ClCG11G005140 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G005140
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	F-box and associated interaction domains-containing protein LENGTH=459
Location	CG_Chr11 : 5543716 .. 5544846 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGGTAATATTCTCCAAACTTACTATTTGCAATTTGCCCGTTTGTAGGCTGGTATGTAAAACTTGGAATCATCTAGTTTTAGATTACACTTCGTCTCTTAAATTTGTTCCGAATGTTTTCCTTGTTAGTACCTATGATATCCTCTTCAATCGCAATTGCAATTGTCATCCTCGTTGTTTTCCTTCTTTTAAGTGTAATCCCAAGATGCATTGTCTTGATATCGATACCATGAGTTACGTTGCCTCCTTTGTGTTTGACAACAATGATTGGCCTAAGATCCAAATTTTCAATTCCTGCAATGGATTGTTGTATATTTACAAATATAGTGACCATGACGGTTGTTGCAACGGCATATTAAATCTGATGACTAATGAGTTCTTCAAACTACCTCAACCTAAAGTAAAAAATAAGAATATTCATTGTGTCTACGGATTCGGTTTTAGTTGTAAGACGAAACAGTATAAATTGTTCAAAGCTATCCATGAACAAGGAGACTCTCATTCCATGATGGAGATTATGAGGTTTGGTAGGAATGAAACCAAGGAATGGAGACACTTTGATTGCATGCCTTTTGTGTTCTACTATCATGGTGCTTACCTGAATGGAGTTATATATTGGATCGGAAGAGAAAAAGAAAATAAGTTTGTGATTTACGGTCTTGATGTTGAAACTGAAAAAATTGAATCGATTACGGTTTTAGAAGTTGGCCTATACTCCTCCAATCATGGGTATATTGGGAAATTTAATGGCAGCCTTTATGCAACTATATCCATCCATGGAACATGTTGTAAGAAGGTTCAATTATGGATTATGCAAGGTAAAGATTCATGGATTAAAGAATGTGTTATATATGACATGTTAATTTATGGGATAGATGGATTTCTTCAGCTCATTAAGGTGTTTGAAGATGGAGAAAGATGGTTTCTTGTCCGTGATCAAATCTTTTGCTTCGATAAGACTGGGACGAAAATCAAGATAAAGAATTGGAACCGAAAGGATAGAGGTAAACAATTCATTGCAGGATTTTGTCAAATAGAATCCTTTAATTTTAGATCTCTCCAAAACATTTTGGCCGGAGAGGACATATGA

mRNA sequence

ATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGGTAATATTCTCCAAACTTACTATTTGCAATTTGCCCGTTTGTAGGCTGGTATGTAAAACTTGGAATCATCTAGTTTTAGATTACACTTCGTCTCTTAAATTTGTTCCGAATGTTTTCCTTGTTAGTACCTATGATATCCTCTTCAATCGCAATTGCAATTGTCATCCTCGTTGTTTTCCTTCTTTTAAGTGTAATCCCAAGATGCATTGTCTTGATATCGATACCATGAGTTACGTTGCCTCCTTTGTGTTTGACAACAATGATTGGCCTAAGATCCAAATTTTCAATTCCTGCAATGGATTGTTGTATATTTACAAATATAGTGACCATGACGGTTGTTGCAACGGCATATTAAATCTGATGACTAATGAGTTCTTCAAACTACCTCAACCTAAAGTAAAAAATAAGAATATTCATTGTGTCTACGGATTCGGTTTTAGTTGTAAGACGAAACAGTATAAATTGTTCAAAGCTATCCATGAACAAGGAGACTCTCATTCCATGATGGAGATTATGAGGTTTGGTAGGAATGAAACCAAGGAATGGAGACACTTTGATTGCATGCCTTTTGTGTTCTACTATCATGGTGCTTACCTGAATGGAGTTATATATTGGATCGGAAGAGAAAAAGAAAATAAGTTTGTGATTTACGGTCTTGATGTTGAAACTGAAAAAATTGAATCGATTACGGTTTTAGAAGTTGGCCTATACTCCTCCAATCATGGGTATATTGGGAAATTTAATGGCAGCCTTTATGCAACTATATCCATCCATGGAACATGTTGTAAGAAGGTTCAATTATGGATTATGCAAGGTAAAGATTCATGGATTAAAGAATGTGTTATATATGACATGTTAATTTATGGGATAGATGGATTTCTTCAGCTCATTAAGGTGTTTGAAGATGGAGAAAGATGGTTTCTTGTCCGTGATCAAATCTTTTGCTTCGATAAGACTGGGACGAAAATCAAGATAAAGAATTGGAACCGAAAGGATAGAGGTAAACAATTCATTGCAGGATTTTGTCAAATAGAATCCTTTAATTTTAGATCTCTCCAAAACATTTTGGCCGGAGAGGACATATGA

Coding sequence (CDS)

ATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGGTAATATTCTCCAAACTTACTATTTGCAATTTGCCCGTTTGTAGGCTGGTATGTAAAACTTGGAATCATCTAGTTTTAGATTACACTTCGTCTCTTAAATTTGTTCCGAATGTTTTCCTTGTTAGTACCTATGATATCCTCTTCAATCGCAATTGCAATTGTCATCCTCGTTGTTTTCCTTCTTTTAAGTGTAATCCCAAGATGCATTGTCTTGATATCGATACCATGAGTTACGTTGCCTCCTTTGTGTTTGACAACAATGATTGGCCTAAGATCCAAATTTTCAATTCCTGCAATGGATTGTTGTATATTTACAAATATAGTGACCATGACGGTTGTTGCAACGGCATATTAAATCTGATGACTAATGAGTTCTTCAAACTACCTCAACCTAAAGTAAAAAATAAGAATATTCATTGTGTCTACGGATTCGGTTTTAGTTGTAAGACGAAACAGTATAAATTGTTCAAAGCTATCCATGAACAAGGAGACTCTCATTCCATGATGGAGATTATGAGGTTTGGTAGGAATGAAACCAAGGAATGGAGACACTTTGATTGCATGCCTTTTGTGTTCTACTATCATGGTGCTTACCTGAATGGAGTTATATATTGGATCGGAAGAGAAAAAGAAAATAAGTTTGTGATTTACGGTCTTGATGTTGAAACTGAAAAAATTGAATCGATTACGGTTTTAGAAGTTGGCCTATACTCCTCCAATCATGGGTATATTGGGAAATTTAATGGCAGCCTTTATGCAACTATATCCATCCATGGAACATGTTGTAAGAAGGTTCAATTATGGATTATGCAAGGTAAAGATTCATGGATTAAAGAATGTGTTATATATGACATGTTAATTTATGGGATAGATGGATTTCTTCAGCTCATTAAGGTGTTTGAAGATGGAGAAAGATGGTTTCTTGTCCGTGATCAAATCTTTTGCTTCGATAAGACTGGGACGAAAATCAAGATAAAGAATTGGAACCGAAAGGATAGAGGTAAACAATTCATTGCAGGATTTTGTCAAATAGAATCCTTTAATTTTAGATCTCTCCAAAACATTTTGGCCGGAGAGGACATATGA

Protein sequence

MNINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSLKFVPNVFLVSTYDILFNRNCNCHPRCFPSFKCNPKMHCLDIDTMSYVASFVFDNNDWPKIQIFNSCNGLLYIYKYSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIHEQGDSHSMMEIMRFGRNETKEWRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVETEKIESITVLEVGLYSSNHGYIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGERWFLVRDQIFCFDKTGTKIKIKNWNRKDRGKQFIAGFCQIESFNFRSLQNILAGEDI

Homology

[Close]

BLAST of ClCG11G005140 vs. TrEMBL
Match: A0A0A0KSJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 2.0e-138
Identity = 249/384 (64.84%), Postives = 303/384 (78.91%), Query Frame = 1


Query: 2   NINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSLKFVPNVFLVSTYDI 61
           NIN G  +PPNVV+VI  KLTI +LP CRLV +TWNHL+L+Y SS KF+PN+FL ++Y+I
Sbjct: 9   NINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIPNLFLAASYEI 68

Query: 62  LFNRNCNCHPRCFPSFKCNPKMHCLDID-TMSYVASFVFDNNDWP-KIQIFNSCNGLLYI 121
            ++RNCNC+P C P+FKCNPKM+C+DI+ T + +ASFVFDNNDWP KI+I NSCNGLLYI
Sbjct: 69  HYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYI 128

Query: 122 YKYSDHDGCCNGILNLMTNEFFKL-PQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIHEQG 181
           +K  D +  CNGILN MTNEFF L  QPKVKN++I C YGFGF+ KTKQYKLFKAIH++ 
Sbjct: 129 HKVGD-ENFCNGILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAIHDEE 188

Query: 182 DSHSMMEIMRFGRN-ETKEWRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVE 241
           DSH MME+MRFG+N ETKEWRH  C+PFVFY  G YLNGVIYWIGR+KENK VIY L+VE
Sbjct: 189 DSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVE 248

Query: 242 TEKIESITVLEV--GLYSSNHG-YIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKE 301
           TEKIESITVL+V     +S++G YIGK+NG+LYATI IHGTCCKKVQLW+MQGKD W+KE
Sbjct: 249 TEKIESITVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKE 308

Query: 302 CVIYDMLIYGIDGFLQLIKVFEDGERWFLVRDQ-IFCFDKTGTKIKIK-NWNRKDRGKQF 361
            V++D+    +D FL L+K+FEDGERWF V  + I C+DKTGT+IK K    R   G+  
Sbjct: 309 FVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGN 368

Query: 362 IAG-FCQIESFNFRSLQNILAGED 376
           + G  C  +S NF SL NIL G +
Sbjct: 369 LVGQLCHFDSLNFGSLPNILDGHN 391

[Close]

BLAST of ClCG11G005140 vs. TrEMBL
Match: A0A0A0KUJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 160/302 (52.98%), Postives = 207/302 (68.54%), Query Frame = 1


Query: 78  KCNPKMHCLDIDTMSYVASFVF-DNNDWPKIQIFNSCNGLLYIYKYSDHDGCCNGILNLM 137
           +CN K+HC+DIDTMS V SF F D+++   + I +SC+ LL I K  D D  C GILN M
Sbjct: 4   ECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGILNPM 63

Query: 138 TNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIH-EQGDSHSMMEIMRFG-RNET 197
           TNEF +LP  +    + +  YGFGF+ KTKQYKLF+    ++ + +S+MEIMRFG R+ET
Sbjct: 64  TNEFLELPDREYDESSPY--YGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSET 123

Query: 198 KE-WRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVETEKIESITVLEVGLYS 257
           KE WRHF C P  F  HGAYLNGVIYW+G+EK   +VIY LDVETE++E +  LEVG ++
Sbjct: 124 KEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHN 183

Query: 258 SNH-GYIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLI 317
             + GYI   N S+YA + I G CC K+Q+W MQGK+ WI+E V+YD +  G+   +Q++
Sbjct: 184 FRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPMQMV 243

Query: 318 KVFEDGERWFLVRDQIFCFDKTGTKIKIKN-WNRKDRGKQFIAGFCQIESFNFRSLQNIL 374
           KV +DGERWF V   I C DKTG  IKI++ WN K   +    G CQIES NF S+QNIL
Sbjct: 244 KVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETR--FDGLCQIESLNFGSIQNIL 301

[Close]

BLAST of ClCG11G005140 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.3e-69
Identity = 175/414 (42.27%), Postives = 232/414 (56.04%), Query Frame = 1


Query: 1   MNINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSS--LKFVPNVFLVST 60
           M IN G G+PP + K IFSKL I +LP CRLV  TWN LVLDY SS  L+F+ N FL+ST
Sbjct: 18  MTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLST 77

Query: 61  YDILFNRNCNCHPRCFPSFKCNPKMHCLDIDTMSYVASFVFD-------------NNDWP 120
            D   N              CNPKMHC+++DT      F FD             + DW 
Sbjct: 78  SDRGLNYKL-----------CNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWT 137

Query: 121 -KIQIFNSCNGLLYIYKYSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCK 180
             I +  SCNGL+ I K SD+   C GI N MTNEF ++ +    +     +YGFGFS  
Sbjct: 138 YTIIMAGSCNGLMLISKCSDYT-WCQGIFNPMTNEFLQVSEHGTFDD--FYLYGFGFSPI 197

Query: 181 TKQYKLFKAIHEQG----------DSHSMMEIMRFGRNET-------KEWRHFDCMPFVF 240
           TKQYKLF+ + ++G          D+H  ME++ FGR+ T        +WR    +PF  
Sbjct: 198 TKQYKLFR-VFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEI 257

Query: 241 YYHGAYLNGVIYWI----GREKENKFVIYGLDVETEKIESITVLEVGLYSSNHGYIGKFN 300
              G YLNG+IYW+    G++KE K+VIY LDVETE IE   VL+V   S+ +G I +FN
Sbjct: 258 VADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVP--SNGYGKIHQFN 317

Query: 301 GSLYATISIH-GTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGERWF 360
           G++YAT  I+     + +Q+W MQ KDSW+++ VI D+    I   LQLIK+FED E  F
Sbjct: 318 GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWI--HLQLIKMFEDEEILF 377

Query: 361 LVRDQIFCFDKTGTKIKIKNWNRKDRGKQFIAGFCQIESFNFRSLQNILAGEDI 377
           ++    FCF    +K K +  ++  + K++I   CQIES NF  L  IL G  I
Sbjct: 378 MINMDFFCFYNPSSK-KKRIISKNQKKKRYI---CQIESLNFGRLSQILEGTQI 408

[Close]

BLAST of ClCG11G005140 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.1e-67
Identity = 169/417 (40.53%), Postives = 227/417 (54.44%), Query Frame = 1


Query: 1   MNINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSS--LKFVPNVFLVST 60
           M+I+WG G+PP + K IFSKL I NLP CR VCKTWNHLVL Y SS  L+F+ N FL+ST
Sbjct: 34  MSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLST 93

Query: 61  YDILFNRNCNCHPRCFPSFKCNPKMHCLDIDTMSYVASFVFD-------------NNDWP 120
            D + N              CNPKMHC+++D         FD               DW 
Sbjct: 94  SDRMLNYEL-----------CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQFYGDWT 153

Query: 121 -KIQIFNSCNGLLYIYKYSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCK 180
             I + + CNGL++I K SD+   C GI N MTNEFF++ +    +   H  YGFG S  
Sbjct: 154 FMILLAHPCNGLMFISKCSDYT-WCQGIFNPMTNEFFQVSEQDTFDDFYH--YGFGLSAI 213

Query: 181 TKQYKLFKAIHE--------------QGDSHSMMEIMRFGRNET------KEWRHFDCMP 240
           +KQYKLF+                  + D+H  ME++ FGR+ T       +WRH   + 
Sbjct: 214 SKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLS 273

Query: 241 FVFYYHGAYLNGVIYWIGREKENK----FVIYGLDVETEKIESITVLEVGLYSSNHGYIG 300
                HG YLNG+IYW+G+EK  K    +VIY LDVETE+IE   +L+V    ++ G + 
Sbjct: 274 -CDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQV---QASDGKMH 333

Query: 301 KFNGSLYATISIH-GTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGE 360
            FNG++YA   I+     + +Q+W MQ K SWI++ VI D  I    G L+LIK+FEDGE
Sbjct: 334 PFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQFVIRD--ISKEWGCLELIKIFEDGE 393

Query: 361 RWFLVRDQIFCFDKTGTKIKIKNWNRKDRGKQFIAGFCQIESFNFRSLQNILAGEDI 377
             FL+    FCF    T+ K +  ++  +  +F+   CQIE  NF SL  IL G  +
Sbjct: 394 ILFLIDSDFFCFYHPLTE-KKRIISKNQKKNRFV---CQIECLNFGSLPEILEGTSL 426

[Close]

BLAST of ClCG11G005140 vs. TrEMBL
Match: A0A0A0LSE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.4e-56
Identity = 155/407 (38.08%), Postives = 217/407 (53.32%), Query Frame = 1


Query: 4   NWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSL-KFVPNVFLVSTYDIL 63
           +W  G+P ++ K IFSKL + NLP CR+VCK WN L+LD+ SS  KF+ N F++ T D+L
Sbjct: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCDVL 64

Query: 64  FNRNCNCHPRCFPSFKCNPKMHCLDIDTM----------------SYVASFVFDNNDWPK 123
                  HP   P    NP MHCL  D +                S+ A  V+       
Sbjct: 65  -------HPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVY------- 124

Query: 124 IQIFNSCNGLLYIYK----YSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFS 183
            ++ NSCNGLL IYK    +        GI N MTNEFF++P  ++    +   YGFGF 
Sbjct: 125 -KLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEI----VEYHYGFGFI 184

Query: 184 CKTKQYKLFKAIH------EQGDSHSMMEIMRFGRNE-----TKEWRHFDCMPFVFYYHG 243
             TKQYKLF+         E+ +S S ++++ FGR+E       +WR    +P     HG
Sbjct: 185 PATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHG 244

Query: 244 AYLNGVIYWIGREKE-NKFVIYGLDVETEKIESITVLEVGLYSSNHGYIGKFNGSLYATI 303
           A++NGVIYW+G  KE N++V+Y LDVETEKI+   VLEV   +     I +FNG++YA  
Sbjct: 245 AHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYAVF 304

Query: 304 SIHGTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGERWFLVRDQIFC 363
            +     +  Q+W MQ K+SWI++ VI D         L L+K +E+GE   +V+  +F 
Sbjct: 305 HME----EATQVWRMQEKNSWIRDFVIDDC-------NLTLVKAYENGEMLCMVKPTVFW 364

Query: 364 F--DKTGTKIKIKNWNRKDRGKQFIAGFCQIESFNFRSLQNILAGED 376
                TG+K  +   N     K+   G C +E  NF SL NILAG++
Sbjct: 365 LYNPSTGSKKVLSLRNE----KKIFLGICHLE-LNFGSLLNILAGDE 374

[Close]

BLAST of ClCG11G005140 vs. TAIR10
Match: AT5G15660.1 (AT5G15660.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 52.0 bits (123), Expect = 9.4e-07
Identity = 44/191 (23.04%), Postives = 91/191 (47.64%), Query Frame = 1


Query: 80  NPKMHCL--DIDTMSYVASFVFDNNDWPKIQ--IFNSCNGLLYIYKYSDHDGCCNGILNL 139
           NPK+H     I + S+++S       +P+ +   ++  NGL+ +   +D       ++N 
Sbjct: 90  NPKLHFFRPSISSPSFLSSLTCPFT-YPRHEEYYYHHVNGLISVGYGTDQI-----VINP 149

Query: 140 MTNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLF----KAIHEQGDSHSMMEIMRFGR 199
            T +F  LP+PK + K +  +  FG+   + QYK+     +      ++ S  ++   G 
Sbjct: 150 TTGKFITLPRPKTRRKLV--ISFFGYDSVSDQYKVLCMTERLRGHPEEASSQHQVYTLGA 209

Query: 200 NETKEWRHFDC-MPF-VFYYHGAYLNGVIYWIGREKENKF--VIYGLDVETEKIESITVL 259
            + K W+  +C +P   + ++   +NGV+Y+I +  E  F   +   D++++ ++  T+L
Sbjct: 210 KQ-KSWKMINCSIPHRPWSWNAVCINGVVYYIAKTGEGMFRRCLMRFDLKSDNLDLCTIL 269

[Close]

BLAST of ClCG11G005140 vs. NCBI nr
Match: gi|449447693|ref|XP_004141602.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 2.8e-138
Identity = 249/384 (64.84%), Postives = 303/384 (78.91%), Query Frame = 1


Query: 2   NINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSLKFVPNVFLVSTYDI 61
           NIN G  +PPNVV+VI  KLTI +LP CRLV +TWNHL+L+Y SS KF+PN+FL ++Y+I
Sbjct: 9   NINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIPNLFLAASYEI 68

Query: 62  LFNRNCNCHPRCFPSFKCNPKMHCLDID-TMSYVASFVFDNNDWP-KIQIFNSCNGLLYI 121
            ++RNCNC+P C P+FKCNPKM+C+DI+ T + +ASFVFDNNDWP KI+I NSCNGLLYI
Sbjct: 69  HYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYI 128

Query: 122 YKYSDHDGCCNGILNLMTNEFFKL-PQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIHEQG 181
           +K  D +  CNGILN MTNEFF L  QPKVKN++I C YGFGF+ KTKQYKLFKAIH++ 
Sbjct: 129 HKVGD-ENFCNGILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAIHDEE 188

Query: 182 DSHSMMEIMRFGRN-ETKEWRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVE 241
           DSH MME+MRFG+N ETKEWRH  C+PFVFY  G YLNGVIYWIGR+KENK VIY L+VE
Sbjct: 189 DSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVE 248

Query: 242 TEKIESITVLEV--GLYSSNHG-YIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKE 301
           TEKIESITVL+V     +S++G YIGK+NG+LYATI IHGTCCKKVQLW+MQGKD W+KE
Sbjct: 249 TEKIESITVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKE 308

Query: 302 CVIYDMLIYGIDGFLQLIKVFEDGERWFLVRDQ-IFCFDKTGTKIKIK-NWNRKDRGKQF 361
            V++D+    +D FL L+K+FEDGERWF V  + I C+DKTGT+IK K    R   G+  
Sbjct: 309 FVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGN 368

Query: 362 IAG-FCQIESFNFRSLQNILAGED 376
           + G  C  +S NF SL NIL G +
Sbjct: 369 LVGQLCHFDSLNFGSLPNILDGHN 391

[Close]

BLAST of ClCG11G005140 vs. NCBI nr
Match: gi|659119531|ref|XP_008459706.1| (PREDICTED: uncharacterized protein LOC103498748 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 3.0e-100
Identity = 204/375 (54.40%), Postives = 253/375 (67.47%), Query Frame = 1


Query: 6   GPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSLKFVPNVFLVSTYDIL-FN 65
           G  +P NVVK IFSKL   NLP  RLVCKTWN  V++Y SS KF PNVF + T DI   N
Sbjct: 17  GMRLPFNVVKEIFSKLAFSNLPAYRLVCKTWNDFVINYASSYKFFPNVFFLCTSDIRPSN 76

Query: 66  RNCNCHPRCFPSFKCNPKMHCLDIDTMSYVASFVF-DNNDWPKIQIFNSCNGLLYIYKYS 125
            +CNC+  C  + +CN K+H +DIDTM+ VASF F D+ +   + I +SC  LL I K  
Sbjct: 77  CSCNCNSSCGSTRECNFKIHYIDIDTMNCVASFGFEDDYNHSNVSIVSSCKALLLISKLI 136

Query: 126 DHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIHEQG-DSHS 185
           + D  C GILN MTNEFF+LP+ +      H  YGFGFS KTKQYKLF+  ++   + + 
Sbjct: 137 NSDNLCEGILNPMTNEFFELPECEFDES--HPFYGFGFSLKTKQYKLFRVTYDDRYELYC 196

Query: 186 MMEIMRFG-RNETKE-WRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVETEK 245
           +MEIMRFG R+ TKE WRHF C P  F  HGAYLNGVIYW+G+E+  + VIY LDVETE+
Sbjct: 197 IMEIMRFGDRSGTKEEWRHFKCPPISFDNHGAYLNGVIYWVGKEEGKEHVIYALDVETEQ 256

Query: 246 IESITVLEVGLYSSNH-GYIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKECVIYD 305
           IES+ VLEVG +S  + GYI   N S+YA + I GTCC +VQ+W MQ K SWI+E V++D
Sbjct: 257 IESVAVLEVGPHSFRYNGYITTLNNSVYAHVLIIGTCCTRVQVWTMQEKKSWIREFVMHD 316

Query: 306 MLIYGIDGFLQLIKVFEDGERWFLVRDQIFCFDKTGTKIKIKN-WNRKDRGKQFIAGFCQ 365
            +   +   +QL+KV +DGERWF V   IFC DKTG  IKIK+ WN K   +    G CQ
Sbjct: 317 EIPKSLIMPMQLVKVLKDGERWFFVDGNIFCCDKTGMNIKIKSLWNSKIETR--FDGLCQ 376

Query: 366 IESFNFRSLQNILAG 374
           IES NF S+QNILAG
Sbjct: 377 IESLNFGSIQNILAG 387

[Close]

BLAST of ClCG11G005140 vs. NCBI nr
Match: gi|659119533|ref|XP_008459707.1| (PREDICTED: putative F-box protein At1g55070 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 5.1e-79
Identity = 189/388 (48.71%), Postives = 243/388 (62.63%), Query Frame = 1


Query: 1   MNINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSLKFVPNVFL-VSTY 60
           MNIN    +PP++V+ IFSKL+I NLP CR+VCKTWN+LVL+Y SS KF+P   L +S  
Sbjct: 12  MNINLR--LPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFLPTTTLFLSMA 71

Query: 61  DILFNRNCNCHPRCFPSFK----CNPKMHCLDIDT-MSYVASFVFDNNDWPKIQIFNSCN 120
           D + N         +  FK    CNPK+HC+DID+  SYVASF F+  DW  I I NSCN
Sbjct: 72  DEISN---------YIPFKSTPWCNPKIHCVDIDSKTSYVASFGFE-GDWSYITIVNSCN 131

Query: 121 GLLYIYKYSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLFKAI 180
           GLLYI K++  D  C GILN MTNEF ++PQP+++  ++H + GFGFS +TKQYKLF+  
Sbjct: 132 GLLYICKFT-FDSLCEGILNPMTNEFMEIPQPEIE-LDVHSI-GFGFSPRTKQYKLFRTE 191

Query: 181 HEQGDS----HSMMEIMRFGRNETKEWRHFDCMPFVFYYHGAYLNGVIYWIGR--EKENK 240
            E  ++    H +MEI  F  N  K+WRHF+ +PFV ++HG YLNGVIYWIG+  EKE +
Sbjct: 192 PEVLENLKKCHYIMEIFTFD-NGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGE 251

Query: 241 FVIYGLDVETEKIESITVLEVGLYSSNHGYIGKFNGSLYATISIH----GTCCKKVQLWI 300
            VIY LDV+TE++E    LE+G  S  +G I  F   +YA IS+          K++LW 
Sbjct: 252 AVIYALDVDTEQMECTATLEIG-PSLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWR 311

Query: 301 MQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGERWFLVRDQIFCFDKTGTKIKIKNWN 360
           MQ KDSWIKE  I D   +G      LI VFEDGE    ++D IF  DK+  KIKIK  N
Sbjct: 312 MQKKDSWIKEFSI-DEESFG------LITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLN 371

Query: 361 RKDRGKQFIAGFCQIESFNFRSLQNILA 373
             +  +  + G   I S NF    NILA
Sbjct: 372 SSE-SRIKVIGCNTINSINFECFSNILA 374

[Close]

BLAST of ClCG11G005140 vs. NCBI nr
Match: gi|449447691|ref|XP_004141601.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 1.9e-78
Identity = 160/302 (52.98%), Postives = 207/302 (68.54%), Query Frame = 1


Query: 78  KCNPKMHCLDIDTMSYVASFVF-DNNDWPKIQIFNSCNGLLYIYKYSDHDGCCNGILNLM 137
           +CN K+HC+DIDTMS V SF F D+++   + I +SC+ LL I K  D D  C GILN M
Sbjct: 4   ECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGILNPM 63

Query: 138 TNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIH-EQGDSHSMMEIMRFG-RNET 197
           TNEF +LP  +    + +  YGFGF+ KTKQYKLF+    ++ + +S+MEIMRFG R+ET
Sbjct: 64  TNEFLELPDREYDESSPY--YGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSET 123

Query: 198 KE-WRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVETEKIESITVLEVGLYS 257
           KE WRHF C P  F  HGAYLNGVIYW+G+EK   +VIY LDVETE++E +  LEVG ++
Sbjct: 124 KEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHN 183

Query: 258 SNH-GYIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLI 317
             + GYI   N S+YA + I G CC K+Q+W MQGK+ WI+E V+YD +  G+   +Q++
Sbjct: 184 FRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPMQMV 243

Query: 318 KVFEDGERWFLVRDQIFCFDKTGTKIKIKN-WNRKDRGKQFIAGFCQIESFNFRSLQNIL 374
           KV +DGERWF V   I C DKTG  IKI++ WN K   +    G CQIES NF S+QNIL
Sbjct: 244 KVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETR--FDGLCQIESLNFGSIQNIL 301

[Close]

BLAST of ClCG11G005140 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 4.7e-69
Identity = 175/414 (42.27%), Postives = 232/414 (56.04%), Query Frame = 1


Query: 1   MNINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSS--LKFVPNVFLVST 60
           M IN G G+PP + K IFSKL I +LP CRLV  TWN LVLDY SS  L+F+ N FL+ST
Sbjct: 18  MTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLST 77

Query: 61  YDILFNRNCNCHPRCFPSFKCNPKMHCLDIDTMSYVASFVFD-------------NNDWP 120
            D   N              CNPKMHC+++DT      F FD             + DW 
Sbjct: 78  SDRGLNYKL-----------CNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWT 137

Query: 121 -KIQIFNSCNGLLYIYKYSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCK 180
             I +  SCNGL+ I K SD+   C GI N MTNEF ++ +    +     +YGFGFS  
Sbjct: 138 YTIIMAGSCNGLMLISKCSDYT-WCQGIFNPMTNEFLQVSEHGTFDD--FYLYGFGFSPI 197

Query: 181 TKQYKLFKAIHEQG----------DSHSMMEIMRFGRNET-------KEWRHFDCMPFVF 240
           TKQYKLF+ + ++G          D+H  ME++ FGR+ T        +WR    +PF  
Sbjct: 198 TKQYKLFR-VFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEI 257

Query: 241 YYHGAYLNGVIYWI----GREKENKFVIYGLDVETEKIESITVLEVGLYSSNHGYIGKFN 300
              G YLNG+IYW+    G++KE K+VIY LDVETE IE   VL+V   S+ +G I +FN
Sbjct: 258 VADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVP--SNGYGKIHQFN 317

Query: 301 GSLYATISIH-GTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGERWF 360
           G++YAT  I+     + +Q+W MQ KDSW+++ VI D+    I   LQLIK+FED E  F
Sbjct: 318 GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWI--HLQLIKMFEDEEILF 377

Query: 361 LVRDQIFCFDKTGTKIKIKNWNRKDRGKQFIAGFCQIESFNFRSLQNILAGEDI 377
           ++    FCF    +K K +  ++  + K++I   CQIES NF  L  IL G  I
Sbjct: 378 MINMDFFCFYNPSSK-KKRIISKNQKKKRYI---CQIESLNFGRLSQILEGTQI 408

