ClCG11G016120 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAATGTTTTTTATTATTATCATTATTAAGAAAAATTGTAAATTCAGTCTTCAATCTGTCTGTCTGTCTCTAGGTATTTGACTAGTGATGAAGATGAAGTCTCAAGTTTTACAAGTCAAGAGAGAAAATGATGAAATTTCCACCACTAACCTCCAAGAGTCGTTCCTTTTTTCCAATACCATGATTTAAACTCCCACTTCTTCCTTCGATCTTCTTCAGCACGTCATGGAAAAGCCCCCTTTTTCTAGGTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTTACCCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAGTGAGCTTCTTTTTCACTTTCTTTATCTTTCCTATTTTTCAATATTGATTTTTGCATACATATTGAAATTTCCTGGATGATCCACAAAATCGGAAATTTGTTGTAGAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCCAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACACCACAATCTACCATAGCTATTGGCCAAAAGAGCATAGAAAAAGTTGCAGTGTTAAAACGCCTCTGCTTTCAATAACCCTTCTCATCTCTTGGTCGGTAATTCCTTCTCCATACTAATCTTCTTTTCTTCTTATTTTTCACTTTATAATAAAAAAAATTATTAAAAGAAATATATATAAAAATATGAGTTATTTTCAAATATAGACGGTGTGATAAATAGTGAAATTTTTCTATGTTTGTTAATAGTTTGATAGTTTTTATTTTTATAATAATTTTTCTAAAAAGGCATGATCTCCTTCTTCCGTGAAGCTTCCATCTCTCATCCATATAGTTGTCATATTGAAAAATAAAATAAATATATTTGAGAGGGCCAAACAAAGCTGTAATCTTAAAGTAGAAAACTGAAGTTTTATGCTAGTTGAACGTATTTTTAGTTGGATATATATATTTTAGTCAACCTCGAGATTGTGTTTATTTTGTCTACTTTTGAAAACTGTCTAATAGCATTGTTAGATAGAAGTTTGAATTTTATGTTGAATAGGTTTGAATTTTCAATAGTTT CTAAAATGTTTTTTATTATTATCATTATTAAGAAAAATTGTAAATTCAGTCTTCAATCTGTCTGTCTGTCTCTAGGTATTTGACTAGTGATGAAGATGAAGTCTCAAGTTTTACAAGTCAAGAGAGAAAATGATGAAATTTCCACCACTAACCTCCAAGAGTCGTTCCTTTTTTCCAATACCATGATTTAAACTCCCACTTCTTCCTTCGATCTTCTTCAGCACGTCATGGAAAAGCCCCCTTTTTCTAGGTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTTACCCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCCAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACACCACAATCTACCATAGCTATTGGCCAAAAGAGCATAGAAAAAGTTGCAGTGTTAAAACGCCTCTGCTTTCAATAACCCTTCTCATCTCTTGGTCGGTAATTCCTTCTCCATACTAATCTTCTTTTCTTCTTATTTTTCACTTTATAATAAAAAAAATTATTAAAAGAAATATATATAAAAATATGAGTTATTTTCAAATATAGACGGTGTGATAAATAGTGAAATTTTTCTATGTTTGTTAATAGTTTGATAGTTTTTATTTTTATAATAATTTTTCTAAAAAGGCATGATCTCCTTCTTCCGTGAAGCTTCCATCTCTCATCCATATAGTTGTCATATTGAAAAATAAAATAAATATATTTGAGAGGGCCAAACAAAGCTGTAATCTTAAAGTAGAAAACTGAAGTTTTATGCTAGTTGAACGTATTTTTAGTTGGATATATATATTTTAGTCAACCTCGAGATTGTGTTTATTTTGTCTACTTTTGAAAACTGTCTAATAGCATTGTTAGATAGAAGTTTGAATTTTATGTTGAATAGGTTTGAATTTTCAATAGTTT ATGGAAAAGCCCCCTTTTTCTAGGTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTTACCCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCCAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACACCACAATCTACCATAGCTATTGGCCAAAAGAGCATAGAAAAAGTTGCAGTGTTAAAACGCCTCTGCTTTCAATAACCCTTCTCATCTCTTGGTCGGTAATTCCTTCTCCATACTAA MEKPPFSRFVISFSIVAVLTLASFASCIAAEFNRTKKKDLKLNGRFCFLPESEAFQLGVGGLVCLIMAQIIGNTTIYHSYWPKEHRKSCSVKTPLLSITLLISWSVIPSPY
BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A0A0L099_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 8.6e-42 Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 1
BLAST of ClCG11G016120 vs. TrEMBL
Match: D7TFD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00640 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 8.7e-18 Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A068UFA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.5e-17 Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1
BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A061G695_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016706 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-16 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1
BLAST of ClCG11G016120 vs. TrEMBL
Match: A0A0A0KYL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.6e-16 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1
BLAST of ClCG11G016120 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218)) HSP 1 Score: 70.9 bits (172), Expect = 5.7e-13 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of ClCG11G016120 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218)) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11 Identity = 37/102 (36.27%), Postives = 52/102 (50.98%), Query Frame = 1
BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|659087031|ref|XP_008444240.1| (PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo]) HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45 Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 1
BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|778692678|ref|XP_004150759.2| (PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41 Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 1
BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|225427623|ref|XP_002269579.1| (PREDICTED: uncharacterized protein LOC100266552 isoform X1 [Vitis vinifera]) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-17 Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|731382294|ref|XP_010644493.1| (PREDICTED: uncharacterized protein LOC100266552 isoform X2 [Vitis vinifera]) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-17 Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of ClCG11G016120 vs. NCBI nr
Match: gi|661889251|emb|CDP07220.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 96.3 bits (238), Expect = 3.6e-17 Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |