ClCG11G012890 (gene) Watermelon (Charleston Gray)

Overview
NameClCG11G012890
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionMitochondrial transcription termination factor family protein
LocationCG_Chr11 : 26183461 .. 26184546 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAATTTCTTCCACATTTCTTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGCGTCTGTCTCTACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAAGCTCCTAACTGATGAAAAAAACCCCCAAAAGTACGAAGCCATTATCAGTTTCTTCAAATCGTATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTTTCGTTGCGACCTGCTATCCTTCATTCGAGAGTATCCAAGAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATGGAACCCTACGATTCTGTCCAGGAGCTTAAATTATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGAAAGAGAATGTAATAGCTGCTATTCGTCGTGCTTCATGGCTTCTAACTTTTGATTTTAAGGGTATTATGCAACCAAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGAATATAACGAAATTGATTGTACTGCAGCCTAGAACTATTATGCGAAAGGTTGATAGAATGGTTTATGCAGTGAAAGCAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATTGTCTGAGAAAGAGATTTTAACAGCATTTAAGAGAGAACCACATTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCAGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTTATTAAGAAGAATAAAAAGATTGCTCAGTTGTTTATGCTAGAGGAGCGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

mRNA sequence

ATGTCTAAAATTTCTTCCACATTTCTTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGCGTCTGTCTCTACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAAGCTCCTAACTGATGAAAAAAACCCCCAAAAGTACGAAGCCATTATCAGTTTCTTCAAATCGTATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTTTCGTTGCGACCTGCTATCCTTCATTCGAGAGTATCCAAGAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATGGAACCCTACGATTCTGTCCAGGAGCTTAAATTATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGAAAGAGAATGTAATAGCTGCTATTCGTCGTGCTTCATGGCTTCTAACTTTTGATTTTAAGGGTATTATGCAACCAAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGAATATAACGAAATTGATTGTACTGCAGCCTAGAACTATTATGCGAAAGGTTGATAGAATGGTTTATGCAGTGAAAGCAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATTGTCTGAGAAAGAGATTTTAACAGCATTTAAGAGAGAACCACATTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCAGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTTATTAAGAAGAATAAAAAGATTGCTCAGTTGTTTATGCTAGAGGAGCGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

Coding sequence (CDS)

ATGTCTAAAATTTCTTCCACATTTCTTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGCGTCTGTCTCTACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAAGCTCCTAACTGATGAAAAAAACCCCCAAAAGTACGAAGCCATTATCAGTTTCTTCAAATCGTATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTTTCGTTGCGACCTGCTATCCTTCATTCGAGAGTATCCAAGAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATGGAACCCTACGATTCTGTCCAGGAGCTTAAATTATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGAAAGAGAATGTAATAGCTGCTATTCGTCGTGCTTCATGGCTTCTAACTTTTGATTTTAAGGGTATTATGCAACCAAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGAATATAACGAAATTGATTGTACTGCAGCCTAGAACTATTATGCGAAAGGTTGATAGAATGGTTTATGCAGTGAAAGCAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATTGTCTGAGAAAGAGATTTTAACAGCATTTAAGAGAGAACCACATTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCAGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTTATTAAGAAGAATAAAAAGATTGCTCAGTTGTTTATGCTAGAGGAGCGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

Protein sequence

MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLACRKLLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGNAAA
Homology
[Close]
BLAST of ClCG11G012890 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-08
Identity = 61/279 (21.86%), Postives = 118/279 (42.29%), Query Frame = 1 

Query: 69  GFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNY 128
           G    QI  +     A  +  +   +KP  EFL ++GI    +P ++   P I   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 129 QLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIV 188
            LKP+  F++ +   K      I R   +LT+  + +    ++ L   G+    I +++ 
Sbjct: 267 NLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTS-TVEFLSQTGLTEEQIGRILT 326

Query: 189 LQPRTIMRKV-DRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVL---KS 248
             P  +   V D++   ++  + L  +    + +H       ++  +  K +      K 
Sbjct: 327 RCPNIMSYSVEDKLRPTMEYFRSLNVD--VAVLLHRCPQTFGLSIESNLKPVTEFFLEKG 386

Query: 249 FGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLW 308
           FGL E  I+ +     +  +  E  M    D+ F T       L+ +P+FF Y L +R+ 
Sbjct: 387 FGLDEIGIMISRYGALYTFSLKENVMPKW-DY-FQTMDYPKSELVKFPQFFGYSLQERIK 446

Query: 309 PRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLK 344
           PRY++++   V+ L+    ++  L  +E    V+  ++K
Sbjct: 447 PRYELVQRSGVRLLL---NQVLSLSGIEFEKVVKKKMMK 477


HSP 2 Score: 43.1 bits (100), Expect = 7.4e-03
Identity = 28/115 (24.35%), Postives = 53/115 (46.09%), Query Frame = 1 

Query: 57  KYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVIL 116
           K + ++ F    G   S I  ++  RP I    ++ NLKP   FLE +GI      K+I 
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290

Query: 117 WNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNID 172
             P IL+ S   +L  +  F+ +   ++E +   + R   ++++  +  ++P ++
Sbjct: 291 RFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTME 344

[Close]
BLAST of ClCG11G012890 vs. TrEMBL
Match: A0A067L028_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.7e-92
Identity = 180/371 (48.52%), Postives = 250/371 (67.39%), Query Frame = 1 

Query: 9   LLYFIQKRFVNTVSSSTL----PLASVS-------TIEFLKNSCGL-------ACRKLLT 68
           L + IQKRF+N  ++  L    PL + S       T++FL  SCGL         R L  
Sbjct: 9   LFFHIQKRFLNASATGKLSPRSPLPTTSNSSSSTFTVQFLVKSCGLPLKSARSVSRTLQL 68

Query: 69  DEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPL 128
           DEKN Q+Y++++   KS+ F  +Q+AKL+  +PAIL  RV  NL PKF +L+E G  G L
Sbjct: 69  DEKNQQRYQSVMELLKSHNFSGTQVAKLIVKKPAILQCRVENNLFPKFNYLKENGFAGEL 128

Query: 129 LPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNI 188
           LP++ L NP I+ R+LN  +KP+F F++ +L+S + V+AAIRR+SWLLT D KG MQPNI
Sbjct: 129 LPELFLSNPVIIQRALNSHIKPTFDFLRSVLDSDDKVVAAIRRSSWLLTSDLKGRMQPNI 188

Query: 189 DVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSM 248
           D+LV  GVP+ +I K+++LQPR I +  DRMV+AV AV  LG +P A  FVHA+RVM+SM
Sbjct: 189 DLLVKVGVPAHSIEKIVILQPRVISQNHDRMVHAVHAVNNLGIQPTARRFVHAVRVMMSM 248

Query: 249 NDSTWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLIS 308
           +D TWKKK  +LK+ G SE+EI +AFK++PH LA SEEK ++  DF  NT KL P TLI+
Sbjct: 249 SDFTWKKKFELLKNVGWSEEEIFSAFKKKPHFLASSEEKFKNAMDFYLNTMKLQPQTLIA 308

Query: 309 YPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPD 362
            P F  + ++KRL PRY VL+ L+ K LI+  KKI  L ++ E++F +N+V K+  E+P 
Sbjct: 309 SPIFLMHSVDKRLRPRYNVLQALESKKLIEGRKKIEWLLLISEKNFQKNFVSKYAAEVPG 368

[Close]
BLAST of ClCG11G012890 vs. TrEMBL
Match: B9GLU5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-91
Identity = 178/370 (48.11%), Postives = 251/370 (67.84%), Query Frame = 1 

Query: 2   SKISSTFLLYFIQKRFVNTVSSSTLPLASVST-------IEFLKNSCGLACR-------K 61
           +K++   LL  +QKRF++T SSST  L+ +ST       ++FL NSCGL  +       K
Sbjct: 3   TKVAMRNLLPLLQKRFLSTSSSSTPTLSPLSTAPSSSFTVDFLINSCGLPSKSALSVSQK 62

Query: 62  LLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIV 121
           L  DEK+ QK ++++ F K++GF+ + + KL+  RP +L   V  NLKPKFEFL   G V
Sbjct: 63  LQLDEKSIQKPQSVLEFLKAHGFKETHVVKLIEKRPDVLRRGVDTNLKPKFEFLIANGFV 122

Query: 122 GPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQ 181
           G LLP++I  NP +L R+L   +KP F + K +L S + ++AA +R +  LT+D+K I+Q
Sbjct: 123 GKLLPELITSNPNVLERALESNMKPCFEYFKSILGSNDMIVAASKRCAVFLTYDWKSIIQ 182

