ClCG11G008110 (gene) Watermelon (Charleston Gray)

NameClCG11G008110
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr11 : 11139358 .. 11141781 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGGGAGGAAAGGAGAGAAGAAATAGTTGGGTGCTTGGTTTTGAAGATGTGTTCTTCCTGCCTCATCTTTGGCATTCTAGTATCCGTTATTTGAATTCACATATCTGACAGGGAAATTTGGAGATTCATCCTTCTAGCATTTTTGTCAGGTTGGTCAATCTTTTCCCCAAATTCTAAATGTTATTTCCTCTAATTCTTCATCTGTTGATCTCATGGGGGAATTTGCTGATGCAATTTTCTTGCTTTCTGTAGTACGAATTGTTTGGTTTAATTAACCGAACGACCTTGGTGTTGGTTTCATTTCATTGTTTATTGGAATTCTGTTTAATGCGGTCGATATTTTGTTTCAGTTTCTTTTCTTTTTCTTTTCAAATCTTAGTTTGTTCTACTGTTTTGCTTCAGTTTCTGTCTTGTTTTCAAATCTTTGTGAATCTCATTTATTAACCGTAATTATATTATTAATTACGCCCATCTCCCTCACTATCCACCTTTTTTCTTTATAATTGCTATTCTGGATGACCCCTACAACTCTCCTCACCCCTTCCACGAACCATTACCGCTCTCTACTACGTCTCCCACCTTTGCTTCATCCTAGACCCACCAGCATTGCATGACATAGGCGGGGACAGGAAATCGAATGCTGTAGTAACATCCTCAAGAAGAAGGAAGAGAAAACGAGTCGATATTACTGACATCTTCGAGGTTGTTCTACAATATTCAAGAATGTGCTTCTAAAGTTGGTTTTACCCTGGGAGAGGGGTGAAGAAGAGGAGGGAACCAACAATATACAACTGGTGGTTGACGAACTTTGTAAGATGCAGGATTGCATCAATGATTGTCTTATAGGCAAGCCTACGCGACAGGAATATCCTTTAGAGGAAGGAAGAGGAAACAGGTCGTTAACTAACGCCGTTGAGAAGTTTTGATGTGAGATGAGAATCTATAACTTAGAGCTTCAAAGGATTGTGTCCTTGATTACTGGTGAGAAAGAGGAAGAGAGAAGGCCACTCGTAGGAAACGGTTGATGGACGAACTTCAGCAGATACTTGTTTTGAGCTCCAAGGATGGTCTTGAGCTTTTCCTAATGTTGTTTGACGATGTCCAAAAGACCAATTGCGTTCTTAGTTTACCGAAGAACAAGAAATATGAGTATTGCATGGATCTCTTAGGGAGGCGCAGCAGACCATGCATTGAGATTCCTATCACTTCATGCTCTTTTGTGTATGACTTGTATGAAGTTATGAATTATGAATTTGGTTATGACTTGCACGAATATCATTTGAGCGTAAATTATTAAAATCAATTGTTAATTGTCTTCTTCAATGTGTCAGATAATTATTTGTATTGATGCAGGTTATCAATGAACAACTAAAATAAATATAGAATCGAACCATTGATCCATTACGTTTAAAGAATTATGTTAATTGGAATTTATTTTTTACATTGGTGTACATAATTGTTTATGCTAAATGCGAATAATTTTAGAATCCAACAATTAGTTAATACCTTTAAAACTACTTAGAATCAAAATTTGAGAGTGGATGGAAATAAATATTTACTTCTCCAAATACTGACATTCTAAACATAGGCTTCCTAACCTACCAACATTAGAACATTTCTTAGAACATTTCATAGGCTTTGTAGAGTTTCCCCTAAATCCCACTTAGAGGTTTTCAATTTTTACTCTAATATCTCTTGTATGATTTTTTTTCTCTTCTTCTTTTGCCAATTTGAGGGAGGGAGATCGAATATTTGGCTTTGAGGTTGATAGTACATTCTTTATGCCAAAGCTATGACCATTTTGGTATGTCTTTTGTATGACTTGATCCATTTTGTCTTTCTTGCTACGAAATAGTTTAAGTTAAATAATACTTCATATTTTTATTTCATTAATTTTCTCAATAATCAATGAAAGAGGATTTGACAATTAGTTTGTTTATTTAAACTATCCTTCAAATCCTGTGAATGTAATGTACACATTCAGCTTGTACATATGGTAGGTAAAATTGACAAACAATAGAGCGTAAAGGTATCATCTTCCATTTAGTATTATTATGCTAATGGGCATTAAATTTCTGTTACTTTTGGTATATATGTTTATAACTTCAGAAGTAGATTCAAATTCAGCTTCTTATCAACAAATACAAAATATTTATATAATTAATGGATCTGGTTTATTAATTCCACATATGCTTCAATAATTGCCTTCAAGATGGTGAAAAGTCCTGTGTCTATCATTGTCTTTTGGCAATAATTGCCTTAATGTTGTTTTAGATTGATGTTCACTCATTAGCTGAACAACCAAACAAATTTATCTGCTTTGCTTGGCAGAACAACCGGGCGTTCTACAGGTTGTTCCAGACAGCCAGGTCGGGTTGCAACATTAGAGGATTTCGCAGCCTCCATTGAAGTCGGATGA

mRNA sequence

ATGGGTAGGGAGGAAAGGAGAGAAGAAATAGTTGGGTGCTTGGTTTTGAAGATGTGTTCTTCCTGCCTCATCTTTGGCATTCTAGTTGGTCAATCTTTTCCCCAAATTCTAAATGTTATTTCCTCTAATTCTTCATCTGTTGATCTCATGGGGGAATTTGCTGATGCAATTTTCTTGCTTTCTGTAGAAATCGAATGCTGTAGTAACATCCTCAAGAAGAAGGAAGAGAAAACGAAAGAGGAGGGAACCAACAATATACAACTGGTGGTTGACGAACTTTGTAAGATGCAGGATTGCATCAATGATTGTCTTATAGGCAAGCCTACGCGACAGGAATATCCTTTAGAGGAAGGAAGAGGAAACAGAGGAAGAGAGAAGGCCACTCGTAGGAAACGGTTGATGGACGAACTTCAGCAGATACTTGTTTTGAGCTCCAAGGATGGTCTTGAGCTTTTCCTAATGTTGTTTGACGATGTCCAAAAGACCAATTGCGTTCTTAGTTTACCGAAGAACAAGAAATATGAGTATTGCATGGATCTCTTAGGGAGGCGCAGCAGACCATGCATTGAGATTCCTATCACTTCATGCTCTTTTGTGTATGACTTGTATGAAGTTATGAATTATGAATTTGGTTATGACTTGCACGAATATCATTTGAGCCTGAACAACCAAACAAATTTATCTGCTTTGCTTGGCAGAACAACCGGGCGTTCTACAGGTTGTTCCAGACAGCCAGGTCGGGTTGCAACATTAGAGGATTTCGCAGCCTCCATTGAAGTCGGATGA

Coding sequence (CDS)

ATGGGTAGGGAGGAAAGGAGAGAAGAAATAGTTGGGTGCTTGGTTTTGAAGATGTGTTCTTCCTGCCTCATCTTTGGCATTCTAGTTGGTCAATCTTTTCCCCAAATTCTAAATGTTATTTCCTCTAATTCTTCATCTGTTGATCTCATGGGGGAATTTGCTGATGCAATTTTCTTGCTTTCTGTAGAAATCGAATGCTGTAGTAACATCCTCAAGAAGAAGGAAGAGAAAACGAAAGAGGAGGGAACCAACAATATACAACTGGTGGTTGACGAACTTTGTAAGATGCAGGATTGCATCAATGATTGTCTTATAGGCAAGCCTACGCGACAGGAATATCCTTTAGAGGAAGGAAGAGGAAACAGAGGAAGAGAGAAGGCCACTCGTAGGAAACGGTTGATGGACGAACTTCAGCAGATACTTGTTTTGAGCTCCAAGGATGGTCTTGAGCTTTTCCTAATGTTGTTTGACGATGTCCAAAAGACCAATTGCGTTCTTAGTTTACCGAAGAACAAGAAATATGAGTATTGCATGGATCTCTTAGGGAGGCGCAGCAGACCATGCATTGAGATTCCTATCACTTCATGCTCTTTTGTGTATGACTTGTATGAAGTTATGAATTATGAATTTGGTTATGACTTGCACGAATATCATTTGAGCCTGAACAACCAAACAAATTTATCTGCTTTGCTTGGCAGAACAACCGGGCGTTCTACAGGTTGTTCCAGACAGCCAGGTCGGGTTGCAACATTAGAGGATTTCGCAGCCTCCATTGAAGTCGGATGA

Protein sequence

MGREERREEIVGCLVLKMCSSCLIFGILVGQSFPQILNVISSNSSSVDLMGEFADAIFLLSVEIECCSNILKKKEEKTKEEGTNNIQLVVDELCKMQDCINDCLIGKPTRQEYPLEEGRGNRGREKATRRKRLMDELQQILVLSSKDGLELFLMLFDDVQKTNCVLSLPKNKKYEYCMDLLGRRSRPCIEIPITSCSFVYDLYEVMNYEFGYDLHEYHLSLNNQTNLSALLGRTTGRSTGCSRQPGRVATLEDFAASIEVG
BLAST of ClCG11G008110 vs. NCBI nr
Match: gi|449441756|ref|XP_004138648.1| (PREDICTED: subtilisin-like protease SBT3.5 isoform X1 [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 3.7e-12
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 1

Query: 114 PLEEGRGNRGREKATRRKRLMDELQQILVLSSKDGLELFLMLFDDVQKTNCVLSLPKNKK 173
           P +  R +R +E+  + K L+DEL  +  LSS + LE+FLMLFDDVQKT+C LS   NKK
Sbjct: 100 PDQVSRVSREKEEE-KDKSLVDELYGLPGLSSNNALEIFLMLFDDVQKTDCFLSFHMNKK 159

Query: 174 YEYCMDLLGRRS 186
           YEYCMDLLGRRS
Sbjct: 160 YEYCMDLLGRRS 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|449441756|ref|XP_004138648.1|3.7e-1259.72PREDICTED: subtilisin-like protease SBT3.5 isoform X1 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G008110.1ClCG11G008110.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG11G008110Lsi03G004570Bottle gourd (USVL1VR-Ls)lsiwcgB227
The following gene(s) are paralogous to this gene:

None