDKLQR+S SPQLRQRN+S+LSDN GKSSLKKEDALI+DDQ
Sbjct: 121 EGGDSLGEEKYNDKLQRESGSPQLRQRNVSDLSDNLGKSSLKKEDALIVDDQ 172

[Close]

BLAST of ClCG11G018840 vs. TrEMBL
Match: A0A0A0L4M6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664250 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 220 VQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKKEVEDTSS 279
           VQKERSRTLSTFGTLVSPKLR AQLSFENALE+IV IANKRIAMLSSFD+VKK  EDTSS
Sbjct: 173 VQKERSRTLSTFGTLVSPKLRLAQLSFENALELIVEIANKRIAMLSSFDEVKKGSEDTSS 232

Query: 280 FKQVKEEREDTK 292
           FKQVKEE EDTK
Sbjct: 233 FKQVKEELEDTK 244

HSP 2 Score: 166.8 bits (421), Expect = 4.0e-38
Identity = 101/251 (40.24%), Postives = 146/251 (58.17%), Query Frame = 1


Query: 27  EQQNLNRQDQELFLLQFLDSTDDYLNLMDALSATLRQGWFDLASARHSMGTSRISTALLD 86
           E++ +  +D++   LQF+DS  +YL+L D+LS+TLRQGW +LASAR+SMGTSR++++LLD
Sbjct: 13  EEEEVVIKDEDKVALQFMDSLHNYLSLSDSLSSTLRQGWLELASARYSMGTSRVNSSLLD 72

Query: 87  LKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSSECGDCLGEEKYNDKLQRDSDSPQLRQ 146
           LK HSAAT L++ E      GTQP   L+KW SSE                + +S +L  
Sbjct: 73  LKFHSAATILKITE---NEDGTQPHFTLQKWVSSE---------------HELESTKLEY 132

Query: 147 RNISELSDNPGKSSLKKEDALIIDDQASVHNCSYHWPCTFLLYIICGFSFPISSWYFDDK 206
           +N     + P  S+  K    +   Q  +  C       FL++++C  +           
Sbjct: 133 KN-----EQPQDSNSIKSSGTVFFSQYQILLC-----LLFLIFLLCFATI---------- 192

Query: 207 DMDNGSYYVDHTIVQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSS 266
             +N     D+  VQKER ++LS FG L+SPKLR+ QLSFE ALE ++ IAN R ++L S
Sbjct: 193 -TENLMGLADNDEVQKERHKSLSVFGVLISPKLRATQLSFEKALETLIEIANLRSSLLHS 224

Query: 267 FDQVKKEVEDT 278
           F Q+ +EVEDT
Sbjct: 253 FSQLNQEVEDT 224

[Close]

BLAST of ClCG11G018840 vs. TrEMBL
Match: R0I1T8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010125mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.8e-34
Identity = 102/268 (38.06%), Postives = 146/268 (54.48%), Query Frame = 1


Query: 11  SEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSATLRQGWFDLAS 70
           +EI  E E+ ++             ++  +L FLDS D YL LMD+L++ LR+GWFDLAS
Sbjct: 7   AEIYEEREESMDVVDKVAAMKTEGKEDENVLHFLDSLDGYLTLMDSLNSKLREGWFDLAS 66

Query: 71  ARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSSECGDCLGEEK 130
           ARHSMGT RI++ LLDLK H AA++L+V ++   S+G+ P   L KW +S+ G   GE+ 
Sbjct: 67  ARHSMGTLRINSTLLDLKYHPAASTLQVTDQEVESLGSVPRFALSKW-ASKGGSGKGEDF 126

Query: 131 YNDKLQRDSDSP---QLRQRNISELSDNPGKSSLKKEDALIIDDQASVHNCSYHWP--CT 190
                  +  SP   QLR R +S      GK  L               +  Y+ P  C 
Sbjct: 127 STSDTDSEIGSPLSQQLRHRGVS------GKRDL---------------SVDYYVPFICR 186

Query: 191 FLLYIICGFSFPISSWYFDDKDMDNGSYYVDHTIVQKERSRTLSTFGTLVSPKLRSAQLS 250
            L+   C           +    ++ +       ++KER+++LS FG LVSPKLR AQLS
Sbjct: 187 CLISFFCNL-------IEEKPSAEDETILAADEEIKKERAKSLSVFGGLVSPKLRGAQLS 245

Query: 251 FENALEIIVGIANKRIAMLSSFDQVKKE 274
           FE ALE IV IAN R +MLS+F+++ ++
Sbjct: 247 FETALETIVEIANMRASMLSAFERITEK 245

[Close]

BLAST of ClCG11G018840 vs. TrEMBL
Match: A0A0L9VJC7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g104300 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.6e-33
Identity = 105/275 (38.18%), Postives = 151/275 (54.91%), Query Frame = 1


Query: 2   KEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSATL 61
           +E Q      E+++++ DG ++    Q  L   +++L +LQF+DS  +YL+L D +S+TL
Sbjct: 3   EEHQYSESSEELQTQKPDGEDQQLQHQYQLPGAEEKL-VLQFMDSVHNYLSLFDKVSSTL 62

Query: 62  RQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSSE 121
           RQGWFDLASARHSMG +RI+++LLDLK HSAAT+L++        GTQP   LRKW SS 
Sbjct: 63  RQGWFDLASARHSMGAARINSSLLDLKFHSAATTLKIT----NYDGTQPCFILRKWASS- 122

Query: 122 CGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQASVHNCSYH 181
                                   ++ I EL           ED  I    +SV +C+  
Sbjct: 123 -----------------------AEKGIHEL-----------EDENIQPQDSSVKSCAV- 182

Query: 182 WPCTFLLYIICGFSFPISSWYFDDKDMDNGSYYVDHTIVQKERSRTLSTFGTLVSPKLRS 241
              +   ++IC     +           N S   D+   QKERS++LS FG L+SPK+R+
Sbjct: 183 -TVSVSHFVICLVVRTVEVIM-----AKNLSGLADNADNQKERSKSLSVFGVLISPKVRA 229

Query: 242 AQLSFENALEIIVGIANKRIAMLSSFDQVKKEVED 277
           +QL FE ALE +V IAN + ++L SF Q++K VED
Sbjct: 243 SQLLFEEALETLVEIANMQSSLLYSFHQLQK-VED 229

[Close]

BLAST of ClCG11G018840 vs. TrEMBL
Match: A0A0K9NLW1_ZOSMR (Uncharacterized protein OS=Zostera marina GN=ZOSMA_82G00510 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 98/246 (39.84%), Postives = 135/246 (54.88%), Query Frame = 1


Query: 34  QDQELFLLQFLDSTDDYLNLMDALSATLRQGWFDLASARHSMGTSRISTALLDLKIHSAA 93
           +D++  +L+FLD+ D+YL L D+LS+TLRQGW DLASARHSMG+SRISTALL+LK HSA+
Sbjct: 5   KDEDGTILKFLDTMDNYLILFDSLSSTLRQGWLDLASARHSMGSSRISTALLNLKEHSAS 64

Query: 94  TSLRV-DERVGGSIGTQPFVNLRKWTSSECGDCLGEEKYNDKLQRDSDSPQLRQRNISEL 153
           T +RV DE +  + G +P   LRKW + E                D  +P         +
Sbjct: 65  TVVRVNDETINETSGMEPHFTLRKWRTCE----------------DKTNP---------I 124

Query: 154 SDNPGKSSLKKEDALIIDDQASVHNCSYHWPCTFLLYIICGFSFPISSWYFDDKDMDNGS 213
            +      L K+ +L +  +                    GFS        + K+  N  
Sbjct: 125 EEEEDVQGLLKQPSLNLRHR--------------------GFS--------ETKEASNEP 184

Query: 214 YYVDHTIVQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKK 273
                  VQKERS+ LS FG LVSPKLRSAQ+SFE  LE ++ IAN R  MLS+F+Q+++
Sbjct: 185 LVSVDDQVQKERSKALSVFGALVSPKLRSAQISFETVLETLIDIANARSVMLSTFEQLQQ 197

Query: 274 EVEDTS 279
             E ++
Sbjct: 245 MKEQSN 197

[Close]

BLAST of ClCG11G018840 vs. TAIR10
Match: AT1G20770.1 (AT1G20770.1 unknown protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-24
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 14  ESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSATLRQGWFDLASARH 73
           E +E   V +    +  L +   +  +LQFLDS D YL LMD++++ LR+GWFDLASARH
Sbjct: 7   EGDESVDVNKESEVKTELGKGGGDENVLQFLDSLDGYLTLMDSVNSKLREGWFDLASARH 66

Query: 74  SMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSSECGDCLGEEKYND 133
           SMGT RI++ LLDLK H A+++L+V ++   S+G+ P   L KW +S+ G   G++   D
Sbjct: 67  SMGTLRINSTLLDLKYHPASSTLQVTDQDVESLGSVPHFALSKW-ASKGGSRKGKDFSTD 126

Query: 134 KLQRDSD-----SPQLRQRNISELSDNPGKSSLKKEDALIIDDQ 173
               DS+     SPQLR R +SE      K S K E  L  D++
Sbjct: 127 ---TDSEIGSPLSPQLRHRGVSE-----EKPSAKDETVLAADEE 161

HSP 2 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 1


Query: 220 VQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKKE 274
           ++KER+++LS FG LVSPKLR AQ SFE ALE +V IAN R +M+S+F+++ ++
Sbjct: 162 IKKERAKSLSVFGGLVSPKLRGAQQSFETALETLVEIANMRASMISAFERITEK 215

[Close]

BLAST of ClCG11G018840 vs. NCBI nr
Match: gi|659104804|ref|XP_008452988.1| (PREDICTED: uncharacterized protein LOC103493827 isoform X1 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 2.0e-75
Identity = 146/172 (84.88%), Postives = 160/172 (93.02%), Query Frame = 1


Query: 1   MKEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSAT 60
           MK+ QD SLDSEIESEEEDGVEE+Q EQQ+  RQDQEL LLQF+DSTDDYL+L+DALS T
Sbjct: 65  MKKTQDRSLDSEIESEEEDGVEESQQEQQSPQRQDQELCLLQFMDSTDDYLSLLDALSTT 124

Query: 61  LRQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSS 120
           LR+GWF+LASARHSMGTSRISTALLDLK+HSAATSLRVDER  GSIG QPF+NLRKWTSS
Sbjct: 125 LRKGWFELASARHSMGTSRISTALLDLKVHSAATSLRVDERDDGSIGMQPFINLRKWTSS 184

Query: 121 ECGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQ 173
           E G+CLGEEKYNDKLQR+SDSPQLRQRN+S+LSDN GKSSLKKEDALIIDDQ
Sbjct: 185 EGGECLGEEKYNDKLQRESDSPQLRQRNVSDLSDNMGKSSLKKEDALIIDDQ 236

[Close]

BLAST of ClCG11G018840 vs. NCBI nr
Match: gi|659104804|ref|XP_008452988.1| (PREDICTED: uncharacterized protein LOC103493827 isoform X1 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 1


Query: 220 VQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKKEVEDT 278
           VQKERSRTLSTFGTLVSPKLR AQLSFENALEIIVGIANKRIAMLSSFD+VKK +EDT
Sbjct: 237 VQKERSRTLSTFGTLVSPKLRLAQLSFENALEIIVGIANKRIAMLSSFDKVKKGLEDT 294

HSP 2 Score: 291.2 bits (744), Expect = 2.0e-75
Identity = 146/172 (84.88%), Postives = 160/172 (93.02%), Query Frame = 1


Query: 1   MKEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSAT 60
           MK+ QD SLDSEIESEEEDGVEE+Q EQQ+  RQDQEL LLQF+DSTDDYL+L+DALS T
Sbjct: 1   MKKTQDRSLDSEIESEEEDGVEESQQEQQSPQRQDQELCLLQFMDSTDDYLSLLDALSTT 60

Query: 61  LRQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSS 120
           LR+GWF+LASARHSMGTSRISTALLDLK+HSAATSLRVDER  GSIG QPF+NLRKWTSS
Sbjct: 61  LRKGWFELASARHSMGTSRISTALLDLKVHSAATSLRVDERDDGSIGMQPFINLRKWTSS 120

Query: 121 ECGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQ 173
           E G+CLGEEKYNDKLQR+SDSPQLRQRN+S+LSDN GKSSLKKEDALIIDDQ
Sbjct: 121 EGGECLGEEKYNDKLQRESDSPQLRQRNVSDLSDNMGKSSLKKEDALIIDDQ 172

[Close]

BLAST of ClCG11G018840 vs. NCBI nr
Match: gi|659104806|ref|XP_008452989.1| (PREDICTED: uncharacterized protein LOC103493827 isoform X2 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 1


Query: 220 VQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKKEVEDT 278
           VQKERSRTLSTFGTLVSPKLR AQLSFENALEIIVGIANKRIAMLSSFD+VKK +EDT
Sbjct: 173 VQKERSRTLSTFGTLVSPKLRLAQLSFENALEIIVGIANKRIAMLSSFDKVKKGLEDT 230

HSP 2 Score: 284.3 bits (726), Expect = 2.5e-73
Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1


Query: 1   MKEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSAT 60
           MKE+Q+ S DSEIESEEEDG EETQ EQQN   QDQEL LLQFLDSTDDYLNL+DALSAT
Sbjct: 1   MKEVQNRSQDSEIESEEEDGDEETQQEQQNPQCQDQELCLLQFLDSTDDYLNLLDALSAT 60

