ClCG11G001480 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G001480
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Stress responsive alpha-beta barrel domain protein LENGTH=263
Location	CG_Chr11 : 1704818 .. 1705687 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCGCCCAGCGGAGCGTCGAGCACGTCCCTATCGTTCAAAATCTGTGATTCTCAATCATTTGACGTTAAAATGCTTTCATCTCCTCTCCGGACATTCTCAACGCTATCTTACAATTCCAGGCATCTACGCCTCCGCCTCCGCCTCCGCCGCCCAAACCCTTCTCTTTCTTTCCGACCATTCTCAGTCAACATGTCCGCCGCCGCTCACACTCAACCAATCGAGCACGTCGTCCTCTTCAAGGTCAAAGACGGCCTCGATTCCTCCAAGGTAAACGACATGCTCACCGGCCTCAATGGTCTGATCTCTCTCGACCAAGTCCTCCATCTCACCGCCGGTCCCATCCTCCGCAACCGCTCCTCCTCCTCCACCTTCACTCACCTCCTTCACAGCCGCTACCCCTCCAAGGAGGATCTCTCCATCTACTCCGCCCACCCCGCCCACATGAACGTCGTCAAGCAATTTGTTCTTCCCATCTGCGACGACATCATGGCCGTCGATTGGGTCGCCGATGCTTTGAAAGGCCCCGTCGTCGCACCTCCTGGCTCTGCTCTTAGACTCACCCTCCTCAAACTCAAGGAGAATCTGGGCGAGGAAGTTAAGAGCGAGATCTTGGAGGTCATCGCAGGGTTGAGGGAGAAATTAGGGCCCAATGTCCAGCTGACGGTGGGCGAGAACTTTTCCCCGGCCAGAGCCAAGGGGTTCTCAATTGCTTCGATTGCAATTTTCCCTGGGCCGAATGAGTTGGAGGCAGCGGCTTCAGACCAAGAAATGGTGGAATTGCAGAAAGAGAAGGTCAGGGAGTATTTGGAGAGTGTAATTGTGGTGGATTATGTGGTTCCGCCACCGCAAACGGCGAGTCTCTAA

mRNA sequence

ATGTTATCGCCCAGCGGAGCGTCGAGCACGTCCCTATCGTTCAAAATCTGTGATTCTCAATCATTTGACGTTAAAATGCTTTCATCTCCTCTCCGGACATTCTCAACGCTATCTTACAATTCCAGGCATCTACGCCTCCGCCTCCGCCTCCGCCGCCCAAACCCTTCTCTTTCTTTCCGACCATTCTCAGTCAACATGTCCGCCGCCGCTCACACTCAACCAATCGAGCACGTCGTCCTCTTCAAGGTCAAAGACGGCCTCGATTCCTCCAAGGTAAACGACATGCTCACCGGCCTCAATGGTCTGATCTCTCTCGACCAAGTCCTCCATCTCACCGCCGGTCCCATCCTCCGCAACCGCTCCTCCTCCTCCACCTTCACTCACCTCCTTCACAGCCGCTACCCCTCCAAGGAGGATCTCTCCATCTACTCCGCCCACCCCGCCCACATGAACGTCGTCAAGCAATTTGTTCTTCCCATCTGCGACGACATCATGGCCGTCGATTGGGTCGCCGATGCTTTGAAAGGCCCCGTCGTCGCACCTCCTGGCTCTGCTCTTAGACTCACCCTCCTCAAACTCAAGGAGAATCTGGGCGAGGAAGTTAAGAGCGAGATCTTGGAGGTCATCGCAGGGTTGAGGGAGAAATTAGGGCCCAATGTCCAGCTGACGGTGGGCGAGAACTTTTCCCCGGCCAGAGCCAAGGGGTTCTCAATTGCTTCGATTGCAATTTTCCCTGGGCCGAATGAGTTGGAGGCAGCGGCTTCAGACCAAGAAATGGTGGAATTGCAGAAAGAGAAGGTCAGGGAGTATTTGGAGAGTGTAATTGTGGTGGATTATGTGGTTCCGCCACCGCAAACGGCGAGTCTCTAA

Coding sequence (CDS)

ATGTTATCGCCCAGCGGAGCGTCGAGCACGTCCCTATCGTTCAAAATCTGTGATTCTCAATCATTTGACGTTAAAATGCTTTCATCTCCTCTCCGGACATTCTCAACGCTATCTTACAATTCCAGGCATCTACGCCTCCGCCTCCGCCTCCGCCGCCCAAACCCTTCTCTTTCTTTCCGACCATTCTCAGTCAACATGTCCGCCGCCGCTCACACTCAACCAATCGAGCACGTCGTCCTCTTCAAGGTCAAAGACGGCCTCGATTCCTCCAAGGTAAACGACATGCTCACCGGCCTCAATGGTCTGATCTCTCTCGACCAAGTCCTCCATCTCACCGCCGGTCCCATCCTCCGCAACCGCTCCTCCTCCTCCACCTTCACTCACCTCCTTCACAGCCGCTACCCCTCCAAGGAGGATCTCTCCATCTACTCCGCCCACCCCGCCCACATGAACGTCGTCAAGCAATTTGTTCTTCCCATCTGCGACGACATCATGGCCGTCGATTGGGTCGCCGATGCTTTGAAAGGCCCCGTCGTCGCACCTCCTGGCTCTGCTCTTAGACTCACCCTCCTCAAACTCAAGGAGAATCTGGGCGAGGAAGTTAAGAGCGAGATCTTGGAGGTCATCGCAGGGTTGAGGGAGAAATTAGGGCCCAATGTCCAGCTGACGGTGGGCGAGAACTTTTCCCCGGCCAGAGCCAAGGGGTTCTCAATTGCTTCGATTGCAATTTTCCCTGGGCCGAATGAGTTGGAGGCAGCGGCTTCAGACCAAGAAATGGTGGAATTGCAGAAAGAGAAGGTCAGGGAGTATTTGGAGAGTGTAATTGTGGTGGATTATGTGGTTCCGCCACCGCAAACGGCGAGTCTCTAA

Protein sequence

MLSPSGASSTSLSFKICDSQSFDVKMLSSPLRTFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVNMSAAAHTQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQTASL

Homology

[Close]

BLAST of ClCG11G001480 vs. Swiss-Prot
Match: UP3_ARATH (Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana GN=UP3 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.3e-70
Identity = 146/264 (55.30%), Postives = 185/264 (70.08%), Query Frame = 1


Query: 26  MLSSPLR-TFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVNMSAAAHTQPIEHVVLFKVK 85
           ++SSPL  T ST    ++H R+ LRL      L  R FSV  S+   +Q IEH+VLFK K
Sbjct: 9   LISSPLAFTIST----TKHSRINLRL------LPRRSFSVMSSSTPQSQIIEHIVLFKTK 68

Query: 86  DGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYS 145
           D  DS+K+  M+  LN L  LDQVLH++  P+ R  SS++ FTH+LHSRY SKEDL+ Y+
Sbjct: 69  DDADSTKITSMINNLNALAYLDQVLHISTSPLHRI-SSATAFTHVLHSRYESKEDLASYA 128

Query: 146 AHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSE 205
           AHP H+ VVK+ VLPICDDIMAVDW+AD + G V   PGS  +LTLLKLKE++ +E KSE
Sbjct: 129 AHPDHVRVVKESVLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSE 188

Query: 206 ILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQK 265
           I  VI GL EK     Q+TVGENFSPARAKGFSIASIA F   +E+EA  + +E+V  QK
Sbjct: 189 ITGVIKGLSEKFPGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQK 248

Query: 266 EKVREYLESVIVVDYVVPPPQTAS 289
           +KVR+Y++S IVV++VVP    +S
Sbjct: 249 DKVRDYVDSTIVVEFVVPSSSQSS 261

[Close]

BLAST of ClCG11G001480 vs. Swiss-Prot
Match: DABB1_ARATH (Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana GN=DABB1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-47
Identity = 106/210 (50.48%), Postives = 144/210 (68.57%), Query Frame = 1


Query: 75  IEHVVLFKVKDG-LDSSKVNDMLTGLNGLISLDQVLHLTAGPILRN-RSSSSTFTHLLHS 134
           +EHVVLFK+ D  +DS K+N M+ G+N L++LDQVLHL  G I R   +++S FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 135 RYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLK 194
           RY SKEDL+ Y+ HP H+ VVK+    I +DIMAVDW+A+     +  P GS  ++TLLK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 195 LKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEA 254
           LKEN+ EE K EI+EV   ++EK     Q+TVGENFSP R+K FSI SI+ F    E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 255 AASDQEMVELQKEKVREYLESVIVVDYVVP 283
                + ++LQ +K+R+Y++  IVV++ VP
Sbjct: 185 V---DDQMKLQNDKIRDYVDDTIVVEFNVP 207

[Close]

BLAST of ClCG11G001480 vs. TrEMBL
Match: A0A0A0LET1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000190 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-122
Identity = 240/284 (84.51%), Postives = 255/284 (89.79%), Query Frame = 1


Query: 8   SSTSLSFKICDSQSFDVK--MLSSPLRTFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVN 67
           S TSLS +ICDS    +K  MLSS LRT +TL   SR+LRL LRL   NP  S RPFSV 
Sbjct: 5   SGTSLSPEICDSHHLTLKFKMLSSALRTLTTLPSTSRNLRL-LRL---NPCPSSRPFSVK 64

Query: 68  MSAAAHTQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSST 127
           MSA  HTQPIEH+VLFKVK+G+DSSKVNDML GLNGLISLDQVLHLTAGPILRNRSSSS+
Sbjct: 65  MSA--HTQPIEHIVLFKVKEGIDSSKVNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSS 124

Query: 128 FTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSA 187
           FTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADAL+G +V PPGSA
Sbjct: 125 FTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALQGSLVPPPGSA 184

Query: 188 LRLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFP 247
           LR+T LKLKENLG+EVK +ILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAI P
Sbjct: 185 LRVTFLKLKENLGDEVKGQILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAILP 244

Query: 248 GPNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQTASL 290
           GPNELEAAASD+EMVELQKEKVRE+LESVIVVDYVVPPPQTASL
Sbjct: 245 GPNELEAAASDKEMVELQKEKVREHLESVIVVDYVVPPPQTASL 282

[Close]

BLAST of ClCG11G001480 vs. TrEMBL
Match: F6HGP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01340 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.0e-78
Identity = 149/223 (66.82%), Postives = 184/223 (82.51%), Query Frame = 1


Query: 67  SAAAHTQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTF 126
           S++A +Q IEHVVLFKVKD  + +KV  M++GLNGL SLDQVLHL+AGPI RNRSS   F
Sbjct: 3   SSSASSQIIEHVVLFKVKDETEPAKVAGMMSGLNGLTSLDQVLHLSAGPIHRNRSSMFKF 62

Query: 127 THLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSAL 186
           TH+LHSRY SKEDLS+YS HP+HM+VVK+ VLPIC+D+MAVDWVAD + GPVV  PGSA+
Sbjct: 63  THMLHSRYSSKEDLSVYSGHPSHMSVVKELVLPICEDVMAVDWVADNISGPVVPRPGSAM 122

Query: 187 RLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPG 246
           RLT ++L E LG+E K ++L  +  +++ LG   Q+T GENFSPARAKGFSIASIAIFPG
Sbjct: 123 RLTFMRLNEGLGDEEKEKVLGAVGEIKDCLGSLDQMTYGENFSPARAKGFSIASIAIFPG 182

Query: 247 PNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQTASL 290
            NELEA  S+ E+V+LQK+KVR+ L+ VIV+DYVVPPPQ+ASL
Sbjct: 183 LNELEALDSNPEVVQLQKDKVRDLLDRVIVLDYVVPPPQSASL 225

[Close]

BLAST of ClCG11G001480 vs. TrEMBL
Match: A5AMX3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041106 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 149/223 (66.82%), Postives = 183/223 (82.06%), Query Frame = 1


Query: 67  SAAAHTQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTF 126
           S++A +Q IEHVVLFKVKD  + +KV  M++GLNGL SLDQVLHL+AGPI RNRSS   F
Sbjct: 3   SSSASSQIIEHVVLFKVKDETEPAKVAGMMSGLNGLTSLDQVLHLSAGPIHRNRSSMFKF 62

Query: 127 THLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSAL 186
           TH+LHSRY SKEDLS+YS HP+HM+VVK+ VLPIC+D+MAVDWVAD   GPVV  PGSA+
Sbjct: 63  THMLHSRYSSKEDLSVYSGHPSHMSVVKESVLPICEDVMAVDWVADNXSGPVVPRPGSAM 122

Query: 187 RLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPG 246
           RLT ++L E LG+E K ++L  +  +++ LG   Q+T GENFSPARAKGFSIASIAIFPG
Sbjct: 123 RLTFMRLNEGLGDEEKEKVLGAVGEIKDCLGSLDQMTYGENFSPARAKGFSIASIAIFPG 182

Query: 247 PNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQTASL 290
            NELEA  S+ E+V+LQK+KVR+ L+ VIV+DYVVPPPQ+ASL
Sbjct: 183 LNELEALDSNPEVVQLQKDKVRDLLDRVIVLDYVVPPPQSASL 225

[Close]

BLAST of ClCG11G001480 vs. TrEMBL
Match: W9QUV7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027359 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-75
Identity = 147/222 (66.22%), Postives = 177/222 (79.73%), Query Frame = 1


Query: 68  AAAHTQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFT 127
           +++ +Q IEHVVLFKVKD  D SKV+ M+  LNGL SLD VLHL+AGP+LRN SSS  FT
Sbjct: 2   SSSPSQTIEHVVLFKVKDDTDQSKVSTMIASLNGLTSLDSVLHLSAGPVLRNGSSSFDFT 61

Query: 128 HLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALR 187
           H+LHSRY SK+DL+ YS HP+H++VVK+ VLPI DDIMAVDWVAD L GPV  P GSALR
Sbjct: 62  HILHSRYNSKDDLASYSQHPSHVSVVKESVLPIIDDIMAVDWVADDLPGPVALPLGSALR 121

Query: 188 LTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGP 247
           ++ LKLKE++GE  KSE+LE + G++       QL+VGENFSP RAKGFSIAS+A+F GP
Sbjct: 122 VSFLKLKESVGEGAKSEVLEAVKGVKNSFSGIDQLSVGENFSPGRAKGFSIASLAVFTGP 181

Query: 248 NELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQTASL 290
           +ELEA  SDQE+V   KEKVR+YLESV+VVDYVV  PQ ASL
Sbjct: 182 SELEAVDSDQELVNSHKEKVRDYLESVVVVDYVVSLPQPASL 223

[Close]

BLAST of ClCG11G001480 vs. TrEMBL
Match: M5W9H3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009927mg PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.3e-75
Identity = 153/246 (62.20%), Postives = 187/246 (76.02%), Query Frame = 1


Query: 48  LRLRRPNPSLSFRPFSVNMSA---AAHTQPI-EHVVLFKVKDGLDSSKVNDMLTGLNGLI 107
           LR  +P+PS  F P  +NMS+   AA  QPI EHVVL KVKD  D SKVN M+  LNGL 
Sbjct: 28  LRFSKPSPS-RFTP-KINMSSSASAAAAQPIVEHVVLLKVKDDTDPSKVNAMVNSLNGLA 87

Query: 108 SLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDD 167
           SL+  LHLTAGP+ R RSS   FTHLLH RY +K+DLS Y+ HP H++VVK  VLPICDD
Sbjct: 88  SLNLTLHLTAGPLNRTRSSPIAFTHLLHCRYSTKDDLSTYTVHPNHLSVVKDSVLPICDD 147

Query: 168 IMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLT 227
           +MAVDWVA+ ++GPV  PPGSA+R+T LKLKENLGEE KSEIL VI G++ K     Q++
Sbjct: 148 VMAVDWVAEDVQGPVAPPPGSAIRVTFLKLKENLGEESKSEILGVIKGIKGKFAEINQIS 207

Query: 228 VGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPP 287
            GENFSPARAKG+SIAS+A+ PG +ELE   S QE+  ++K+KV+E+LESVIV+DYVV  
Sbjct: 208 TGENFSPARAKGYSIASLAVLPGVSELEGLDSKQELANVEKDKVKEHLESVIVLDYVVAS 267

Query: 288 PQTASL 290
           PQ+ASL
Sbjct: 268 PQSASL 271

[Close]

BLAST of ClCG11G001480 vs. TAIR10
Match: AT2G31670.1 (AT2G31670.1 Stress responsive alpha-beta barrel domain protein)

HSP 1 Score: 265.4 bits (677), Expect = 4.1e-71
Identity = 146/264 (55.30%), Postives = 185/264 (70.08%), Query Frame = 1


Query: 26  MLSSPLR-TFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVNMSAAAHTQPIEHVVLFKVK 85
           ++SSPL  T ST    ++H R+ LRL      L  R FSV  S+   +Q IEH+VLFK K
Sbjct: 9   LISSPLAFTIST----TKHSRINLRL------LPRRSFSVMSSSTPQSQIIEHIVLFKTK 68

Query: 86  DGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYS 145
           D  DS+K+  M+  LN L  LDQVLH++  P+ R  SS++ FTH+LHSRY SKEDL+ Y+
Sbjct: 69  DDADSTKITSMINNLNALAYLDQVLHISTSPLHRI-SSATAFTHVLHSRYESKEDLASYA 128

Query: 146 AHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSE 205
           AHP H+ VVK+ VLPICDDIMAVDW+AD + G V   PGS  +LTLLKLKE++ +E KSE
Sbjct: 129 AHPDHVRVVKESVLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSE 188

Query: 206 ILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQK 265
           I  VI GL EK     Q+TVGENFSPARAKGFSIASIA F   +E+EA  + +E+V  QK
Sbjct: 189 ITGVIKGLSEKFPGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQK 248

Query: 266 EKVREYLESVIVVDYVVPPPQTAS 289
           +KVR+Y++S IVV++VVP    +S
Sbjct: 249 DKVRDYVDSTIVVEFVVPSSSQSS 261

[Close]

BLAST of ClCG11G001480 vs. TAIR10
Match: AT1G51360.1 (AT1G51360.1 dimeric A/B barrel domainS-protein 1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 106/210 (50.48%), Postives = 144/210 (68.57%), Query Frame = 1


Query: 75  IEHVVLFKVKDG-LDSSKVNDMLTGLNGLISLDQVLHLTAGPILRN-RSSSSTFTHLLHS 134
           +EHVVLFK+ D  +DS K+N M+ G+N L++LDQVLHL  G I R   +++S FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 135 RYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLK 194
           RY SKEDL+ Y+ HP H+ VVK+    I +DIMAVDW+A+     +  P GS  ++TLLK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 195 LKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEA 254
           LKEN+ EE K EI+EV   ++EK     Q+TVGENFSP R+K FSI SI+ F    E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 255 AASDQEMVELQKEKVREYLESVIVVDYVVP 283
                + ++LQ +K+R+Y++  IVV++ VP
Sbjct: 185 V---DDQMKLQNDKIRDYVDDTIVVEFNVP 207

[Close]

BLAST of ClCG11G001480 vs. NCBI nr
Match: gi|778665543|ref|XP_011648585.1| (PREDICTED: uncharacterized protein LOC105434531 [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-122
Identity = 240/284 (84.51%), Postives = 255/284 (89.79%), Query Frame = 1


Query: 8   SSTSLSFKICDSQSFDVK--MLSSPLRTFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVN 67
           S TSLS +ICDS    +K  MLSS LRT +TL   SR+LRL LRL   NP  S RPFSV 
Sbjct: 5   SGTSLSPEICDSHHLTLKFKMLSSALRTLTTLPSTSRNLRL-LRL---NPCPSSRPFSVK 64

Query: 68  MSAAAHTQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSST 127
           MSA  HTQPIEH+VLFKVK+G+DSSKVNDML GLNGLISLDQVLHLTAGPILRNRSSSS+
Sbjct: 65  MSA--HTQPIEHIVLFKVKEGIDSSKVNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSS 124

Query: 128 FTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSA 187
           FTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADAL+G +V PPGSA
Sbjct: 125 FTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALQGSLVPPPGSA 184

Query: 188 LRLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFP 247
           LR+T LKLKENLG+EVK +ILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAI P
Sbjct: 185 LRVTFLKLKENLGDEVKGQILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAILP 244

Query: 248 GPNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQTASL 290
           GPNELEAAASD+EMVELQKEKVRE+LESVIVVDYVVPPPQTASL
Sbjct: 245 GPNELEAAASDKEMVELQKEKVREHLESVIVVDYVVPPPQTASL 282

[Close]

BLAST of ClCG11G001480 vs. NCBI nr
Match: gi|659071420|ref|XP_008459729.1| (PREDICTED: uncharacterized protein LOC103498768 [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 6.6e-119
Identity = 231/264 (87.50%), Postives = 246/264 (93.18%), Query Frame = 1


Query: 26  MLSSPLRTFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVNMSAAAHTQPIEHVVLFKVKD 85
           MLSS LRT+STL ++SR+LR RLRL   NP  S RPFSVNMSA  HTQPIEH+VLFKVKD
Sbjct: 1   MLSSALRTWSTLPFSSRNLR-RLRL---NPCHSSRPFSVNMSA--HTQPIEHIVLFKVKD 60

Query: 86  GLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYSA 145
           GLDSSKVNDML GLNGL SLDQVLHLTAGPILRNRSSS TFTHLLHSRYPSKEDLSIYSA
Sbjct: 61  GLDSSKVNDMLNGLNGLNSLDQVLHLTAGPILRNRSSS-TFTHLLHSRYPSKEDLSIYSA 120

Query: 146 HPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSEI 205
           HPAHMNVVKQFVLPICDDIMAVDWVADAL+GP+V  PGSALR+T LKLKENLG+EVK +I
Sbjct: 121 HPAHMNVVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQI 180

Query: 206 LEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKE 265
           LEVIAG+REKLGPNVQLTVG+NFSPARAKGFSIASIAIFPGPNELEAAASD+EMVELQKE
Sbjct: 181 LEVIAGMREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKE 240

Query: 266 KVREYLESVIVVDYVVPPPQTASL 290
           KVRE+LESVIVVDYVVPPP+TASL
Sbjct: 241 KVREHLESVIVVDYVVPPPKTASL 257

[Close]

BLAST of ClCG11G001480 vs. NCBI nr
Match: gi|1009143617|ref|XP_015889360.1| (PREDICTED: uncharacterized protein LOC107424135 [Ziziphus jujuba])

HSP 1 Score: 302.4 bits (773), Expect = 8.7e-79
Identity = 157/243 (64.61%), Postives = 192/243 (79.01%), Query Frame = 1


Query: 55  PSLSFRPFSVNMSAAAH--------TQPIEHVVLFKVKDGLDSSKVNDMLTGLNGLISLD 114
           P+ SF+  S+N S+++         TQ IEHVVLFKVKDG D SKVN M++GL+GLISLD
Sbjct: 30  PARSFKRHSLNSSSSSSFSAKIMSSTQTIEHVVLFKVKDGTDPSKVNAMVSGLSGLISLD 89

Query: 115 QVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMA 174
           QVLHLTAGP+LR RSSS  FTH+LHSRY SKEDLS YS HP H++VVK+ VLPI +DIMA
Sbjct: 90  QVLHLTAGPLLRTRSSSLQFTHILHSRYSSKEDLSAYSQHPNHLSVVKESVLPIVEDIMA 149

Query: 175 VDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSEILEVIAGLREKLGPNVQLTVGE 234
           VDWVA+ L GP+   PGSALR+T LKLKEN+ +  KSEI+ VI G+R+  G   Q++VGE
Sbjct: 150 VDWVAEDLNGPLSPQPGSALRVTFLKLKENVDDGAKSEIVGVIEGIRDSFGQINQISVGE 209

Query: 235 NFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREYLESVIVVDYVVPPPQT 290
           NFSPARAKG+SIAS+A+FPG  +LEA  S+QE+V L K+KVR+ LESV+VVDYVVP  Q+
Sbjct: 210 NFSPARAKGYSIASLAVFPGLGDLEAVDSNQELVNLHKDKVRDRLESVVVVDYVVPTSQS 269

[Close]

BLAST of ClCG11G001480 vs. NCBI nr
Match: gi|694425421|ref|XP_009340437.1| (PREDICTED: uncharacterized protein LOC103932538 [Pyrus x bretschneideri])

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78
Identity = 160/259 (61.78%), Postives = 196/259 (75.68%), Query Frame = 1


Query: 32  RTFSTLSYNSRHLRLRLRLRRPNPSLSFRPFSVNMSAAAHTQP-IEHVVLFKVKDGLDSS 91
           RTFS     S+H+   LR  +P+PS      +++ +A++ TQ  IEH+VLFKVKD  D +
Sbjct: 18  RTFSP----SKHI---LRYSKPSPSRLTPKITMSSAASSATQTVIEHIVLFKVKDDTDPA 77

Query: 92  KVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLSIYSAHPAHM 151
           KV+ M+  LNGL SL+  LHLTA PILR RSS   FTHLLHSRY SK+DLS Y+ HP HM
Sbjct: 78  KVSAMVNNLNGLTSLNLTLHLTASPILRTRSSPFAFTHLLHSRYNSKDDLSAYTVHPGHM 137

Query: 152 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEVKSEILEVIA 211
           +VVK+ VLP+CDDIMAVDWVAD L+GP V PPGSA+RLT LKLKE LGEE KSEIL VI 
Sbjct: 138 SVVKESVLPVCDDIMAVDWVADDLQGPAVPPPGSAIRLTFLKLKEGLGEESKSEILGVIK 197

Query: 212 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 271
           G++E  G   Q++VGENFSPARAKG+SIAS+A+ PG  ELE   S QE+ + +K+KVRE+
Sbjct: 198 GIKESFGEINQISVGENFSPARAKGYSIASLAVLPGAKELEGLDSKQELAKAEKDKVREH 257

Query: 272 LESVIVVDYVVPPPQTASL 290
           LESVIV+DYVV  PQ+ASL
Sbjct: 258 LESVIVLDYVVGSPQSASL 269

[Close]

BLAST of ClCG11G001480 vs. NCBI nr
Match: gi|225444776|ref|XP_002279848.1| (PREDICTED: uncharacterized protein LOC100249118 [Vitis vinifera])

HSP 1 Score: 301.2 bits (770), Expect = 1.9e-78
Identity = 163/268 (60.82%), Postives = 203/268 (75.75%), Query Frame = 1


Query: 26  MLSSPLRT--FSTLSYNSR-HLRLRLRLRRPNPSLSFRPFSVNMSAA-AHTQPIEHVVLF 85
           ML   +RT  FS LS + + HL+       P    S   F + MS++ A +Q IEHVVLF
Sbjct: 1   MLGLKVRTLFFSPLSSSPKPHLK-------PYSLSSPSNFCIRMSSSSASSQIIEHVVLF 60

Query: 86  KVKDGLDSSKVNDMLTGLNGLISLDQVLHLTAGPILRNRSSSSTFTHLLHSRYPSKEDLS 145
           KVKD  + +KV  M++GLNGL SLDQVLHL+AGPI RNRSS   FTH+LHSRY SKEDLS
Sbjct: 61  KVKDETEPAKVAGMMSGLNGLTSLDQVLHLSAGPIHRNRSSMFKFTHMLHSRYSSKEDLS 120

Query: 146 IYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTLLKLKENLGEEV 205
           +YS HP+HM+VVK+ VLPIC+D+MAVDWVAD + GPVV  PGSA+RLT ++L E LG+E 
Sbjct: 121 VYSGHPSHMSVVKELVLPICEDVMAVDWVADNISGPVVPRPGSAMRLTFMRLNEGLGDEE 180

Query: 206 KSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVE 265
           K ++L  +  +++ LG   Q+T GENFSPARAKGFSIASIAIFPG NELEA  S+ E+V+
Sbjct: 181 KEKVLGAVGEIKDCLGSLDQMTYGENFSPARAKGFSIASIAIFPGLNELEALDSNPEVVQ 240

Query: 266 LQKEKVREYLESVIVVDYVVPPPQTASL 290
           LQK+KVR+ L+ VIV+DYVVPPPQ+ASL
Sbjct: 241 LQKDKVRDLLDRVIVLDYVVPPPQSASL 261

The following BLAST results are available for this feature:

BLAST of ClCG11G001480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UP3_ARATH	7.3e-70	55.30	Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana...	[more]
DABB1_ARATH	3.0e-47	50.48	Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thalia...	[more]

BLAST of ClCG11G001480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LET1_CUCSA	1.2e-122	84.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000190 PE=4 SV=1	[more]
F6HGP8_VITVI	3.0e-78	66.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01340 PE=4 SV=...	[more]
A5AMX3_VITVI	1.1e-77	66.82	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041106 PE=4 SV=1	[more]
W9QUV7_9ROSA	1.8e-75	66.22	Uncharacterized protein OS=Morus notabilis GN=L484_027359 PE=4 SV=1	[more]
M5W9H3_PRUPE	5.3e-75	62.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009927mg PE=4 SV=1	[more]

BLAST of ClCG11G001480 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31670.1	4.1e-71	55.30	Stress responsive alpha-beta barrel domain protein	[more]
AT1G51360.1	1.7e-48	50.48	dimeric A/B barrel domainS-protein 1	[more]

BLAST of ClCG11G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778665543\|ref\|XP_011648585.1\|	1.7e-122	84.51	PREDICTED: uncharacterized protein LOC105434531 [Cucumis sativus]	[more]
gi\|659071420\|ref\|XP_008459729.1\|	6.6e-119	87.50	PREDICTED: uncharacterized protein LOC103498768 [Cucumis melo]	[more]
gi\|1009143617\|ref\|XP_015889360.1\|	8.7e-79	64.61	PREDICTED: uncharacterized protein LOC107424135 [Ziziphus jujuba]	[more]
gi\|694425421\|ref\|XP_009340437.1\|	1.1e-78	61.78	PREDICTED: uncharacterized protein LOC103932538 [Pyrus x bretschneideri]	[more]
gi\|225444776\|ref\|XP_002279848.1\|	1.9e-78	60.82	PREDICTED: uncharacterized protein LOC100249118 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011008	Dimeric_a/b-barrel
IPR013097	Dabb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G001480.1	ClCG11G001480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011008	Dimeric alpha-beta barrel	unknown	SSF54909	Dimeric alpha+beta barrel	coord: 186..283 score: 6.08E-12coord: 73..176 score: 4.29
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 187..281 score: 4.5E-11coord: 75..170 score: 2.3
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 75..171 score: 4.7E-20coord: 185..281 score: 0.
IPR013097	Stress responsive alpha-beta barrel	PROFILE	PS51502	S_R_A_B_BARREL	coord: 75..169 score: 24.427coord: 185..279 score: 18
None	No IPR available	GENE3D	G3DSA:3.30.70.900		coord: 73..173 score: 7.2E-27coord: 188..283 score: 9.9
None	No IPR available	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 46..288 score: 1.3E
None	No IPR available	PANTHER	PTHR33178:SF3	SUBFAMILY NOT NAMED	coord: 46..288 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G001480	Csa2G000190	Cucumber (Chinese Long) v2	cuwcgB096
ClCG11G001480	MELO3C004648	Melon (DHL92) v3.5.1	mewcgB372
ClCG11G001480	Cla016857	Watermelon (97103) v1	wcgwmB107
ClCG11G001480	Cla97C11G207860	Watermelon (97103) v2	wcgwmbB065
ClCG11G001480	Bhi06G001383	Wax gourd	wcgwgoB143
ClCG11G001480	CSPI02G00190	Wild cucumber (PI 183967)	cpiwcgB102
ClCG11G001480	Cucsa.117280	Cucumber (Gy14) v1	cgywcgB171
ClCG11G001480	CmaCh05G014180	Cucurbita maxima (Rimu)	cmawcgB689
ClCG11G001480	Lsi11G001620	Bottle gourd (USVL1VR-Ls)	lsiwcgB078
ClCG11G001480	CsGy2G000220	Cucumber (Gy14) v2	cgybwcgB094
ClCG11G001480	MELO3C004648.2	Melon (DHL92) v3.6.1	medwcgB367
ClCG11G001480	Carg10782	Silver-seed gourd	carwcgB0553
ClCG11G001480	CsaV3_2G001200	Cucumber (Chinese Long) v3	cucwcgB112

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G001480	Cucumber (Gy14) v2	cgybwcgB008
ClCG11G001480	Cucumber (Gy14) v2	cgybwcgB494
ClCG11G001480	Melon (DHL92) v3.6.1	medwcgB187
ClCG11G001480	Melon (DHL92) v3.6.1	medwcgB225
ClCG11G001480	Silver-seed gourd	carwcgB0093
ClCG11G001480	Silver-seed gourd	carwcgB0862
ClCG11G001480	Silver-seed gourd	carwcgB0869
ClCG11G001480	Cucumber (Chinese Long) v3	cucwcgB010
ClCG11G001480	Watermelon (97103) v2	wcgwmbB069
ClCG11G001480	Wax gourd	wcgwgoB153
ClCG11G001480	Wax gourd	wcgwgoB187
ClCG11G001480	Watermelon (Charleston Gray)	wcgwcgB010
ClCG11G001480	Watermelon (Charleston Gray)	wcgwcgB064
ClCG11G001480	Cucurbita maxima (Rimu)	cmawcgB047
ClCG11G001480	Cucurbita maxima (Rimu)	cmawcgB093
ClCG11G001480	Cucurbita maxima (Rimu)	cmawcgB144
ClCG11G001480	Cucurbita maxima (Rimu)	cmawcgB315
ClCG11G001480	Cucurbita moschata (Rifu)	cmowcgB039
ClCG11G001480	Cucurbita moschata (Rifu)	cmowcgB084
ClCG11G001480	Cucurbita moschata (Rifu)	cmowcgB128
ClCG11G001480	Cucurbita moschata (Rifu)	cmowcgB695
ClCG11G001480	Wild cucumber (PI 183967)	cpiwcgB013
ClCG11G001480	Wild cucumber (PI 183967)	cpiwcgB562
ClCG11G001480	Cucumber (Chinese Long) v2	cuwcgB008
ClCG11G001480	Melon (DHL92) v3.5.1	mewcgB233
ClCG11G001480	Watermelon (97103) v1	wcgwmB091
ClCG11G001480	Cucurbita pepo (Zucchini)	cpewcgB097
ClCG11G001480	Cucurbita pepo (Zucchini)	cpewcgB135
ClCG11G001480	Cucurbita pepo (Zucchini)	cpewcgB315
ClCG11G001480	Cucurbita pepo (Zucchini)	cpewcgB494
ClCG11G001480	Cucurbita pepo (Zucchini)	cpewcgB586
ClCG11G001480	Cucurbita pepo (Zucchini)	cpewcgB720
ClCG11G001480	Bottle gourd (USVL1VR-Ls)	lsiwcgB355