ClCG11G012370 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G012370
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RNA-directed DNA polymerase (Reverse transcriptase)
Location	CG_Chr11 : 25346715 .. 25348662 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATGTCAAGTATATACTCGTTTTTTTGCTATTGCTAGATCCCCATTGATATTTGTCCAAGAGGCCTGGAATGCTACTGGTTCATCTTGGTCTCCTCGGTTCCGTAGACCCCCGCTTAATCGTGAAGCTGAGGCATGGCAACAACTTTCCATGCAACTAGACTCCCCCTAACAATCGCCAATTTGCCAACAGTATGAAATGGAGCTTTGCATCGAATGGGATCTTCGGTGTTAAATCATATAAGATCTTCCTTGTGGCTGCTTCCCAACCCAATAATAACATCAATGTTGGCTCTCTATGGTCCAAGCTTTTGCCAAAAAAGTGTAAATTTTTTGTCTGGACCATACTACATAATGGTATAAACACCTCTGATATCTACCAGGCTCGGAATCCTAAACTGCATATCACCCCGAACTAGTGTGTTTTGTGTAGAATACATGGTGAATCTATTGAACATCTTTTTATGTCGTGTTCTTTCTTGAACACCATTTGGTCTATTATTACTGGTTCTAATTATGTTGCCTTGCCAAGAACCCTTACACTCTCTTCTGAGCTACTGGATGAATCTCCCGCTTAAAGAAAGGCCAAAATTTTATGGAGTATCATTATTGGAGCTTCTGTTTGGAAGATTGAAAGGAACGAGCGCACACATCTTTCAAGATGTGGATAGATCTAGTATTGCTTTATGGGATGATATTCTATCTATGAATGCTTTATGGTGTAACAAATCATCTCTTTTTTATAGTTACGATGCTTCTACTATTGCACTTAACTGGAAGGTTTTCCTCTGGCATTCCTTTTTTGCTCTCTTTTGTAATATGAGCTATCTCTCTTGCTCATCTTGTACAGTATTCTCATATTAATGCATCTTTTTTGGACTCAAGGTTTGATGAGGGTGATAGGGATGTGTCAACCTAGTTAAGATATCCTGATGCACTTTTTGATTCCACCTCCCTAGTTAAGATATCCTGATGCACTTTTTGATTCCACCTCCTTTAGTACTTTGTTAAAAAAAAATGGTAGAAAAAAGTATTTCATTTCTTAAGATAGGTTTTTTAAAAATATTTACATGATTTTGTTTTAGATATTCAATATTTTAACTATTTTGGACATTTGGTTTATTTTAATTTTAAGGTTTAAATCTTATTTTGGTTCCTAAACTTTGAATCATATTCTACTTTGGTCCGTAAACTTTCAAAACTTTTGCTTTAGTCCTTTAACTTTTAAAAAGGGTTTATTTTAGTATTTGCTGTTAATATTTTGTTAACTCTTGATGGAGACAGATTTGTAAAAGCTAGTGGCTGCTAGATGGTGATGAAAACTCTGCTTTCTTTCACAAATCGTGCCTAGCTCGAAGAAGATCAACTTCATTGCTGAAATCAAGAATGTTGATTTTCTTTCTATTCCGATGTTGATATTGAAAAGGCTTTCACCGATCACTTTAAAGATACATACACAAACTCTGAAAAGGATCAATGGATGATTAACAATCTTAATTAGAGAAGAATCAGCAACCAGAGCTCCACTTTGCTTATTAATCCTTTTGATGAAACAGAGGTTCATACCTGTCTTAATATGTTGGGGAATGACAAGACTCCTGGACTGGATGGCTTTACTATGGAATTCTTCAAAAAGTTTTGGAACATCTTCAAAGCAGACATAATGAACTTGTTCCACGATTTTTTTCTAGAAAGGTATCATCAATAAGTCCCTAAATGCCACTTACATTGCACTCATCCCCAAGAAGCAGAATCCTCAAAAGGTAACTGACTATAGGCCCATCAGTTTAATTATTACCAGTGTGTATAAGATTATTGCTAAAGTCTTTGTTGGGCACCTCAAATACACCTTGCCAGAGACCATCTCTCAAAACCATTCTGTCTTTGTCACAGGAAGACAGATAATTGATCCCATCCTCATTGCCAACGAGATTGCTGACTACTAG

mRNA sequence

ATGCTATGTCAAGTATATACTCGTTTTTTTGCTATTGCTAGATCCCCATTGATATTTGTCCAAGAGGCCTGGAATGCTACTGGTTCATCTTGGTCTCCTCGGTTCCGTAGACCCCCGCTTAATCAAAGGCCAAAATTTTATGGAGTATCATTATTGGAGCTTCTGTTTGGAAGATTGAAAGGAACGAGCGCACACATCTTTCAAGATGTGGATAGATCTAGTATTGCTTTATGGGATGATATTCTATCTATGAATGCTTTATGGTGTAACAAATCATCTCTTTTTTATAGTTACGATGCTTCTACTATTGCACTTAACTGGAAGAAAGGTATCATCAATAAGTCCCTAAATGCCACTTACATTGCACTCATCCCCAAGAAGCAGAATCCTCAAAAGATTATTGCTAAAGTCTTTGTTGGGCACCTCAAATACACCTTGCCAGAGACCATCTCTCAAAACCATTCTGTCTTTGTCACAGGAAGACAGATAATTGATCCCATCCTCATTGCCAACGAGATTGCTGACTACTAG

Coding sequence (CDS)

ATGCTATGTCAAGTATATACTCGTTTTTTTGCTATTGCTAGATCCCCATTGATATTTGTCCAAGAGGCCTGGAATGCTACTGGTTCATCTTGGTCTCCTCGGTTCCGTAGACCCCCGCTTAATCAAAGGCCAAAATTTTATGGAGTATCATTATTGGAGCTTCTGTTTGGAAGATTGAAAGGAACGAGCGCACACATCTTTCAAGATGTGGATAGATCTAGTATTGCTTTATGGGATGATATTCTATCTATGAATGCTTTATGGTGTAACAAATCATCTCTTTTTTATAGTTACGATGCTTCTACTATTGCACTTAACTGGAAGAAAGGTATCATCAATAAGTCCCTAAATGCCACTTACATTGCACTCATCCCCAAGAAGCAGAATCCTCAAAAGATTATTGCTAAAGTCTTTGTTGGGCACCTCAAATACACCTTGCCAGAGACCATCTCTCAAAACCATTCTGTCTTTGTCACAGGAAGACAGATAATTGATCCCATCCTCATTGCCAACGAGATTGCTGACTACTAG

Protein sequence

MLCQVYTRFFAIARSPLIFVQEAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLKGTSAHIFQDVDRSSIALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKIIAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIADY

Homology

[Close]

BLAST of ClCG11G012370 vs. TrEMBL
Match: A5BPI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008538 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 57/176 (32.39%), Postives = 74/176 (42.05%), Query Frame = 1


Query: 22  EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
           E+W   G  WSP  R         F    + + +F   +       G +  +FQD     
Sbjct: 523 ESWRVEGLDWSPISRESASRLESPFTEEEIYKAIFQMDRDXAPGPDGFTIAVFQDC---- 582

Query: 82  IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
              WD I         K  L   +D        + GIIN+S NA++I L+PKK   +KI 
Sbjct: 583 ---WDVI---------KEDLVRVFDEFH-----RSGIINQSTNASFIVLLPKKSMAKKIS 642

Query: 142 --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                         IAKV  G L+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 643 NYRPISLITSLYKIIAKVLAGRLRGILHETIHSTQGAFVQGRQILDAVLIANEIVD 677

[Close]

BLAST of ClCG11G012370 vs. TrEMBL
Match: A5BPI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008538 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.3e-03
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 1


Query: 114  KSLNATYIALIPKKQNPQ---------------KIIAKVFVGHLKYTLPETISQNHSVFV 173
            KSLNAT++  IPKK   +               K +AKV    LK    + +++    FV
Sbjct: 1366 KSLNATFLVFIPKKGGAKDLRYFRLISLMGGLYKWLAKVLANRLKKVEGKVVTKAQGAFV 1425

Query: 174  TGRQIIDPILIANEIAD 176
             GRQI+D +LIANE  D
Sbjct: 1426 EGRQILDAVLIANEAID 1442

HSP 2 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 57/176 (32.39%), Postives = 74/176 (42.05%), Query Frame = 1


Query: 22  EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
           E+W   G  WSP  R         F    + + +F   +       G +  +FQD     
Sbjct: 162 ESWRVEGLDWSPISRXSXSRLEXPFTXEEISKAIFQMDRDKAPGPDGFTIXVFQDC---- 221

Query: 82  IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
              WD I         K  L   +D        + GIIN+S NA++I L+PKK   +KI 
Sbjct: 222 ---WDVI---------KEDLVRVFDEFH-----RSGIINQSTNASFIVLLPKKSMAKKIS 281

Query: 142 --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                         IAKV  G L+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 282 DYRPISLITSLYKIIAKVLAGRLRGILHETIHSTQGAFVQGRQILDAVLIANEIVD 316

[Close]

BLAST of ClCG11G012370 vs. TrEMBL
Match: A5BSZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035610 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 57/176 (32.39%), Postives = 74/176 (42.05%), Query Frame = 1


Query: 22   EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
            E+W   G  WSP  R         F    + + +F   +       G +  +FQD     
Sbjct: 868  ESWRVEGLDWSPISRESASRLESPFXEEEIXKAIFQMDRDKAPGPDGFTIAVFQDC---- 927

Query: 82   IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
               WD I         K  L   +D        + GIIN+S NA++I L+PKK   +KI 
Sbjct: 928  ---WDVI---------KEDLVRVFDEFH-----RSGIINQSTNASFIVLLPKKSMAKKIS 987

Query: 142  --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                          IAKV  G L+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 988  BYRPISLITSLYKIIAKVLXGRLRGILHETIHSTQGAFVQGRQILDAVLIANEIVD 1022

[Close]

BLAST of ClCG11G012370 vs. TrEMBL
Match: A5C916_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010636 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 57/176 (32.39%), Postives = 75/176 (42.61%), Query Frame = 1


Query: 22  EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
           E+W+  G  WSP   +  L     F    + + +F   +       G +  +FQD     
Sbjct: 168 ESWSVEGLDWSPISEKSALRLDSPFIEEEISKAIFQLDRDKAPGPDGFTIAVFQDC---- 227

Query: 82  IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
              WD I         K  L         A   + GIIN+S NA++I L+PKK   +KI 
Sbjct: 228 ---WDVI---------KEEL-----VRVFAEFHRSGIINQSTNASFIVLLPKKSLTKKIS 287

Query: 142 --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                         I KV  GHL+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 288 DFRPISLITSLYKIIVKVLSGHLRGVLHETIHSTQGAFVQGRQILDTVLIANEIVD 322

[Close]

BLAST of ClCG11G012370 vs. TrEMBL
Match: A5BKJ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015612 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-09
Identity = 39/82 (47.56%), Postives = 49/82 (59.76%), Query Frame = 1


Query: 109 KGIINKSLNATYIALIPKKQNP---------------QKIIAKVFVGHLKYTLPETISQN 168
           KG+IN+S NAT+IA++PKK                   KIIAKV +G L+  L ETI  +
Sbjct: 753 KGVINQSTNATFIAMVPKKSQTFKISDYRPISLVTSLYKIIAKVLLGRLRKVLHETIFGS 812

Query: 169 HSVFVTGRQIIDPILIANEIAD 176
              FV GRQI+D ILIANE+ D
Sbjct: 813 QGAFVEGRQILDAILIANEVVD 834

[Close]

BLAST of ClCG11G012370 vs. NCBI nr
Match: gi|147798966|emb|CAN68165.1| (hypothetical protein VITISV_008538 [Vitis vinifera])

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 57/176 (32.39%), Postives = 74/176 (42.05%), Query Frame = 1


Query: 22  EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
           E+W   G  WSP  R         F    + + +F   +       G +  +FQD     
Sbjct: 523 ESWRVEGLDWSPISRESASRLESPFTEEEIYKAIFQMDRDXAPGPDGFTIAVFQDC---- 582

Query: 82  IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
              WD I         K  L   +D        + GIIN+S NA++I L+PKK   +KI 
Sbjct: 583 ---WDVI---------KEDLVRVFDEFH-----RSGIINQSTNASFIVLLPKKSMAKKIS 642

