ClCG11G016120 (gene) Watermelon (Charleston Gray)

NameClCG11G016120
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr11 : 29429054 .. 29430166 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAATGTTTTTTATTATTATCATTATTAAGAAAAATTGTAAATTCAGTCTTCAATCTGTCTGTCTGTCTCTAGGTATTTGACTAGTGATGAAGATGAAGTCTCAAGTTTTACAAGTCAAGAGAGAAAATGATGAAATTTCCACCACTAACCTCCAAGAGTCGTTCCTTTTTTCCAATACCATGATTTAAACTCCCACTTCTTCCTTCGATCTTCTTCAGCACGTCATGGAAAAGCCCCCTTTTTCTAGGTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTTACCCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAGTGAGCTTCTTTTTCACTTTCTTTATCTTTCCTATTTTTCAATATTGATTTTTGCATACATATTGAAATTTCCTGGATGATCCACAAAATCGGAAATTTGTTGTAGAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCCAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACACCACAATCTACCATAGCTATTGGCCAAAAGAGCATAGAAAAAGTTGCAGTGTTAAAACGCCTCTGCTTTCAATAACCCTTCTCATCTCTTGGTCGGTAATTCCTTCTCCATACTAATCTTCTTTTCTTCTTATTTTTCACTTTATAATAAAAAAAATTATTAAAAGAAATATATATAAAAATATGAGTTATTTTCAAATATAGACGGTGTGATAAATAGTGAAATTTTTCTATGTTTGTTAATAGTTTGATAGTTTTTATTTTTATAATAATTTTTCTAAAAAGGCATGATCTCCTTCTTCCGTGAAGCTTCCATCTCTCATCCATATAGTTGTCATATTGAAAAATAAAATAAATATATTTGAGAGGGCCAAACAAAGCTGTAATCTTAAAGTAGAAAACTGAAGTTTTATGCTAGTTGAACGTATTTTTAGTTGGATATATATATTTTAGTCAACCTCGAGATTGTGTTTATTTTGTCTACTTTTGAAAACTGTCTAATAGCATTGTTAGATAGAAGTTTGAATTTTATGTTGAATAGGTTTGAATTTTCAATAGTTT

mRNA sequence

CTAAAATGTTTTTTATTATTATCATTATTAAGAAAAATTGTAAATTCAGTCTTCAATCTGTCTGTCTGTCTCTAGGTATTTGACTAGTGATGAAGATGAAGTCTCAAGTTTTACAAGTCAAGAGAGAAAATGATGAAATTTCCACCACTAACCTCCAAGAGTCGTTCCTTTTTTCCAATACCATGATTTAAACTCCCACTTCTTCCTTCGATCTTCTTCAGCACGTCATGGAAAAGCCCCCTTTTTCTAGGTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTTACCCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCCAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACACCACAATCTACCATAGCTATTGGCCAAAAGAGCATAGAAAAAGTTGCAGTGTTAAAACGCCTCTGCTTTCAATAACCCTTCTCATCTCTTGGTCGGTAATTCCTTCTCCATACTAATCTTCTTTTCTTCTTATTTTTCACTTTATAATAAAAAAAATTATTAAAAGAAATATATATAAAAATATGAGTTATTTTCAAATATAGACGGTGTGATAAATAGTGAAATTTTTCTATGTTTGTTAATAGTTTGATAGTTTTTATTTTTATAATAATTTTTCTAAAAAGGCATGATCTCCTTCTTCCGTGAAGCTTCCATCTCTCATCCATATAGTTGTCATATTGAAAAATAAAATAAATATATTTGAGAGGGCCAAACAAAGCTGTAATCTTAAAGTAGAAAACTGAAGTTTTATGCTAGTTGAACGTATTTTTAGTTGGATATATATATTTTAGTCAACCTCGAGATTGTGTTTATTTTGTCTACTTTTGAAAACTGTCTAATAGCATTGTTAGATAGAAGTTTGAATTTTATGTTGAATAGGTTTGAATTTTCAATAGTTT

Coding sequence (CDS)

ATGGAAAAGCCCCCTTTTTCTAGGTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTTACCCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCCAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACACCACAATCTACCATAGCTATTGGCCAAAAGAGCATAGAAAAAGTTGCAGTGTTAAAACGCCTCTGCTTTCAATAACCCTTCTCATCTCTTGGTCGGTAATTCCTTCTCCATACTAA

Protein sequence

MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVGGLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLLISWSVIPSPY
BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A0A0L099_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.6e-42
Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 1

Query: 1   MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVG 60
           ME P  S FVISFS+VA+LTLASFASC+AAEFNRTKK+DLKLN + CFLPESEAF+LG+G
Sbjct: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115

Query: 61  GLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLLISW 105
           GL+CLIMAQIIG T I HSYWPKEHRKSCSVK PLLSI LLISW
Sbjct: 116 GLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISW 159

BLAST of ClCG11G016120 vs. TrEMBL
Match: D7TFD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00640 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.7e-18
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1

Query: 1   MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVG 60
           MEK  F+  +I  SI+A L L +F  C+AAEF R+KKKD+KLNG+ C+L ES AFQLGV 
Sbjct: 1   MEKHRFASLLIP-SIIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVA 60

Query: 61  GLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLL-ISW 105
            L+CL +A I+GN  I       E   S   KTP ++ TLL +SW
Sbjct: 61  ALICLFIAHILGNMVICRRICSGEKSSSGKAKTPWITSTLLVVSW 104

BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A068UFA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.5e-17
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1

Query: 10  VISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVGGLVCLIMAQ 69
           ++  S++ +L L SF+ C AAEF R+KK+DL+ NG+ C+L  SE F LGV  LV L +AQ
Sbjct: 11  ILLLSLIIILGLISFSLCFAAEFKRSKKEDLRFNGKLCYLAGSEGFDLGVAALVFLFIAQ 70

Query: 70  IIGNTTIYHSYWPKEHRKSCSVKTP-LLSITLLISW 105
           IIGN  +   +W + H + C  K P ++ I+L++SW
Sbjct: 71  IIGNLLVCCKFWSRSHERGCKTKQPKIVIISLVLSW 106

BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A061G695_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016706 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-16
Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1

Query: 9   FVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVGGLVCLIMA 68
           FV+ FS +A L L SFASC+ AE  R KK DLKL+G+ CFLP S AF  GV  L+CL +A
Sbjct: 8   FVLIFSAIASLGLVSFASCLVAEAKRPKKGDLKLDGKLCFLPTSRAFGFGVAALICLSIA 67

Query: 69  QIIGNTTIYHSYWPKEHRKSCSVKTPLL-SITLLISW 105
           QIIGN  I+ + W +   K+   K P L +I L ISW
Sbjct: 68  QIIGNVAIWANCWWR--GKARKAKKPFLTAILLAISW 102

BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A0A0KYL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-16
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1

Query: 9   FVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVGGLVCLIMA 68
           + +S SIV  L L +F SC+AAE +RTK KDLKL+G+ C+LPES+AF  GV  L CL+MA
Sbjct: 8   YALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAALACLVMA 67

Query: 69  QIIGNTTIYHSYWPKEHRKSCSVKTP----LLSITLLISWS 106
           Q+IGN  +  S       K  S + P    L +  L++SW+
Sbjct: 68  QVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWA 108

BLAST of ClCG11G016120 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218))

HSP 1 Score: 70.9 bits (172), Expect = 5.7e-13
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 13  FSIVAVLTLASFASCIAAEFNRTKKKDLKLNG-RFCFLPESEAFQLGVGGLVCLIMAQII 72
           +S+V  L L SF +C AAEF RT+K+D++ +  R C++P S AF LG   ++C  +AQI+
Sbjct: 7   YSVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIV 66

Query: 73  GNTTIYHSYWPKEHRKSCSVKTPLL--SITLLISWS 106
           GN  ++ ++  +  R+     T L   ++ LL+SWS
Sbjct: 67  GNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWS 102

BLAST of ClCG11G016120 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218))

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 37/102 (36.27%), Postives = 52/102 (50.98%), Query Frame = 1

Query: 13  FSIVAVLTLASFASCIAAEFNRTKK----------KDLKLNGRFCFLPESEAFQLGVGGL 72
           F  + +  LA+F  C++AEF + K           KDLK +G  C+LPE+ AF LG+  L
Sbjct: 19  FMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIAAL 78

Query: 73  VCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLLISW 105
           VC+ +AQI+GN  I   +   +  ++    T    I LL SW
Sbjct: 79  VCVSVAQIVGNVVICRGFTKTDKTRT----TIFCIILLLFSW 116

BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|659087031|ref|XP_008444240.1| (PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 1

Query: 1   MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVG 60
           MEKP  S FVISFSIVA+LTLASFASC+AAEFNRTKK+DLKLNG+FCFLPESEAF+LG+G
Sbjct: 1   MEKPSSSSFVISFSIVAILTLASFASCLAAEFNRTKKEDLKLNGKFCFLPESEAFKLGIG 60

