ClCG11G013530 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGTTTCCCATCTCTATTTAAATTCCCCTTTCTTCACTTCCTCAATCTCCATTCCTTTTCTCTTCTTCCATGGATTCCAAGGAATTCGACCTCTCTTCTTCCCCCTTCTCCGATAGGTAAATCAATTTCATGATTACCCTCCATTATCGCTGATCTCAGATTATTCATCTTCTTTTTTAATTATTCACTTATTTAATTTCTTTTGCGCCGTCGTTTTCGTGCAGATGGTGGTCCAAGAACACGGTGGCGATCGTCACCGGAGCAAACAAGGGCATCGGATTTGCCCTAGTTAGAAAATTAGCGCAATCGGAACTCACTGTGATATTAACTGCTAGAGATGAAGCAAGAGGATTGCAGGCCGTTCAAACTCTACGAAATGAAGGACTTCATGTTCTCTTCCACCGTCTCGATGTTTCCGATCCTGTCTCCATTAACGCCTTCGCCGCCTGGTTCGCTACCAATTTTCAAGCCCTAGACATTCTTGTGAGTATTTATTATTATTTTTATTTTTTTAAAAAAAAATTTAATTTGTGTGCATCATTCATTTTCACTCTCACTCACGCCTTCTGTTTCTTACGGAACACAACTACTTTTTTTTTTTTTTTTCCTGAATTTACAATTTCATCCCTCAACTTACATGAAATTAGAATTCTTCTCTCACGTCACGTCTTGCCTTATATTAACACTTTCACCCGATAATGCACCCTTTTCTGTTGTCTCATTGTGTCCAAATCTGCTTTTAAAAATGTCCAGATTTTAATTTTTACGAAAATGTTACGGTAGTGATTTTTAAACAAATTTATTTAAATTAGTAAATAATGTTTTATCATTCTCAAACAAGTTAATGTGTTTAAATTTAAGTTAAAATATTGTTTTGGACTTAATATTTTTAAATTGGTTCAATTTTAATTTAGGCTATTTTCAAATATAGCAAAAGAAATCAAAATATTTATAAATATAGCAAAATTTTACTGTTTATTTGCGATAGACTACTATCGGTGTCATAACACAGATAGTAGTCTATCGCAAATAGACTATATATTTTGCTATTAGTTGTAAATATTTTCAACAACTTTGTTGAAAATATTTTTAGTTTCTATATTTTTAATTGTCCAATTTTAGTTTGTAGACTTTTAATAAAAAAAAAACTTTTTATTGATATTAACATTTTCACTATAAATTTTAAAATAATGTTCACATATTTTTTTTTATATAAAAATTATTATTATTATTTAATCAATTAGAAATTAACATTTTGAGTGACTAAAATTAAGATTTACTAAGAGTACAGTGACTAAAATTAGACCATTAAAAGTACTTGGATTAAAATTTAACAAATTTTAAAATATATAGACTAAAATAGTAGTTTAACCTTAGATTTATTATTATATTTATATTAGTGATATTTTATTATATATTATGTTTTGTAACGTGTATTTAGCATAAATGGTACGTGGACTGTTTGACTTAAAAGATCCAAATATGACTTCATTTAGTGATGTATGTGACATTAAATTTTGTAGCATGTATTTAACATAAACGGTAAATGATGGCATTGAAATGAGTAATGGACCGTGTGATTTAAGATGGATAAAATTCAAGATAGTTTTAAATTATAGTCAAAATGAAATAAATGATATAGGATAGATATAAAATAGGATTTGAACTGTTTTTTCGACGCAAATTACCTACTCCAATGCTTGGGATATTAGCAAGTTTTCCATTGGGTTGATAGATCCAGTCCTCTCATATCCTTTCTTTGAAATGTATATCCAAAACAAATTAATTTACAAATTTAGCCATAAATTTGCAAAATTGTGTTTAAATGTTTCTAACATTTTATTTTAGCTGTCTTATAAGTCTCAGGATTATTTTACAATTTTTAAAACTCATAGATGTTTTGGAAGTCAATTTTATGTGTAATAAGTTCTTGGATTTCTTTTTTTTATTGTCTAATTGATTAAGGATCTACAAAATTAGAAGTTATGAGATTTATTGCACTTTTAAATACTAGAAAGAGATTCAATACAGAATTGAAAAATTAGAATCATTTAGTAACACTTTCGTTTTTAACTTTTTGTTTATCAAAGTTATTGCTATTTCTTCCAAAATTCCTTACTGTAGTTTGTCTTTTTTTTTTTAAGAAGCATTTACTTTTTTTTTAGTCATATTTCAAGAACAAAAATTACTTTTCGAAAAAATGGACAGAAAGTTAATAACAAATAACTAACCACCTAACTCTAAAATGATTCAACTTGTAATTTATTATGGGAGACAGGATCACATGTTATGACATATATATTTTAATGGTTTAGTTCTCCCAAGATTTGAAAAAGTAGTAAACAAAGTCAAATAATTATTGAGAAACGAAACGATCTCACGTTTCAGAGTAAAAAAACAAAAAAAAGGAAAATTTACGTTTCAGAGTAAAAAAACAAAAAAAGGAAAATTTATGTTGTCATGTGTGGGACTTCAACATAGCTTGTGTAATTATTTCAACTATATTAGTATGCTAAGGAATTTCTTCCGTTTAGTTTCAATTCAATGTCGTTGGATGCTTGTGGTAATACTCAATTCAACTGTACTATTCAACTGTATTAGTAAGCTAAGGATTCTTTTCTTTTTTTTTTTTTAATAAAGAGTTGAGGTCATAGATTCAATATATGGTAACCACACCTACCTAGAATTTAATATTTTACGGGTTTCCTTATACCAAAATGACAACCAATCACACCTACCTAGGGTTTAATATTTTACGGGTTTCTTTATACCAAAATGTTAAGTTGGTTGTCTTGTGAAATTAATCAAAGTGCACATAAGCCGATTCGAATATTCCTAAAGAAAAAGAAAATAGGGGAGAGGGGGGACATTATATTGTGATAGAAAGTCAACAAAGATGATATGTTGTGAAAGAAAAAAAAAAAGGAAAGAAAGAAAGCAAGTGGTTGGATGTTCCCAATCAATTTGTTCGTTTTATGAGTCTGTTTTTTCCTGTATTTCCACTTGAAGTGGGCACAGTCCAGTCTTCATAACGACCAAAAAAAAAAAAAAAAAGCACTTTTACCATTAGCTCCCACGCCGCCCCCCCCTCACGAGGACAATATCTTAAACACACACTACAATAATATAATATTCCACTAATAATAATAATAATAATATTCTCGTTAACAAAGAACTTGCCAGGTAATGAACTGTTTGTTTGAAAAATTGAATTGAGTTGTAGCGTAGCATGTAGCTAAGGTTGTGTGTTGTGTGGTATAGTTTATATTATATGATTGAGGTTTAGTTTTTGATTTACTTATGCAGGTTAACAATGCAGCGGTGTCATTCAACGACATATACCAGAACTCGGTGGAAAACGCAGAAACAGTAATGAAAACAAACTTTTACGGTGCGAAATTACTAACCGAAGCTCTATTGCCTTACTTTCGCTCTTCTGCTTCCAAAAGTCGAATTCTGAATATCACCTCAAGGCTGGGAACCGTGGATGTAAAATTCAAAACAACTCCTGCCTTTTATTTTGTTTTACATTGAGACGACAATTATAATTATAATATAATGTAGACATTGATCATGGATGTAAAAACGAATGCAGAAAGTAAGGAACATGAAGGTGAAAAAGATTCTAGAGAGTGAAGATGTGGGGGAGGAAGACATCGAGGGCGTAGTGAAAGCATTTTTGGAGGACGTGAAGAGAGGGACATGGAAGAAGGCAGGTTGGCCGGCGCTATGGACGGATTATGCTGTGTCCAAGTTGGCGCTGAATGCTTACACCAGAGTTTTGGCTAAGCGATATGGTGAGTTTGGGAGTGTGAGTGTGAATAGCTTTTGCCCTGGCTTCACACAAACCTCAATGACACGTGGAAAAGGAACACACACCGCCGCCGACGCCGCCCTCGTCGGAGCTAGACTCGCCATGTTGCCGCCTCACCGTTTACCAACTGGCCAGTTCTTCTTCTGGGGGCCTAACTATGATATACCTAGAAACTCAAAATTATAGCTAAACCCCCTCTCCATACATTCCCAACTCCCTTTCTATCCTTTTTCTTTTTTAGGCTAAATGGTAAAATATACCCTTCTAACTTTGTACTTTCTTTCAATTTACTCCAACAGTTTTAAAAATTTCAAAATTACTCTTGAAGTTGAAATCCTTTATAATTTCAAATGAAAATAGAACTTAAAACGTTGTGATGGCTAGTGAAAA CTCGTTTCCCATCTCTATTTAAATTCCCCTTTCTTCACTTCCTCAATCTCCATTCCTTTTCTCTTCTTCCATGGATTCCAAGGAATTCGACCTCTCTTCTTCCCCCTTCTCCGATAGATGGTGGTCCAAGAACACGGTGGCGATCGTCACCGGAGCAAACAAGGGCATCGGATTTGCCCTAGTTAGAAAATTAGCGCAATCGGAACTCACTGTGATATTAACTGCTAGAGATGAAGCAAGAGGATTGCAGGCCGTTCAAACTCTACGAAATGAAGGACTTCATGTTCTCTTCCACCGTCTCGATGTTTCCGATCCTGTCTCCATTAACGCCTTCGCCGCCTGGTTCGCTACCAATTTTCAAGCCCTAGACATTCTTGTTAACAATGCAGCGGTGTCATTCAACGACATATACCAGAACTCGGTGGAAAACGCAGAAACAGTAATGAAAACAAACTTTTACGGTGCGAAATTACTAACCGAAGCTCTATTGCCTTACTTTCGCTCTTCTGCTTCCAAAAGTCGAATTCTGAATATCACCTCAAGGCTGGGAACCGTGGATGTAAAATTCAAAACAACTCCTGCCTTTTATTTTGTTTTACATTGAGACGACAATTATAATTATAATATAATGTAGACATTGATCATGGATGTAAAAACGAATGCAGAAAGTAAGGAACATGAAGGTGAAAAAGATTCTAGAGAGTGAAGATGTGGGGGAGGAAGACATCGAGGGCGTAGTGAAAGCATTTTTGGAGGACGTGAAGAGAGGGACATGGAAGAAGGCAGGTTGGCCGGCGCTATGGACGGATTATGCTGTGTCCAAGTTGGCGCTGAATGCTTACACCAGAGTTTTGGCTAAGCGATATGGTGAGTTTGGGAGTGTGAGTGTGAATAGCTTTTGCCCTGGCTTCACACAAACCTCAATGACACGTGGAAAAGGAACACACACCGCCGCCGACGCCGCCCTCGTCGGAGCTAGACTCGCCATGTTGCCGCCTCACCGTTTACCAACTGGCCAGTTCTTCTTCTGGGGGCCTAACTATGATATACCTAGAAACTCAAAATTATAGCTAAACCCCCTCTCCATACATTCCCAACTCCCTTTCTATCCTTTTTCTTTTTTAGGCTAAATGGTAAAATATACCCTTCTAACTTTGTACTTTCTTTCAATTTACTCCAACAGTTTTAAAAATTTCAAAATTACTCTTGAAGTTGAAATCCTTTATAATTTCAAATGAAAATAGAACTTAAAACGTTGTGATGGCTAGTGAAAA ATGGATTCCAAGGAATTCGACCTCTCTTCTTCCCCCTTCTCCGATAGATGGTGGTCCAAGAACACGGTGGCGATCGTCACCGGAGCAAACAAGGGCATCGGATTTGCCCTAGTTAGAAAATTAGCGCAATCGGAACTCACTGTGATATTAACTGCTAGAGATGAAGCAAGAGGATTGCAGGCCGTTCAAACTCTACGAAATGAAGGACTTCATGTTCTCTTCCACCGTCTCGATGTTTCCGATCCTGTCTCCATTAACGCCTTCGCCGCCTGGTTCGCTACCAATTTTCAAGCCCTAGACATTCTTGTTAACAATGCAGCGGTGTCATTCAACGACATATACCAGAACTCGGTGGAAAACGCAGAAACAGTAATGAAAACAAACTTTTACGGTGCGAAATTACTAACCGAAGCTCTATTGCCTTACTTTCGCTCTTCTGCTTCCAAAAGTCGAATTCTGAATATCACCTCAAGGCTGGGAACCGTGGATGTAAAATTCAAAACAACTCCTGCCTTTTATTTTGTTTTACATTGA MDSKEFDLSSSPFSDRWWSKNTVAIVTGANKGIGFALVRKLAQSELTVILTARDEARGLQAVQTLRNEGLHVLFHRLDVSDPVSINAFAAWFATNFQALDILVNNAAVSFNDIYQNSVENAETVMKTNFYGAKLLTEALLPYFRSSASKSRILNITSRLGTVDVKFKTTPAFYFVLH
BLAST of ClCG11G013530 vs. Swiss-Prot
Match: SDR2B_ARATH (Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24 Identity = 67/162 (41.36%), Postives = 94/162 (58.02%), Query Frame = 1
BLAST of ClCG11G013530 vs. Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24 Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = 1
BLAST of ClCG11G013530 vs. Swiss-Prot
Match: CBR1_BOVIN (Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.9e-24 Identity = 66/149 (44.30%), Postives = 87/149 (58.39%), Query Frame = 1
BLAST of ClCG11G013530 vs. Swiss-Prot
Match: CBR1_RAT (Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23 Identity = 62/141 (43.97%), Postives = 88/141 (62.41%), Query Frame = 1
BLAST of ClCG11G013530 vs. Swiss-Prot
Match: CBR1_MOUSE (Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-22 Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1
BLAST of ClCG11G013530 vs. TrEMBL
Match: A0A0A0KRZ1_CUCSA (Carbonyl reductase OS=Cucumis sativus GN=Csa_5G589270 PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.3e-71 Identity = 144/164 (87.80%), Postives = 153/164 (93.29%), Query Frame = 1
BLAST of ClCG11G013530 vs. TrEMBL
Match: V4TPQ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021349mg PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.5e-53 Identity = 109/150 (72.67%), Postives = 128/150 (85.33%), Query Frame = 1
BLAST of ClCG11G013530 vs. TrEMBL
Match: A0A067DGI7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022103mg PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 5.9e-53 Identity = 110/154 (71.43%), Postives = 130/154 (84.42%), Query Frame = 1
BLAST of ClCG11G013530 vs. TrEMBL
Match: V4TZQ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021349mg PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 5.9e-53 Identity = 110/154 (71.43%), Postives = 130/154 (84.42%), Query Frame = 1