The following BLAST results are available for this feature:

BLAST of ClCG11G005140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSJ2_CUCSA	2.0e-138	64.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1	[more]
A0A0A0KUJ1_CUCSA	1.3e-78	52.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1	[more]
A0A0A0LWG1_CUCSA	3.3e-69	42.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1	[more]
A0A0A0LPC6_CUCSA	3.1e-67	40.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1	[more]
A0A0A0LSE0_CUCSA	1.4e-56	38.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1	[more]

BLAST of ClCG11G005140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15660.1	9.4e-07	23.04	F-box and associated interaction domains-containing protein	[more]

BLAST of ClCG11G005140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447693\|ref\|XP_004141602.1\|	2.8e-138	64.84	PREDICTED: F-box protein At3g07870-like [Cucumis sativus]	[more]
gi\|659119531\|ref\|XP_008459706.1\|	3.0e-100	54.40	PREDICTED: uncharacterized protein LOC103498748 [Cucumis melo]	[more]
gi\|659119533\|ref\|XP_008459707.1\|	5.1e-79	48.71	PREDICTED: putative F-box protein At1g55070 [Cucumis melo]	[more]
gi\|449447691\|ref\|XP_004141601.1\|	1.9e-78	52.98	PREDICTED: F-box protein At3g07870-like [Cucumis sativus]	[more]
gi\|700210076\|gb\|KGN65172.1\|	4.7e-69	42.27	hypothetical protein Csa_1G257290 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G005140.1	ClCG11G005140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 9..41 score: 2.
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 9..49 score: 0.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 9..74 score: 1.9
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 212..322 score: 1.
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 111..298 score: 1.8
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 10..42 score: 5.
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 29..374 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G005140	Csa5G643280	Cucumber (Chinese Long) v2	cuwcgB353
ClCG11G005140	Cla97C11G212030	Watermelon (97103) v2	wcgwmbB065
ClCG11G005140	CSPI05G29780	Wild cucumber (PI 183967)	cpiwcgB370
ClCG11G005140	Cucsa.238310	Cucumber (Gy14) v1	cgywcgB416
ClCG11G005140	Lsi03G002090	Bottle gourd (USVL1VR-Ls)	lsiwcgB226
ClCG11G005140	CsaV3_5G038900	Cucumber (Chinese Long) v3	cucwcgB376

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G005140	Melon (DHL92) v3.6.1	medwcgB007
ClCG11G005140	Melon (DHL92) v3.6.1	medwcgB008
ClCG11G005140	Melon (DHL92) v3.6.1	medwcgB049
ClCG11G005140	Silver-seed gourd	carwcgB0019
ClCG11G005140	Silver-seed gourd	carwcgB0255
ClCG11G005140	Cucumber (Chinese Long) v3	cucwcgB380
ClCG11G005140	Watermelon (97103) v2	wcgwmbB074
ClCG11G005140	Wax gourd	wcgwgoB145
ClCG11G005140	Wax gourd	wcgwgoB178
ClCG11G005140	Watermelon (Charleston Gray)	wcgwcgB070
ClCG11G005140	Cucumber (Gy14) v1	cgywcgB491
ClCG11G005140	Cucurbita maxima (Rimu)	cmawcgB252
ClCG11G005140	Cucurbita maxima (Rimu)	cmawcgB619
ClCG11G005140	Cucurbita moschata (Rifu)	cmowcgB240
ClCG11G005140	Cucurbita moschata (Rifu)	cmowcgB621
ClCG11G005140	Wild cucumber (PI 183967)	cpiwcgB372
ClCG11G005140	Cucumber (Chinese Long) v2	cuwcgB355
ClCG11G005140	Melon (DHL92) v3.5.1	mewcgB008
ClCG11G005140	Melon (DHL92) v3.5.1	mewcgB009
ClCG11G005140	Melon (DHL92) v3.5.1	mewcgB049
ClCG11G005140	Watermelon (97103) v1	wcgwmB096
ClCG11G005140	Watermelon (97103) v1	wcgwmB107
ClCG11G005140	Cucurbita pepo (Zucchini)	cpewcgB159
ClCG11G005140	Cucurbita pepo (Zucchini)	cpewcgB355
ClCG11G005140	Bottle gourd (USVL1VR-Ls)	lsiwcgB267
ClCG11G005140	Cucumber (Gy14) v2	cgybwcgB328