Query: 182 PNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVM 241
           PN+++L+ EGVP   + K+IV QPR I ++ DRMVYAV AVK LG EPKA MF++ALR +
Sbjct: 183 PNVELLIKEGVPEERVVKMIVAQPRIIYQRRDRMVYAVNAVKNLGLEPKAPMFIYALRSI 242

Query: 242 VSMNDSTWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGT 301
           +SMN+ TWKKKI V+KSFG +E+EIL AFK+ P  L+ SEEKMR   DF  NT K++   
Sbjct: 243 LSMNEFTWKKKIEVMKSFGWTEEEILRAFKQYPFQLSSSEEKMRKSMDFLLNTIKMERQA 302

Query: 302 LISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDE 358
           +I+ PKF  Y   KRL PRY VL++LK K LI+  KK   L  + E++F+ENYV K+ D+
Sbjct: 303 IIACPKFLMYSTEKRLRPRYDVLKILKSKKLIEIGKKTNYLLTVSEKNFLENYVTKYADK 362

[Close]
BLAST of ClCG11G012890 vs. TrEMBL
Match: M5XTI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.3e-90
Identity = 172/358 (48.04%), Postives = 245/358 (68.44%), Query Frame = 1 

Query: 9   LLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEKNPQKYEAI 68
           LL  +QKR + T+ + T  L S  T+E+L  SCGL       A +KL  D+K   + +++
Sbjct: 9   LLSLVQKRLLATLPTPTAALCSSFTVEYLVKSCGLPLESAISASKKLQIDKKQTHRIDSM 68

Query: 69  ISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTI 128
           + F KS GF+++QIAKL++ RP ILH +V  NL+PKF FL E G VG  LP+++L NP I
Sbjct: 69  LKFLKSNGFDDAQIAKLITKRPTILHYKVLSNLEPKFNFLIENGFVGQNLPELVLLNPVI 128

Query: 129 LSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSR 188
           L+RSL+  +KP+  F+K++L S  +++AA +R+SWLL  D  G +QPN+ +L  EGVP  
Sbjct: 129 LTRSLDSHIKPAVQFLKKLL-STNDMLAAAKRSSWLLNMDSVGTIQPNVALLQSEGVPLD 188

Query: 189 NITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINV 248
            ITK+I+ QPRT+M+ VDRM YAV+ +K+LG +P   MFV A+RVM+SM +STWK+KI  
Sbjct: 189 VITKMILFQPRTVMQNVDRMAYAVRTIKDLGIDPTGPMFVRAVRVMISMKESTWKRKIEF 248

Query: 249 LKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNK 308
            KS+G SE  +L+ FKR+P CLACSEEK+  V DF  NT KL+P T+I+ P    +G  K
Sbjct: 249 FKSYGWSEDVVLSVFKRQPFCLACSEEKLGRVMDFFLNTVKLEPETMIANPMLLMHGFEK 308

Query: 309 RLWPRYKVLEVLKVKNLIKK-NKKIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGN 359
            + PRY V ++L  K LI + NK++  L    ER F++ YVLK+L+E+PDL++IY  +
Sbjct: 309 TVLPRYNVFKILVSKELINRDNKRLCWLITQSERRFLDYYVLKYLNEVPDLLEIYHSS 365

[Close]
BLAST of ClCG11G012890 vs. TrEMBL
Match: F6HV96_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00030 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-89
Identity = 177/373 (47.45%), Postives = 251/373 (67.29%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNT--------VSSSTLPLASVS-TIEFLKNSCGLAC------ 60
           M+K+    LL  +QKRF+ T        +SSS+  L S S T +FL  SCGL        
Sbjct: 1   MAKLHFQSLLCLMQKRFLTTSSTLYTSSLSSSSSTLLSPSYTAQFLVKSCGLPLDSAISI 60

Query: 61  -RKLLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEI 120
            +KL  DE   QK+E+++ F KS+GF ++ +AKLVS  P IL +RV   LK K ++L + 
Sbjct: 61  SQKLNLDENKRQKHESVLEFLKSHGFSDTHVAKLVSKCPPILQARVDM-LKLKIDYLHDS 120

Query: 121 GIVGPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKG 180
           G VGP+L ++I+ NP IL RSL+ Q+KPSF F+KE LE+ E + AAI+R SWLLTFD K 
Sbjct: 121 GFVGPVLHELIVSNPAILRRSLDKQIKPSFDFLKEFLETNEKIAAAIKRESWLLTFDLKK 180

Query: 181 IMQPNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHAL 240
           I++PN  +L+ EGVP   ++KLI LQPR IM+ VDRMVYA +  + LG +P   ++V A+
Sbjct: 181 ILKPNTFLLINEGVPHSRMSKLITLQPRVIMQHVDRMVYATERARSLGIKPTDPIYVTAI 240

Query: 241 RVMVSMNDSTWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLD 300
            V++SM +STWK+K+ + + FG +E EIL A KR+PH +ACSEEK++ + +F  NT KL 
Sbjct: 241 TVILSMTESTWKRKVELYEKFGFTEVEILKAIKRQPHFMACSEEKIKSLMNFYTNTMKLK 300

Query: 301 PGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKH 358
           P  + +YP+   Y  + R+ PR+ VL +L  K L+KK+KKIA L    E SF+ NYV+K+
Sbjct: 301 PSAIATYPRLLLYSFDARIRPRFNVLNILASKKLLKKHKKIAWLLTQSEASFLNNYVIKY 360

[Close]
BLAST of ClCG11G012890 vs. TrEMBL
Match: A5CAF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021879 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.6e-89
Identity = 175/373 (46.92%), Postives = 249/373 (66.76%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNT---------VSSSTLPLASVSTIEFLKNSCGLAC------ 60
           M+K+    LL  +QKRF+ T          SSS+  L+   T +FL  SCGL        
Sbjct: 1   MAKLHFKSLLCLMQKRFLTTSSTLYTSSLXSSSSTLLSPSYTAQFLVKSCGLPLDSAISI 60

Query: 61  -RKLLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEI 120
            +KL  DE   QK+E+++ F KS+GF ++ +AKLVS  P IL +RV   LK K ++L + 
Sbjct: 61  SQKLNLDENKRQKHESVLEFLKSHGFSDTHVAKLVSKCPPILQARVDM-LKLKXDYLHDS 120

Query: 121 GIVGPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKG 180
           G VGP+L ++I+ NP IL RSL+ Q+KPSF F+KE LE+ E + AAI+R SWLLTFD K 
Sbjct: 121 GFVGPVLHELIVSNPAILRRSLDKQIKPSFDFLKEFLETNEKIAAAIKRESWLLTFDLKK 180

Query: 181 IMQPNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHAL 240
           I++PN  +L+ EGVP   ++KLI LQPR IM+ VDRMVYA +  + LG +P   ++V A+
Sbjct: 181 ILKPNTFLLINEGVPHSRMSKLITLQPRVIMQHVDRMVYATERARSLGIKPTDPIYVTAI 240

Query: 241 RVMVSMNDSTWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLD 300
            V++SM +STWK+K+ + + FG +E EIL A KR+PH +ACSEEK++ + +F  NT KL 
Sbjct: 241 TVILSMTESTWKRKVELYEKFGFTEVEILKAIKRQPHFMACSEEKIKSLMNFYTNTMKLK 300

Query: 301 PGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKH 358
           P  + +YP+   Y  + R+ PR+ VL +L  K L+KK+KKIA L    E SF+ NYV+K+
Sbjct: 301 PSAIATYPRLLLYSFDARIRPRFNVLNILASKKLLKKHKKIAWLLTQSEASFLTNYVIKY 360

[Close]
BLAST of ClCG11G012890 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 208.0 bits (528), Expect = 9.8e-54
Identity = 114/333 (34.23%), Postives = 182/333 (54.65%), Query Frame = 1 

Query: 33  TIEFLKNSCGL-------ACRKLLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAI 92
           T+ +L +SCGL       A RKLL D  +P++   +++  + +GF  +QI+ LV  RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKE 152
           L +     L PK  F   IG+   LL + +  +PTIL+RSL  QL PS+ F+K +L+S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 NVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAV 212
            ++AA+RR +W+   D    + PNI+ +   GVP + I  L+   P  +M+K        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KAVKELGFEPKAGMFVHALRVMVSM-NDSTWKKKINVLKSFGLSEKEILTAFKREPHCLA 272
           K  +E+GF P+   FV A+  +    N S W K   V + +G SE +I+ AFK+ PHC+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKK 332
            SE K+    ++  N   + P ++   P    + L KR+ PR  V +VL    L+K++  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAQLFMLEERSFVENYVLKHLDEIPDLMDIYRG 358
           +  L +  E+ F+E  V+K+ +E+P+LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of ClCG11G012890 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.9e-37
Identity = 92/351 (26.21%), Postives = 168/351 (47.86%), Query Frame = 1 

Query: 18  VNTVSSSTL----PLASVSTIEFLKNSCGLACRKLLTDEK-----NPQKYEAIISFFKSY 77
           V+ V S  L    P     T+ +L +SCGL+     ++ +     + +K +++++ FK +
Sbjct: 39  VSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDH 98

Query: 78  GFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNY 137
           GF N QI  ++   P +L       + PK  F   IG       K+I  +P +LS SL+ 
Sbjct: 99  GFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHK 158

Query: 138 QLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIV 197
           +L P +  +K +L  +E+V+  ++R     +      +   + +    GVP ++I  L+ 
Sbjct: 159 RLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQ 218

Query: 198 LQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLS 257
             P T   +  R    +  V   GF+PK   FVHA+      ++S  ++K  + + FG S
Sbjct: 219 ASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWS 278

Query: 258 EKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYK 317
           +++ + A  R P+C+  S+EK+    ++  N   L    +++ P      + KR+ PR +
Sbjct: 279 KEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQ 338

Query: 318 VLEVLKVKNLIKKNK-KIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGN 359
           V+ +L  K L+KK       +  L+   F++ +VLK+ DE+P L+  +  N
Sbjct: 339 VISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]
BLAST of ClCG11G012890 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-36
Identity = 101/342 (29.53%), Postives = 172/342 (50.29%), Query Frame = 1 

Query: 23  SSTLPLASVST---IEFLKNS-----CGLACRKLLTDEKNPQKYEAIISFFKSYGFENSQ 82
           SS    AS+S    +EFL+++       +A      + K+ ++  ++I   KSY F ++Q
Sbjct: 28  SSNATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQ 87

Query: 83  IAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLKPSF 142
           I K + + P ++   V K L+PK  F ++IG  G  L K +  N +++  SL  +L P+ 
Sbjct: 88  IQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTV 147

Query: 143 CFIKEMLESK-ENVIAAIRRASWLL-TFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQPR 202
             +K ++  K E++   + R  WLL + D    + PNI  L   G+    +  L+  QPR
Sbjct: 148 EILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPR 207

Query: 203 TIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLSEKEI 262
                 +++   V    +LGF   + M VHA+  + S+++ T+ +K+ +  + G SE EI
Sbjct: 208 IFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEI 267

Query: 263 LTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEV 322
               +R P  + CSE+K+    +F      L+   L   P    Y L KR+ PR KVL++
Sbjct: 268 TDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQI 327

Query: 323 LKVKNLI----KKNKKIAQLFMLEERSFVENYVLKHLDEIPD 351
           L+ K L+    KK K +  +  + E +F+E YV++  DEI +
Sbjct: 328 LREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAE 369

[Close]
BLAST of ClCG11G012890 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 75/267 (28.09%), Postives = 139/267 (52.06%), Query Frame = 1 

Query: 12  FIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLACRKLLT--------DEKNPQKYEAIIS 71
           F  K F +T++  + P  S  T+ +L  S GL  +   T        D+ NP   +++++
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNP---DSVLN 92

Query: 72  FFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILS 131
             +S GF++SQI++++   P +L +   K+L+PK +FL+  G     + +++   PTIL 
Sbjct: 93  LLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILD 152

Query: 132 RSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNI 191
           +     +   + F+K++++  +++  +            KG    NI VL   GVP + +
Sbjct: 153 KKGEESVSLYYDFVKDIMQDGKSLCISCPEGK-------KGNRIRNISVLRELGVPQKLL 212

Query: 192 TKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLK 251
             L++ + + +  K ++   ++K V ++GF+P    FV AL V+  M++ T ++K+NV K
Sbjct: 213 FSLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYK 272

Query: 252 SFGLSEKEILTAFKREPHCLACSEEKM 271
             G SE EI   FK+ P+ L  SE+K+
Sbjct: 273 RLGFSEAEIWAIFKKWPYFLKFSEKKI 288


HSP 2 Score: 56.2 bits (134), Expect = 4.8e-08
Identity = 34/118 (28.81%), Postives = 53/118 (44.92%), Query Frame = 1 

Query: 239 INVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYG 298
           I +    G S  +     KR P C A S E +R   +            ++  P    Y 
Sbjct: 327 IEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYS 386

Query: 299 LNKRLWPRYKVLEVLKVKNLI-KKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMDIY 356
           L KR+ PR  V++ L  K LI  +N  I+ + +  ++ F++ YV+KH   +P LM I+
Sbjct: 387 LEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHDKLVPKLMAIF 444

[Close]
BLAST of ClCG11G012890 vs. TAIR10
Match: AT1G62010.1 (AT1G62010.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 112.5 bits (280), Expect = 5.6e-25
Identity = 103/385 (26.75%), Postives = 172/385 (44.68%), Query Frame = 1 

Query: 13  IQKRFVNTVSSSTLPLASVSTI-EFLKNSCGLACRKLLTDEKNPQKYEAIISFFKSYGFE 72
           +Q    ++ S S+   A VS   E  K+S  L   +L T   +    ++++   +SYGF 
Sbjct: 24  LQNESFSSYSFSSASAADVSPKGETFKSSSFLDSLRLATKLTDKGNSDSVLDLLRSYGFT 83

Query: 73  NSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLK 132
           +SQI+ ++     +L    + +L  K +FL+  G     L +V+   P IL +     L 
Sbjct: 84  DSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVSTVPKILGKREGKSLS 143

Query: 133 PSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQP 192
             + FIK ++E+ ++  +   + S  L    +G    NI VL   GVP + +  L++ + 
Sbjct: 144 RYYDFIKVIIEADKS--SKYEKISHSLA---QGNKIRNILVLRELGVPQKRLLLLLISKS 203

Query: 193 RTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLSEKE 252
           + +  K ++   ++K V E+GF+P    FVHAL ++  M+D T ++KI V +S G S  +
Sbjct: 204 QPVCGK-EKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEKIRVYRSVGFSVDD 263

Query: 253 ILTAFKREPHCLACSEEKM-------------RDVADFCF-----------NTAKLDPGT 312
           +   FK+ P  L  SE+K+             RDV    F              K     
Sbjct: 264 VWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEF 323

Query: 313 LISYPKF-----------FRYGLNKRLWPRYKVLEVLKVKNLIKKN-KKIAQLFMLEERS 359
           L+    +             Y L KR  PR  V++VL  K L++     ++ +      S
Sbjct: 324 LVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESELPPMSSVLTSTSES 383

[Close]
BLAST of ClCG11G012890 vs. NCBI nr
Match: gi|659090316|ref|XP_008445950.1| (PREDICTED: uncharacterized protein LOC103488825 [Cucumis melo])

HSP 1 Score: 491.5 bits (1264), Expect = 1.3e-135
Identity = 259/370 (70.00%), Postives = 300/370 (81.08%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEK 60
           MSKISS+FLL+F   RF+NT+ +STLPLASVSTI+FL NSCGL       A RKL   EK
Sbjct: 20  MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 79

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           N Q+Y A+I F KS+GFEN QIAKLVS +P+IL SRVS NLKPKFEFL+EIG VGPLLPK
Sbjct: 80  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 139

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           +I+ +P+IL++SL+ +LKPSF  +KEML S E V AAI RASWLLT+DFKG+++ N DVL
Sbjct: 140 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 199

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           V EGVPSRNI K+I   PRTIM++VD+M+  VK VKELG EPKAGMF  A+ V + M+DS
Sbjct: 200 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 259

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV+KS G SEKEILTAFKR P CL CSEEKMRDVADFCFNTAKLDPGTLIS P 
Sbjct: 260 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 319

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQL--FMLEERSFVENYVLKHLDEIPDL 360
           FF+  +NKRL PRYKVLEVLKVKNL+ +NKKIA    FM  ER FVEN V+KHLDEIP+L
Sbjct: 320 FFKLSVNKRLRPRYKVLEVLKVKNLL-RNKKIALAWWFMQGEREFVENNVVKHLDEIPNL 379

Query: 361 MDIYRGNAAA 362
           MDIYRGN A+
Sbjct: 380 MDIYRGNDAS 388

[Close]
BLAST of ClCG11G012890 vs. NCBI nr
Match: gi|659090428|ref|XP_008446011.1| (PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134
Identity = 255/368 (69.29%), Postives = 295/368 (80.16%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLAC-------RKLLTDEK 60
           M K SSTFLL+FIQKRF+NTVS+STLPLASVST+EFL NSCGL+        RKL  DEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           N Q+YEA+I F KS+G EN QIAKLVS +P IL S+VS NLKPKFEFL+EIG VGPLL K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           +IL NP I  R+L+ QLKPSF F+KE+LES E V AAIR + WLL  DFKGI++ NIDVL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
             EGVPSRNI KLIV   RTIMRKVDRM+  VK VKELG EPKAGMFVHALR+  S++DS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV+KS G SE EI TAFK++P  L CSEEKMRDVADFCFNTAKLDPG++I  PK
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
            F+  ++KRL PRYKVLEVLKVKNL+ KN  IA + +  ER+FV+ +V++HLDEIP+LMD
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLL-KNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMD 360

Query: 361 IYRGNAAA 362
           IYRGN  A
Sbjct: 361 IYRGNVTA 367

[Close]
BLAST of ClCG11G012890 vs. NCBI nr
Match: gi|778704400|ref|XP_004135534.2| (PREDICTED: uncharacterized protein LOC101204518 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 5.3e-134
Identity = 249/368 (67.66%), Postives = 297/368 (80.71%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLAC-------RKLLTDEK 60
           M KISSTFLL+FI KRF+NT+S+STLPL SVSTI+FL NSCGL+        R L  D+K
Sbjct: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + Q+YE++I F KS+GF+N QIA LVS RP IL SRVS NLKPKFEFL+EIG VGPLLPK
Sbjct: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           +IL NP +L RSL+  LKPS  F+KE+LES E VIAAI  +SWLLT+DF+ +++PN+DVL
Sbjct: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
             EGVPSRNI KLI L PRTIM+KVDRM++AVK  KELG EPK+GMF++A+ V +SM+DS
Sbjct: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
            WKKKINV+KS G SE EI TA+K+ P  L CSEEK+RDVADFC NTAKLDPGTLI+YP 
Sbjct: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF + + KRL PRY+VLEVLK+KNL+ KNKKIA  F+  ER FVE YV+KHLDEIP+LMD
Sbjct: 301 FFTFSVEKRLQPRYRVLEVLKLKNLL-KNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNAAA 362
           IYRGN  A
Sbjct: 361 IYRGNVPA 367

[Close]
BLAST of ClCG11G012890 vs. NCBI nr
Match: gi|778700689|ref|XP_011654901.1| (PREDICTED: uncharacterized protein LOC101206293 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 1.3e-132
Identity = 257/369 (69.65%), Postives = 289/369 (78.32%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL--------ACRKLLTDE 60
           M K SSTFLL+F QKR +NT+S+STLPL SVST+EFLKNSC L        A RK   DE
Sbjct: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60

Query: 61  KNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLP 120
           KN Q+YEAII F KS+GFE+S+IAKLVS RP IL SRVS NLKPKFEFL+EIG VGPLL 
Sbjct: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120

Query: 121 KVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDV 180
           K+ L NP IL R+L+ QLKP F F+KEML S E VI+AIRR+ WLLT DFKGI++ NIDV
Sbjct: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180

Query: 181 LVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMND 240
           L  EGVPS NI KLI    RTIM  VDRM+  VK VKELG EPK+  F+HALRV  +M+D
Sbjct: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240

Query: 241 STWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYP 300
           STWKKKINVLKS G SE EILT FKR+P CLA SEE  RDVADFCFNTAKLDP T+ISYP
Sbjct: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300

Query: 301 KFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLM 360
           KFF Y ++K LWPRYKVLEVLKVKNL+ K++K+A+   L ER FVE YVLKHLDEIP LM
Sbjct: 301 KFFTYSVDK-LWPRYKVLEVLKVKNLL-KDRKVARALTLVERQFVETYVLKHLDEIPKLM 360

Query: 361 DIYRGNAAA 362
           DIYRGN  A
Sbjct: 361 DIYRGNVTA 367

[Close]
BLAST of ClCG11G012890 vs. NCBI nr
Match: gi|659090430|ref|XP_008446012.1| (PREDICTED: uncharacterized protein LOC103488866 [Cucumis melo])

HSP 1 Score: 479.9 bits (1234), Expect = 3.8e-132
Identity = 253/368 (68.75%), Postives = 294/368 (79.89%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLAC-------RKLLTDEK 60
           M K SSTFLL+FIQKRF+NTVS+STLPLASVSTI+FL NSCGL+        RKL  DE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           N Q+Y A+I FFKS+GFE+SQIAKLVS +P+ILHS VS NLKPKFEFL+EIGIVGPLL K
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           +IL N  IL RSL+ QLKP+F  IKEML S + V AAI R SWLLT +  G ++ NIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           V EGVPS NI ++I L PR++MRKVDRM+ AVK VKELG EPK GMFV+A+ V VSM+DS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV+KS G SE EI TAFKR P  L CSEEKMRD+ADFC NTAKLDPGTLISYP+
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF Y ++KRL PRYKVLEVLK+KNL+ K K I  LF+  ER FVE Y++KH D+IP+L+D
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLL-KTKNIGLLFVEGERRFVEKYIVKHFDKIPNLID 360

Query: 361 IYRGNAAA 362
           IY GN  A
Sbjct: 361 IYLGNVKA 367

The following BLAST results are available for this feature:
BLAST of ClCG11G012890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF5_ARATH3.4e-0821.86Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of ClCG11G012890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067L028_JATCU2.7e-9248.52Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1[more]
B9GLU5_POPTR1.3e-9148.11Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1[more]
M5XTI6_PRUPE4.3e-9048.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1[more]
F6HV96_VITVI1.6e-8947.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00030 PE=4 SV=... [more]
A5CAF4_VITVI3.6e-8946.92Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021879 PE=4 SV=1[more]
BLAST of ClCG11G012890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.19.8e-5434.23 Mitochondrial transcription termination factor family protein[more]
AT1G21150.14.9e-3726.21 Mitochondrial transcription termination factor family protein[more]
AT5G64950.11.9e-3629.53 Mitochondrial transcription termination factor family protein[more]
AT3G46950.11.0e-2628.09 Mitochondrial transcription termination factor family protein[more]
AT1G62010.15.6e-2526.75 Mitochondrial transcription termination factor family protein[more]
BLAST of ClCG11G012890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090316|ref|XP_008445950.1|1.3e-13570.00PREDICTED: uncharacterized protein LOC103488825 [Cucumis melo][more]
gi|659090428|ref|XP_008446011.1|1.1e-13469.29PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo][more]
gi|778704400|ref|XP_004135534.2|5.3e-13467.66PREDICTED: uncharacterized protein LOC101204518 [Cucumis sativus][more]
gi|778700689|ref|XP_011654901.1|1.3e-13269.65PREDICTED: uncharacterized protein LOC101206293 [Cucumis sativus][more]
gi|659090430|ref|XP_008446012.1|3.8e-13268.75PREDICTED: uncharacterized protein LOC103488866 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G012890.1ClCG11G012890.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 226..324
score: 2.1E-16coord: 62..255
score: 3.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 285..316
score: 120.0coord: 112..143
score: 180.0coord: 148..179
score: 110.0coord: 253..284
score: 590.0coord: 218..248
score: 8.8coord: 76..107
score: 1.1E-4coord: 184..214
score: 2
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 2..359
score: 1.1E
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 2..359
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG11G012890Cla022894Watermelon (97103) v1wcgwmB103
ClCG11G012890Cla97C11G218790Watermelon (97103) v2wcgwmbB064
ClCG11G012890Bhi07G000948Wax gourdwcgwgoB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG11G012890Cucumber (Gy14) v1cgywcgB483
ClCG11G012890Cucurbita maxima (Rimu)cmawcgB338
ClCG11G012890Cucurbita maxima (Rimu)cmawcgB339
ClCG11G012890Cucurbita maxima (Rimu)cmawcgB621
ClCG11G012890Cucurbita moschata (Rifu)cmowcgB337
ClCG11G012890Cucurbita moschata (Rifu)cmowcgB335
ClCG11G012890Cucurbita moschata (Rifu)cmowcgB624
ClCG11G012890Wild cucumber (PI 183967)cpiwcgB369
ClCG11G012890Cucumber (Chinese Long) v2cuwcgB352
ClCG11G012890Melon (DHL92) v3.5.1mewcgB047
ClCG11G012890Cucurbita pepo (Zucchini)cpewcgB018
ClCG11G012890Cucurbita pepo (Zucchini)cpewcgB357
ClCG11G012890Bottle gourd (USVL1VR-Ls)lsiwcgB264
ClCG11G012890Cucumber (Gy14) v2cgybwcgB327
ClCG11G012890Melon (DHL92) v3.6.1medwcgB047
ClCG11G012890Silver-seed gourdcarwcgB0698
ClCG11G012890Silver-seed gourdcarwcgB0810
ClCG11G012890Cucumber (Chinese Long) v3cucwcgB375