Query: 61  GLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLLISW 105
           GLVCLIMAQIIG+T IYHSYWPKEHRKSCSVK PLLSI LLISW
Sbjct: 61  GLVCLIMAQIIGSTLIYHSYWPKEHRKSCSVKKPLLSIALLISW 104

BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|778692678|ref|XP_004150759.2| (PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41
Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 1

Query: 1   MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVG 60
           ME P  S FVISFS+VA+LTLASFASC+AAEFNRTKK+DLKLN + CFLPESEAF+LG+G
Sbjct: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115

Query: 61  GLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLLISW 105
           GL+CLIMAQIIG T I HSYWPKEHRKSCSVK PLLSI LLISW
Sbjct: 116 GLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISW 159

BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|225427623|ref|XP_002269579.1| (PREDICTED: uncharacterized protein LOC100266552 isoform X1 [Vitis vinifera])

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-17
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1

Query: 1   MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVG 60
           MEK  F+  +I  SI+A L L +F  C+AAEF R+KKKD+KLNG+ C+L ES AFQLGV 
Sbjct: 1   MEKHRFASLLIP-SIIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVA 60

Query: 61  GLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLL-ISW 105
            L+CL +A I+GN  I       E   S   KTP ++ TLL +SW
Sbjct: 61  ALICLFIAHILGNMVICRRICSGEKSSSGKAKTPWITSTLLVVSW 104

BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|731382294|ref|XP_010644493.1| (PREDICTED: uncharacterized protein LOC100266552 isoform X2 [Vitis vinifera])

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-17
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1

Query: 1   MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVG 60
           MEK  F+  +I  SI+A L L +F  C+AAEF R+KKKD+KLNG+ C+L ES AFQLGV 
Sbjct: 1   MEKHRFASLLIP-SIIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVA 60

Query: 61  GLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLL-ISW 105
            L+CL +A I+GN  I       E   S   KTP ++ TLL +SW
Sbjct: 61  ALICLFIAHILGNMVICRRICSGEKSSSGKAKTPWITSTLLVVSW 104

BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|661889251|emb|CDP07220.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 96.3 bits (238), Expect = 3.6e-17
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1

Query: 10  VISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVGGLVCLIMAQ 69
           ++  S++ +L L SF+ C AAEF R+KK+DL+ NG+ C+L  SE F LGV  LV L +AQ
Sbjct: 11  ILLLSLIIILGLISFSLCFAAEFKRSKKEDLRFNGKLCYLAGSEGFDLGVAALVFLFIAQ 70

Query: 70  IIGNTTIYHSYWPKEHRKSCSVKTP-LLSITLLISW 105
           IIGN  +   +W + H + C  K P ++ I+L++SW
Sbjct: 71  IIGNLLVCCKFWSRSHERGCKTKQPKIVIISLVLSW 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L099_CUCSA8.6e-4281.73Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1[more]
D7TFD2_VITVI8.7e-1850.48Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00640 PE=4 SV=... [more]
A0A068UFA9_COFCA2.5e-1744.79Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1[more]
A0A061G695_THECC2.1e-1652.58Uncharacterized protein OS=Theobroma cacao GN=TCM_016706 PE=4 SV=1[more]
A0A0A0KYL9_CUCSA3.6e-1646.53Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G19370.15.7e-1338.54 Protein of unknown function (DUF1218)[more]
AT1G31720.11.4e-1136.27 Protein of unknown function (DUF1218)[more]
Match NameE-valueIdentityDescription
gi|659087031|ref|XP_008444240.1|2.4e-4587.50PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo][more]
gi|778692678|ref|XP_004150759.2|1.2e-4181.73PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus][more]
gi|225427623|ref|XP_002269579.1|1.2e-1750.48PREDICTED: uncharacterized protein LOC100266552 isoform X1 [Vitis vinifera][more]
gi|731382294|ref|XP_010644493.1|1.2e-1750.48PREDICTED: uncharacterized protein LOC100266552 isoform X2 [Vitis vinifera][more]
gi|661889251|emb|CDP07220.1|3.6e-1744.79unnamed protein product [Coffea canephora][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G016120.1ClCG11G016120.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 1..105
score: 5.9
NoneNo IPR availablePANTHERPTHR31769:SF6SUBFAMILY NOT NAMEDcoord: 1..105
score: 5.9
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: