ClCG10G017420 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G017420
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RNA binding protein
Location	CG_Chr10 : 32295096 .. 32301980 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAGTCCAGTTTTCAAGCTCTTCTCCAAAGCCCTCAGCTTTGCTATCTCTTCAGCGCCAACCGCGTTTGTTAAACCTTCACAAATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAAACAGCCGGCAACGGTGAAGTTTCTTCCGTCGAACATTTGCGTTCTCTGCTCGAACCGCTTCCCAAACCGCAACTCGTCGATCTCCTTGCTAGACTGTGCGTCTCTTCTCCCTTCTTTATTTAAACAACACTTTCATTTGCACTTCGTTCTTTTTCTTATATGTTTTCGTGAATACTCGTGGCGTTTTTGTTTCTTAGTTCTACTTCTTTTTCGCACCTGGCCTTGCCCTTCTGTTTACTGGGAAAAACGTTGTTGTATGAGATATGGGGTTTAAGAGAATTTGGTAATCAGCCTTAACTCATTTATGCCAGTGTTGCGGATGATCTTTTCTAGGGTTTTGGGTTCTTAGTTTCCATTGTAGTGAATTTTGGAATCTTTTTGGTTCGTAGATGTATGAGGCATTCCCATTGTAAACCACATTTAGGCTCCTTTTGTTAACCAATTGGTCAGCTTTTAAAAAATAAGCCTATAAACACTTATTTCACCTTTTTGTTTTTACCTTTTCTTGCTTTCTTATATACTTTTTACTGACACAAATTTTGAAAACTTAAAAAAAAAGTTTTTAACTTGTTTTTATTTTTGGAATTTGGCTAAGAATTCAATTTGTATCAAGAAAGTTGCAAATCACTATAAGAAATGGAGAGGAAATAGACTTGATCTTCAAAAATAGAAAACAGAAAACGAAATAGTTACCAAATGGGGCCTTAGTAAATATCTTCCCAAGTTTTGGAACGGTCATATTTTATATGGTGGAGTTATTCTTTTCCGAAGCTGTCATCGTGATTGATAAAGAATTCAATGTTACTGTTAGAGAGTTTGTTATATCTTAAAGATAATAGGACTTGCAATTCTAACTGATTGAGATGTGATCGGAAGTTTAGTCTCAATCTGAATACACCGATGTGACCAAATAGCCTTGTTCTAATTGTTTTTTCCTAATTGGGTTGTTAGGGTGCTTCTCCTTGAATCATGCTTGTAGAGATCCCCCCTACTAAGTCCCAACATGTCGGACAGTAAACAGGGATTTTGAGGTATTAAGTTTTGAACTTGGAGCTTGAACCCATAACCTTGGAAGGCATCTCCAAACATTCCCAAGTCTTTACTATTAGTTTTCAACTTGCTTCCTTTGAATTTGTACATGCACATCTTATCTTCTCTTGGCTGCTCCTTTGAAGTCCCATTTCCTCTTTATGCTAGGCCATGAATTGCCCAAGGGCGTTGTCTAACTTTTCTCTAAGGTAGTTATCATAGGTTTTCCCTAAGACATTTTAGCATCCAATGGGTCTCCTTTGTGATGTCCATTATTATTAAGGCCCATTAAAATTAAGGGTTCAGATGTTTTCCTTCTGCCTCGCTCAAGCCCTTTGCCAACCTATTTTCTATAACTGGCATCTGACCTTTTGTATTGCCTCTGCTAGATCTTCCTTTCTTTGGTTTCAACTTTCTTCTTAAAGCTGCATGGTAGTTTCAAGAGATAAACTTTCTGTTCTCATTAACAAAAAAGCGAGAAAGAGATAAACTTGTGCGGATACATGGAAATTTCCTGACCAAGAATGTAGGGTGAGAGACTGTCATTGAATGCATGTCCTCTATGTTTCTACCATGCATGCCTCCAAATTATTTGACGAACTGCTAGTCTTTCTTGCACTCTAAATATTTATTTCCAATCGACTTCAAATACTCTTTACTTCATAAGGACAAAAGAATGATCCCCCAACATAGGAAGAAAACCCCACATCTCACATTGGAAAAAGAAAACCCCCGTCTCGAATTGACCCAGGAAAAAAAAGAAAAAGATCCTCCAATGAGATCATCCTTTGCATTGAGTCATTGTCACATTATTGACTGCTTTTTTTCTTACATCTTAGAAAACCTTTGCCCATGCAATCCTCGTTAACATCTCTTTTTATTGGTTTCCATATTGCACCTAGTTGTTATGAAAACACAACTTTTTTGGAAAGTAATTTGCTTACATTCTACAATATTCCACCCCTCCTTATTTTCTTTGACACGTTTACCTATATCTTGGATCCTTTTACCTTTTTGTGCAATGCAACCTCTTATCCCTTTTTGTGGGGGGTGTCCCATTCACCCTCTTCCCCTTGTTTCTGCAAACTTCATATGGATTCCCATCTTCCATCTTTTCAAAATTCTTTGAACTCAACAAGTTCCAACGCTCCCCTTGCTTGCCTTAGAAACTTAGATTCAACGATGATAATTCAAAACACCAACGTTCTCCTATGTTCCTTCAACTCTATCTCACCACCTAACCTAACAAGATTTATGTCCAAGCTTTGACTCCGCAATTGCTAGAACCTATTGGACCTCCCATCCCTAAACACTATTAAACGAGCATCTAGAGAGAAAAAAGTGAAAAAATGGGTTCAAGTCATGGTAGCCACCTCTTTGGAGTTTAATATTTTATGAGTTTCCTTGGCAACCGGATGTAGTTGGATTAGGTTGTTGTCTTGTGAGAATAGTTGAACTGTGTGCAAGATGAGTTAGGCAGTTACAACTAAGAAGAACAGCAAGAGAGTGAATCAATTGAAAGAACAACCGTGAGTAAGTTTCAACTTTTAGCAATAAGATTTTGTTCTTGGAATGCAAGTCAAACTTAAACTTGACCCACAACCTTTTTGTAAAAAATTCATTAAAAGTCAATTACTGATCTCTTAAATTAATTAAATAGATTTAAAACTAATGGAACAAGTAATTTCGTAATCAATGGAATTGTTTCTTATAAAAAAAACAAATTTAGCCAACTTTACTTTAACATAGCTCAATTGGTATACTTGGTCTCTCAATAACAGCTACCCTGAGGTTGAGTATGCGAATCTTTGGGTGAGTGTAATCAGGAAGAAGCCTTTATGTCTCCGAAATCTAGGCCTTGGCACAGATGCAAACCTCTAGCAAAAAATTATATTTGGTCTCATCATATCTTTGTTCACAGGCCGATGGCTGTTTTGGTTTATGGAGAAGTATTCTTTTTGGTTTTTGATCATAATATGTAATGAATCTAATTTTATAAAGATTAAAACTTATTCGACACTCCTATATATGAGTTGTCTATCATTTTTTGACGAATAATTCATAACTTGAACAAATTTATAATTATGCCTTTAAAAATTTGGGGTAGTTGATTTTTAAAAATTAACCTGATTACACTCACCCAAAGATTCGCATACTCAAAGGTTCGTAGATTCACATACTTTAACATACCCAAAGATTCGCATACAAACTTATAAGTTCAATAATCATAAAAAATGAATTTAAACTCAAAAAAAATTTGTTCAAAAAAAATTCTTGTCTTTATAGTTCTTAAATAAAAACTTTCCTTTGAGAGTAACATCCATTACTAAAACTATGGTAAGAATGACTTTTTGTGGGTATTACTCCGTGGAAATCACAAGGATGTTGCTTCATCAATTGTATGCTGTATGCTGTGTGATTGACATGGTGAATGTGTGTTTATTTGCGTTGCATGTTGAGGCATAAAGAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGTGAGTGCAGTTGGTTGTTGCTTGTGTTTTGCCTGTTGTGTTTGTGATTGTTCTTTAGGCTCTATGTTTCTAGTCCTGGAACGTTAAATCTTGGAATCACTTTCTTTTTTAATAATAATAATTCTCCCGGGCTTCTATCTCCTACTAAGGACAGTGTTCAATTGGTTTTTTTTCTAATAAAGTTGTTATAATTATATCATGCTCAGGCATTTAGCGTGCATGGGGAAATTGAAGAAGGAGCCGTTATTTATGACAAAGCAACAGGAAAGTCCCGTGGATATGGTTTCATTACTTACAAGCACATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGTAAGCACTAAACCCTTTCCAAATGTTGTGGAAATAGTTTCCATTTGATAATATAATTTTGTGGAGTAAAATGTGTGAGAATAGTTCGGAGTTGGGACGGAATGAAGCAGTTAGCATATTTTATTTGGGTTATGAATATAAGGAATTATGAATCCTCTTCTTTTTATAGAGCATCCTATATTCGCTTGAGCGAGTTTCATTTTGATGGTTGCCGTTCTTCCCTTTTCAATTTCCAGTAGGTTCATCGTTTGACGTTTCCAATCATTTTTAATAGTATTTGGTTATTGTTAATGGAAGTTTGGTTTATCATCAAAATTTTAAATAATATTTGGTCTCATGGTCACCAAGCGGCCATCCCTTTGGTTAAGGCCCACGATCTCTCTCTCTCTCTTTGAGTTCAACAAACGTGGGGTCGGGATGGACCATTGACCTTTAAGATGTTTGGTAATTGGTGCCTTGTACACTGAGCTATGCTCGAATCGGCAAGGCCTACAGTCTCTCAATAACAGCTACCCTGAGGTTGAGTATGCGAATCTTTGGGTGAGTGTAATCAGGAAGAAGCCTTTATGTCTCCGAAATCTAGGCCTTGGCACAGATGCAAACCTCTAGCAAAAAATTATATTTGGTCTCATCATATCTTTGTTCACAGGCCGATGGCTGTTTTGGTTTATGGAGAAGTATTCTTTTTGGTTTTTGATCATAATATGTAATGAATCTAATTTTATAAAGATTAAAACTTATTCGACACTCCTATATATGAGTTGTCTATCATTTTTTGACGAATAATTCATAACTTGAACAAATTTATAATTATGCCTTTAAAAATTTGGGGTAGTTGATTGATAGGCTACCCATCTGCAAGCTAAGGATTGATAACATGAACTTTTAACACAGCCATCTCTTCGTTCCAACATATTATAGCTGGTGGTTTTCAATGATATTTCCAAGAGAATTCAAATATTTGTATTTGATCAACAGTTCTTAATTTTAGGGTCGCATGGCTGTCTGCAATCTGGCTTGTGAAGGTCTAAGTGGATCAAGTACAACGCCAGATTTAGCACAGAGGAAGCTATACATTGGCGGTTTATCACCAGATATTACAAGTGAATTATTGCTGAATTTCTTTGGAAGGTATGGTGATATAGAAGAAGGCTCAGTTGCCTATGATAAGGATACAAATGAATCACGGTTAGTAACATTCTTTTCGCATTTCACTGGGATTTTACTTTCTCCGTTGATGTCTACAATTTTTTATCTTATTGGACCCAGTCACGCTGCACCTATAAAACAATTTCCATTTCTTTGTGTGTAGAGGGTTTGGATTTGTTACGTATACAACAGTAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACATTTGGGGTGAGTCTTGCTAATAGGCTATTTGAAATAGACGGTTTAATTTTGGTATTATAGAAGATTCCAATCATTTTAATGCTTAGATATGTGGTAATTTATTTGTCAAGTGAAATGGAAAAAAAGGCAGGAATTGTATAGAACGTTTACTTTAGCCATTCAAGTGCATTAGGATTTAGCACTCTACAAGCCTCTTTCATTTTGCTTAATGAAAAGAATCGGAAAAACTTTCCTTTCCGTTACTTGAGAGGGAGTTATTTGTCCATTTAGAATACATTCTTTGTTTTCATTTGTAAGCATTTCTATAATGTGGTGAGTGGTTGCAGGGAAGGAACATCATTGTGAAGCTCGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTATCCCCAGCTCTTCCTTCTATGCCATATCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGAGGTGTTGCCCCTGTTGGCTATGCTTATCCCCAAGCTCTTACATCATATCCTGCTTCGTATCCTAGTCCTACAACAGCACATGCTTCATATGCGAGCCAACCCCAAATGCCATATCCTCATCAAGTGATTGGAAAGAAAGATGCTCCTGGACTTCACCCAATCGCACCTGCTGGAATGGGAGGCTATCCATACTATATGGCAAAACAATAGCTGCTGATGTGAATCATGGGAGGTGAGTTTCAAAACGTGCTATTGACTTCCTTTACAATTCAGAGTTAGCCTACATGCAAATAATATGTTTGCACCATTTTTCTTATTGGAAAATACACGCACTATAAATTTGTAGGTTTTAGTTTGGACTCAACTTTTAGATTAATGTCAATGGGAAATCTGATGATCTAATTGAAGAAATATTTGCACTGGGTTAAAATGTAGGGGTAGATTTTTTTTCGATGGAGTTAACAGAAAAGTTTAGTTTAGGGGGGAGAATGTTGGGAAATTTGCTATTTCAATAAAAACAGTACAATGGCAATGACGAGTCAGTGACTCAGTATAGACTATGGAGAAACTTTTGCAATTTACATTTTATTATATTGCTTTTTTTAAAAAAAATTGTTTGCCTTTGTGCAACAACGATGCTGCTTATGTTAGTTTTCATTCTCATTCCATTGTTCATGGTTTGCTGGTTTTTGCAGGAACCTCGACATGGGTCAAATGCGCCTCTAGAAATTGGTCGCTGAGATTTGATTGAAATGTAAACATTAAAGGTGACCTGGTGAAATTTTTCCAAATAAACTCTTCATCTTTTTGTACCTTATCTGTGTAATATTATTGCCACCTAGAAATTATGCATACTTGTCATTCTTAGGATTAGGGATAGTTGATTTTGAGCATGGAATATAATGGTGTTAACTATTTGAATATTGAACATATGACAATATTCTTGATATTTATCTTCC

mRNA sequence

GTTGAGTCCAGTTTTCAAGCTCTTCTCCAAAGCCCTCAGCTTTGCTATCTCTTCAGCGCCAACCGCGTTTGTTAAACCTTCACAAATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAAACAGCCGGCAACGGTGAAGTTTCTTCCGTCGAACATTTGCGTTCTCTGCTCGAACCGCTTCCCAAACCGCAACTCGTCGATCTCCTTGCTAGACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGCATTTAGCGTGCATGGGGAAATTGAAGAAGGAGCCGTTATTTATGACAAAGCAACAGGAAAGTCCCGTGGATATGGTTTCATTACTTACAAGCACATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGGTCGCATGGCTGTCTGCAATCTGGCTTGTGAAGGTCTAAGTGGATCAAGTACAACGCCAGATTTAGCACAGAGGAAGCTATACATTGGCGGTTTATCACCAGATATTACAAGTGAATTATTGCTGAATTTCTTTGGAAGGTATGGTGATATAGAAGAAGGCTCAGTTGCCTATGATAAGGATACAAATGAATCACGAGGGTTTGGATTTGTTACGTATACAACAGTAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACATTTGGGGGAAGGAACATCATTGTGAAGCTCGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTATCCCCAGCTCTTCCTTCTATGCCATATCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGAGGTGTTGCCCCTGTTGGCTATGCTTATCCCCAAGCTCTTACATCATATCCTGCTTCGTATCCTAGTCCTACAACAGCACATGCTTCATATGCGAGCCAACCCCAAATGCCATATCCTCATCAAGTGATTGGAAAGAAAGATGCTCCTGGACTTCACCCAATCGCACCTGCTGGAATGGGAGGCTATCCATACTATATGGCAAAACAATAGCTGCTGATGTGAATCATGGGAGGAACCTCGACATGGGTCAAATGCGCCTCTAGAAATTGGTCGCTGAGATTTGATTGAAATGTAAACATTAAAGGTGACCTGGTGAAATTTTTCCAAATAAACTCTTCATCTTTTTGTACCTTATCTGTGTAATATTATTGCCACCTAGAAATTATGCATACTTGTCATTCTTAGGATTAGGGATAGTTGATTTTGAGCATGGAATATAATGGTGTTAACTATTTGAATATTGAACATATGACAATATTCTTGATATTTATCTTCC

Coding sequence (CDS)

ATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAAACAGCCGGCAACGGTGAAGTTTCTTCCGTCGAACATTTGCGTTCTCTGCTCGAACCGCTTCCCAAACCGCAACTCGTCGATCTCCTTGCTAGACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGCATTTAGCGTGCATGGGGAAATTGAAGAAGGAGCCGTTATTTATGACAAAGCAACAGGAAAGTCCCGTGGATATGGTTTCATTACTTACAAGCACATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGGTCGCATGGCTGTCTGCAATCTGGCTTGTGAAGGTCTAAGTGGATCAAGTACAACGCCAGATTTAGCACAGAGGAAGCTATACATTGGCGGTTTATCACCAGATATTACAAGTGAATTATTGCTGAATTTCTTTGGAAGGTATGGTGATATAGAAGAAGGCTCAGTTGCCTATGATAAGGATACAAATGAATCACGAGGGTTTGGATTTGTTACGTATACAACAGTAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACATTTGGGGGAAGGAACATCATTGTGAAGCTCGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTATCCCCAGCTCTTCCTTCTATGCCATATCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGAGGTGTTGCCCCTGTTGGCTATGCTTATCCCCAAGCTCTTACATCATATCCTGCTTCGTATCCTAGTCCTACAACAGCACATGCTTCATATGCGAGCCAACCCCAAATGCCATATCCTCATCAAGTGATTGGAAAGAAAGATGCTCCTGGACTTCACCCAATCGCACCTGCTGGAATGGGAGGCTATCCATACTATATGGCAAAACAATAG

