ClCG11G004750 (gene) Watermelon (Charleston Gray)

Overview
NameClCG11G004750
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionF-box family protein
LocationCG_Chr11 : 5092707 .. 5093822 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGATGGAAAGTAAGATGGTTATGAAAAAAAATGGAGGGCTAATTCCACCGCATATTCTTCAGGTAATCTTCTCCAACCTTCCTATCTCTAATTTGCCCACTTGCCGGCTCGTCGGTAAAACTTGGAATGATTTGGTTCTCGATTACGCTTCGTCTTGTAAATCCCTTCCACAAACTTTCTTTCTATTTACCTCTGAAAGAATAATCCCCGATGCTAATCATTCTTATCGTCTTCGTTATTGCAATCCTAAGATCCATTGTATCTCTACCAATACCATGGGTTCCGTTGCCTCATTTGGGATTGATAGTGATTCTTCGAAGATCTTTATTTTCAATCACTGCAATGGCCTTATGTTTATTACCAAACATACTAATGGTGGTCGTTGTGACGGCATATTAAATCCAATGACTAATGAGTTCTTCAAACTTCCTGGACCGGAAATAGATGATTTCTACACTATCGGATTTGGTTTCAGCCCTAACACGAATCAGTACAAATTGTTCAAAGTTCGTTTTCGTCCATTAGAATCGAGTTGTGTGATGGAGGTTTTTAGGTTGGGTAGAAATGGAACCAACCAATGGAACCATTTTAAGTGTCTGCCTTTCAACATCCACTATCATGGTGCTTATTTGAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGGAAACAACTTTGCTATATATGCTCTTGACGTTGAAACTGAAAAAATTGATCGGATTGTGACTTCATTGGAAGTTGGCCCTTATGAACACTCTAGGGAAGTCATCGAGACATTTAATGGCAGTGTTTATGTAACTATTTTCATGTTGGAACCATCCTGTAAGTTACAAGTCTGGAGGATGCAAGGGAAAGATTCATGGATTAGAAAATTTGTGATCGATGATGTACCAAATGGTTGGGAGAATAAATTATCGCAGATCATTAAAACCTTCGAATATGGAACCATATTGTTTCTAGTCTATGGTGACTTATTTTGCTTGGATACAATTGGAAAGAAGGTAAAAATGGAAACATTGAATCTAGATAATAGAGTAATTACAGGGTTTTCTAATATAGATTCTTTGAATTTTGGATCTCTCCCAAAAATTTTGGAAGGAAATAAATGA

mRNA sequence

ATGGAGAAGATGGAAAGTAAGATGGTTATGAAAAAAAATGGAGGGCTAATTCCACCGCATATTCTTCAGGTAATCTTCTCCAACCTTCCTATCTCTAATTTGCCCACTTGCCGGCTCGTCGGTAAAACTTGGAATGATTTGGTTCTCGATTACGCTTCGTCTTGTAAATCCCTTCCACAAACTTTCTTTCTATTTACCTCTGAAAGAATAATCCCCGATGCTAATCATTCTTATCGTCTTCGTTATTGCAATCCTAAGATCCATTGTATCTCTACCAATACCATGGGTTCCGTTGCCTCATTTGGGATTGATAGTGATTCTTCGAAGATCTTTATTTTCAATCACTGCAATGGCCTTATGTTTATTACCAAACATACTAATGGTGGTCGTTGTGACGGCATATTAAATCCAATGACTAATGAGTTCTTCAAACTTCCTGGACCGGAAATAGATGATTTCTACACTATCGGATTTGGTTTCAGCCCTAACACGAATCAGTACAAATTGTTCAAAGTTCGTTTTCGTCCATTAGAATCGAGTTGTGTGATGGAGGTTTTTAGGTTGGGTAGAAATGGAACCAACCAATGGAACCATTTTAAGTGTCTGCCTTTCAACATCCACTATCATGGTGCTTATTTGAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGGAAACAACTTTGCTATATATGCTCTTGACGTTGAAACTGAAAAAATTGATCGGATTGTGACTTCATTGGAAGTTGGCCCTTATGAACACTCTAGGGAAGTCATCGAGACATTTAATGGCAGTGTTTATGTAACTATTTTCATGTTGGAACCATCCTGTAAGTTACAAGTCTGGAGGATGCAAGGGAAAGATTCATGGATTAGAAAATTTGTGATCGATGATGTACCAAATGGTTGGGAGAATAAATTATCGCAGATCATTAAAACCTTCGAATATGGAACCATATTGTTTCTAGTCTATGGTGACTTATTTTGCTTGGATACAATTGGAAAGAAGGTAAAAATGGAAACATTGAATCTAGATAATAGAGTAATTACAGGGTTTTCTAATATAGATTCTTTGAATTTTGGATCTCTCCCAAAAATTTTGGAAGGAAATAAATGA

Coding sequence (CDS)

ATGGAGAAGATGGAAAGTAAGATGGTTATGAAAAAAAATGGAGGGCTAATTCCACCGCATATTCTTCAGGTAATCTTCTCCAACCTTCCTATCTCTAATTTGCCCACTTGCCGGCTCGTCGGTAAAACTTGGAATGATTTGGTTCTCGATTACGCTTCGTCTTGTAAATCCCTTCCACAAACTTTCTTTCTATTTACCTCTGAAAGAATAATCCCCGATGCTAATCATTCTTATCGTCTTCGTTATTGCAATCCTAAGATCCATTGTATCTCTACCAATACCATGGGTTCCGTTGCCTCATTTGGGATTGATAGTGATTCTTCGAAGATCTTTATTTTCAATCACTGCAATGGCCTTATGTTTATTACCAAACATACTAATGGTGGTCGTTGTGACGGCATATTAAATCCAATGACTAATGAGTTCTTCAAACTTCCTGGACCGGAAATAGATGATTTCTACACTATCGGATTTGGTTTCAGCCCTAACACGAATCAGTACAAATTGTTCAAAGTTCGTTTTCGTCCATTAGAATCGAGTTGTGTGATGGAGGTTTTTAGGTTGGGTAGAAATGGAACCAACCAATGGAACCATTTTAAGTGTCTGCCTTTCAACATCCACTATCATGGTGCTTATTTGAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGGAAACAACTTTGCTATATATGCTCTTGACGTTGAAACTGAAAAAATTGATCGGATTGTGACTTCATTGGAAGTTGGCCCTTATGAACACTCTAGGGAAGTCATCGAGACATTTAATGGCAGTGTTTATGTAACTATTTTCATGTTGGAACCATCCTGTAAGTTACAAGTCTGGAGGATGCAAGGGAAAGATTCATGGATTAGAAAATTTGTGATCGATGATGTACCAAATGGTTGGGAGAATAAATTATCGCAGATCATTAAAACCTTCGAATATGGAACCATATTGTTTCTAGTCTATGGTGACTTATTTTGCTTGGATACAATTGGAAAGAAGGTAAAAATGGAAACATTGAATCTAGATAATAGAGTAATTACAGGGTTTTCTAATATAGATTCTTTGAATTTTGGATCTCTCCCAAAAATTTTGGAAGGAAATAAATGA

Protein sequence

MEKMESKMVMKKNGGLIPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASSCKSLPQTFFLFTSERIIPDANHSYRLRYCNPKIHCISTNTMGSVASFGIDSDSSKIFIFNHCNGLMFITKHTNGGRCDGILNPMTNEFFKLPGPEIDDFYTIGFGFSPNTNQYKLFKVRFRPLESSCVMEVFRLGRNGTNQWNHFKCLPFNIHYHGAYLNGVIYWIGKEKGNNFAIYALDVETEKIDRIVTSLEVGPYEHSREVIETFNGSVYVTIFMLEPSCKLQVWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKTFEYGTILFLVYGDLFCLDTIGKKVKMETLNLDNRVITGFSNIDSLNFGSLPKILEGNK
Homology
[Close]
BLAST of ClCG11G004750 vs. TrEMBL
Match: A0A0A0KSJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.6e-71
Identity = 171/396 (43.18%), Postives = 234/396 (59.09%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGL-IPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASSCKSLP 60
           MEK+E K  +  N GL +PP++++VI   L IS+LP CRLV +TWN L+L+YASS K +P
Sbjct: 1   MEKLECKRNI--NLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIP 60

Query: 61  QTFFLFTSERIIPDAN-----HSYRLRYCNPKIHCISTN-TMGSVASFGIDSDS--SKIF 120
              FL  S  I    N     H      CNPK++CI  N T   +ASF  D++    KI 
Sbjct: 61  N-LFLAASYEIHYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIK 120

Query: 121 IFNHCNGLMFITKHTNGGRCDGILNPMTNEFF------KLPGPEIDDFYTIGFGFSPNTN 180
           I N CNGL++I K  +   C+GILNPMTNEFF      K+   +I  FY  GFGF+  T 
Sbjct: 121 ILNSCNGLLYIHKVGDENFCNGILNPMTNEFFILSTQPKVKNEDISCFY--GFGFNLKTK 180

Query: 181 QYKLFKVRFRPLESSCVMEVFRLGRNG-TNQWNHFKCLPFNIHYHGAYLNGVIYWIGKEK 240
           QYKLFK      +S  +MEV R G+N  T +W H  CLPF  +  G YLNGVIYWIG++K
Sbjct: 181 QYKLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQK 240

Query: 241 GNNFAIYALDVETEKIDRIVTSLEVGPYEHSRE---VIETFNGSVYVTIFMLEPSC-KLQ 300
            N   IY+L+VETEKI+ I T L+V P  ++ +    I  +NG++Y TI++    C K+Q
Sbjct: 241 ENKSVIYSLNVETEKIESI-TVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQ 300

Query: 301 VWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKTFEYGTILFLVYGDL-FCLDTIGKKVKM 360
           +W MQGKD W+++FV+ D+ + + +    ++K FE G   F V   L  C D  G ++K 
Sbjct: 301 LWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKK 360

Query: 361 E-----TLNLDNRVITGFSNIDSLNFGSLPKILEGN 371
           +       N    ++    + DSLNFGSLP IL+G+
Sbjct: 361 KCRMKRVSNGRGNLVGQLCHFDSLNFGSLPNILDGH 390

[Close]
BLAST of ClCG11G004750 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 177/411 (43.07%), Postives = 227/411 (55.23%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGLIPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASS--CKSL 60
           ME  E +M +    GL PP I + IFS L IS+LP+CRLV  TWNDLVLDYASS   + L
Sbjct: 11  MEISERRMTINCGKGL-PPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFL 70

Query: 61  PQTFFLFTSERIIPDANHSYRLRYCNPKIHCISTNTMGSVASFGIDSDSS---------- 120
              F L TS+R +     +Y+L  CNPK+HCI+ +T      F  D +S           
Sbjct: 71  KNAFLLSTSDRGL-----NYKL--CNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFD 130

Query: 121 -----KIFIFNHCNGLMFITKHTNGGRCDGILNPMTNEFFKL-PGPEIDDFYTIGFGFSP 180
                 I +   CNGLM I+K ++   C GI NPMTNEF ++      DDFY  GFGFSP
Sbjct: 131 GDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSP 190

Query: 181 NTNQYKLFKV---RFR------PLESSCVMEVFRLGRNGT-------NQWNHFKCLPFNI 240
            T QYKLF+V    FR       +++   MEV   GR+GT       NQW     LPF I
Sbjct: 191 ITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEI 250

Query: 241 HYHGAYLNGVIYWIGKEKGNN----FAIYALDVETEKIDRIVTSLEVGPYEHSREVIETF 300
              G YLNG+IYW+ KEKG +    + IYALDVETE I+  V  L+V    + +  I  F
Sbjct: 251 VADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVV-LQVPSNGYGK--IHQF 310

Query: 301 NGSVYVT--IFMLEPSCKLQVWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKTFEYGTIL 360
           NG++Y T  I   + S  +QVWRMQ KDSW+RKFVI D+   W +   Q+IK FE   IL
Sbjct: 311 NGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIH--LQLIKMFEDEEIL 370

Query: 361 FLVYGDLFCLDTIGKKVKMETLNLDNRVITGFSNIDSLNFGSLPKILEGNK 372
           F++  D FC      K K   ++ + +       I+SLNFG L +ILEG +
Sbjct: 371 FMINMDFFCFYNPSSK-KKRIISKNQKKKRYICQIESLNFGRLSQILEGTQ 407

[Close]
BLAST of ClCG11G004750 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.5e-63
Identity = 174/415 (41.93%), Postives = 227/415 (54.70%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGLIPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASS--CKSL 60
           ME  E +M +    GL PP I + IFS L ISNLP+CR V KTWN LVL YASS   + L
Sbjct: 27  MEMGERRMSIDWGKGL-PPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFL 86

Query: 61  PQTFFLFTSERIIPDANHSYRLRYCNPKIHCISTNTMGSVASFGIDSD------------ 120
              F L TS+R++     +Y L  CNPK+HCI+ +   S      D +            
Sbjct: 87  TNAFLLSTSDRML-----NYEL--CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQFY 146

Query: 121 ---SSKIFIFNHCNGLMFITKHTNGGRCDGILNPMTNEFFKLPGPE-IDDFYTIGFGFSP 180
              +  I + + CNGLMFI+K ++   C GI NPMTNEFF++   +  DDFY  GFG S 
Sbjct: 147 GDWTFMILLAHPCNGLMFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSA 206

Query: 181 NTNQYKLFKV--------RFRPL------ESSCVMEVFRLGRNGT------NQWNHFKCL 240
            + QYKLF+V        RFR +      ++   MEV   GR+GT      NQW H   L
Sbjct: 207 ISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNL 266

Query: 241 PFNIHYHGAYLNGVIYWIGKEKG----NNFAIYALDVETEKIDRIVTSLEVGPYEHSREV 300
             ++  HG YLNG+IYW+GKEKG      + IYALDVETE+I+  V  L+V   + S   
Sbjct: 267 SCDL-IHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVI-LQV---QASDGK 326

Query: 301 IETFNGSVYVTIFM--LEPSCKLQVWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKTFEY 360
           +  FNG++Y   ++   + S  +QVW MQ K SWIR+FVI D+   W     ++IK FE 
Sbjct: 327 MHPFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEW--GCLELIKIFED 386

Query: 361 GTILFLVYGDLFCL--DTIGKKVKMETLNLDNRVITGFSNIDSLNFGSLPKILEG 370
           G ILFL+  D FC       KK  +      NR +     I+ LNFGSLP+ILEG
Sbjct: 387 GEILFLIDSDFFCFYHPLTEKKRIISKNQKKNRFV---CQIECLNFGSLPEILEG 423

[Close]
BLAST of ClCG11G004750 vs. TrEMBL
Match: A0A0A0KUJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.1e-60
Identity = 141/304 (46.38%), Postives = 189/304 (62.17%), Query Frame = 1 

Query: 81  RYCNPKIHCISTNTMGSVASFGIDSDS--SKIFIFNHCNGLMFITKHTN-GGRCDGILNP 140
           R CN KIHCI  +TM  V SFG + D   S + I + C+ L+ I+K  +    C+GILNP
Sbjct: 3   RECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGILNP 62

Query: 141 MTNEFFKLPGPEIDD---FYTIGFGFSPNTNQYKLFKVRFRP-LESSCVMEVFRLG-RNG 200
           MTNEF +LP  E D+   +Y  GFGF+P T QYKLF+V  R   E   +ME+ R G R+ 
Sbjct: 63  MTNEFLELPDREYDESSPYY--GFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSE 122

Query: 201 TNQ-WNHFKCLPFNIHYHGAYLNGVIYWIGKEKGNNFAIYALDVETEKIDRIVTSLEVGP 260
           T + W HFKC P +   HGAYLNGVIYW+GKEKG  + IYALDVETE+++ +V  LEVGP
Sbjct: 123 TKEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQME-LVADLEVGP 182

Query: 261 YE-HSREVIETFNGSVYVTIFMLEPSC-KLQVWRMQGKDSWIRKFVI-DDVPNGWENKLS 320
           +       I T N SVY  + ++ P C K+Q+W MQGK+ WIR+FV+ D+V  G    + 
Sbjct: 183 HNFRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPM- 242

Query: 321 QIIKTFEYGTILFLVYGDLFCLDTIGKKVKMETL---NLDNRVITGFSNIDSLNFGSLPK 370
           Q++K  + G   F V G++ C D  G  +K+E+L    ++ R   G   I+SLNFGS+  
Sbjct: 243 QMVKVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETR-FDGLCQIESLNFGSIQN 301

[Close]
BLAST of ClCG11G004750 vs. TrEMBL
Match: A0A0A0LUP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.1e-54
Identity = 170/418 (40.67%), Postives = 223/418 (53.35%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGLIPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASS--CKSL 60
           ME  E +M +    GL PP I ++IFS L ISNLP+CR V KTWN LVL YASS   + L
Sbjct: 27  MEMGERRMSIDWGKGL-PPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFL 86

Query: 61  PQTFFLFTSERIIPDANHSYRLRYCNPKIHCIS-TNTMGS-----------VASFGIDSD 120
              F L TS++++     +Y L  CNPK+H I+  NT  S             SF    D
Sbjct: 87  TNAFLLSTSDQML-----NYEL--CNPKMHSINLDNTQCSDDVDLEMEFIKSGSFQFYGD 146

Query: 121 SSKIFIFNH-CNGLMFITKHTNGGRCDGILNPMTNEFFKLPGPE-IDDFYTIGFGFSPNT 180
            + + +  H CNGL+FI+K ++   C GI NPMTNEFF++   +  DDFY  GFG SP T
Sbjct: 147 WTFMILMAHPCNGLVFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGLSPVT 206

Query: 181 NQYKLFKV--------RFRPLESSC-------VMEVFRLGRNGT------NQWNHFKCLP 240
            QYKLF+         RFR L S+C       +MEV   GR+GT      NQW H   L 
Sbjct: 207 KQYKLFRTSKAIPYSKRFR-LVSTCSTDDTHYMMEVLTFGRSGTNHIPIHNQWRHLHNLS 266

Query: 241 FNIHY--HGAYLNGVIYWIGKEKGN-----NFAIYALDVETEKIDRIVTSLEVGPYEHSR 300
           ++I     G YLNG+I+  G EK N      + IYALD ETE+I+  V  L+V    H+R
Sbjct: 267 YDIVVGDGGVYLNGIIF--GWEKKNVKRKRKYDIYALDDETEQIEMSVI-LQV----HAR 326

Query: 301 E-VIETFNGSVYVTIF--MLEPSCKLQVWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKT 360
           +  +  FNG++Y T +    +    +QVW MQ K SWIRKFVI D+   W     ++IK 
Sbjct: 327 DGKMHLFNGTIYATFYTNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQW--SCLELIKM 386

Query: 361 FEYGTI--LFLVYGDLFCLDTIGKKVKMETLNLDNRVITGFSNIDSLNFGSLPKILEG 370
           F+ G I   F  Y  L          K   ++ D +  +    I+ LNFGSLPKI +G
Sbjct: 387 FKDGDISDFFYFYNPL--------TKKKSIISKDQKKKSCVCQIECLNFGSLPKIFDG 418

[Close]
BLAST of ClCG11G004750 vs. NCBI nr
Match: gi|659119533|ref|XP_008459707.1| (PREDICTED: putative F-box protein At1g55070 [Cucumis melo])

HSP 1 Score: 299.3 bits (765), Expect = 9.4e-78
Identity = 178/383 (46.48%), Postives = 239/383 (62.40%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGL-IPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASSCKSLP 60
           ME +E+K  +  N  L +PPHI++ IFS L ISNLPTCR+V KTWN+LVL+YASS K LP
Sbjct: 1   MEILETKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFLP 60

Query: 61  QTFFLFTSERIIPDANHSYRLRYCNPKIHCISTNTMGS-VASFGIDSDSSKIFIFNHCNG 120
            T    +    I +        +CNPKIHC+  ++  S VASFG + D S I I N CNG
Sbjct: 61  TTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNG 120

Query: 121 LMFITKHTNGGRCDGILNPMTNEFFKLPGPEID-DFYTIGFGFSPNTNQYKLFKVRFRPL 180
           L++I K T    C+GILNPMTNEF ++P PEI+ D ++IGFGFSP T QYKLF+     L
Sbjct: 121 LLYICKFTFDSLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVL 180

Query: 181 ES--SC--VMEVFRLGRNGTNQWNHFKCLPFNIHYHGAYLNGVIYWIGK--EKGNNFAIY 240
           E+   C  +ME+F    NG  QW HF+ LPF + +HG YLNGVIYWIGK  EK     IY
Sbjct: 181 ENLKKCHYIMEIFTFD-NGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIY 240

Query: 241 ALDVETEKIDRIVTSLEVGPYEHSREVIETFNGSVYVTIFMLE-----PSCKLQVWRMQG 300
           ALDV+TE+++   T LE+GP       I+ F   VY  I +++      S K+++WRMQ 
Sbjct: 241 ALDVDTEQMECTAT-LEIGP-SLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQK 300