BLAST of ClCG11G013530 vs. TrEMBL
Match: U5FT87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13140g PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 3.9e-52 Identity = 108/164 (65.85%), Postives = 133/164 (81.10%), Query Frame = 1
BLAST of ClCG11G013530 vs. TAIR10
Match: AT3G59710.1 (AT3G59710.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 179.5 bits (454), Expect = 1.8e-45 Identity = 92/148 (62.16%), Postives = 113/148 (76.35%), Query Frame = 1
BLAST of ClCG11G013530 vs. TAIR10
Match: AT5G61830.1 (AT5G61830.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 156.0 bits (393), Expect = 2.2e-38 Identity = 82/160 (51.25%), Postives = 110/160 (68.75%), Query Frame = 1
BLAST of ClCG11G013530 vs. TAIR10
Match: AT5G51030.1 (AT5G51030.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 151.4 bits (381), Expect = 5.3e-37 Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 1
BLAST of ClCG11G013530 vs. TAIR10
Match: AT1G01800.1 (AT1G01800.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 114.4 bits (285), Expect = 7.2e-26 Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1
BLAST of ClCG11G013530 vs. TAIR10
Match: AT3G61220.2 (AT3G61220.2 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 114.0 bits (284), Expect = 9.4e-26 Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = 1
BLAST of ClCG11G013530 vs. NCBI nr
Match: gi|659090446|ref|XP_008446020.1| (PREDICTED: (+)-neomenthol dehydrogenase [Cucumis melo]) HSP 1 Score: 280.0 bits (715), Expect = 2.8e-72 Identity = 146/164 (89.02%), Postives = 153/164 (93.29%), Query Frame = 1
BLAST of ClCG11G013530 vs. NCBI nr
Match: gi|449435095|ref|XP_004135331.1| (PREDICTED: (+)-neomenthol dehydrogenase [Cucumis sativus]) HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71 Identity = 144/164 (87.80%), Postives = 153/164 (93.29%), Query Frame = 1
BLAST of ClCG11G013530 vs. NCBI nr
Match: gi|568879694|ref|XP_006492782.1| (PREDICTED: (+)-neomenthol dehydrogenase [Citrus sinensis]) HSP 1 Score: 216.5 bits (550), Expect = 3.8e-53 Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 1
BLAST of ClCG11G013530 vs. NCBI nr
Match: gi|567899348|ref|XP_006442162.1| (hypothetical protein CICLE_v10021349mg [Citrus clementina]) HSP 1 Score: 215.7 bits (548), Expect = 6.5e-53 Identity = 109/150 (72.67%), Postives = 128/150 (85.33%), Query Frame = 1
BLAST of ClCG11G013530 vs. NCBI nr
Match: gi|641820807|gb|KDO40655.1| (hypothetical protein CISIN_1g022103mg [Citrus sinensis]) HSP 1 Score: 215.3 bits (547), Expect = 8.5e-53 Identity = 110/154 (71.43%), Postives = 130/154 (84.42%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |