ClCG10G019930 (gene) Watermelon (Charleston Gray)

Overview
NameClCG10G019930
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr10 : 34832467 .. 34832687 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATGATGAATTTGAATGCAAAGAAGAATGCGAGGCCATTGCAAAAGATTAATGGTAGAGACGTTTTCTACTTTGACCCATTCTCATGGGGGAGTGTTGCAGCCGAGTAGATGCAATAATGAAGTGTCACATATAGTTGGGATTTAGTCCATATCTAGGGGCTGAATATCTAGGGGTTGTGTTGTGTGATGTTGTGTTAATTATAGTTGGGATTTAG

mRNA sequence

ATGGTTATGATGAATTTGAATGCAAAGAAGAATGCGAGGCCATTGCAAAAGATTAATGGTAGAGACGTTTTCTACTTTGACCCATTCTCATGGGGGAGTGTTGCAGCCGATCCATATCTAGGGGCTGAATATCTAGGGGTTGTGTTGTGTGATGTTGTGTTAATTATAGTTGGGATTTAG

Coding sequence (CDS)

ATGGTTATGATGAATTTGAATGCAAAGAAGAATGCGAGGCCATTGCAAAAGATTAATGGTAGAGACGTTTTCTACTTTGACCCATTCTCATGGGGGAGTGTTGCAGCCGATCCATATCTAGGGGCTGAATATCTAGGGGTTGTGTTGTGTGATGTTGTGTTAATTATAGTTGGGATTTAG

Protein sequence

MVMMNLNAKKNARPLQKINGRDVFYFDPFSWGSVAADPYLGAEYLGVVLCDVVLIIVGI
Homology
[Close]
BLAST of ClCG10G019930 vs. TrEMBL
Match: A0A0A0LEA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743390 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-06
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 1   MVMMNLNAKKNARPLQKINGRDVFYFDPFSWGSVAAD 38
           ++   L  +KNARPLQKINGRDVFYFDPFSW SVAA+
Sbjct: 244 LLQQALVEEKNARPLQKINGRDVFYFDPFSWQSVAAE 280

[Close]
BLAST of ClCG10G019930 vs. NCBI nr
Match: gi|778683942|ref|XP_011651971.1| (PREDICTED: alpha carbonic anhydrase 7-like [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-06
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 1   MVMMNLNAKKNARPLQKINGRDVFYFDPFSWGSVAAD 38
           ++   L  +KNARPLQKINGRDVFYFDPFSW SVAA+
Sbjct: 242 LLQQALVEEKNARPLQKINGRDVFYFDPFSWQSVAAE 278

[Close]
BLAST of ClCG10G019930 vs. NCBI nr
Match: gi|700203869|gb|KGN59002.1| (hypothetical protein Csa_3G743390 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-06
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 1   MVMMNLNAKKNARPLQKINGRDVFYFDPFSWGSVAAD 38
           ++   L  +KNARPLQKINGRDVFYFDPFSW SVAA+
Sbjct: 244 LLQQALVEEKNARPLQKINGRDVFYFDPFSWQSVAAE 280

[Close]
BLAST of ClCG10G019930 vs. NCBI nr
Match: gi|659084138|ref|XP_008442729.1| (PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Cucumis melo])

HSP 1 Score: 57.4 bits (137), Expect = 9.9e-06
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 1 

Query: 9   KKNARPLQKINGRDVFYFDPFSWGSVAAD 38
           +KNARPLQKINGR+VFYFDPFSW SVAA+
Sbjct: 288 EKNARPLQKINGRNVFYFDPFSWQSVAAE 316

The following BLAST results are available for this feature:
BLAST of ClCG10G019930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEA7_CUCSA1.4e-0672.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743390 PE=4 SV=1[more]
BLAST of ClCG10G019930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778683942|ref|XP_011651971.1|2.0e-0672.97PREDICTED: alpha carbonic anhydrase 7-like [Cucumis sativus][more]
gi|700203869|gb|KGN59002.1|2.0e-0672.97hypothetical protein Csa_3G743390 [Cucumis sativus][more]
gi|659084138|ref|XP_008442729.1|9.9e-0686.21PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase ne... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G019930.1ClCG10G019930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG10G019930Cucurbita moschata (Rifu)cmowcgB207
ClCG10G019930Cucurbita moschata (Rifu)cmowcgB383
ClCG10G019930Cucurbita moschata (Rifu)cmowcgB474
ClCG10G019930Cucurbita moschata (Rifu)cmowcgB570
ClCG10G019930Cucurbita moschata (Rifu)cmowcgB729
ClCG10G019930Cucurbita moschata (Rifu)cmowcgB752
ClCG10G019930Wild cucumber (PI 183967)cpiwcgB007
ClCG10G019930Wild cucumber (PI 183967)cpiwcgB196
ClCG10G019930Wild cucumber (PI 183967)cpiwcgB200
ClCG10G019930Wild cucumber (PI 183967)cpiwcgB366
ClCG10G019930Wild cucumber (PI 183967)cpiwcgB444
ClCG10G019930Wild cucumber (PI 183967)cpiwcgB445
ClCG10G019930Cucumber (Chinese Long) v2cuwcgB195
ClCG10G019930Cucumber (Chinese Long) v2cuwcgB426
ClCG10G019930Cucumber (Chinese Long) v2cuwcgB424
ClCG10G019930Melon (DHL92) v3.5.1mewcgB315
ClCG10G019930Melon (DHL92) v3.5.1mewcgB507
ClCG10G019930Watermelon (97103) v1wcgwmB051
ClCG10G019930Watermelon (97103) v1wcgwmB063
ClCG10G019930Watermelon (97103) v1wcgwmB074
ClCG10G019930Watermelon (97103) v1wcgwmB076
ClCG10G019930Cucurbita pepo (Zucchini)cpewcgB058
ClCG10G019930Cucurbita pepo (Zucchini)cpewcgB248
ClCG10G019930Cucurbita pepo (Zucchini)cpewcgB422
ClCG10G019930Cucurbita pepo (Zucchini)cpewcgB546
ClCG10G019930Cucurbita pepo (Zucchini)cpewcgB765
ClCG10G019930Bottle gourd (USVL1VR-Ls)lsiwcgB037
ClCG10G019930Bottle gourd (USVL1VR-Ls)lsiwcgB118
ClCG10G019930Bottle gourd (USVL1VR-Ls)lsiwcgB219
ClCG10G019930Bottle gourd (USVL1VR-Ls)lsiwcgB224
ClCG10G019930Cucumber (Gy14) v2cgybwcgB179
ClCG10G019930Cucumber (Gy14) v2cgybwcgB392
ClCG10G019930Cucumber (Gy14) v2cgybwcgB393
ClCG10G019930Melon (DHL92) v3.6.1medwcgB309
ClCG10G019930Melon (DHL92) v3.6.1medwcgB503
ClCG10G019930Silver-seed gourdcarwcgB0147
ClCG10G019930Silver-seed gourdcarwcgB0240
ClCG10G019930Silver-seed gourdcarwcgB0432
ClCG10G019930Cucumber (Chinese Long) v3cucwcgB199
ClCG10G019930Cucumber (Chinese Long) v3cucwcgB446
ClCG10G019930Cucumber (Chinese Long) v3cucwcgB447
ClCG10G019930Watermelon (97103) v2wcgwmbB038
ClCG10G019930Watermelon (97103) v2wcgwmbB043
ClCG10G019930Watermelon (97103) v2wcgwmbB047
ClCG10G019930Watermelon (97103) v2wcgwmbB052
ClCG10G019930Wax gourdwcgwgoB079
ClCG10G019930Wax gourdwcgwgoB115
ClCG10G019930Wax gourdwcgwgoB119
ClCG10G019930Wax gourdwcgwgoB122
ClCG10G019930Watermelon (Charleston Gray)wcgwcgB044
ClCG10G019930Watermelon (Charleston Gray)wcgwcgB050
ClCG10G019930Watermelon (Charleston Gray)wcgwcgB051
ClCG10G019930Watermelon (Charleston Gray)wcgwcgB060
ClCG10G019930Cucumber (Gy14) v1cgywcgB196
ClCG10G019930Cucumber (Gy14) v1cgywcgB525
ClCG10G019930Cucumber (Gy14) v1cgywcgB529
ClCG10G019930Cucumber (Gy14) v1cgywcgB657
ClCG10G019930Cucurbita maxima (Rimu)cmawcgB222
ClCG10G019930Cucurbita maxima (Rimu)cmawcgB476
ClCG10G019930Cucurbita maxima (Rimu)cmawcgB572
ClCG10G019930Cucurbita maxima (Rimu)cmawcgB726
ClCG10G019930Cucurbita maxima (Rimu)cmawcgB750