Query: 301 KDSWIRKFVIDDVPNGWENKLSQIIKTFEYGTILFLVYGDLFCLDTIGKKVKMETLN-LD 360
           KDSWI++F ID+   G       +I  FE G +L  +  ++F LD   KK+K++TLN  +
Sbjct: 301 KDSWIKEFSIDEESFG-------LITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNSSE 360

Query: 361 NRV-ITGFSNIDSLNFGSLPKIL 368
           +R+ + G + I+S+NF     IL
Sbjct: 361 SRIKVIGCNTINSINFECFSNIL 373

[Close]
BLAST of ClCG11G004750 vs. NCBI nr
Match: gi|659119531|ref|XP_008459706.1| (PREDICTED: uncharacterized protein LOC103498748 [Cucumis melo])

HSP 1 Score: 294.7 bits (753), Expect = 2.3e-76
Identity = 179/392 (45.66%), Postives = 241/392 (61.48%), Query Frame = 1 

Query: 1   MEKMESK--MVMKKNGGL-IPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASSCKS 60
           ME+++SK  ++ K +GG+ +P ++++ IFS L  SNLP  RLV KTWND V++YASS K 
Sbjct: 1   MEELKSKRRIMNKDDGGMRLPFNVVKEIFSKLAFSNLPAYRLVCKTWNDFVINYASSYKF 60

Query: 61  LPQTFFLFTSERIIPDANHSYRL-------RYCNPKIHCISTNTMGSVASFGIDSD--SS 120
            P  FFL TS+  I  +N S          R CN KIH I  +TM  VASFG + D   S
Sbjct: 61  FPNVFFLCTSD--IRPSNCSCNCNSSCGSTRECNFKIHYIDIDTMNCVASFGFEDDYNHS 120

Query: 121 KIFIFNHCNGLMFITKHTNGGR-CDGILNPMTNEFFKLPGPEIDDFYTI-GFGFSPNTNQ 180
            + I + C  L+ I+K  N    C+GILNPMTNEFF+LP  E D+ +   GFGFS  T Q
Sbjct: 121 NVSIVSSCKALLLISKLINSDNLCEGILNPMTNEFFELPECEFDESHPFYGFGFSLKTKQ 180

Query: 181 YKLFKVRFRP-LESSCVMEVFRLG-RNGTNQ-WNHFKCLPFNIHYHGAYLNGVIYWIGKE 240
           YKLF+V +    E  C+ME+ R G R+GT + W HFKC P +   HGAYLNGVIYW+GKE
Sbjct: 181 YKLFRVTYDDRYELYCIMEIMRFGDRSGTKEEWRHFKCPPISFDNHGAYLNGVIYWVGKE 240

Query: 241 KGNNFAIYALDVETEKIDRIVTSLEVGPYE-HSREVIETFNGSVYVTIFMLEPSC-KLQV 300
           +G    IYALDVETE+I+ +   LEVGP+       I T N SVY  + ++   C ++QV
Sbjct: 241 EGKEHVIYALDVETEQIESVAV-LEVGPHSFRYNGYITTLNNSVYAHVLIIGTCCTRVQV 300

Query: 301 WRMQGKDSWIRKFVI-DDVPNGWENKLSQIIKTFEYGTILFLVYGDLFCLDTIGKKVKME 360
           W MQ K SWIR+FV+ D++P      + Q++K  + G   F V G++FC D  G  +K++
Sbjct: 301 WTMQEKKSWIREFVMHDEIPKSLIMPM-QLVKVLKDGERWFFVDGNIFCCDKTGMNIKIK 360

Query: 361 TL---NLDNRVITGFSNIDSLNFGSLPKILEG 370
           +L    ++ R   G   I+SLNFGS+  IL G
Sbjct: 361 SLWNSKIETR-FDGLCQIESLNFGSIQNILAG 387

[Close]
BLAST of ClCG11G004750 vs. NCBI nr
Match: gi|659117583|ref|XP_008458678.1| (PREDICTED: uncharacterized protein LOC103498006 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75
Identity = 157/286 (54.90%), Postives = 193/286 (67.48%), Query Frame = 1 

