ClCG11G016290 (gene) Watermelon (Charleston Gray)

Overview
NameClCG11G016290
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionProtein recA
LocationCG_Chr11 : 29583293 .. 29589685 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCGTTTCGAATTCACTGGCTTGCAAGACTCTCCCTTGCCGGACTCTGTTTCCGCCGTGCGCAACATCTTCTCGCCGCCGCCAATGGTTGCCTTCTTCACTCTTCAATGCAGGCAAGCGAGTCAGAGAGCTTCGCTGCGAGTTCGAAGTGAACGTTAATGGCGCTCTTTCCAGCGACTTCGACCCTCGTTCCGTTGACAGGGTACTCATGCGAGTCTTTCTTCTCCGTATTTTCTTTCCGCTGCTTGTCTTACCTTGTTTTCTTAATTTTAGGCCGGAAATGTCTGTAATGCTTTTTTAATTCATTTTTCGTGGGTTGTTTCATTGGGTGGATCAAGTTTTTTTCTAATAAAATGTGTATATCAAATTGGAGCCCTATGAAACTTTGTTTAGGGCTTTCCATTGTTAAATGACGAAAAACAGAAAGGTAGGCCATGCTATTACAATACAGTAGGGCGTAGAGGGAGAAAAGATTATTTGCAAATCTAATATTTGACGATGATGATTGTTTGCTGCGATTAGGTTGCTTTACTAGCAGTTATTAGTTTCTCAGATATTGCAATTTTTGTGTCATCCCAGAAAAAAGCATTGGAGGCAGCAATGAATGAAATAAATAGCTCATTTGGGAAAGGAAGTGTTACACGACTTGGAAGTGCTGGTGGAGCATTAGTGTATGCCCTTTTTGTTTCTTCGTTTTTTTTTTTCCTGAGAATGCTGTAAAATTTAAAAAATTTTCTCCTTGTCGCAGGGTTTCAATGATTCTTTTTAGTTTTATAGATTTTTTATGTTAGTTACAGGTTGGAAAATGTTCTAATCAAATTACAGGTTGTGAGCTTTTGCATTGCATAAAGCAGCACAATGCAAGTTCAATCTTGTCGGGTTTAAATGTCCGTTGTCTTTTGTTCGTACAGGGAAACTTTCCCAAGTGGCTGTTTGACTTTAGATTGTGCCTTAGGTGGTGGCCTTCCTAAAGGCAGAATTGTCGAGGTATGTTTACTTGTTCTGGGGGCTTAAGTATTAAAGTGAAGAAATTTTGTCAAGTCGTGTAGTATTTTAGTTGATAGATGGAAATTGTCAATTTGCTTGTAATGAGAGTATTCTCTAGCTCACTACACAAGTACATGCCAAAATCATGGCGAGCCTCTATCATTATTGCAGACTACCAAAATGTGCTCTCACAAGTTGGTATGACACCTTTTAAAAATAAACTTGATGGTACCCAAAGAAAATAAAGCTTGTTCAGAAAGAACGAACTTCTGAATTTAAAGTTGTCTCAAACATGTTTGTATTTTTAGAAAACTTCCGTTTGTTTATTTTTTTTTTCTTATCATCATTCTTTTTCCAGATATTTGGACCAGAAAGTAGTGGAAAGACCACCCTAGCATTGCATGCAATTGCAGAAGTACAGGTACACGCATAAATACATATATTGTTATGTTACTTCTCATCATCGTCTTATTTTTATTTAACGAGAGGCTTGGGGAGGCACTAGGAAACATAGTGGTTTTGTTTGTTATGAGAAATAATACCTATTCAGTTGTAACGTGCAGAAACTAGGAGGAAATGCGATGCTTGTAGATGCAGAGCATGCCTTTGATCCAGCATATTCTAAAGCTGTAGGAGTGGATGTAGAAAATTTAATTGTATGCCAACCTGATCATGGAGAGATGGCACTTGAGAGTAATATATGCTAAATTGACTTTGCAGTTTGCTTGAATGAAATAGTGTTATGGCTTTTGGCTATTGGGATGCTTGTGATGTTTGTGTTTTGATGGATAAACATTCTTATATCAGTTGCAGATCGCATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTTGATTCTGTCTCTGCTCTTACACCAAGAGCAGAAATCGAAGTAATTTTTCTCACCTTCTTTTGTTTTGGTAGCTTTCTCGTGAGGTTGCTAATCTTACATTGTGTATCCTTGCTTTCAGGGTGAGATCGGTATGCAGCAAATGGGTTTGCAAGCACGCCTCATGAGTCAAGCTCTTCGTAAAATGTCTGGAAATGCCTCAAAAGCTGGTTGTACTCTCATATTTTTGAATCAAATACGATATAAGGTTGTTTTCACTCTTCAGTTAGGTTTAATTATCCCATCTTTAAAGTTTGGTAGATTTTATGCATGGTAACGGTAATGGTAATGGTTAGGGGTTCAGGGTTTAGTTCTTCTTTCTCCTACAGGGATTTAATTTTTTAAATGATGGTATATATTTGTAACCTTACAACAGTGAATGAAAGTTGTGTTTGTTCTCATAATTAAATAAACAAAAATAGTCATATATTTGCACCCTGTGTGAGAATTCTACTCTAACCTTGTTTCTAGTACTGTATAATTATCCTCGTATGTAAAATATTTCAAAGCATAATGGTATTGTTGTTCTGAATTTTATTAGATTGGTGTGTATTATGGAAATCCAGAAGTGACGAGTGGAGGGATTGCACTGAAGTTCTTTGCCTCACTTCGACTTGAAATACGTCCTATTGGGAAGCTAAAGTCTGTAAGAATGCTCTCTCTTGTTTTCTTTCCCTGAACCAATTAATAGTTTTTCCCTTTTCTTTTAAAGACAGATTGAATTAAGCACGGAAGTAATTACAATTTACATTAATGTCATAACAACCGATTGAGGCGATCCTTATTCTGCGTGCTTCCTTCTTTTTAAAGGCTAAAGGAGATGAAGAAATTGGGATTCGAGTTCGTGTTAGAGTCCAAAAGAGCAAGGTAAAACAATAATGATAATGTTTTGTTTGTTTAGGGTCTTGTCAATTCGTATGTGAGCCTTTTTCTTTGCTATGATTTTTTTTTCTCCTGATTTAAGATTTTCTTGCTCAGTAGGATGATACAAAGCAACTAGGGCCTGATAGAGAGTGAAGATTAATTGTTGTTTCGTGTAGGTTATCATTTAAGATAGAAAAGTATCAAGGAAGAGGTGATGCTTTTTACGGACCTGGGAGCATTCAAATAGAAACTTGAGAGGAAAGATAATCATTTTATGGATTCTTTGGAATAGAAAAGATCGTAGAATGTAAGATAGGTCTAGAAACTTTGAGGAAATTGGGATCATCACCTTTTGGATTCTTCTTCGAGTAATGTCTCATAAGTTCCTAAGGATTGAGTGTTGGTTTCTTTTTCTTCTGTATTTTGTTTTGGGTTTAATGAAGTTTTTGCTATCTAGCAGAAATATTCAACAAAAATAAGCTTAAATTATTAATTTTCTCAAATACTTGGGCAACTTAATTTTGTTGTTATTCAACCCCACGAACTCCTGATAAAATCCCTTCTATTAGACCCTCTCTTGCGTCTTTAAGAGAAACAGAATATCAAGACAACTCATGGACCGGTTATTAGTAGGTTTCAAGAGTATGTTAGTAATTAGTTAGGGAGGTTGTTTGGAAGTTTCGTTATAAATACAATGAGTGAGAAAAGAGTTCGTAGAGATTATTTTAGTAAGTGAATTAGGGCTTGAGAGAGATCTCTAGAAGGGAGGATCCAAGTACCTTGAAACACTTGGTTTCTCTTGTAGTTTGGTTACCTTTTATCTTTCAATACATTTGGTCTGAGAATGTGTTCCAGGCAACAGAGGCGAGAGTCCCATGAAGAGATCGCTGACAATTGTGGATTCGGAGGTGGGAGATGAAAGCCTAGAAGAGGAGTTGGCAGATGGTCGTGAGAAAAATGGAAATAGAAAAAGAGAAGTACCGGATGGAGGTTAACGTCGGGTGAAGGCTTGGACAGAGATGAAGACTTGGGAAAGAAGACATCAATGCAAGTTGAATGGAGACGAACACTTGGATATGAGGCTTGTTTTTGGTTGTCACATGCATTTGGTGCAGAATGAAGGTTCTCAATGAAATGGGGTTGTAGACTTGGTGGGATGAGTTGAATAAACTTGGTGAAGGTCACATGTTATAGAAATCCGTTGAGGCTCATTTACTTTCAGAAGAACAAAAGGAGGTTATTATCCAAGTTAGCTTTTGAGCTGGTTTGATCTACATTTTATACCTACGAACACCACGTTTAGATCTACATTTTAGATCTACATTTTATATCTACATTTTATACCTTCAGCTGGTGATTGGGCATGACTCTACGAACACCACGTAGAAAGAAGCCTTGTTTGTTGTTTCCCATGGGCTTCGATGAACACCATGTCACCACCACTCACCATTGATCTTCAGCAGTCCGCACCCATCAATGTGCTGAGTATAAGGTGTGTTTTAAGGGCAGGTAATGATCGGAATGCTAGTAGGATAGAAATTAGGATATTAGTAGGTATTTGATAGACCTCGTTGTGGGCTGGTGTATATGTAGGGAAAGTTGAGTTGAGAGAGGGGAAGCTCTACCTCAGTTGATAAATAAAATATCAATATTTAGGTATTAAGGGTATATTAGTAATCAGTTAAGGAGTTTGCTAGAGAATTAGGGATTGAGAGATATCTCAAGAGGGGAGGGTCCAAGGGCCTTGAAATACTTGGTTTATTTTGTAGTTTGGTTTTCTTTTATCCTTCAGCACATTTGGGTTCAATCAATCTCCTCGCTCTACCTGGGAGACCTTTGATATTCCTGGAGATGGACCTTGGGTCACCAAAGGAGCATGTGCTTTTGCAGAAGCAACTTCCAAATAGGATACTTTTTCTCTAACTACCAAAATGATTTGCCATGAAATGGTTTGTTATGATATCTTCTTACTACTTTGATGTTATATGGGAGAAATGTTAGTGATCTGTAACTAAATGCCAGATTGAGCGGGCATTTAGTTTAGTTCTTAAAATATTTTCATGCTTATATTTGAAGGCTCTATATCGAGTTTCCTATCTTTTTCCTTAGAACATTAAACATTTTATCCTAAAATGTGTTGCTATAGGTGTCGAGGCCATACAAGCAAGCTGAATTTGAAATTATCTTTGGAGAGGGAGTAGGTAAACTGGTCAGTATTCTAGGAGTAAGCATTTTTCAATTGCGGGTGCAAAATATTGTCTATTCTCGCTTCATATTTTTTACTCTTCTCCCCACAGGGTTGCATTTTAGATTGTGCTGAAATTATGGACATTGTAGTGAAAAAGGGCTCGTGGTACAGTTACGGGGATCACAGGTTTGTCTTGTGCTCATATTAATTGCTTTTAAGAAAAACATTGGATTTTATTTAAATTTTACAAAGAGATTTCATCATTTATTGCTTATGTTTCGATTTTCCTATCTTCATAGGCATTCCATTAACTTTGAGGATTGTTTTCTGTTGACTAAAGCGAAACTTATTGTTAAGCTTTTGTTTAAGACACTATTATTTCCTTGTTTGATAAAGGTTGGGGCAAGGAAGAGACAGAGCTCTGCAATACTTAAAAGATAATCCTGCTCTTCAAGATGAAATTGAGAAGGTTTGTTTTTGCGGCAGGCATACTATCTGAATTCATAATTGATACAACAATTTTTACTTTGTCAAATGTGATTTTTTCCCCCTTTTTTTTGTTACAATGAGTGTGTGGTTTGTAAATCGTTAAAATCATGTTCAAAATTACTCTGAAACACACTTTTTAATCACTCAAAATCAATTCAGTGTTTACTTTTACACTTTTAAACATAGTTTTCATATTATTAAAATTGATTTTGAATGATTAAAAGCATTTTCAAAGTGATTTAAAAAATGACAAAAGTGATTTTAACCATTGTAAAATCACTCCTAAACACGCCTTTAGTATTCCAATAATATTCTTGTCCGAGAAATATGGTCAAACTCATAAAAATAGGAACCGATCCACTGATATTTCATGAAAGCTTTTGAATTTTCTAATGGCAGGCTGTGCAGACCATGCTGACAAGTGGAACTGTTCAAATGGGATTTCAATCTATTAGAAAGCCATTGCCGAACCAAGAAGAGGTACTTGAAGAGCTCGAATAATGAACAATGTATGCCACGATTAAGCAATAGCAACAGAGATTCCAAGCAGAAGCAACATTTCTTCTATGGAGAAGGGGATGGGATGATCAGCCTAAGCCCCCATAGATCCATTTTCCGTGCTACATCCACCATGGGAAGCTGTTAGAAGCAAACAATTCCGCCTTTTTCGTTAGTTAGGCGCGAGCTAGATGTGATGAAGACAGTAAGAACTGGCTTCTTTGCTTCCGATCTCTGAAGACAACGTTTTGGATCATCCTTGAAATCATTGAAGTCCTTCGGTCTCGCTAAGCTGGTATAATTTGAAACCAAATCTTGAGAAGTTGGTCTGAAGTTACAGGTGTAATTTTTACTGCAACTCATCAGGTATCATATTCACATTTGTACTTGGTGTATAACATTATATAATGATTGCTTGCCATCCAGCCAGCTCCCAGGTGCATTTTATTATAGGAGGATGATGGAATTCAAG

