ClCG11G014150 (gene) Watermelon (Charleston Gray)

NameClCG11G014150
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr11 : 27404071 .. 27404406 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCTCAATGGATCGAGCGACTTTGCGACCTCTCGGGAAGCCGAGTTCGCGATAGAGCTTGCCGGCATCGTCGAGGCGAAGAACGTGCTCCGGCTGCTTGGAGAGGAAATCCTTGGACTTAAAAAGGAATCTGAAGAAGGAATCGGTTTGGAGGATGCGCTCGAAGTGAGAAATGCGATTGGATTCGGATTGGACGAGCTTGGTTCTAGGACTTTCGTGCTTCTTGCGTTTCTTCCTGAACTTCTTGGGGAGTTTGGTGACAAGGAAGGAGGTGGAAAATGGGAGTTTGGGGATGAAGAAGTAAGGAGAGGAATGGCGAAGGATGTTTGTTAG

mRNA sequence

ATGACGCTCAATGGATCGAGCGACTTTGCGACCTCTCGGGAAGCCGAGTTCGCGATAGAGCTTGCCGGCATCGTCGAGGCGAAGAACGTGCTCCGGCTGCTTGGAGAGGAAATCCTTGGACTTAAAAAGGAATCTGAAGAAGGAATCGGTTTGGAGGATGCGCTCGAAGTGAGAAATGCGATTGGATTCGGATTGGACGAGCTTGGTTCTAGGACTTTCGTGCTTCTTGCGTTTCTTCCTGAACTTCTTGGGGAGTTTGGTGACAAGGAAGGAGGTGGAAAATGGGAGTTTGGGGATGAAGAAGTAAGGAGAGGAATGGCGAAGGATGTTTGTTAG

Coding sequence (CDS)

ATGACGCTCAATGGATCGAGCGACTTTGCGACCTCTCGGGAAGCCGAGTTCGCGATAGAGCTTGCCGGCATCGTCGAGGCGAAGAACGTGCTCCGGCTGCTTGGAGAGGAAATCCTTGGACTTAAAAAGGAATCTGAAGAAGGAATCGGTTTGGAGGATGCGCTCGAAGTGAGAAATGCGATTGGATTCGGATTGGACGAGCTTGGTTCTAGGACTTTCGTGCTTCTTGCGTTTCTTCCTGAACTTCTTGGGGAGTTTGGTGACAAGGAAGGAGGTGGAAAATGGGAGTTTGGGGATGAAGAAGTAAGGAGAGGAATGGCGAAGGATGTTTGTTAG

Protein sequence

MTLNGSSDFATSREAEFAIELAGIVEAKNVLRLLGEEILGLKKESEEGIGLEDALEVRNAIGFGLDELGSRTFVLLAFLPELLGEFGDKEGGGKWEFGDEEVRRGMAKDVC
BLAST of ClCG11G014150 vs. TrEMBL
Match: A0A0A0LHJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889730 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 7.8e-35
Identity = 81/111 (72.97%), Postives = 89/111 (80.18%), Query Frame = 1

Query: 1   MTLNGSSDFATSREAEFAIELAGIVEAKNVLRLLGEEILGLKKESEEGIGLEDALEVRNA 60
           M  N SSDFATS +A+FAIELAGI+E KN+LRLLGE+ILG KKESE+GI LEDALEVRNA
Sbjct: 133 MAFNRSSDFATSWKAKFAIELAGIIETKNMLRLLGEKILGFKKESEDGISLEDALEVRNA 192

Query: 61  IGFGLDELGSRTFVLLAFLPELLGEFGDKEGGGKWEFGDEEVRRGMAKDVC 112
           I FGLDELGSR  V LAFLPE LGEFGD+EGGG W        R MAK+VC
Sbjct: 193 IRFGLDELGSRAIVFLAFLPEFLGEFGDEEGGGVW--------RRMAKEVC 235

BLAST of ClCG11G014150 vs. NCBI nr
Match: gi|700205084|gb|KGN60217.1| (hypothetical protein Csa_3G889730 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 81/111 (72.97%), Postives = 89/111 (80.18%), Query Frame = 1

Query: 1   MTLNGSSDFATSREAEFAIELAGIVEAKNVLRLLGEEILGLKKESEEGIGLEDALEVRNA 60
           M  N SSDFATS +A+FAIELAGI+E KN+LRLLGE+ILG KKESE+GI LEDALEVRNA
Sbjct: 133 MAFNRSSDFATSWKAKFAIELAGIIETKNMLRLLGEKILGFKKESEDGISLEDALEVRNA 192

Query: 61  IGFGLDELGSRTFVLLAFLPELLGEFGDKEGGGKWEFGDEEVRRGMAKDVC 112
           I FGLDELGSR  V LAFLPE LGEFGD+EGGG W        R MAK+VC
Sbjct: 193 IRFGLDELGSRAIVFLAFLPEFLGEFGDEEGGGVW--------RRMAKEVC 235

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LHJ5_CUCSA7.8e-3572.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889730 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700205084|gb|KGN60217.1|1.1e-3472.97hypothetical protein Csa_3G889730 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G014150.1ClCG11G014150.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG11G014150Csa3G889730Cucumber (Chinese Long) v2cuwcgB199
ClCG11G014150CmaCh09G005600Cucurbita maxima (Rimu)cmawcgB014
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG11G014150Cucumber (Chinese Long) v3cucwcgB114
ClCG11G014150Cucumber (Chinese Long) v3cucwcgB202
ClCG11G014150Cucumber (Chinese Long) v3cucwcgB453
ClCG11G014150Watermelon (97103) v2wcgwmbB060
ClCG11G014150Watermelon (97103) v2wcgwmbB064
ClCG11G014150Watermelon (97103) v2wcgwmbB084
ClCG11G014150Wax gourdwcgwgoB160
ClCG11G014150Wax gourdwcgwgoB179
ClCG11G014150Watermelon (Charleston Gray)wcgwcgB061
ClCG11G014150Watermelon (Charleston Gray)wcgwcgB079
ClCG11G014150Cucumber (Gy14) v1cgywcgB133
ClCG11G014150Cucumber (Gy14) v1cgywcgB274
ClCG11G014150Cucumber (Gy14) v1cgywcgB536
ClCG11G014150Cucurbita maxima (Rimu)cmawcgB388
ClCG11G014150Cucurbita maxima (Rimu)cmawcgB687
ClCG11G014150Cucurbita moschata (Rifu)cmowcgB007
ClCG11G014150Cucurbita moschata (Rifu)cmowcgB386
ClCG11G014150Cucurbita moschata (Rifu)cmowcgB691
ClCG11G014150Wild cucumber (PI 183967)cpiwcgB104
ClCG11G014150Wild cucumber (PI 183967)cpiwcgB201
ClCG11G014150Wild cucumber (PI 183967)cpiwcgB451
ClCG11G014150Cucumber (Chinese Long) v2cuwcgB099
ClCG11G014150Melon (DHL92) v3.5.1mewcgB274
ClCG11G014150Melon (DHL92) v3.5.1mewcgB322
ClCG11G014150Watermelon (97103) v1wcgwmB086
ClCG11G014150Watermelon (97103) v1wcgwmB103
ClCG11G014150Cucurbita pepo (Zucchini)cpewcgB093
ClCG11G014150Cucurbita pepo (Zucchini)cpewcgB490
ClCG11G014150Cucurbita pepo (Zucchini)cpewcgB693
ClCG11G014150Bottle gourd (USVL1VR-Ls)lsiwcgB122
ClCG11G014150Bottle gourd (USVL1VR-Ls)lsiwcgB260
ClCG11G014150Bottle gourd (USVL1VR-Ls)lsiwcgB420
ClCG11G014150Cucumber (Gy14) v2cgybwcgB096
ClCG11G014150Cucumber (Gy14) v2cgybwcgB183
ClCG11G014150Cucumber (Gy14) v2cgybwcgB398
ClCG11G014150Melon (DHL92) v3.6.1medwcgB265
ClCG11G014150Melon (DHL92) v3.6.1medwcgB316
ClCG11G014150Melon (DHL92) v3.6.1medwcgB508
ClCG11G014150Silver-seed gourdcarwcgB0059
ClCG11G014150Silver-seed gourdcarwcgB0610
ClCG11G014150Silver-seed gourdcarwcgB0983