Query: 87  IHCISTNTM-GSVASFGIDSD--SSKIFIFNHCNGLMFITKHTNGGR-CDGILNPMTNEF 146
           +H   TN M  SV S G+D+      I +   CNGL+F    + G R C  I+NP+TNEF
Sbjct: 60  MHAFCTNNMISSVTSSGVDTHICHGAICVITSCNGLLFAILSSGGVRYCGAIINPLTNEF 119

Query: 147 FKLPGPEIDDFYTIGFGFSPNTNQYKLFKVRFRPLESSCVMEVFRLGRNGTNQWNHFKCL 206
           F+L  P   +   IGFGFSP TNQYKLF V   P      M++ +  R+GTN+     CL
Sbjct: 120 FELHIPPPPEDAVIGFGFSPKTNQYKLFTVL--PFVPYSEMQITKFDRHGTNRCKDIMCL 179

Query: 207 PFNIHYHGAYLNGVIYWIGKEKGNNFAIYALDVETEKIDRIVTSLEVGPYEHSREVIETF 266
           PFNI  HG+YLNG IYWIG+E+   F IYALDVETEKI+   T+L+VG        I+T 
Sbjct: 180 PFNIDGHGSYLNGFIYWIGREQ-TKFVIYALDVETEKIEWN-TTLDVGTLSFCSGEIQTL 239

Query: 267 NGSVYVTIFMLEPSCKLQVWRMQGKDSWIRKFVIDDVPNGWEN-KLSQIIKTFEYGTILF 326
           NGS+YVT+FM EPS  LQVWRMQGKDSWIR FVI DVP  W + +  Q++K FEYGT++F
Sbjct: 240 NGSIYVTVFMYEPSHMLQVWRMQGKDSWIRTFVIYDVPKRWWSAEYFQLVKIFEYGTVMF 299

Query: 327 LVYGDLFCLDTIGKKVKMETLNLDNRVITGFSNIDSLNFGSLPKIL 368
           LV GDLFC+DT GKKVKM T   DN+++T FSNID+LNFGSLP +L
Sbjct: 300 LVDGDLFCIDTSGKKVKMTTFYPDNKLVTRFSNIDALNFGSLPAVL 341

[Close]
BLAST of ClCG11G004750 vs. NCBI nr
Match: gi|449447693|ref|XP_004141602.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 6.5e-71
Identity = 171/396 (43.18%), Postives = 234/396 (59.09%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGL-IPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASSCKSLP 60
           MEK+E K  +  N GL +PP++++VI   L IS+LP CRLV +TWN L+L+YASS K +P
Sbjct: 1   MEKLECKRNI--NLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIP 60

Query: 61  QTFFLFTSERIIPDAN-----HSYRLRYCNPKIHCISTN-TMGSVASFGIDSDS--SKIF 120
              FL  S  I    N     H      CNPK++CI  N T   +ASF  D++    KI 
Sbjct: 61  N-LFLAASYEIHYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIK 120

Query: 121 IFNHCNGLMFITKHTNGGRCDGILNPMTNEFF------KLPGPEIDDFYTIGFGFSPNTN 180
           I N CNGL++I K  +   C+GILNPMTNEFF      K+   +I  FY  GFGF+  T 
Sbjct: 121 ILNSCNGLLYIHKVGDENFCNGILNPMTNEFFILSTQPKVKNEDISCFY--GFGFNLKTK 180

Query: 181 QYKLFKVRFRPLESSCVMEVFRLGRNG-TNQWNHFKCLPFNIHYHGAYLNGVIYWIGKEK 240
           QYKLFK      +S  +MEV R G+N  T +W H  CLPF  +  G YLNGVIYWIG++K
Sbjct: 181 QYKLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQK 240

Query: 241 GNNFAIYALDVETEKIDRIVTSLEVGPYEHSRE---VIETFNGSVYVTIFMLEPSC-KLQ 300
            N   IY+L+VETEKI+ I T L+V P  ++ +    I  +NG++Y TI++    C K+Q
Sbjct: 241 ENKSVIYSLNVETEKIESI-TVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQ 300

Query: 301 VWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKTFEYGTILFLVYGDL-FCLDTIGKKVKM 360
           +W MQGKD W+++FV+ D+ + + +    ++K FE G   F V   L  C D  G ++K 
Sbjct: 301 LWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKK 360

Query: 361 E-----TLNLDNRVITGFSNIDSLNFGSLPKILEGN 371
           +       N    ++    + DSLNFGSLP IL+G+
Sbjct: 361 KCRMKRVSNGRGNLVGQLCHFDSLNFGSLPNILDGH 390

[Close]
BLAST of ClCG11G004750 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 177/411 (43.07%), Postives = 227/411 (55.23%), Query Frame = 1 

Query: 1   MEKMESKMVMKKNGGLIPPHILQVIFSNLPISNLPTCRLVGKTWNDLVLDYASS--CKSL 60
           ME  E +M +    GL PP I + IFS L IS+LP+CRLV  TWNDLVLDYASS   + L
Sbjct: 11  MEISERRMTINCGKGL-PPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFL 70

Query: 61  PQTFFLFTSERIIPDANHSYRLRYCNPKIHCISTNTMGSVASFGIDSDSS---------- 120
              F L TS+R +     +Y+L  CNPK+HCI+ +T      F  D +S           
Sbjct: 71  KNAFLLSTSDRGL-----NYKL--CNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFD 130

Query: 121 -----KIFIFNHCNGLMFITKHTNGGRCDGILNPMTNEFFKL-PGPEIDDFYTIGFGFSP 180
                 I +   CNGLM I+K ++   C GI NPMTNEF ++      DDFY  GFGFSP
Sbjct: 131 GDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSP 190

Query: 181 NTNQYKLFKV---RFR------PLESSCVMEVFRLGRNGT-------NQWNHFKCLPFNI 240
            T QYKLF+V    FR       +++   MEV   GR+GT       NQW     LPF I
Sbjct: 191 ITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEI 250

Query: 241 HYHGAYLNGVIYWIGKEKGNN----FAIYALDVETEKIDRIVTSLEVGPYEHSREVIETF 300
              G YLNG+IYW+ KEKG +    + IYALDVETE I+  V  L+V    + +  I  F
Sbjct: 251 VADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVV-LQVPSNGYGK--IHQF 310

Query: 301 NGSVYVT--IFMLEPSCKLQVWRMQGKDSWIRKFVIDDVPNGWENKLSQIIKTFEYGTIL 360
           NG++Y T  I   + S  +QVWRMQ KDSW+RKFVI D+   W +   Q+IK FE   IL
Sbjct: 311 NGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIH--LQLIKMFEDEEIL 370

Query: 361 FLVYGDLFCLDTIGKKVKMETLNLDNRVITGFSNIDSLNFGSLPKILEGNK 372
           F++  D FC      K K   ++ + +       I+SLNFG L +ILEG +
Sbjct: 371 FMINMDFFCFYNPSSK-KKRIISKNQKKKRYICQIESLNFGRLSQILEGTQ 407

The following BLAST results are available for this feature:
BLAST of ClCG11G004750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSJ2_CUCSA4.6e-7143.18Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1[more]
A0A0A0LWG1_CUCSA1.8e-6743.07Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1[more]
A0A0A0LPC6_CUCSA3.5e-6341.93Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1[more]
A0A0A0KUJ1_CUCSA8.1e-6046.38Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1[more]
A0A0A0LUP7_CUCSA5.1e-5440.67Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1[more]
BLAST of ClCG11G004750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119533|ref|XP_008459707.1|9.4e-7846.48PREDICTED: putative F-box protein At1g55070 [Cucumis melo][more]
gi|659119531|ref|XP_008459706.1|2.3e-7645.66PREDICTED: uncharacterized protein LOC103498748 [Cucumis melo][more]
gi|659117583|ref|XP_008458678.1|2.6e-7554.90PREDICTED: uncharacterized protein LOC103498006 [Cucumis melo][more]
gi|449447693|ref|XP_004141602.1|6.5e-7143.18PREDICTED: F-box protein At3g07870-like [Cucumis sativus][more]
gi|700210076|gb|KGN65172.1|2.6e-6743.07hypothetical protein Csa_1G257290 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR017451F-box-assoc_interact_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G004750.1ClCG11G004750.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 17..56
score: 2.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 16..75
score: 3.7
IPR017451F-box associated interaction domainTIGRFAMsTIGR01640TIGR01640coord: 114..311
score: 3.1
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 16..50
score: 6.
NoneNo IPR availablePANTHERPTHR32133FAMILY NOT NAMEDcoord: 17..297
score: 1.8