mRNA sequence

ATGGATTTCGTTTCGAATTCACTGGCTTGCAAGACTCTCCCTTGCCGGACTCTGTTTCCGCCGTGCGCAACATCTTCTCGCCGCCGCCAATGGTTGCCTTCTTCACTCTTCAATGCAGGCAAGCGAGTCAGAGAGCTTCGCTGCGAGTTCGAAGTGAACGTTAATGGCGCTCTTTCCAGCGACTTCGACCCTCGTTCCGTTGACAGGGTTGCTTTACTAGCAGTTATTAGTTTCTCAGATATTGCAATTTTTGTGTCATCCCAGAAAAAAGCATTGGAGGCAGCAATGAATGAAATAAATAGCTCATTTGGGAAAGGAAGTGTTACACGACTTGGAAGTGCTGGTGGAGCATTAGTGGAAACTTTCCCAAGTGGCTGTTTGACTTTAGATTGTGCCTTAGGTGGTGGCCTTCCTAAAGGCAGAATTGTCGAGATATTTGGACCAGAAAGTAGTGGAAAGACCACCCTAGCATTGCATGCAATTGCAGAAGTACAGAAACTAGGAGGAAATGCGATGCTTGTAGATGCAGAGCATGCCTTTGATCCAGCATATTCTAAAGCTGTAGGAGTGGATGTAGAAAATTTAATTGTATGCCAACCTGATCATGGAGAGATGGCACTTGAGATTGCAGATCGCATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTTGATTCTGTCTCTGCTCTTACACCAAGAGCAGAAATCGAAGGTGAGATCGGTATGCAGCAAATGGGTTTGCAAGCACGCCTCATGAGTCAAGCTCTTCGTAAAATGTCTGGAAATGCCTCAAAAGCTGGTTGTACTCTCATATTTTTGAATCAAATACGATATAAGATTGGTGTGTATTATGGAAATCCAGAAGTGACGAGTGGAGGGATTGCACTGAAGTTCTTTGCCTCACTTCGACTTGAAATACGTCCTATTGGGAAGCTAAAGTCTGCTAAAGGAGATGAAGAAATTGGGATTCGAGTTCGTGTTAGAGTCCAAAAGAGCAAGGTGTCGAGGCCATACAAGCAAGCTGAATTTGAAATTATCTTTGGAGAGGGAGTAGGTAAACTGGTCAGTATTCTAGGAGGTTGCATTTTAGATTGTGCTGAAATTATGGACATTGTAGTGAAAAAGGGCTCGTGGTACAGTTACGGGGATCACAGGTTTGCTGTGCAGACCATGCTGACAAGTGGAACTGTTCAAATGGGATTTCAATCTATTAGAAAGCCATTGCCGAACCAAGAAGAGGTACTTGAAGAGCTCGAATAATGAACAATGTATGCCACGATTAAGCAATAGCAACAGAGATTCCAAGCAGAAGCAACATTTCTTCTATGGAGAAGGGGATGGGATGATCAGCCTAAGCCCCCATAGATCCATTTTCCGTGCTACATCCACCATGGGAAGCTGTTAGAAGCAAACAATTCCGCCTTTTTCGTTAGTTAGGCGCGAGCTAGATGTGATGAAGACAGTAAGAACTGGCTTCTTTGCTTCCGATCTCTGAAGACAACGTTTTGGATCATCCTTGAAATCATTGAAGTCCTTCGGTCTCGCTAAGCTGGTATAATTTGAAACCAAATCTTGAGAAGTTGGTCTGAAGTTACAGGTGTAATTTTTACTGCAACTCATCAGGTATCATATTCACATTTGTACTTGGTGTATAACATTATATAATGATTGCTTGCCATCCAGCCAGCTCCCAGGTGCATTTTATTATAGGAGGATGATGGAATTCAAG

Coding sequence (CDS)

ATGGATTTCGTTTCGAATTCACTGGCTTGCAAGACTCTCCCTTGCCGGACTCTGTTTCCGCCGTGCGCAACATCTTCTCGCCGCCGCCAATGGTTGCCTTCTTCACTCTTCAATGCAGGCAAGCGAGTCAGAGAGCTTCGCTGCGAGTTCGAAGTGAACGTTAATGGCGCTCTTTCCAGCGACTTCGACCCTCGTTCCGTTGACAGGGTTGCTTTACTAGCAGTTATTAGTTTCTCAGATATTGCAATTTTTGTGTCATCCCAGAAAAAAGCATTGGAGGCAGCAATGAATGAAATAAATAGCTCATTTGGGAAAGGAAGTGTTACACGACTTGGAAGTGCTGGTGGAGCATTAGTGGAAACTTTCCCAAGTGGCTGTTTGACTTTAGATTGTGCCTTAGGTGGTGGCCTTCCTAAAGGCAGAATTGTCGAGATATTTGGACCAGAAAGTAGTGGAAAGACCACCCTAGCATTGCATGCAATTGCAGAAGTACAGAAACTAGGAGGAAATGCGATGCTTGTAGATGCAGAGCATGCCTTTGATCCAGCATATTCTAAAGCTGTAGGAGTGGATGTAGAAAATTTAATTGTATGCCAACCTGATCATGGAGAGATGGCACTTGAGATTGCAGATCGCATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTTGATTCTGTCTCTGCTCTTACACCAAGAGCAGAAATCGAAGGTGAGATCGGTATGCAGCAAATGGGTTTGCAAGCACGCCTCATGAGTCAAGCTCTTCGTAAAATGTCTGGAAATGCCTCAAAAGCTGGTTGTACTCTCATATTTTTGAATCAAATACGATATAAGATTGGTGTGTATTATGGAAATCCAGAAGTGACGAGTGGAGGGATTGCACTGAAGTTCTTTGCCTCACTTCGACTTGAAATACGTCCTATTGGGAAGCTAAAGTCTGCTAAAGGAGATGAAGAAATTGGGATTCGAGTTCGTGTTAGAGTCCAAAAGAGCAAGGTGTCGAGGCCATACAAGCAAGCTGAATTTGAAATTATCTTTGGAGAGGGAGTAGGTAAACTGGTCAGTATTCTAGGAGGTTGCATTTTAGATTGTGCTGAAATTATGGACATTGTAGTGAAAAAGGGCTCGTGGTACAGTTACGGGGATCACAGGTTTGCTGTGCAGACCATGCTGACAAGTGGAACTGTTCAAATGGGATTTCAATCTATTAGAAAGCCATTGCCGAACCAAGAAGAGGTACTTGAAGAGCTCGAATAA

Protein sequence

MDFVSNSLACKTLPCRTLFPPCATSSRRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSSDFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGDHRFAVQTMLTSGTVQMGFQSIRKPLPNQEEVLEELE
Homology
[Close]
BLAST of ClCG11G016290 vs. Swiss-Prot
Match: RECAC_ARATH (DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 2.2e-155
Identity = 289/374 (77.27%), Postives = 312/374 (83.42%), Query Frame = 1 

Query: 14  PCRTLFPPCATSS--RRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSSDFDPRSVDRVA 73
           PC +  P    SS   RR + P +++ A K   ++  EF+  +NGALS D D R +DR  
Sbjct: 26  PCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDR-- 85

Query: 74  LLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDC 133
                            +KALEAAMN+INSSFGKGSVTRLGSAGGALVETF SG LTLD 
Sbjct: 86  -----------------QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDL 145

Query: 134 ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVD 193
           ALGGGLPKGR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVD
Sbjct: 146 ALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD 205

Query: 194 VENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL 253
           VENLIVCQPD+GEMALE ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL
Sbjct: 206 VENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL 265

Query: 254 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGK 313
           MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIR  GK
Sbjct: 266 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGK 325

Query: 314 LKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDI 373
           +KS+KGDE+IG+R RVRVQKSKVSRPYKQAEFEI+FGEGV KL     GC+LDCAEIM++
Sbjct: 326 IKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKL-----GCVLDCAEIMEV 375

Query: 374 VVKKGSWYSYGDHR 386
           VVKKGSWYSY D R
Sbjct: 386 VVKKGSWYSYEDQR 375

[Close]
BLAST of ClCG11G016290 vs. Swiss-Prot
Match: RECA_THEEB (Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) GN=recA PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 8.6e-104
Identity = 192/312 (61.54%), Postives = 240/312 (76.92%), Query Frame = 1 

Query: 76  ISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGG 135
           +S + +++    ++KALE A+++I  SFGKGS+ RLG A    VET  SG LTLD ALGG
Sbjct: 1   MSDTTLSLLSPEKRKALEFAISQIERSFGKGSIMRLGDATSMKVETISSGALTLDLALGG 60

Query: 136 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENL 195
           GLPKGRI+EI+GPESSGKTTLALHAIAEVQK GG A  VDAEHA DP Y+ A+ VD++NL
Sbjct: 61  GLPKGRIIEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYAAALRVDIQNL 120

Query: 196 IVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQA 255
           +V QPD GE ALEI D++ RS AVD+I VDSV+AL PRAEIEG++G   +GLQARLMSQA
Sbjct: 121 LVAQPDTGEAALEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGDMGESHVGLQARLMSQA 180

Query: 256 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSA 315
           LRK++GN SK GCT+IFLNQ+R KIG+ YGNPE T+GG+ALKF+AS+RL+IR +  LK  
Sbjct: 181 LRKINGNISKTGCTVIFLNQLRQKIGLTYGNPETTTGGVALKFYASVRLDIRRVQTLK-- 240

Query: 316 KGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKK 375
           KG EE GIR +V+V K+KV+ P++ AEF+IIFG+G+  L     GCILD AE + ++ +K
Sbjct: 241 KGTEEFGIRAKVKVAKNKVAPPFRIAEFDIIFGKGIANL-----GCILDMAEEVGVITRK 300

Query: 376 GSWYSYGDHRFA 388
           G+WYSY     A
Sbjct: 301 GAWYSYNGENLA 305

[Close]
BLAST of ClCG11G016290 vs. Swiss-Prot
Match: RECA_CYAP7 (Protein RecA OS=Cyanothece sp. (strain PCC 7424) GN=recA PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.6e-102
Identity = 189/301 (62.79%), Postives = 234/301 (77.74%), Query Frame = 1 

Query: 88  QKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFG 147
           ++KAL   +N+I  SFGKGS+ RLG A    VET PSG LTLD ALGGGLPKGR++EI+G
Sbjct: 10  KEKALNLVLNQIERSFGKGSIMRLGDAARMRVETIPSGALTLDLALGGGLPKGRVIEIYG 69

Query: 148 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMAL 207
           PESSGKTTLALHAIAEVQK GG A  VDAEHA DP YS+ +GVD+ NL+V QPD GE AL
Sbjct: 70  PESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEVLGVDIHNLLVAQPDTGESAL 129

Query: 208 EIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAG 267
           EI D++ RS AVD++ VDSV+AL PRAEIEGE+G  Q+GLQARLMS+ALRK++GN  K+G
Sbjct: 130 EIVDQLVRSAAVDIVVVDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKSG 189

Query: 268 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDE-EIGIRVR 327
           C +IFLNQ+R KIGV YG+PEVT+GG ALKF+AS+RL+IR I  LK  KG E E GIR +
Sbjct: 190 CVVIFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRAK 249

Query: 328 VRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGDHRF 387
           V+V K+KV+ P++ AEF+IIFG+G+ ++     GC++D AE  D++ +KG+WYSY     
Sbjct: 250 VKVAKNKVAPPFRIAEFDIIFGKGISQM-----GCMIDMAEHTDVITRKGAWYSYNGENI 303

[Close]
BLAST of ClCG11G016290 vs. Swiss-Prot
Match: RECA_ARTPT (Protein RecA OS=Arthrospira platensis GN=recA PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.7e-102
Identity = 184/298 (61.74%), Postives = 233/298 (78.19%), Query Frame = 1 

Query: 86  SSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEI 145
           S ++KAL + +N+I  SFGKGS+ RLG +    VET  SG LTLD ALGGGLP+GR++EI
Sbjct: 8   SEKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEI 67

Query: 146 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEM 205
           +GPESSGKTTLALHAIAE+QK GG A  VDAEHA DP Y+ A+GVD+ENL+V QPD GEM
Sbjct: 68  YGPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEM 127

Query: 206 ALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASK 265
           ALEI D++ RS AVD++ VDSV+AL PRAEIEG++G   MGLQARLMSQALRK++GN  K
Sbjct: 128 ALEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGK 187

Query: 266 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGIRV 325
           +GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+AS+RL+IR    LK  KG +E GIR 
Sbjct: 188 SGCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRA 247

Query: 326 RVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGD 384
           +V+V K+KV+ P++ AEF+IIFG+G+  +     GC++D AE   ++ +KG+WYSY +
Sbjct: 248 KVKVAKNKVAPPFRIAEFDIIFGQGISTI-----GCLIDLAEETGVIKRKGAWYSYNN 298

[Close]
BLAST of ClCG11G016290 vs. Swiss-Prot
Match: RECA_SYNP2 (Protein RecA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=recA PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 3.1e-101
Identity = 188/299 (62.88%), Postives = 237/299 (79.26%), Query Frame = 1 

Query: 88  QKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFG 147
           ++KAL   +N+I  +FGKG++ RLG A    V T PSG LTLD A+GGG P+GRIVEI+G
Sbjct: 10  KEKALNLVLNQIERNFGKGAIMRLGDAAQMKVATIPSGALTLDQAMGGGFPRGRIVEIYG 69

Query: 148 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMAL 207
           PESSGKTT+ALHAIAEVQK GG A  +DAEHA DP YS A+GVD+ENL+V QPD+GE AL
Sbjct: 70  PESSGKTTVALHAIAEVQKAGGVAAFIDAEHALDPTYSAALGVDIENLLVAQPDNGESAL 129

Query: 208 EIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAG 267
           EIAD++ RS AVDLI +DSV+AL PRAEIEGE+G  Q+GLQARLMS+ALRK++GN  ++G
Sbjct: 130 EIADQLVRSAAVDLIVIDSVAALVPRAEIEGEMGDVQVGLQARLMSKALRKIAGNMGRSG 189

Query: 268 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDE-EIGIRVR 327
           CT+IFLNQ+R KIG+ YGNPEVT+GG ALKF+AS+RL+IR I  LK  KG E E GIR +
Sbjct: 190 CTVIFLNQLRQKIGISYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEFGIRAK 249

Query: 328 VRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSY-GDH 385
           V+V K+KV+ P++ AEF+IIFG+G+ ++     GC+LD AE   ++ +KG+WYSY GD+
Sbjct: 250 VKVAKNKVAPPFRIAEFDIIFGKGISRV-----GCMLDLAEQTGVITRKGAWYSYEGDN 301

[Close]
BLAST of ClCG11G016290 vs. TrEMBL
Match: A0A0A0LBT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G524580 PE=3 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 2.9e-199
Identity = 372/442 (84.16%), Postives = 378/442 (85.52%), Query Frame = 1 

Query: 1   MDFVSNSLACKTLPCRTLFPPCATSSRRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSS 60
           M F+SNS+ CKTLPCRTLFP CA SS  RQWLPSSL NAGKRVRELRCEFEVN+NGALS 
Sbjct: 1   MIFISNSMPCKTLPCRTLFPQCAASSGPRQWLPSSLSNAGKRVRELRCEFEVNLNGALSG 60

Query: 61  DFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVE 120
           DFDPRSVDR                   KKALEAAMN+IN SFGKGSVTRLGSAGGALVE
Sbjct: 61  DFDPRSVDR-------------------KKALEAAMNDINGSFGKGSVTRLGSAGGALVE 120

Query: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180
           TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180

Query: 181 DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240
           DP YSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI
Sbjct: 181 DPTYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240

Query: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300
           GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA
Sbjct: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300

Query: 301 SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGG 360
           SLRLEIR IGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     G
Sbjct: 301 SLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----G 360

Query: 361 CILDCAEIMDIVVKKGSWYSYGDHRF-----------------------AVQTMLTSGTV 420
           CILDCAEIM+IVVKKGSWYSYGD R                         +QTMLTSGTV
Sbjct: 361 CILDCAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTV 417

[Close]
BLAST of ClCG11G016290 vs. TrEMBL
Match: D7SX10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00210 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 7.5e-163
Identity = 309/405 (76.30%), Postives = 331/405 (81.73%), Query Frame = 1 

Query: 39  AGKRVRELRCEFEVNVNGALSSDFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNE 98
           A ++   LRCEFEV VNGALSSD DPR +DR                   +KALEAAMN+
Sbjct: 3   AKRQQMRLRCEFEVKVNGALSSDPDPRFLDR-------------------QKALEAAMND 62

Query: 99  INSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLAL 158
           INSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLAL
Sbjct: 63  INSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLAL 122

Query: 159 HAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGA 218
           HAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPDHGEMALEIADRMCRSGA
Sbjct: 123 HAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGA 182

Query: 219 VDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 278
           +DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY
Sbjct: 183 IDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 242

Query: 279 KIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPY 338
           KIGVYYGNPEVTSGGIALKFFASLRLEIRPIGK+KS+KGDE+IG+RVRVRVQKSKVSRPY
Sbjct: 243 KIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPY 302

Query: 339 KQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGDHRFAV---------- 398
           KQAEFEIIFGEGV KL     GCILDCAE+MD+VVKKGSWYSYGD+R             
Sbjct: 303 KQAEFEIIFGEGVSKL-----GCILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLR 362

Query: 399 -------------QTMLTSGTVQMGFQSIR--KPLPNQEEVLEEL 419
                        + M+  G  Q+G   +R     P  E++LEE+
Sbjct: 363 ENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEEI 383

[Close]
BLAST of ClCG11G016290 vs. TrEMBL
Match: M5WSD7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007080mg PE=3 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 1.4e-161
Identity = 304/399 (76.19%), Postives = 326/399 (81.70%), Query Frame = 1 

Query: 39  AGKRVRELRCEFEVNVNGALSSDFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNE 98
           A K ++ +RCE +  VNGALS+D DPR +DR                   +KALEAAMN+
Sbjct: 2   AVKPIKRVRCELQAKVNGALSADSDPRFIDR-------------------QKALEAAMND 61

Query: 99  INSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLAL 158
           INSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEIFGPESSGKTTLAL
Sbjct: 62  INSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLAL 121

Query: 159 HAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGA 218
           HAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPDHGEMALEIADRMCRSGA
Sbjct: 122 HAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGA 181

Query: 219 VDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 278
           +DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY
Sbjct: 182 IDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 241

Query: 279 KIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPY 338
           KIGVYYGNPEVTSGGIALKFFAS+RLEIR  GK+KS KGDEEIG+RVRVRVQKSKVSRPY
Sbjct: 242 KIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPY 301

Query: 339 KQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGDHRFAV---------- 398
           KQAEFEI+FGEGVGKL     GCILDCAE MD+VVKKGSWYSYGDHR             
Sbjct: 302 KQAEFEIVFGEGVGKL-----GCILDCAETMDVVVKKGSWYSYGDHRLGQGRDKALQYLR 361

Query: 399 -------------QTMLTSGTVQMG-FQSIRKPLPNQEE 414
                        ++M+T GT Q+G   +    +P Q+E
Sbjct: 362 ENPLLLDEIEKIVRSMITDGTGQVGTLHTSNLQIPQQDE 376

[Close]
BLAST of ClCG11G016290 vs. TrEMBL
Match: A0A0B0Q050_GOSAR (DNA repair protein recA 1, chloroplastic OS=Gossypium arboreum GN=F383_13888 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 7.7e-160
Identity = 301/368 (81.79%), Postives = 317/368 (86.14%), Query Frame = 1 

Query: 21  PCATSSRRRQWLPSSLFN---AGKRVRELRCEFEVNVNGALSSDFDPRSVDRVALLAVIS 80
           P  T  +RR  L SS F    A K  R++ CEFE  VNGALS D D R +DR        
Sbjct: 19  PLQTHFQRRPLLTSSHFRLAAAKKPPRKVLCEFEPKVNGALSPDPDSRFLDR-------- 78

Query: 81  FSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGL 140
                      +KALEAAMN+INSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGL
Sbjct: 79  -----------QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGL 138

Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIV 200
           PKGRIVE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIV
Sbjct: 139 PKGRIVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIV 198

Query: 201 CQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 260
           CQPD+GEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR
Sbjct: 199 CQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 258

Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKG 320
           KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIRP GK+KS KG
Sbjct: 259 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPTGKIKSVKG 318

Query: 321 DEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGS 380
           DE+IG+RVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     GCILDCAE+MD+V KKGS
Sbjct: 319 DEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----GCILDCAEMMDVVTKKGS 362

Query: 381 WYSYGDHR 386
           WYSYGDHR
Sbjct: 379 WYSYGDHR 362

[Close]
BLAST of ClCG11G016290 vs. TrEMBL
Match: A0A061FAA4_THECC (RecA DNA recombination family protein isoform 1 OS=Theobroma cacao GN=TCM_032483 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 1.3e-159
Identity = 307/420 (73.10%), Postives = 334/420 (79.52%), Query Frame = 1 

Query: 21  PCATSSRRRQWLPSS---LFNAGKRVRELRCEFEVNVNGALSSDFDPRSVDRVALLAVIS 80
           P     R+R  L SS   L    KR+R++ CEFE  VNGALS + D R +DR        
Sbjct: 84  PLQNHFRQRPPLTSSHLPLAAVKKRLRKVHCEFEPRVNGALSPNSDSRFLDR-------- 143

Query: 81  FSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGL 140
                      +KALEAAMN+INSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGL
Sbjct: 144 -----------QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGL 203

Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIV 200
           PKGRIVE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIV
Sbjct: 204 PKGRIVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIV 263

Query: 201 CQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 260
           CQPD+GEMALEIADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR
Sbjct: 264 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 323

Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKG 320
           KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIRP GK+KS KG
Sbjct: 324 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPSGKIKSVKG 383

Query: 321 DEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGS 380
           DE+IG+RVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     GCILDCAE+MD+VVKKGS
Sbjct: 384 DEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----GCILDCAEMMDVVVKKGS 443

Query: 381 WYSYGDHRFA-----------------------VQTMLTSGTVQMGFQSIRK-PLPNQEE 414
           WYSYG+HR                         V++M+  GT+ M    ++   LP Q+E
Sbjct: 444 WYSYGEHRLGQGRDKALQYLRDNPVLHGEIEKIVRSMMADGTLHMSSAPVKSLSLPPQDE 479

[Close]
BLAST of ClCG11G016290 vs. TAIR10
Match: AT1G79050.1 (AT1G79050.1 recA DNA recombination family protein)

HSP 1 Score: 550.1 bits (1416), Expect = 1.2e-156
Identity = 289/374 (77.27%), Postives = 312/374 (83.42%), Query Frame = 1 

Query: 14  PCRTLFPPCATSS--RRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSSDFDPRSVDRVA 73
           PC +  P    SS   RR + P +++ A K   ++  EF+  +NGALS D D R +DR  
Sbjct: 26  PCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDR-- 85

Query: 74  LLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDC 133
                            +KALEAAMN+INSSFGKGSVTRLGSAGGALVETF SG LTLD 
Sbjct: 86  -----------------QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDL 145

Query: 134 ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVD 193
           ALGGGLPKGR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVD
Sbjct: 146 ALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD 205

Query: 194 VENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL 253
           VENLIVCQPD+GEMALE ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL
Sbjct: 206 VENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL 265

Query: 254 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGK 313
           MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIR  GK
Sbjct: 266 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGK 325

Query: 314 LKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDI 373
           +KS+KGDE+IG+R RVRVQKSKVSRPYKQAEFEI+FGEGV KL     GC+LDCAEIM++
Sbjct: 326 IKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKL-----GCVLDCAEIMEV 375

Query: 374 VVKKGSWYSYGDHR 386
           VVKKGSWYSY D R
Sbjct: 386 VVKKGSWYSYEDQR 375

[Close]
BLAST of ClCG11G016290 vs. TAIR10
Match: AT2G19490.1 (AT2G19490.1 recA DNA recombination family protein)

HSP 1 Score: 282.0 bits (720), Expect = 6.2e-76
Identity = 158/340 (46.47%), Postives = 228/340 (67.06%), Query Frame = 1 

Query: 85  VSSQKKALEAAMNEINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDCALG-GGLPKGRI 144
           +S ++ AL+ A+++I SSFGKGS+  LG A     V  F +G   LD ALG GGLPKGR+
Sbjct: 55  MSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRV 114

Query: 145 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDH 204
           VEI+GPE+SGKTTLALH IAE QK GG  + VDAEHA D + +KA+GV+ ENL++ QPD 
Sbjct: 115 VEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDC 174

Query: 205 GEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 264
           GE AL + D + RSG+VD+I VDSV+AL P+ E+EGE+G   M +QARLMSQALRK+S +
Sbjct: 175 GEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHS 234

Query: 265 ASKAGCTLIFLNQIRYKIGVY--YGNP-EVTSGGIALKFFASLRLEIRPIGKLKSAKGDE 324
            S +   LIF+NQ+R K+  +  +G P EVT GG ALKF+AS+RL I+ IG +K  KG+E
Sbjct: 235 LSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIK--KGEE 294

Query: 325 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWY 384
             G +V V++ K+K++ P++ A+FE+ FG+G+ K+       I+D +     + K G++Y
Sbjct: 295 TTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITE-----IIDLSIKHKFIAKNGTFY 354

Query: 385 SYGDHRFAVQTMLTSGTVQMGFQSIRKPLPNQEEVLEELE 420
           +     +  +  L         + +++   +QEE++++L+
Sbjct: 355 NLNGKNYHGKEALK--------RFLKQNESDQEELMKKLQ 379

[Close]
BLAST of ClCG11G016290 vs. TAIR10
Match: AT3G10140.1 (AT3G10140.1 RECA homolog 3)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-48
Identity = 112/271 (41.33%), Postives = 171/271 (63.10%), Query Frame = 1 

Query: 85  VSSQKKALEAAMNEINSSFGKGSVTRLGSA-GGALVETFPSGCLTLDCALG-GGLPKGRI 144
           V+ +  AL  A+++++  F K S   L        V    +G L LD ALG GGLPKGR+
Sbjct: 59  VAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRM 118

Query: 145 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDH 204
           VE++G E+SGKTTLALH I E QKLGG    +DAE+A DP+ ++++GV+ E L++ +P  
Sbjct: 119 VEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSS 178

Query: 205 GEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 264
            E  L I D + +SG+VD+I VDSV+AL P+ E++  +G +    Q+R+M+QALRK+  +
Sbjct: 179 AEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYS 238

Query: 265 ASKAGCTLIFLNQIR--YKIGVYYGN-PEVTSGGIALKFFASLRLEIRPIGKLKSAKGDE 324
              +   ++FLNQ+R   K  +++ +  EVT GG AL F A++RL++   G +K+A  ++
Sbjct: 239 VGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTA--NK 298

Query: 325 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEG 351
             G+ V V+V K+K++   K++E  I FG G
Sbjct: 299 ISGLNVCVQVVKNKLAPGKKKSELGIHFGHG 327

[Close]
BLAST of ClCG11G016290 vs. TAIR10
Match: AT3G32920.1 (AT3G32920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-44
Identity = 101/202 (50.00%), Postives = 136/202 (67.33%), Query Frame = 1 

Query: 119 VETFPSGCLTLDCALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 178
           V  F +G   LD ALG GGLPKGR+VEI+GPE+SGKT LALH ++         +L+ + 
Sbjct: 12  VPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLS--------MLLIRS- 71

Query: 179 HAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIE 238
                  +KA+GV+ ENL++ QPD G+ AL + D + +SG+VD+I VDSV+AL P+ E++
Sbjct: 72  ------LAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELD 131

Query: 239 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 298
           GE+G   M +QARLMSQALRK S +   +   LIF+NQ+R + G   G  EVTSGG ALK
Sbjct: 132 GEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRERFG---GPTEVTSGGNALK 191

Query: 299 FFASLRLEIRPIGKLKSAKGDE 320
           F+A +RL+I+ IG +K  KG+E
Sbjct: 192 FYAPMRLDIKRIGLIK--KGEE 193

[Close]
BLAST of ClCG11G016290 vs. NCBI nr
Match: gi|659087097|ref|XP_008444273.1| (PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 710.7 bits (1833), Expect = 1.5e-201
Identity = 377/442 (85.29%), Postives = 380/442 (85.97%), Query Frame = 1 

Query: 1   MDFVSNSLACKTLPCRTLFPPCATSSRRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSS 60
           M  VSNSL CKTLPCRTLFPPCATSSR RQWLPSSL NA  RVRELRCEFEVNVNGALS 
Sbjct: 1   MVLVSNSLPCKTLPCRTLFPPCATSSRPRQWLPSSLSNASNRVRELRCEFEVNVNGALSG 60

Query: 61  DFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVE 120
           DFDPRSVDR                   KKALEAAMN+IN SFGKGSVTRLGSAGGALVE
Sbjct: 61  DFDPRSVDR-------------------KKALEAAMNDINGSFGKGSVTRLGSAGGALVE 120

Query: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180
           TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180

Query: 181 DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240
           DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI
Sbjct: 181 DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240

Query: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300
           GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA
Sbjct: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300

Query: 301 SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGG 360
           SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     G
Sbjct: 301 SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----G 360

Query: 361 CILDCAEIMDIVVKKGSWYSYGDHRF-----------------------AVQTMLTSGTV 420
           CILDCAEIM+IVVKKGSWYSYGD R                         +QTMLTSGTV
Sbjct: 361 CILDCAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYLKDTPALQDEIEKTLQTMLTSGTV 417

[Close]
BLAST of ClCG11G016290 vs. NCBI nr
Match: gi|449466614|ref|XP_004151021.1| (PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 702.6 bits (1812), Expect = 4.2e-199
Identity = 372/442 (84.16%), Postives = 378/442 (85.52%), Query Frame = 1 

Query: 1   MDFVSNSLACKTLPCRTLFPPCATSSRRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSS 60
           M F+SNS+ CKTLPCRTLFP CA SS  RQWLPSSL NAGKRVRELRCEFEVN+NGALS 
Sbjct: 1   MIFISNSMPCKTLPCRTLFPQCAASSGPRQWLPSSLSNAGKRVRELRCEFEVNLNGALSG 60

Query: 61  DFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVE 120
           DFDPRSVDR                   KKALEAAMN+IN SFGKGSVTRLGSAGGALVE
Sbjct: 61  DFDPRSVDR-------------------KKALEAAMNDINGSFGKGSVTRLGSAGGALVE 120

Query: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180
           TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180

Query: 181 DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240
           DP YSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI
Sbjct: 181 DPTYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240

Query: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300
           GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA
Sbjct: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300

Query: 301 SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGG 360
           SLRLEIR IGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     G
Sbjct: 301 SLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----G 360

Query: 361 CILDCAEIMDIVVKKGSWYSYGDHRF-----------------------AVQTMLTSGTV 420
           CILDCAEIM+IVVKKGSWYSYGD R                         +QTMLTSGTV
Sbjct: 361 CILDCAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTV 417

[Close]
BLAST of ClCG11G016290 vs. NCBI nr
Match: gi|659087101|ref|XP_008444275.1| (PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 624.8 bits (1610), Expect = 1.1e-175
Identity = 323/352 (91.76%), Postives = 324/352 (92.05%), Query Frame = 1 

Query: 1   MDFVSNSLACKTLPCRTLFPPCATSSRRRQWLPSSLFNAGKRVRELRCEFEVNVNGALSS 60
           M  VSNSL CKTLPCRTLFPPCATSSR RQWLPSSL NA  RVRELRCEFEVNVNGALS 
Sbjct: 1   MVLVSNSLPCKTLPCRTLFPPCATSSRPRQWLPSSLSNASNRVRELRCEFEVNVNGALSG 60

Query: 61  DFDPRSVDRVALLAVISFSDIAIFVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVE 120
           DFDPRSVDR                   KKALEAAMN+IN SFGKGSVTRLGSAGGALVE
Sbjct: 61  DFDPRSVDR-------------------KKALEAAMNDINGSFGKGSVTRLGSAGGALVE 120

Query: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180
           TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 121 TFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 180

Query: 181 DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240
           DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI
Sbjct: 181 DPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEI 240

Query: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300
           GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA
Sbjct: 241 GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 300

Query: 301 SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVG 353
           SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVG
Sbjct: 301 SLRLEIRPIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVG 333

[Close]
BLAST of ClCG11G016290 vs. NCBI nr
Match: gi|659087099|ref|XP_008444274.1| (PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.5e-169
Identity = 318/359 (88.58%), Postives = 323/359 (89.97%), Query Frame = 1 

Query: 84  FVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIV 143
           ++ SQKKALEAAMN+IN SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIV
Sbjct: 16  YLLSQKKALEAAMNDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIV 75

Query: 144 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHG 203
           EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHG
Sbjct: 76  EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHG 135

Query: 204 EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 263
           EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA
Sbjct: 136 EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 195

Query: 264 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGI 323
           SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGI
Sbjct: 196 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGI 255

Query: 324 RVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGD 383
           RVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     GCILDCAEIM+IVVKKGSWYSYGD
Sbjct: 256 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----GCILDCAEIMEIVVKKGSWYSYGD 315

Query: 384 HRF-----------------------AVQTMLTSGTVQMGFQSIRKPLPNQEEVLEELE 420
            R                         +QTMLTSGTVQMGFQSIRKPLPNQ EVLEE E
Sbjct: 316 QRLGQGRDRALQYLKDTPALQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQ-EVLEEFE 368

[Close]
BLAST of ClCG11G016290 vs. NCBI nr
Match: gi|778681518|ref|XP_011651531.1| (PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 3.8e-168
Identity = 316/359 (88.02%), Postives = 321/359 (89.42%), Query Frame = 1 

Query: 84  FVSSQKKALEAAMNEINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIV 143
           ++ SQKKALEAAMN+IN SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIV
Sbjct: 16  YLLSQKKALEAAMNDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIV 75

Query: 144 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHG 203
           EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQPDHG
Sbjct: 76  EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQPDHG 135

Query: 204 EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 263
           EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA
Sbjct: 136 EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 195

Query: 264 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDEEIGI 323
           SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR IGKLKSAKGDEEIGI
Sbjct: 196 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGI 255

Query: 324 RVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLVSILGGCILDCAEIMDIVVKKGSWYSYGD 383
           RVRVRVQKSKVSRPYKQAEFEIIFGEGV KL     GCILDCAEIM+IVVKKGSWYSYGD
Sbjct: 256 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKL-----GCILDCAEIMEIVVKKGSWYSYGD 315

Query: 384 HRF-----------------------AVQTMLTSGTVQMGFQSIRKPLPNQEEVLEELE 420
            R                         +QTMLTSGTVQMGFQSIRKPLPNQ EVLEE E
Sbjct: 316 QRLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQ-EVLEEFE 368

The following BLAST results are available for this feature:
BLAST of ClCG11G016290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RECAC_ARATH2.2e-15577.27DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA... [more]
RECA_THEEB8.6e-10461.54Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) GN=recA PE=3 SV=1[more]
RECA_CYAP71.6e-10262.79Protein RecA OS=Cyanothece sp. (strain PCC 7424) GN=recA PE=3 SV=1[more]
RECA_ARTPT4.7e-10261.74Protein RecA OS=Arthrospira platensis GN=recA PE=3 SV=1[more]
RECA_SYNP23.1e-10162.88Protein RecA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=recA ... [more]
BLAST of ClCG11G016290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBT0_CUCSA2.9e-19984.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G524580 PE=3 SV=1[more]
D7SX10_VITVI7.5e-16376.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00210 PE=3 SV=... [more]
M5WSD7_PRUPE1.4e-16176.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007080mg PE=3 SV=1[more]
A0A0B0Q050_GOSAR7.7e-16081.79DNA repair protein recA 1, chloroplastic OS=Gossypium arboreum GN=F383_13888 PE=... [more]
A0A061FAA4_THECC1.3e-15973.10RecA DNA recombination family protein isoform 1 OS=Theobroma cacao GN=TCM_032483... [more]
BLAST of ClCG11G016290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79050.11.2e-15677.27 recA DNA recombination family protein[more]
AT2G19490.16.2e-7646.47 recA DNA recombination family protein[more]
AT3G10140.11.4e-4841.33 RECA homolog 3[more]
AT3G32920.12.8e-4450.00 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of ClCG11G016290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087097|ref|XP_008444273.1|1.5e-20185.29PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X1 [Cucumis ... [more]
gi|449466614|ref|XP_004151021.1|4.2e-19984.16PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X1 [Cucumis ... [more]
gi|659087101|ref|XP_008444275.1|1.1e-17591.76PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X3 [Cucumis ... [more]
gi|659087099|ref|XP_008444274.1|1.5e-16988.58PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X2 [Cucumis ... [more]
gi|778681518|ref|XP_011651531.1|3.8e-16888.02PREDICTED: DNA repair protein recA homolog 1, chloroplastic isoform X2 [Cucumis ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR013765DNA_recomb/repair_RecA
IPR020584DNA_recomb/repair_RecA_CS
IPR020587RecA_monomer-monomer_interface
IPR020588RecA_ATP-bd
IPR023400RecA_C
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
GO:0005524ATP binding
GO:0003677DNA binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006259DNA metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009691 cytokinin biosynthetic process
biological_process GO:0000002 mitochondrial genome maintenance
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0042148 strand invasion
biological_process GO:0010212 response to ionizing radiation
biological_process GO:0006312 mitotic recombination
biological_process GO:0000730 DNA recombinase assembly
biological_process GO:0006308 DNA catabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0009408 response to heat
biological_process GO:0006310 DNA recombination
biological_process GO:0006259 DNA metabolic process
biological_process GO:0009432 SOS response
biological_process GO:0007131 reciprocal meiotic recombination
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0004520 endodeoxyribonuclease activity
molecular_function GO:0000400 four-way junction DNA binding
molecular_function GO:0000150 recombinase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G016290.1ClCG11G016290.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 139..310
score: 4.0
IPR013765DNA recombination and repair protein RecAPRINTSPR00142RECAcoord: 175..204
score: 3.8E-65coord: 327..356
score: 3.8E-65coord: 292..320
score: 3.8E-65coord: 209..238
score: 3.8E-65coord: 247..276
score: 3.8
IPR013765DNA recombination and repair protein RecAPFAMPF00154RecAcoord: 90..351
score: 8.9E
IPR013765DNA recombination and repair protein RecATIGRFAMsTIGR02012TIGR02012coord: 88..387
score: 1.7E
IPR020584DNA recombination/repair protein RecA, conserved sitePROSITEPS00321RECA_1coord: 295..303
scor
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROFILEPS50163RECA_3coord: 281..356
score: 27
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 118..276
score: 28
IPR023400DNA recombination and repair protein RecA, C-terminalGENE3DG3DSA:3.30.250.10coord: 360..419
score: 8.
IPR023400DNA recombination and repair protein RecA, C-terminalunknownSSF54752RecA protein, C-terminal domaincoord: 360..387
score: 1.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 119..351
score: 1.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 88..351
score: 9.69
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 42..383
score: 4.6E
NoneNo IPR availablePANTHERPTHR22942:SF37DNA REPAIR PROTEIN RECA HOMOLOG 1, CHLOROPLASTICcoord: 42..383
score: 4.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG11G016290MELO3C010554Melon (DHL92) v3.5.1mewcgB462
ClCG11G016290Cla023218Watermelon (97103) v1wcgwmB103
ClCG11G016290Cla97C11G222250Watermelon (97103) v2wcgwmbB064
ClCG11G016290Bhi09G002343Wax gourdwcgwgoB184
ClCG11G016290Cucsa.018030Cucumber (Gy14) v1cgywcgB461
ClCG11G016290CmaCh01G013390Cucurbita maxima (Rimu)cmawcgB393
ClCG11G016290CmoCh01G013960Cucurbita moschata (Rifu)cmowcgB391
ClCG11G016290Lsi04G018650Bottle gourd (USVL1VR-Ls)lsiwcgB259
ClCG11G016290Cp4.1LG02g02710Cucurbita pepo (Zucchini)cpewcgB488
ClCG11G016290MELO3C010554.2Melon (DHL92) v3.6.1medwcgB455
ClCG11G016290Carg24697Silver-seed gourdcarwcgB0620
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG11G016290Cucurbita pepo (Zucchini)cpewcgB695
ClCG11G016290Silver-seed gourdcarwcgB1018
ClCG11G016290Cucurbita maxima (Rimu)cmawcgB016
ClCG11G016290Cucurbita moschata (Rifu)cmowcgB009