Protein sequence

MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPASYPSPTTAHASYASQPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ

Homology

[Close]

BLAST of ClCG10G017420 vs. Swiss-Prot
Match: UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-47
Identity = 115/305 (37.70%), Postives = 167/305 (54.75%), Query Frame = 1


Query: 1   MEDLKKRKLEE------TAGNGEVS----SVEHLRSLLEPLPKPQLVDLLARLGSQYPSI 60
           M+ +KKRKL+E      T G G +     S +  R ++E     QL+DLL     ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGF 120
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 180
           +T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 ELLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVK 240
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E A+ A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 LA----DSHRNKMMQAQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPAS 291
           LA       +  M QAQ   +     +    G  +P  P+G    +  AY       PA 
Sbjct: 241 LAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPAH 300

[Close]

BLAST of ClCG10G017420 vs. Swiss-Prot
Match: UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.9e-43
Identity = 117/354 (33.05%), Postives = 167/354 (47.18%), Query Frame = 1


Query: 13  AGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGL 72
           +GN E    E ++ LLEP  K Q++ LL     ++  +A  I+ VA  DPV+RK+FV GL
Sbjct: 88  SGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGL 147

Query: 73  AWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEG 132
            W+T +ETL  AF  +GEIE+   ++DK +GKS+GYGFI YK     + ALK P K I  
Sbjct: 148 GWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGS 207

Query: 133 RMAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGR 192
           RM  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF +
Sbjct: 208 RMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSK 267

Query: 193 YGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNI-IVKLADSHR-N 252
           +G+IEEG +  DK T   +GF    Y + E+AK+A+++P KTF G  +   K  D  +  
Sbjct: 268 FGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPG 327

Query: 253 KMMQAQVSPALPSMPY-----------PVAAGYPQPGKPHGGVAP----VGYAYPQALTS 312
           K  Q   +P   + P            P   G+   G P G   P    +  A  QALT+
Sbjct: 328 KQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGHLMAGNPAGMGGPTAQVINPAIGQALTA 387

Query: 313 YPASYP-----SPTTAHASYASQPQMP--YPHQVIGKKDAPGLHPIAPAGMGGY 329
             AS       +P    A   S        P   +G     G   +AP  M GY
Sbjct: 388 LLASQGAGLAFNPAIGQALLGSLGTAAGVNPGNGVGMPTGYGTQAMAPGTMPGY 441

[Close]

BLAST of ClCG10G017420 vs. Swiss-Prot
Match: UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.8e-42
Identity = 93/237 (39.24%), Postives = 134/237 (56.54%), Query Frame = 1


Query: 14  GNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSELLLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y ++E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of ClCG10G017420 vs. Swiss-Prot
Match: UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-23
Identity = 60/131 (45.80%), Postives = 72/131 (54.96%), Query Frame = 1


Query: 22  EHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETL 81
           E LR LL+P  K QLVDL+        SI   +   A  D  +RK+FV GL W TT ETL
Sbjct: 61  EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 120

Query: 82  CAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLAC 141
              F  +GEIEE  V+ DKATGK++G+GF+ +K  +  K ALK P K I  R A C LA 
Sbjct: 121 VGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 180

Query: 142 EGLSGSSTTPD 153
            G + S    D
Sbjct: 181 MGPAASGKGHD 191

HSP 2 Score: 64.7 bits (156), Expect = 2.2e-09
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 1


Query: 152 DLAQRKLYIGGLSPDITSELLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAK 211
           D+  RK+++ GL  + T E L+  F  YG+IEE +V  DK T +++GFGFV + T + AK
Sbjct: 100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 159

Query: 212 KAIDDPDKTFGGRNIIVKLA 232
           +A+ +P K    R    +LA
Sbjct: 160 EALKEPKKRILNRTATCQLA 179

[Close]

BLAST of ClCG10G017420 vs. Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.1e-22
Identity = 80/254 (31.50%), Postives = 116/254 (45.67%), Query Frame = 1


Query: 62  PVNR---KLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 121
           P NR   K+F+ GL W TT ++L   F   GE+ +  V+ D  TG+SRG+GF+T+K+ + 
Sbjct: 157 PFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKC 216

Query: 122 TKAALKAP----SKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLN 181
               +        KII+ + A+     E  +           K+++GG+  D T E   N
Sbjct: 217 VNEVMSKEHHLDGKIIDPKRAIPREEQEKTA-----------KMFVGGVPGDCTEEEFRN 276

Query: 182 FFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLAD-- 241
           FF ++G + + ++  DKDT   RGFGFVTY    A +  +  P  T  G+ + VK A   
Sbjct: 277 FFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPK 336

Query: 242 -SHRNKMMQAQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYA--YPQALTSYPASYPSP 301
            S R+   + Q      + PY     Y Q    +GG+ P   A  Y Q      A    P
Sbjct: 337 ASLRDSHDRHQHGYHGNANPY-----YAQNMNMYGGMTPAMMAQYYRQMQQYMEAMRNMP 394

Query: 302 TTAHASYASQPQMP 304
             A A    QP MP
Sbjct: 397 AAAGAVPYPQPVMP 394

[Close]

BLAST of ClCG10G017420 vs. TrEMBL
Match: A0A0A0LEH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809410 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 1.7e-186
Identity = 324/335 (96.72%), Postives = 328/335 (97.91%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GN E SS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPASYPSPTTAHASYASQP 300
           AQVSPA+PSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDA GLHPI PAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 335

[Close]

BLAST of ClCG10G017420 vs. TrEMBL
Match: A0A067JYJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25525 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 3.1e-143
Identity = 260/337 (77.15%), Postives = 289/337 (85.76%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSV-EHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVAS 60
           MED+KKRK+EE++  GE+S+  EHLRSLL+PL K QLVDLL+RLG+QYPSIAEEIKS+AS
Sbjct: 1   MEDMKKRKMEESSNGGEISTTQEHLRSLLDPLNKSQLVDLLSRLGTQYPSIAEEIKSLAS 60

Query: 61  ADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120
           ADPV+RKLFVRGLAWNTTSETLCAAF VHGEIEEGAVIYDKATGKSRGYGFITYKHMEST
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120

Query: 121 KAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRY 180
           + AL+APSK+I+GRMAVCNLACEGLSG STTPDLAQRKLYIG LSP+ITSELLLNFFGR+
Sbjct: 121 QNALRAPSKLIDGRMAVCNLACEGLSGVSTTPDLAQRKLYIGSLSPEITSELLLNFFGRH 180

Query: 181 GDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMM 240
           G+IEEGSVAYDKDTNESRGFGFVTY TVEAAKKAIDDP KT GGR I+VKLAD+H+ K  
Sbjct: 181 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKTLGGRTIVVKLADTHKGKTA 240

Query: 241 QAQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPA-SYPSPTTAHASYAS 300
           Q Q+ P +  +P P+AAGY QP K H G APVGY+YPQ +TSYPA SYPSP TA A Y  
Sbjct: 241 QTQLPPPVVPVPLPMAAGYTQPVKAHPGPAPVGYSYPQTMTSYPASSYPSPPTAPAPYPP 300

Query: 301 QPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           Q Q+ YP  V  KKD  GL P  P GMGGYPYY+ KQ
Sbjct: 301 QSQISYP-PVAMKKDPLGLSPPTPMGMGGYPYYLPKQ 336

[Close]

BLAST of ClCG10G017420 vs. TrEMBL
Match: A0A061EXD0_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_024877 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.6e-139
Identity = 249/337 (73.89%), Postives = 284/337 (84.27%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MED+KKRK+EE   NGE+S+ E LRSLL+PL K QLVDLL+RLGSQYPSIAEEIKS+AS+
Sbjct: 1   MEDMKKRKMEEMGNNGELSTQEELRSLLDPLAKSQLVDLLSRLGSQYPSIAEEIKSIASS 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPV+RKLFVRGLAWNTTSETLCAAF +HGEIEEGAVIYDK +GKSRGYGFITYKHMES +
Sbjct: 61  DPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKTSGKSRGYGFITYKHMESAQ 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
           +AL+APSK+I+GRMAVCNLACEGLSG+STTPDLAQRKLYIGGLSPD+TSE+LLNFFGR+G
Sbjct: 121 SALRAPSKLIDGRMAVCNLACEGLSGASTTPDLAQRKLYIGGLSPDVTSEILLNFFGRHG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           +IEEGSVAYDKDTNESRGFGFVTY TVEAAKKAIDDP K  GGR IIVKLAD+H+ K +Q
Sbjct: 181 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKILGGRTIIVKLADTHKGKPVQ 240

Query: 241 AQV-SPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPA-SYPSPTTAHASYAS 300
            Q+ + A+  +  P+A  YPQPGK H   AP GY YPQ + SYPA SYPSP  A A Y +
Sbjct: 241 TQLPAAAVVPVALPMAPSYPQPGKAHPTAAPAGYTYPQTIASYPASSYPSPPAAPAPYPT 300

Query: 301 QPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           QP +PY   +  KKD  G+ P  P GMGGYPYY+ KQ
Sbjct: 301 QPLIPYA-PLAAKKDPQGMPPTTPMGMGGYPYYIGKQ 336

[Close]

BLAST of ClCG10G017420 vs. TrEMBL
Match: A0A061EYF3_THECC (RNA-binding family protein isoform 2 OS=Theobroma cacao GN=TCM_024877 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.1e-135
Identity = 249/359 (69.36%), Postives = 284/359 (79.11%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MED+KKRK+EE   NGE+S+ E LRSLL+PL K QLVDLL+RLGSQYPSIAEEIKS+AS+
Sbjct: 1   MEDMKKRKMEEMGNNGELSTQEELRSLLDPLAKSQLVDLLSRLGSQYPSIAEEIKSIASS 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPV+RKLFVRGLAWNTTSETLCAAF +HGEIEEGAVIYDK +GKSRGYGFITYKHMES +
Sbjct: 61  DPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKTSGKSRGYGFITYKHMESAQ 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
           +AL+APSK+I+GRMAVCNLACEGLSG+STTPDLAQRKLYIGGLSPD+TSE+LLNFFGR+G
Sbjct: 121 SALRAPSKLIDGRMAVCNLACEGLSGASTTPDLAQRKLYIGGLSPDVTSEILLNFFGRHG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFG------------------ 240
           +IEEGSVAYDKDTNESRGFGFVTY TVEAAKKAIDDP K  G                  
Sbjct: 181 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKILGVSGQCHYMCSMACLMSDL 240

Query: 241 ----GRNIIVKLADSHRNKMMQAQV-SPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQ 300
               GR IIVKLAD+H+ K +Q Q+ + A+  +  P+A  YPQPGK H   AP GY YPQ
Sbjct: 241 WRRKGRTIIVKLADTHKGKPVQTQLPAAAVVPVALPMAPSYPQPGKAHPTAAPAGYTYPQ 300

Query: 301 ALTSYPA-SYPSPTTAHASYASQPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
            + SYPA SYPSP  A A Y +QP +PY   +  KKD  G+ P  P GMGGYPYY+ KQ
Sbjct: 301 TIASYPASSYPSPPAAPAPYPTQPLIPYA-PLAAKKDPQGMPPTTPMGMGGYPYYIGKQ 358

[Close]

BLAST of ClCG10G017420 vs. TrEMBL
Match: D7TIF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06300 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 3.1e-135
Identity = 255/345 (73.91%), Postives = 286/345 (82.90%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEV-SSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVAS 60
           MEDLKKRKLEE A NG++ SS E L+ LL+PL K QLVDLL++LGSQYPSIAEEIKSVAS
Sbjct: 1   MEDLKKRKLEE-ASNGQISSSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAEEIKSVAS 60

Query: 61  ADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120
           ADPV+RKLFVRGLAWNTTSETLCAAF +HGEIEEGAVI DK TGKSRGYGFITYKHMEST
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMEST 120

Query: 121 KAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRY 180
           ++AL+APSK+I+GRMAVCNLACEGLSG+STTPD AQRKLYIGGL+PD+TSE+LL+FFGR+
Sbjct: 121 QSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVLLSFFGRH 180

Query: 181 GDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMM 240
           G+IEEGSVAYDK+TNESRGFGFVTY TVEAAKKAIDDP K  GGR+IIVKLADSH+ KM+
Sbjct: 181 GEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLADSHKGKMI 240

Query: 241 QAQVSPALPSMPYPVAAGYP-QPGKPHGGVAPVGYAYPQALTSYPASYPSP--------T 300
           QAQ+S A+  +  P+AAGYP QPGKP     PV Y YPQA  +YPA YP P        +
Sbjct: 241 QAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYPA-YPGPPTGPAPYSS 300

Query: 301 TAHASYASQPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           TA A Y SQPQMPY    +  KD  GL P    GMGGYPYY AKQ
Sbjct: 301 TAPAPYPSQPQMPYSSATV-MKDPLGLPPTPTVGMGGYPYYFAKQ 342

[Close]

BLAST of ClCG10G017420 vs. TAIR10
Match: AT3G15010.1 (AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-48
Identity = 115/305 (37.70%), Postives = 167/305 (54.75%), Query Frame = 1


Query: 1   MEDLKKRKLEE------TAGNGEVS----SVEHLRSLLEPLPKPQLVDLLARLGSQYPSI 60
           M+ +KKRKL+E      T G G +     S +  R ++E     QL+DLL     ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGF 120
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 180
           +T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 ELLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVK 240
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E A+ A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 LA----DSHRNKMMQAQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPAS 291
           LA       +  M QAQ   +     +    G  +P  P+G    +  AY       PA 
Sbjct: 241 LAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPAH 300

[Close]

BLAST of ClCG10G017420 vs. TAIR10
Match: AT3G56860.3 (AT3G56860.3 UBP1-associated protein 2A)

HSP 1 Score: 175.6 bits (444), Expect = 5.0e-44
Identity = 117/354 (33.05%), Postives = 167/354 (47.18%), Query Frame = 1


Query: 13  AGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGL 72
           +GN E    E ++ LLEP  K Q++ LL     ++  +A  I+ VA  DPV+RK+FV GL
Sbjct: 88  SGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGL 147

Query: 73  AWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEG 132
            W+T +ETL  AF  +GEIE+   ++DK +GKS+GYGFI YK     + ALK P K I  
Sbjct: 148 GWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGS 207

Query: 133 RMAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGR 192
           RM  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF +
Sbjct: 208 RMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSK 267

Query: 193 YGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNI-IVKLADSHR-N 252
           +G+IEEG +  DK T   +GF    Y + E+AK+A+++P KTF G  +   K  D  +  
Sbjct: 268 FGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPG 327

Query: 253 KMMQAQVSPALPSMPY-----------PVAAGYPQPGKPHGGVAP----VGYAYPQALTS 312
           K  Q   +P   + P            P   G+   G P G   P    +  A  QALT+
Sbjct: 328 KQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGHLMAGNPAGMGGPTAQVINPAIGQALTA 387

Query: 313 YPASYP-----SPTTAHASYASQPQMP--YPHQVIGKKDAPGLHPIAPAGMGGY 329
             AS       +P    A   S        P   +G     G   +AP  M GY
Sbjct: 388 LLASQGAGLAFNPAIGQALLGSLGTAAGVNPGNGVGMPTGYGTQAMAPGTMPGY 441

[Close]

BLAST of ClCG10G017420 vs. TAIR10
Match: AT2G41060.1 (AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 172.2 bits (435), Expect = 5.5e-43
Identity = 93/237 (39.24%), Postives = 134/237 (56.54%), Query Frame = 1


Query: 14  GNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSELLLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y ++E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of ClCG10G017420 vs. TAIR10
Match: AT2G22090.2 (AT2G22090.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 60/131 (45.80%), Postives = 72/131 (54.96%), Query Frame = 1


Query: 22  EHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETL 81
           E LR LL+P  K QLVDL+        SI   +   A  D  +RK+FV GL W TT ETL
Sbjct: 61  EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 120

Query: 82  CAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLAC 141
              F  +GEIEE  V+ DKATGK++G+GF+ +K  +  K ALK P K I  R A C LA 
Sbjct: 121 VGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 180

Query: 142 EGLSGSSTTPD 153
            G + S    D
Sbjct: 181 MGPAASGKGHD 191

HSP 2 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 1


Query: 152 DLAQRKLYIGGLSPDITSELLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAK 211
           D+  RK+++ GL  + T E L+  F  YG+IEE +V  DK T +++GFGFV + T + AK
Sbjct: 100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 159

Query: 212 KAIDDPDKTFGGRNIIVKLA 232
           +A+ +P K    R    +LA
Sbjct: 160 EALKEPKKRILNRTATCQLA 179

[Close]

BLAST of ClCG10G017420 vs. TAIR10
Match: AT1G17640.1 (AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.2e-22
Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 1


Query: 66  KLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKA 125
           KLFV G++W TT+ET    F   GE+ +  ++ D+ TG  RG+GF+T+      +  L+ 
Sbjct: 67  KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126

Query: 126 PSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYGDIEEG 185
              I + ++ +      G   +        RK+++GGL P +  + L N+F  YGDI E 
Sbjct: 127 DHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEH 186

Query: 186 SVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPD-KTFGGRNIIVKLADSHR 236
            + YD  T  SRGFGFVT+ T ++  +   D      G + + +K A+  R
Sbjct: 187 QIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKR 237

HSP 2 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 53  EIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFIT 112
           +IK+V+      RK+FV GL      + L   F V+G+I E  ++YD  TG+SRG+GF+T
Sbjct: 149 DIKAVSKT----RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVT 208

Query: 113 YKHMES 119
           ++  +S
Sbjct: 209 FQTEDS 210

[Close]