Query: 61  LRQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSS 120
           LRQGWF+LASARHSMGTSRISTALLD+K HSAATSLRVDER  GS+G QPF+NLRKWTSS
Sbjct: 61  LRQGWFELASARHSMGTSRISTALLDMKNHSAATSLRVDERDDGSVGMQPFINLRKWTSS 120

Query: 121 ECGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQ 173
           E GD LGEEKYNDKLQR+S SPQLRQRN+S+LSDN GKSSLKKEDALI+DDQ
Sbjct: 121 EGGDSLGEEKYNDKLQRESGSPQLRQRNVSDLSDNLGKSSLKKEDALIVDDQ 172

[Close]

BLAST of ClCG11G018840 vs. NCBI nr
Match: gi|449455627|ref|XP_004145554.1| (PREDICTED: coiled-coil domain-containing protein 115 isoform X1 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 220 VQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSSFDQVKKEVEDTSS 279
           VQKERSRTLSTFGTLVSPKLR AQLSFENALE+IV IANKRIAMLSSFD+VKK  EDTSS
Sbjct: 173 VQKERSRTLSTFGTLVSPKLRLAQLSFENALELIVEIANKRIAMLSSFDEVKKGSEDTSS 232

Query: 280 FKQVKEEREDTK 292
           FKQVKEE EDTK
Sbjct: 233 FKQVKEELEDTK 244

HSP 2 Score: 284.3 bits (726), Expect = 2.5e-73
Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1


Query: 1   MKEIQDLSLDSEIESEEEDGVEETQPEQQNLNRQDQELFLLQFLDSTDDYLNLMDALSAT 60
           MKE+Q+ S DSEIESEEEDG EETQ EQQN   QDQEL LLQFLDSTDDYLNL+DALSAT
Sbjct: 1   MKEVQNRSQDSEIESEEEDGDEETQQEQQNPQCQDQELCLLQFLDSTDDYLNLLDALSAT 60

Query: 61  LRQGWFDLASARHSMGTSRISTALLDLKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSS 120
           LRQGWF+LASARHSMGTSRISTALLD+K HSAATSLRVDER  GS+G QPF+NLRKWTSS
Sbjct: 61  LRQGWFELASARHSMGTSRISTALLDMKNHSAATSLRVDERDDGSVGMQPFINLRKWTSS 120

Query: 121 ECGDCLGEEKYNDKLQRDSDSPQLRQRNISELSDNPGKSSLKKEDALIIDDQ 173
           E GD LGEEKYNDKLQR+S SPQLRQRN+S+LSDN GKSSLKKEDALI+DDQ
Sbjct: 121 EGGDSLGEEKYNDKLQRESGSPQLRQRNVSDLSDNLGKSSLKKEDALIVDDQ 172

[Close]

BLAST of ClCG11G018840 vs. NCBI nr
Match: gi|778697212|ref|XP_011654281.1| (PREDICTED: uncharacterized protein LOC101206061 isoform X2 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 1


Query: 220 VQKERSRTLSTFGTLVSPKLRSAQLSFENAL 251
           VQKERSRTLSTFGTLVSPKLR AQLSFENA+
Sbjct: 173 VQKERSRTLSTFGTLVSPKLRLAQLSFENAI 203

HSP 2 Score: 166.8 bits (421), Expect = 5.7e-38
Identity = 101/251 (40.24%), Postives = 146/251 (58.17%), Query Frame = 1


Query: 27  EQQNLNRQDQELFLLQFLDSTDDYLNLMDALSATLRQGWFDLASARHSMGTSRISTALLD 86
           E++ +  +D++   LQF+DS  +YL+L D+LS+TLRQGW +LASAR+SMGTSR++++LLD
Sbjct: 13  EEEEVVIKDEDKVALQFMDSLHNYLSLSDSLSSTLRQGWLELASARYSMGTSRVNSSLLD 72

Query: 87  LKIHSAATSLRVDERVGGSIGTQPFVNLRKWTSSECGDCLGEEKYNDKLQRDSDSPQLRQ 146
           LK HSAAT L++ E      GTQP   L+KW SSE                + +S +L  
Sbjct: 73  LKFHSAATILKITE---NEDGTQPHFTLQKWVSSE---------------HELESTKLEY 132

Query: 147 RNISELSDNPGKSSLKKEDALIIDDQASVHNCSYHWPCTFLLYIICGFSFPISSWYFDDK 206
           +N     + P  S+  K    +   Q  +  C       FL++++C  +           
Sbjct: 133 KN-----EQPQDSNSIKSSGTVFFSQYQILLC-----LLFLIFLLCFATI---------- 192

Query: 207 DMDNGSYYVDHTIVQKERSRTLSTFGTLVSPKLRSAQLSFENALEIIVGIANKRIAMLSS 266
             +N     D+  VQKER ++LS FG L+SPKLR+ QLSFE ALE ++ IAN R ++L S
Sbjct: 193 -TENLMGLADNDEVQKERHKSLSVFGVLISPKLRATQLSFEKALETLIEIANLRSSLLHS 224

Query: 267 FDQVKKEVEDT 278
           F Q+ +EVEDT
Sbjct: 253 FSQLNQEVEDT 224

The following BLAST results are available for this feature:

BLAST of ClCG11G018840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4M6_CUCSA	1.7e-73	84.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664250 PE=4 SV=1	[more]
A0A0A0L4M6_CUCSA	1.1e-24	90.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664250 PE=4 SV=1	[more]
R0I1T8_9BRAS	7.8e-34	38.06	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010125mg PE=4 SV=1	[more]
A0A0L9VJC7_PHAAN	6.6e-33	38.18	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g104300 PE=4 SV=1	[more]
A0A0K9NLW1_ZOSMR	1.1e-32	39.84	Uncharacterized protein OS=Zostera marina GN=ZOSMA_82G00510 PE=4 SV=1	[more]

BLAST of ClCG11G018840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20770.1	2.9e-24	42.07	unknown protein	[more]

BLAST of ClCG11G018840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104804\|ref\|XP_008452988.1\|	2.0e-75	84.88	PREDICTED: uncharacterized protein LOC103493827 isoform X1 [Cucumis melo]	[more]
gi\|659104804\|ref\|XP_008452988.1\|	1.0e-18	93.10	PREDICTED: uncharacterized protein LOC103493827 isoform X1 [Cucumis melo]	[more]
gi\|659104806\|ref\|XP_008452989.1\|	1.0e-18	93.10	PREDICTED: uncharacterized protein LOC103493827 isoform X2 [Cucumis melo]	[more]
gi\|449455627\|ref\|XP_004145554.1\|	1.6e-24	90.28	PREDICTED: coiled-coil domain-containing protein 115 isoform X1 [Cucumis sativus...	[more]
gi\|778697212\|ref\|XP_011654281.1\|	2.9e-05	93.55	PREDICTED: uncharacterized protein LOC101206061 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G018840.1	ClCG11G018840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31996	FAMILY NOT NAMED	coord: 213..275 score: 3.9E-32coord: 4..173 score: 3.9
None	No IPR available	PANTHER	PTHR31996:SF2	COILED-COIL DOMAIN-CONTAINING PROTEIN 115	coord: 213..275 score: 3.9E-32coord: 4..173 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G018840	Csa4G664250	Cucumber (Chinese Long) v2	cuwcgB280
ClCG11G018840	MELO3C017040	Melon (DHL92) v3.5.1	mewcgB463
ClCG11G018840	Cla023460	Watermelon (97103) v1	wcgwmB103
ClCG11G018840	Cla97C11G224960	Watermelon (97103) v2	wcgwmbB064
ClCG11G018840	Bhi09G002374	Wax gourd	wcgwgoB182
ClCG11G018840	CSPI04G27060	Wild cucumber (PI 183967)	cpiwcgB290
ClCG11G018840	Cucsa.272250	Cucumber (Gy14) v1	cgywcgB469
ClCG11G018840	CmaCh01G020260	Cucurbita maxima (Rimu)	cmawcgB389
ClCG11G018840	CmoCh01G020800	Cucurbita moschata (Rifu)	cmowcgB388
ClCG11G018840	Lsi04G018200	Bottle gourd (USVL1VR-Ls)	lsiwcgB261
ClCG11G018840	Cp4.1LG02g08370	Cucurbita pepo (Zucchini)	cpewcgB491
ClCG11G018840	CsGy4G025380	Cucumber (Gy14) v2	cgybwcgB260
ClCG11G018840	MELO3C017040.2	Melon (DHL92) v3.6.1	medwcgB456
ClCG11G018840	Carg21363	Silver-seed gourd	carwcgB0349
ClCG11G018840	CsaV3_4G037430	Cucumber (Chinese Long) v3	cucwcgB289

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G018840	Cucurbita maxima (Rimu)	cmawcgB017
ClCG11G018840	Cucurbita moschata (Rifu)	cmowcgB010
ClCG11G018840	Cucumber (Chinese Long) v2	cuwcgB533
ClCG11G018840	Cucurbita pepo (Zucchini)	cpewcgB696
ClCG11G018840	Silver-seed gourd	carwcgB0102