Query: 142 --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                         IAKV  G L+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 643 NYRPISLITSLYKIIAKVLAGRLRGILHETIHSTQGAFVQGRQILDAVLIANEIVD 677

[Close]

BLAST of ClCG11G012370 vs. NCBI nr
Match: gi|147798966|emb|CAN68165.1| (hypothetical protein VITISV_008538 [Vitis vinifera])

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-02
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 1


Query: 114  KSLNATYIALIPKKQNPQ---------------KIIAKVFVGHLKYTLPETISQNHSVFV 173
            KSLNAT++  IPKK   +               K +AKV    LK    + +++    FV
Sbjct: 1366 KSLNATFLVFIPKKGGAKDLRYFRLISLMGGLYKWLAKVLANRLKKVEGKVVTKAQGAFV 1425

Query: 174  TGRQIIDPILIANEIAD 176
             GRQI+D +LIANE  D
Sbjct: 1426 EGRQILDAVLIANEAID 1442

HSP 2 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 57/176 (32.39%), Postives = 74/176 (42.05%), Query Frame = 1


Query: 22   EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
            E+W   G  WSP  R         F    + + +F   +       G +  +FQD     
Sbjct: 868  ESWRVEGLDWSPISRESASRLESPFXEEEIXKAIFQMDRDKAPGPDGFTIAVFQDC---- 927

Query: 82   IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
               WD I         K  L   +D        + GIIN+S NA++I L+PKK   +KI 
Sbjct: 928  ---WDVI---------KEDLVRVFDEFH-----RSGIINQSTNASFIVLLPKKSMAKKIS 987

Query: 142  --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                          IAKV  G L+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 988  BYRPISLITSLYKIIAKVLXGRLRGILHETIHSTQGAFVQGRQILDAVLIANEIVD 1022

[Close]

BLAST of ClCG11G012370 vs. NCBI nr
Match: gi|147854383|emb|CAN81299.1| (hypothetical protein VITISV_006980 [Vitis vinifera])

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 57/176 (32.39%), Postives = 74/176 (42.05%), Query Frame = 1


Query: 22  EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
           E+W   G  WSP  R         F    + + +F   +       G +  +FQD     
Sbjct: 162 ESWRVEGLDWSPISRXSXSRLEXPFTXEEISKAIFQMDRDKAPGPDGFTIXVFQDC---- 221

Query: 82  IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
              WD I         K  L   +D        + GIIN+S NA++I L+PKK   +KI 
Sbjct: 222 ---WDVI---------KEDLVRVFDEFH-----RSGIINQSTNASFIVLLPKKSMAKKIS 281

Query: 142 --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                         IAKV  G L+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 282 DYRPISLITSLYKIIAKVLAGRLRGILHETIHSTQGAFVQGRQILDAVLIANEIVD 316

[Close]

BLAST of ClCG11G012370 vs. NCBI nr
Match: gi|147840966|emb|CAN66499.1| (hypothetical protein VITISV_010636 [Vitis vinifera])

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09
Identity = 57/176 (32.39%), Postives = 75/176 (42.61%), Query Frame = 1


Query: 22  EAWNATGSSWSPRFRRPPLNQRPKFYGVSLLELLFGRLK-------GTSAHIFQDVDRSS 81
           E+W+  G  WSP   +  L     F    + + +F   +       G +  +FQD     
Sbjct: 168 ESWSVEGLDWSPISEKSALRLDSPFIEEEISKAIFQLDRDKAPGPDGFTIAVFQDC---- 227

Query: 82  IALWDDILSMNALWCNKSSLFYSYDASTIALNWKKGIINKSLNATYIALIPKKQNPQKI- 141
              WD I         K  L         A   + GIIN+S NA++I L+PKK   +KI 
Sbjct: 228 ---WDVI---------KEEL-----VRVFAEFHRSGIINQSTNASFIVLLPKKSLTKKIS 287

Query: 142 --------------IAKVFVGHLKYTLPETISQNHSVFVTGRQIIDPILIANEIAD 176
                         I KV  GHL+  L ETI      FV GRQI+D +LIANEI D
Sbjct: 288 DFRPISLITSLYKIIVKVLSGHLRGVLHETIHSTQGAFVQGRQILDTVLIANEIVD 322

[Close]

BLAST of ClCG11G012370 vs. NCBI nr
Match: gi|147792395|emb|CAN70278.1| (hypothetical protein VITISV_015612 [Vitis vinifera])

HSP 1 Score: 70.1 bits (170), Expect = 4.4e-09
Identity = 39/82 (47.56%), Postives = 49/82 (59.76%), Query Frame = 1


Query: 109 KGIINKSLNATYIALIPKKQNP---------------QKIIAKVFVGHLKYTLPETISQN 168
           KG+IN+S NAT+IA++PKK                   KIIAKV +G L+  L ETI  +
Sbjct: 753 KGVINQSTNATFIAMVPKKSQTFKISDYRPISLVTSLYKIIAKVLLGRLRKVLHETIFGS 812

Query: 169 HSVFVTGRQIIDPILIANEIAD 176
              FV GRQI+D ILIANE+ D
Sbjct: 813 QGAFVEGRQILDAILIANEVVD 834

The following BLAST results are available for this feature:

BLAST of ClCG11G012370 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BPI6_VITVI	1.4e-09	32.39	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008538 PE=4 SV=1	[more]
A5BPI6_VITVI	7.3e-03	37.66	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008538 PE=4 SV=1	[more]
A5BSZ3_VITVI	1.4e-09	32.39	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035610 PE=4 SV=1	[more]
A5C916_VITVI	1.8e-09	32.39	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010636 PE=4 SV=1	[more]
A5BKJ0_VITVI	3.1e-09	47.56	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015612 PE=4 SV=1	[more]

BLAST of ClCG11G012370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147798966\|emb\|CAN68165.1\|	2.0e-09	32.39	hypothetical protein VITISV_008538 [Vitis vinifera]	[more]
gi\|147798966\|emb\|CAN68165.1\|	1.1e-02	37.66	hypothetical protein VITISV_008538 [Vitis vinifera]	[more]
gi\|147854383\|emb\|CAN81299.1\|	2.0e-09	32.39	hypothetical protein VITISV_006980 [Vitis vinifera]	[more]
gi\|147840966\|emb\|CAN66499.1\|	2.6e-09	32.39	hypothetical protein VITISV_010636 [Vitis vinifera]	[more]
gi\|147792395\|emb\|CAN70278.1\|	4.4e-09	47.56	hypothetical protein VITISV_015612 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0044464	cell part
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G012370.1	ClCG11G012370.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G012370	Cucurbita moschata (Rifu)	cmowcgB136
ClCG11G012370	Cucurbita moschata (Rifu)	cmowcgB696
ClCG11G012370	Wild cucumber (PI 183967)	cpiwcgB110
ClCG11G012370	Cucumber (Chinese Long) v2	cuwcgB103
ClCG11G012370	Melon (DHL92) v3.5.1	mewcgB367
ClCG11G012370	Watermelon (97103) v1	wcgwmB103
ClCG11G012370	Cucurbita pepo (Zucchini)	cpewcgB099
ClCG11G012370	Cucurbita pepo (Zucchini)	cpewcgB725
ClCG11G012370	Bottle gourd (USVL1VR-Ls)	lsiwcgB083
ClCG11G012370	Cucumber (Gy14) v2	cgybwcgB102
ClCG11G012370	Melon (DHL92) v3.6.1	medwcgB362
ClCG11G012370	Silver-seed gourd	carwcgB0060
ClCG11G012370	Cucumber (Chinese Long) v3	cucwcgB119
ClCG11G012370	Watermelon (97103) v2	wcgwmbB064
ClCG11G012370	Watermelon (97103) v2	wcgwmbB076
ClCG11G012370	Wax gourd	wcgwgoB142
ClCG11G012370	Cucumber (Gy14) v1	cgywcgB102
ClCG11G012370	Cucurbita maxima (Rimu)	cmawcgB046
ClCG11G012370	Cucurbita maxima (Rimu)	cmawcgB048
ClCG11G012370	Cucurbita maxima (Rimu)	cmawcgB149
ClCG11G012370	Cucurbita maxima (Rimu)	cmawcgB690