BLAST of ClCG10G017420 vs. NCBI nr
Match: gi|659084784|ref|XP_008443071.1| (PREDICTED: UBP1-associated protein 2C-like [Cucumis melo])

HSP 1 Score: 664.5 bits (1713), Expect = 1.0e-187
Identity = 326/335 (97.31%), Postives = 330/335 (98.51%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGE SSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPASYPSPTTAHASYASQP 300
           AQVSPA+PSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDA GLHP+ PAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of ClCG10G017420 vs. NCBI nr
Match: gi|449437591|ref|XP_004136575.1| (PREDICTED: UBP1-associated protein 2C-like [Cucumis sativus])

HSP 1 Score: 659.8 bits (1701), Expect = 2.5e-186
Identity = 324/335 (96.72%), Postives = 328/335 (97.91%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GN E SS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPASYPSPTTAHASYASQP 300
           AQVSPA+PSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDA GLHPI PAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 335

[Close]

BLAST of ClCG10G017420 vs. NCBI nr
Match: gi|802750237|ref|XP_012087749.1| (PREDICTED: UBP1-associated protein 2A-like [Jatropha curcas])

HSP 1 Score: 516.2 bits (1328), Expect = 4.4e-143
Identity = 260/337 (77.15%), Postives = 289/337 (85.76%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSV-EHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVAS 60
           MED+KKRK+EE++  GE+S+  EHLRSLL+PL K QLVDLL+RLG+QYPSIAEEIKS+AS
Sbjct: 1   MEDMKKRKMEESSNGGEISTTQEHLRSLLDPLNKSQLVDLLSRLGTQYPSIAEEIKSLAS 60

Query: 61  ADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120
           ADPV+RKLFVRGLAWNTTSETLCAAF VHGEIEEGAVIYDKATGKSRGYGFITYKHMEST
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120

Query: 121 KAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRY 180
           + AL+APSK+I+GRMAVCNLACEGLSG STTPDLAQRKLYIG LSP+ITSELLLNFFGR+
Sbjct: 121 QNALRAPSKLIDGRMAVCNLACEGLSGVSTTPDLAQRKLYIGSLSPEITSELLLNFFGRH 180

Query: 181 GDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMM 240
           G+IEEGSVAYDKDTNESRGFGFVTY TVEAAKKAIDDP KT GGR I+VKLAD+H+ K  
Sbjct: 181 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKTLGGRTIVVKLADTHKGKTA 240

Query: 241 QAQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPA-SYPSPTTAHASYAS 300
           Q Q+ P +  +P P+AAGY QP K H G APVGY+YPQ +TSYPA SYPSP TA A Y  
Sbjct: 241 QTQLPPPVVPVPLPMAAGYTQPVKAHPGPAPVGYSYPQTMTSYPASSYPSPPTAPAPYPP 300

Query: 301 QPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           Q Q+ YP  V  KKD  GL P  P GMGGYPYY+ KQ
Sbjct: 301 QSQISYP-PVAMKKDPLGLSPPTPMGMGGYPYYLPKQ 336

[Close]

BLAST of ClCG10G017420 vs. NCBI nr
Match: gi|1009161499|ref|XP_015898932.1| (PREDICTED: UBP1-associated protein 2C-like [Ziziphus jujuba])

HSP 1 Score: 513.1 bits (1320), Expect = 3.7e-142
Identity = 250/335 (74.63%), Postives = 287/335 (85.67%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MED+KKRKL ++A + +VS+VE LR+LL+PL KPQLVDLLA+LGSQYPSIA+EI+S+ASA
Sbjct: 1   MEDMKKRKLGDSAADDDVSTVEELRTLLDPLAKPQLVDLLAKLGSQYPSIADEIRSIASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPV+RKLFVRGLAWNTTSETLC AF VHGEIEEGAVIYDKATGKSRGYGFITYKHM+ST+
Sbjct: 61  DPVHRKLFVRGLAWNTTSETLCDAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMDSTQ 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
            ALKAPSK+I+GR+AVCNLACEGLSG+STTPDLAQRKLYIGGLSP++TSE+LLNFFGR+G
Sbjct: 121 KALKAPSKLIDGRLAVCNLACEGLSGTSTTPDLAQRKLYIGGLSPEVTSEMLLNFFGRHG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKD+NESRGFGFVTY TVE+AKKAIDDP KT GGRN+IVKLADSH+ + MQ
Sbjct: 181 DIEEGSVAYDKDSNESRGFGFVTYKTVESAKKAIDDPQKTLGGRNLIVKLADSHKGRTMQ 240

Query: 241 AQVSPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPASYPSPTTAHASYASQP 300
            Q+  A+  M  P+A GYPQPGK H   A VGY YPQ +    +SYPSP TA A +A Q 
Sbjct: 241 TQLPAAMAPMSLPMAGGYPQPGKAHANTASVGYGYPQNMVYPDSSYPSPPTASAPFAMQN 300

Query: 301 QMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           Q+PY  QV  KKD+ GL    P GMGGYPYY+ KQ
Sbjct: 301 QVPYAQQVALKKDSFGLPSTTPMGMGGYPYYIPKQ 335

[Close]

BLAST of ClCG10G017420 vs. NCBI nr
Match: gi|590636844|ref|XP_007028959.1| (RNA-binding family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 503.8 bits (1296), Expect = 2.3e-139
Identity = 249/337 (73.89%), Postives = 284/337 (84.27%), Query Frame = 1


Query: 1   MEDLKKRKLEETAGNGEVSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MED+KKRK+EE   NGE+S+ E LRSLL+PL K QLVDLL+RLGSQYPSIAEEIKS+AS+
Sbjct: 1   MEDMKKRKMEEMGNNGELSTQEELRSLLDPLAKSQLVDLLSRLGSQYPSIAEEIKSIASS 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPV+RKLFVRGLAWNTTSETLCAAF +HGEIEEGAVIYDK +GKSRGYGFITYKHMES +
Sbjct: 61  DPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKTSGKSRGYGFITYKHMESAQ 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSELLLNFFGRYG 180
           +AL+APSK+I+GRMAVCNLACEGLSG+STTPDLAQRKLYIGGLSPD+TSE+LLNFFGR+G
Sbjct: 121 SALRAPSKLIDGRMAVCNLACEGLSGASTTPDLAQRKLYIGGLSPDVTSEILLNFFGRHG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           +IEEGSVAYDKDTNESRGFGFVTY TVEAAKKAIDDP K  GGR IIVKLAD+H+ K +Q
Sbjct: 181 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKILGGRTIIVKLADTHKGKPVQ 240

Query: 241 AQV-SPALPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALTSYPA-SYPSPTTAHASYAS 300
            Q+ + A+  +  P+A  YPQPGK H   AP GY YPQ + SYPA SYPSP  A A Y +
Sbjct: 241 TQLPAAAVVPVALPMAPSYPQPGKAHPTAAPAGYTYPQTIASYPASSYPSPPAAPAPYPT 300

Query: 301 QPQMPYPHQVIGKKDAPGLHPIAPAGMGGYPYYMAKQ 336
           QP +PY   +  KKD  G+ P  P GMGGYPYY+ KQ
Sbjct: 301 QPLIPYA-PLAAKKDPQGMPPTTPMGMGGYPYYIGKQ 336

The following BLAST results are available for this feature:

BLAST of ClCG10G017420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBA2C_ARATH	2.7e-47	37.70	UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1	[more]
UBA2A_ARATH	8.9e-43	33.05	UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1	[more]
UBA2B_ARATH	9.8e-42	39.24	UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1	[more]
UBA1A_ARATH	2.7e-23	45.80	UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2	[more]
YHKF_SCHPO	5.1e-22	31.50	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of ClCG10G017420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEH0_CUCSA	1.7e-186	96.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809410 PE=4 SV=1	[more]
A0A067JYJ7_JATCU	3.1e-143	77.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25525 PE=4 SV=1	[more]
A0A061EXD0_THECC	1.6e-139	73.89	RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_024877 PE=4 SV=1	[more]
A0A061EYF3_THECC	1.1e-135	69.36	RNA-binding family protein isoform 2 OS=Theobroma cacao GN=TCM_024877 PE=4 SV=1	[more]
D7TIF7_VITVI	3.1e-135	73.91	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06300 PE=4 SV=...	[more]

BLAST of ClCG10G017420 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15010.1	1.5e-48	37.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	5.0e-44	33.05	UBP1-associated protein 2A	[more]
AT2G41060.1	5.5e-43	39.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G22090.2	1.5e-24	45.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G17640.1	3.2e-22	32.16	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of ClCG10G017420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084784\|ref\|XP_008443071.1\|	1.0e-187	97.31	PREDICTED: UBP1-associated protein 2C-like [Cucumis melo]	[more]
gi\|449437591\|ref\|XP_004136575.1\|	2.5e-186	96.72	PREDICTED: UBP1-associated protein 2C-like [Cucumis sativus]	[more]
gi\|802750237\|ref\|XP_012087749.1\|	4.4e-143	77.15	PREDICTED: UBP1-associated protein 2A-like [Jatropha curcas]	[more]
gi\|1009161499\|ref\|XP_015898932.1\|	3.7e-142	74.63	PREDICTED: UBP1-associated protein 2C-like [Ziziphus jujuba]	[more]
gi\|590636844\|ref\|XP_007028959.1\|	2.3e-139	73.89	RNA-binding family protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G017420.1	ClCG10G017420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 67..133 score: 1.2E-13coord: 158..226 score: 1.0
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 157..229 score: 2.7E-24coord: 66..138 score: 7.3
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 156..233 score: 17.251coord: 65..156 score: 1
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 56..140 score: 2.7E-21coord: 147..236 score: 1.0
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 53..142 score: 6.72E-21coord: 154..242 score: 1.61
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 2..11 score: 9.5E-61coord: 62..237 score: 9.5E-61coord: 308..333 score: 9.5
None	No IPR available	PANTHER	PTHR24012:SF490	UBP1-ASSOCIATED PROTEIN 2C	coord: 2..11 score: 9.5E-61coord: 62..237 score: 9.5E-61coord: 308..333 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G017420	Csa3G809410	Cucumber (Chinese Long) v2	cuwcgB194
ClCG10G017420	MELO3C009638	Melon (DHL92) v3.5.1	mewcgB315
ClCG10G017420	Cla017531	Watermelon (97103) v1	wcgwmB051
ClCG10G017420	Cla97C10G200290	Watermelon (97103) v2	wcgwmbB038
ClCG10G017420	Bhi11G002198	Wax gourd	wcgwgoB097
ClCG10G017420	CSPI03G36590	Wild cucumber (PI 183967)	cpiwcgB195
ClCG10G017420	Cucsa.242780	Cucumber (Gy14) v1	cgywcgB426
ClCG10G017420	CmaCh14G004280	Cucurbita maxima (Rimu)	cmawcgB222
ClCG10G017420	CmoCh14G004320	Cucurbita moschata (Rifu)	cmowcgB207
ClCG10G017420	Lsi03G017250	Bottle gourd (USVL1VR-Ls)	lsiwcgB219
ClCG10G017420	Cp4.1LG03g03840	Cucurbita pepo (Zucchini)	cpewcgB546
ClCG10G017420	CsGy3G034060	Cucumber (Gy14) v2	cgybwcgB179
ClCG10G017420	MELO3C009638.2	Melon (DHL92) v3.6.1	medwcgB309
ClCG10G017420	Carg03562	Silver-seed gourd	carwcgB0240
ClCG10G017420	CsaV3_3G038940	Cucumber (Chinese Long) v3	cucwcgB199

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G017420	Cucurbita maxima (Rimu)	cmawcgB720
ClCG10G017420	Cucurbita moschata (Rifu)	cmowcgB723
ClCG10G017420	Cucurbita pepo (Zucchini)	cpewcgB767
ClCG10G017420	Cucurbita pepo (Zucchini)	cpewcgB775
ClCG10G017420	Silver-seed gourd	carwcgB0150