ClCG10G022020 (gene) Watermelon (Charleston Gray)

NameClCG10G022020
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr10 : 36523806 .. 36524229 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGAGAAAGATCACAAAAATATTATTTTAAAATGGACGGAAGAATGTGTTACCTCAATAATGAGAATTGGTTTGTCATGGTCCCTGAGGGCACATAAAGAGAGAATGCCAATGAATGTTGTGGTTACTGAATTGCAAGCAATTAAAAGCTCCTACCTCAAGTTTAAAAAGGCACGTGGAAGTTCTCATAGACATTTGTTTGCCAAGCTTGTGAGGCAAATGATTGTATTTGGCCAGGAGCAACAGGTTTTCGTTAGAATAATCCACCTTTTAAACTAACAAATTTCAAAGGATGGTGTAATGTTTCTCAATCATAATAATAAAATCCTTGTTTTGTTCTTAGATTAATTAGATTAGCTTTTCAGAATCCCGCCATTCTGATGCGTCTAGCGAGCTTTATCGAATGCAAGCCTATCTTTAG

mRNA sequence

ATGAGCGAGAAAGATCACAAAAATATTATTTTAAAATGGACGGAAGAATGTGTTACCTCAATAATGAGAATTGGTTTGTCATGGTCCCTGAGGGCACATAAAGAGAGAATGCCAATGAATGTTGTGGTTACTGAATTGCAAGCAATTAAAAGCTCCTACCTCAAGTTTAAAAAGGCACGTGGAAGTTCTCATAGACATTTGTTTGCCAAGCTTGTGAGGCAAATGATTGTATTTGGCCAGGAGCAACAGATTAGCTTTTCAGAATCCCGCCATTCTGATGCGTCTAGCGAGCTTTATCGAATGCAAGCCTATCTTTAG

Coding sequence (CDS)

ATGAGCGAGAAAGATCACAAAAATATTATTTTAAAATGGACGGAAGAATGTGTTACCTCAATAATGAGAATTGGTTTGTCATGGTCCCTGAGGGCACATAAAGAGAGAATGCCAATGAATGTTGTGGTTACTGAATTGCAAGCAATTAAAAGCTCCTACCTCAAGTTTAAAAAGGCACGTGGAAGTTCTCATAGACATTTGTTTGCCAAGCTTGTGAGGCAAATGATTGTATTTGGCCAGGAGCAACAGATTAGCTTTTCAGAATCCCGCCATTCTGATGCGTCTAGCGAGCTTTATCGAATGCAAGCCTATCTTTAG

Protein sequence

MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKARGSSHRHLFAKLVRQMIVFGQEQQISFSESRHSDASSELYRMQAYL
BLAST of ClCG10G022020 vs. TrEMBL
Match: A0A0A0LCU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731840 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.1e-17
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKAR 60
            +SE+D K I+ +W EEC+ SIMRIGLS SLR  +ERM M+VVV ELQAIKSSYLKFKKAR
Sbjct: 954  VSEQDCKEIVPRWMEECLVSIMRIGLSCSLREPRERMAMDVVVNELQAIKSSYLKFKKAR 1013

Query: 61   GSSHRHLFAKLVR 74
               HRHL +  +R
Sbjct: 1014 RRFHRHLVSSSLR 1026

BLAST of ClCG10G022020 vs. TrEMBL
Match: A0A0A0L9X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731800 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKAR 60
            MSE+ H+ II ++ EEC+ S+MRIGLS SLRA +ER PMNV+V ELQAIKSSYLKFKK R
Sbjct: 1014 MSEEQHRKIIPRYVEECLVSMMRIGLSCSLRAPRERTPMNVIVNELQAIKSSYLKFKKTR 1073

BLAST of ClCG10G022020 vs. TrEMBL
Match: A0A0A0LFB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731810 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKK 59
            MSE+DHK  +L W EEC+ SI+RIGLS SLR  +ER P+NVV+ ELQ IKSSYLKFKK
Sbjct: 979  MSEEDHKGFVLSWMEECIISILRIGLSCSLRMPRERKPINVVINELQTIKSSYLKFKK 1036

BLAST of ClCG10G022020 vs. TrEMBL
Match: A0A0A0LA88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731830 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-10
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 1

Query: 2    SEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLK 56
            S +DHK I+ +W  EC+ SIMRIGL+ SLRA  ER  M+VVV ELQAIKSSYLK
Sbjct: 960  SGEDHKEIVPRWKVECLVSIMRIGLTCSLRAPSERTSMSVVVNELQAIKSSYLK 1013

BLAST of ClCG10G022020 vs. NCBI nr
Match: gi|700203641|gb|KGN58774.1| (hypothetical protein Csa_3G731840 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKAR 60
            +SE+D K I+ +W EEC+ SIMRIGLS SLR  +ERM M+VVV ELQAIKSSYLKFKKAR
Sbjct: 954  VSEQDCKEIVPRWMEECLVSIMRIGLSCSLREPRERMAMDVVVNELQAIKSSYLKFKKAR 1013

Query: 61   GSSHRHLFAKLVR 74
               HRHL +  +R
Sbjct: 1014 RRFHRHLVSSSLR 1026

BLAST of ClCG10G022020 vs. NCBI nr
Match: gi|778683273|ref|XP_011651869.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKAR 60
            +SE+D K I+ +W EEC+ SIMRIGLS SLR  +ERM M+VVV ELQAIKSSYLKFKKAR
Sbjct: 970  VSEQDCKEIVPRWMEECLVSIMRIGLSCSLREPRERMAMDVVVNELQAIKSSYLKFKKAR 1029

Query: 61   GSSHRHLFAKLVR 74
               HRHL +  +R
Sbjct: 1030 RRFHRHLVSSSLR 1042

BLAST of ClCG10G022020 vs. NCBI nr
Match: gi|778683270|ref|XP_011651868.1| (PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-15
Identity = 46/68 (67.65%), Postives = 52/68 (76.47%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKAR 60
            M E+D K I+  W EEC+ SIM IGLS SLRA +ER PM VVV EL+AIKSSYLKFKKAR
Sbjct: 1270 MREQDLKXIVPIWMEECLVSIMGIGLSCSLRAPRERKPMKVVVNELEAIKSSYLKFKKAR 1329

Query: 61   GSSHRHLF 69
               HRHL+
Sbjct: 1330 RRFHRHLY 1337

BLAST of ClCG10G022020 vs. NCBI nr
Match: gi|778683270|ref|XP_011651868.1| (PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 9.0e-10
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 1

Query: 2   SEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLK 56
           S +DHK I+ +W  EC+ SIMRIGL+ SLRA  ER  M+VVV ELQAIKSSYLK
Sbjct: 917 SGEDHKEIVPRWKVECLVSIMRIGLTCSLRAPSERTSMSVVVNELQAIKSSYLK 970


HSP 2 Score: 87.4 bits (215), Expect = 1.6e-14
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKKAR 60
            MSE+ H+NII ++ EEC+ S+MRIGLS SLRA +ER PMNVVV ELQAIKSSYL+FKK R
Sbjct: 1015 MSEEQHRNIIPRYVEECLVSMMRIGLSCSLRAPRERTPMNVVVNELQAIKSSYLEFKKTR 1074

BLAST of ClCG10G022020 vs. NCBI nr
Match: gi|700203638|gb|KGN58771.1| (hypothetical protein Csa_3G731810 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-14
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 1

Query: 1    MSEKDHKNIILKWTEECVTSIMRIGLSWSLRAHKERMPMNVVVTELQAIKSSYLKFKK 59
            MSE+DHK  +L W EEC+ SI+RIGLS SLR  +ER P+NVV+ ELQ IKSSYLKFKK
Sbjct: 979  MSEEDHKGFVLSWMEECIISILRIGLSCSLRMPRERKPINVVINELQTIKSSYLKFKK 1036

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LCU7_CUCSA9.1e-1765.75Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731840 PE=3 SV=1[more]
A0A0A0L9X2_CUCSA2.5e-1470.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731800 PE=3 SV=1[more]
A0A0A0LFB9_CUCSA2.5e-1468.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731810 PE=3 SV=1[more]
A0A0A0LA88_CUCSA6.3e-1066.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731830 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|700203641|gb|KGN58774.1|1.3e-1665.75hypothetical protein Csa_3G731840 [Cucumis sativus][more]
gi|778683273|ref|XP_011651869.1|1.3e-1665.75PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 ... [more]
gi|778683270|ref|XP_011651868.1|3.2e-1567.65PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-prot... [more]
gi|778683270|ref|XP_011651868.1|9.0e-1066.67PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-prot... [more]
gi|700203638|gb|KGN58771.1|3.5e-1468.97hypothetical protein Csa_3G731810 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G022020.1ClCG10G022020.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG10G022020Cla97C10G205250Watermelon (97103) v2wcgwmbB038
ClCG10G022020Bhi11G001555Wax gourdwcgwgoB093
ClCG10G022020Lsi03G021990Bottle gourd (USVL1VR-Ls)lsiwcgB219
ClCG10G022020CsGy3G029210Cucumber (Gy14) v2cgybwcgB179
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB222
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB385
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB574
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB616
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB617
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB726
ClCG10G022020Cucurbita maxima (Rimu)cmawcgB750
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB207
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB382
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB571
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB617
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB620
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB729
ClCG10G022020Cucurbita moschata (Rifu)cmowcgB752
ClCG10G022020Wild cucumber (PI 183967)cpiwcgB004
ClCG10G022020Wild cucumber (PI 183967)cpiwcgB196
ClCG10G022020Wild cucumber (PI 183967)cpiwcgB283
ClCG10G022020Wild cucumber (PI 183967)cpiwcgB361
ClCG10G022020Wild cucumber (PI 183967)cpiwcgB443
ClCG10G022020Cucumber (Chinese Long) v2cuwcgB004
ClCG10G022020Cucumber (Chinese Long) v2cuwcgB195
ClCG10G022020Cucumber (Chinese Long) v2cuwcgB273
ClCG10G022020Cucumber (Chinese Long) v2cuwcgB345
ClCG10G022020Cucumber (Chinese Long) v2cuwcgB423
ClCG10G022020Melon (DHL92) v3.5.1mewcgB042
ClCG10G022020Melon (DHL92) v3.5.1mewcgB128
ClCG10G022020Melon (DHL92) v3.5.1mewcgB315
ClCG10G022020Melon (DHL92) v3.5.1mewcgB267
ClCG10G022020Melon (DHL92) v3.5.1mewcgB508
ClCG10G022020Watermelon (97103) v1wcgwmB051
ClCG10G022020Watermelon (97103) v1wcgwmB064
ClCG10G022020Watermelon (97103) v1wcgwmB065
ClCG10G022020Watermelon (97103) v1wcgwmB074
ClCG10G022020Watermelon (97103) v1wcgwmB080
ClCG10G022020Cucurbita pepo (Zucchini)cpewcgB056
ClCG10G022020Cucurbita pepo (Zucchini)cpewcgB351
ClCG10G022020Cucurbita pepo (Zucchini)cpewcgB354
ClCG10G022020Cucurbita pepo (Zucchini)cpewcgB422
ClCG10G022020Cucurbita pepo (Zucchini)cpewcgB546
ClCG10G022020Cucurbita pepo (Zucchini)cpewcgB765
ClCG10G022020Bottle gourd (USVL1VR-Ls)lsiwcgB119
ClCG10G022020Bottle gourd (USVL1VR-Ls)lsiwcgB163
ClCG10G022020Bottle gourd (USVL1VR-Ls)lsiwcgB256
ClCG10G022020Cucumber (Gy14) v2cgybwcgB004
ClCG10G022020Cucumber (Gy14) v2cgybwcgB252
ClCG10G022020Cucumber (Gy14) v2cgybwcgB320
ClCG10G022020Cucumber (Gy14) v2cgybwcgB391
ClCG10G022020Melon (DHL92) v3.6.1medwcgB040
ClCG10G022020Melon (DHL92) v3.6.1medwcgB123
ClCG10G022020Melon (DHL92) v3.6.1medwcgB309
ClCG10G022020Melon (DHL92) v3.6.1medwcgB502
ClCG10G022020Silver-seed gourdcarwcgB0147
ClCG10G022020Silver-seed gourdcarwcgB0250
ClCG10G022020Silver-seed gourdcarwcgB0431
ClCG10G022020Silver-seed gourdcarwcgB0540
ClCG10G022020Silver-seed gourdcarwcgB0564
ClCG10G022020Silver-seed gourdcarwcgB0971
ClCG10G022020Cucumber (Chinese Long) v3cucwcgB005
ClCG10G022020Cucumber (Chinese Long) v3cucwcgB199
ClCG10G022020Cucumber (Chinese Long) v3cucwcgB281
ClCG10G022020Cucumber (Chinese Long) v3cucwcgB368
ClCG10G022020Watermelon (97103) v2wcgwmbB041
ClCG10G022020Watermelon (97103) v2wcgwmbB046
ClCG10G022020Watermelon (97103) v2wcgwmbB047
ClCG10G022020Watermelon (97103) v2wcgwmbB051
ClCG10G022020Wax gourdwcgwgoB116
ClCG10G022020Wax gourdwcgwgoB121
ClCG10G022020Wax gourdwcgwgoB127
ClCG10G022020Wax gourdwcgwgoB129
ClCG10G022020Watermelon (Charleston Gray)wcgwcgB049
ClCG10G022020Watermelon (Charleston Gray)wcgwcgB051
ClCG10G022020Watermelon (Charleston Gray)wcgwcgB059
ClCG10G022020Cucumber (Gy14) v1cgywcgB060
ClCG10G022020Cucumber (Gy14) v1cgywcgB245
ClCG10G022020Cucumber (Gy14) v1cgywcgB311
ClCG10G022020Cucumber (Gy14) v1cgywcgB630