ClCG11G009860 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGCGTCAAGCCGCCACTGGCAACGTCTTGCTTCATGGAGGCTTGAGATGGTTGCTATCTGATACATATATTCCATAGGGTGGAGATTCTCACTCACTGGGAGATGACTCTGATGATGCTCAGAATCCTTCTCTCAGAAGAGCTCGAAGTGGAGGCTGGTTATGGTGAAGGAGAAAAAGTGCAGAGCTTTCGCCTCTTGAACTGGTCTCTCTCCCTTTTTAATGGGGAAGCTTTGGGCTATTTATAGGCGTCGAAAAGTTGAAACTCATGATGACCTGACACCTTTACATTAAATTCCATGCCCTGCTGCGCAGACTTTTTACGTCGTCGGCCCATTTGTTCTGCCATATTCTGATAGCGTGTTATCCTTTTGCATATTGATATGACAGCTTTTGGCCATGCGTCTGTATCTACTTTTTCTCAACGCATGGTCTCAACGCCTGGGCTCGACGCAGGTTTCCACTTATTCTCGCAGCAGCTTCGTTTCTTCGTGCTTCGCGCTTATTTTCTTCTTAACCCTGCGTTAGAAACATAAAAGCTCATCGTTTTTCAGGTATTTTCTTTTGTAAGTAATGCCAACGCATGGTGATACATTTTTCATCATTTAACTACCAAAATCATGCGTTTAGCTCCAAAGTTACTCTAATTAAATCAAATAGTGACTATTAATAACTTGTATTTCTACAAGTTATCAGTGACCTTTGACAGTAGGATCACACAAGTGCCGCGCGGTTGGTTAGGTTGAAACGCTAACCACGTGACAGGTGGTATCAGAGCACGATTCTTCTATCCTAGAAACCCGATACCAACGCATAGTTGCAAGTGAGATCGATGGCAGCCGAGGAAGCAAGAAGCTCATCGGTAAAGCGAGTGCAAGTTGAAGGACCAGTGACTTGAAGTAGGCGGCGAGATGGTGCTCGTCTGTCCAGCTTAGAAGAAGGATTAGAAGATGTGCAACTGGCCGTTGGTTGATTAAGTGAAAGATATGAAGAGCTCGTCTAAGAAAGCTTGGAGATCATGACAGTTGCCAAAGAGATGATCATAGAGCTGGGACGGACAACAGGAGAAGAGGTAAAATCCCTCACTCAAGAAGTAGCCAACCTAAGGAAGTTCGTGGAAGGGAAACTCCACGATCTTCACAAAGAGGTCGACGACATCCGAAAGGAGTTTCGGGCAAGTCGTGGTGCAAATGGTGAGGTGTCCACCAGCACCTCTGTCGTCGCGAGAGGCATGAATGGCTTAAAGATACCAAAGCCTGATACTTATGACGACACAAGAAGTACAATCATAGTGGATAACTTCTTGTTCGGTCTAAAGCAATATTTTGATGCCCTAAATGTCGTCGACGATGGCGCCAAGATAGCCAATGCGTCCAACTTCCTACGAGAGGCAGCCTAGTTATGGTGGCGTAGGAAGTATGCTGAGCGCGAGCGGGGCGAAAATTGCATCCAAACGTGGAGGCAATTCAAAGCGGAATTGCAAAAGCATTTTGTGCCCCACAATGCCGATGCGGAAACACGAGGAAAATTAAGGCTTAAGGCAGACCGGCAGTATTCCCGAGTACATTAAAGAATTTACAACCCTCATGCTGGAAATTGAAGGTTTATCTGACAAAGACGCACTCTTTTATTTCCGCGATGGTTTGAAGGATTGGGCGAAAATTGAGCTCGATAGGCGGGATGTGCACACGCTAGACGATGCGATAGCTGCTGCAGAGATGCTCACTGATTTCTCGTCCAAGACCAAGAAAGCCGCAAAGAAGGAAGAGGAAGTGTCAGAGTCGGATGAATCTGATGGGCATAAAACTGAGGGCATCCATAAGAATGGTCGATGGAACGGGAAGAAAAAGGATAGAGCTGCCGAGAAGATTGGAGGTAAGTCAGCCAGACGCCCTGTAACACCCCCACCCTAG ATGAAGAGCGTCAAGCCGCCACTGGCAACGGTGGAGATTCTCACTCACTGGGAGATGACTCTGATGATGCTCAGAATCCTTCTCTCAGAAGAGCTCGAAGTGGAGGCTGGTTATGGTGAAGGAGAAAAAACTTTTTACGTCGTCGGCCCATTTGTTCTGCCATATTCTGATAGCGTGGTATCAGAGCACGATTCTTCTATCCTAGAAACCCGATACCAACGCATAGTTGCAAGTGAGATCGATGGCAGCCGAGGAAGCAAGAAGCTCATCGGTAAAGCGAGTGCAAATGGTGCTCGTCTGTCCAGCTTAGAAGAAGGATTAGAAGATGTGCAACTGGCCGTTGAAAGCTTGGAGATCATGACAGTTGCCAAAGAGATGATCATAGAGCTGGGACGGACAACAGGAGAAGAGGTAAAATCCCTCACTCAAGAAGTAGCCAACCTAAGGAAGTTCGTGGAAGGGAAACTCCACGATCTTCACAAAGAGGTCGACGACATCCGAAAGGAGTTTCGGGCAAGTCGTGGTGCAAATGGTGAGGTGTCCACCAGCACCTCTGTCGTCGCGAGAGGCATGAATGGCTTAAAGATACCAAAGCCTGATACTTATGACGACACAAGAAGTACAATCATAGTGGATAACTTCTTGTTCGGTCTAAAGCAATATTTTGATGCCCTAAATGTCGTCGACGATGGCGCCAAGATAGCCAATGCGAAGTATGCTGAGCGCGAGCGGGGCGAAAATTGCATCCAAACGTGGAGGCAATTCAAAGCGGAATTGCAAAAGCATTTTGTGCCCCACAATGCCGATGCGGAAACACGAGGAAAATTAAGGCTTAAGGCAGACCGGCAGTATTCCCGAGATTGGGCGAAAATTGAGCTCGATAGGCGGGATGTGCACACGCTAGACGATGCGATAGCTGCTGCAGAGATGCTCACTGATTTCTCGTCCAAGACCAAGAAAGCCGCAAAGAAGGAAGAGGAAGTGTCAGAGTCGGATGAATCTGATGGGCATAAAACTGAGGGCATCCATAAGAATGGTCGATGGAACGGGAAGAAAAAGGATAGAGCTGCCGAGAAGATTGGAGGTAAGTCAGCCAGACGCCCTGTAACACCCCCACCCTAG ATGAAGAGCGTCAAGCCGCCACTGGCAACGGTGGAGATTCTCACTCACTGGGAGATGACTCTGATGATGCTCAGAATCCTTCTCTCAGAAGAGCTCGAAGTGGAGGCTGGTTATGGTGAAGGAGAAAAAACTTTTTACGTCGTCGGCCCATTTGTTCTGCCATATTCTGATAGCGTGGTATCAGAGCACGATTCTTCTATCCTAGAAACCCGATACCAACGCATAGTTGCAAGTGAGATCGATGGCAGCCGAGGAAGCAAGAAGCTCATCGGTAAAGCGAGTGCAAATGGTGCTCGTCTGTCCAGCTTAGAAGAAGGATTAGAAGATGTGCAACTGGCCGTTGAAAGCTTGGAGATCATGACAGTTGCCAAAGAGATGATCATAGAGCTGGGACGGACAACAGGAGAAGAGGTAAAATCCCTCACTCAAGAAGTAGCCAACCTAAGGAAGTTCGTGGAAGGGAAACTCCACGATCTTCACAAAGAGGTCGACGACATCCGAAAGGAGTTTCGGGCAAGTCGTGGTGCAAATGGTGAGGTGTCCACCAGCACCTCTGTCGTCGCGAGAGGCATGAATGGCTTAAAGATACCAAAGCCTGATACTTATGACGACACAAGAAGTACAATCATAGTGGATAACTTCTTGTTCGGTCTAAAGCAATATTTTGATGCCCTAAATGTCGTCGACGATGGCGCCAAGATAGCCAATGCGAAGTATGCTGAGCGCGAGCGGGGCGAAAATTGCATCCAAACGTGGAGGCAATTCAAAGCGGAATTGCAAAAGCATTTTGTGCCCCACAATGCCGATGCGGAAACACGAGGAAAATTAAGGCTTAAGGCAGACCGGCAGTATTCCCGAGATTGGGCGAAAATTGAGCTCGATAGGCGGGATGTGCACACGCTAGACGATGCGATAGCTGCTGCAGAGATGCTCACTGATTTCTCGTCCAAGACCAAGAAAGCCGCAAAGAAGGAAGAGGAAGTGTCAGAGTCGGATGAATCTGATGGGCATAAAACTGAGGGCATCCATAAGAATGGTCGATGGAACGGGAAGAAAAAGGATAGAGCTGCCGAGAAGATTGGAGGTAAGTCAGCCAGACGCCCTGTAACACCCCCACCCTAG MKSVKPPLATVEILTHWEMTLMMLRILLSEELEVEAGYGEGEKTFYVVGPFVLPYSDSVVSEHDSSILETRYQRIVASEIDGSRGSKKLIGKASANGARLSSLEEGLEDVQLAVESLEIMTVAKEMIIELGRTTGEEVKSLTQEVANLRKFVEGKLHDLHKEVDDIRKEFRASRGANGEVSTSTSVVARGMNGLKIPKPDTYDDTRSTIIVDNFLFGLKQYFDALNVVDDGAKIANAKYAERERGENCIQTWRQFKAELQKHFVPHNADAETRGKLRLKADRQYSRDWAKIELDRRDVHTLDDAIAAAEMLTDFSSKTKKAAKKEEEVSESDESDGHKTEGIHKNGRWNGKKKDRAAEKIGGKSARRPVTPPP
BLAST of ClCG11G009860 vs. TrEMBL
Match: A0A0D3AK41_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17 Identity = 90/323 (27.86%), Postives = 131/323 (40.56%), Query Frame = 1
BLAST of ClCG11G009860 vs. TrEMBL
Match: A5BT01_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020396 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14 Identity = 65/273 (23.81%), Postives = 121/273 (44.32%), Query Frame = 1
BLAST of ClCG11G009860 vs. TrEMBL
Match: A5BE62_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019815 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.6e-13 Identity = 66/297 (22.22%), Postives = 130/297 (43.77%), Query Frame = 1
BLAST of ClCG11G009860 vs. TrEMBL
Match: A5BF11_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001034 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.4e-11 Identity = 67/301 (22.26%), Postives = 135/301 (44.85%), Query Frame = 1
BLAST of ClCG11G009860 vs. TrEMBL
Match: A5BF11_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001034 PE=4 SV=1) HSP 1 Score: 34.7 bits (78), Expect = 3.0e+02 Identity = 25/84 (29.76%), Postives = 36/84 (42.86%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 9.1e-11 Identity = 72/252 (28.57%), Postives = 111/252 (44.05%), Query Frame = 1
BLAST of ClCG11G009860 vs. NCBI nr
Match: gi|659121350|ref|XP_008460615.1| (PREDICTED: uncharacterized protein LOC103499392 [Cucumis melo]) HSP 1 Score: 204.1 bits (518), Expect = 4.1e-49 Identity = 131/302 (43.38%), Postives = 175/302 (57.95%), Query Frame = 1
BLAST of ClCG11G009860 vs. NCBI nr
Match: gi|659068885|ref|XP_008446938.1| (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 3.0e-47 Identity = 132/336 (39.29%), Postives = 183/336 (54.46%), Query Frame = 1
BLAST of ClCG11G009860 vs. NCBI nr
Match: gi|802621793|ref|XP_012076137.1| (PREDICTED: uncharacterized protein LOC105637312 [Jatropha curcas]) HSP 1 Score: 161.0 bits (406), Expect = 4.0e-36 Identity = 102/266 (38.35%), Postives = 138/266 (51.88%), Query Frame = 1
BLAST of ClCG11G009860 vs. NCBI nr
Match: gi|985465103|ref|XP_015389228.1| (PREDICTED: uncharacterized protein LOC107178484 [Citrus sinensis]) HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34 Identity = 126/359 (35.10%), Postives = 171/359 (47.63%), Query Frame = 1
BLAST of ClCG11G009860 vs. NCBI nr
Match: gi|1000950906|ref|XP_015579415.1| (PREDICTED: uncharacterized protein LOC107261855 [Ricinus communis]) HSP 1 Score: 153.7 bits (387), Expect = 6.4e-34 Identity = 101/296 (34.12%), Postives = 157/296 (53.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |