ClCG10G016930 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G016930
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	ABC transporter family pleiotropic drug resistance protein
Location	CG_Chr10 : 31643296 .. 31643574 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGCCGCGGCGGTGGAAGATGGCGATGATGTTGAAGATATTGCTTCTCTTTGGGAGTTGATCGAAAGATTGCCGACATTTGAACGATTGAGATCGTCGTTGTTCGATGACAATAGTGGCGGAGGAAAAGCTGAAAAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGGAGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAGAATGATAATCTAAAGCTTTTGAGAAAAGTTAGGGAGAGAATCCACAAGTAA

mRNA sequence

ATGACAGCCGCGGCGGTGGAAGATGGCGATGATGTTGAAGATATTGCTTCTCTTTGGGAGTTGATCGAAAGATTGCCGACATTTGAACGATTGAGATCGTCGTTGTTCGATGACAATAGTGGCGGAGGAAAAGCTGAAAAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGGAGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAGAATGATAATCTAAAGCTTTTGAGAAAAGTTAGGGAGAGAATCCACAAGTAA

Coding sequence (CDS)

ATGACAGCCGCGGCGGTGGAAGATGGCGATGATGTTGAAGATATTGCTTCTCTTTGGGAGTTGATCGAAAGATTGCCGACATTTGAACGATTGAGATCGTCGTTGTTCGATGACAATAGTGGCGGAGGAAAAGCTGAAAAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGGAGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAGAATGATAATCTAAAGCTTTTGAGAAAAGTTAGGGAGAGAATCCACAAGTAA

Protein sequence

MTAAAVEDGDDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHLFIQKLIKHIENDNLKLLRKVRERIHK

Homology

[Close]

BLAST of ClCG10G016930 vs. Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-19
Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = 1


Query: 6   VEDGDDVED----IASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGD 65
           VE+  DV D     A  W  IERLPT +R+RS+L DD   G ++  + GRRVVDVTKLG 
Sbjct: 44  VENDGDVNDHDAEYALQWAEIERLPTVKRMRSTLLDD---GDESMTEKGRRVVDVTKLGA 103

Query: 66  GERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
            ERHL I+KLIKHIENDNLKLL+K+R RI +
Sbjct: 104 VERHLMIEKLIKHIENDNLKLLKKIRRRIDR 131

[Close]

BLAST of ClCG10G016930 vs. Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-19
Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 1


Query: 7  EDGDDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHL 66
          EDG D  + A  W  I+RLPTF+RLRSSL D    G   EK  G++VVDVTKLG  ERHL
Sbjct: 15 EDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYGEG--TEK--GKKVVDVTKLGAMERHL 74

Query: 67 FIQKLIKHIENDNLKLLRKVRERIHK 93
           I+KLIKHIENDNLKLL+K+R R+ +
Sbjct: 75 MIEKLIKHIENDNLKLLKKIRRRMER 96

[Close]

BLAST of ClCG10G016930 vs. Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-19
Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 1


Query: 1   MTAAAVEDGDDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLG 60
           ++A+  +D  D E++ + W  IERLPTF+RLRSSLF++ +G     K+  +RV DVTKLG
Sbjct: 41  LSASQKDDAVDEENMLA-WAAIERLPTFDRLRSSLFEEINGNDANVKR--KRVTDVTKLG 100

Query: 61  DGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
             ERH+FI+K+IKHIE+DNL+LL K+R+RI K
Sbjct: 101 ALERHVFIEKMIKHIEHDNLQLLHKIRKRIDK 129

[Close]

BLAST of ClCG10G016930 vs. Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-14
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1


Query: 10 DDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHLFIQ 69
          DD + + S W  IER PTFER+ ++LF      GK   K  RRV+DV+KL D +R LFI 
Sbjct: 22 DDDDQLRSQWVAIERSPTFERITTALFCKRDEKGK---KSQRRVMDVSKLDDLDRRLFID 81

Query: 70 KLIKHIENDNLKLLRKVRERI 91
           LI+H+ENDN  LL+K+R+RI
Sbjct: 82 DLIRHVENDNHVLLQKIRKRI 99

[Close]

BLAST of ClCG10G016930 vs. Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 10  DDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHLFIQ 69
           DD E++   W  +ERLPTF+R+ ++L   +   GK       RV+DVT+L   ER L I+
Sbjct: 26  DDEEELRLQWATVERLPTFKRVTTALLARDEVSGKG------RVIDVTRLEGAERRLLIE 85

Query: 70  KLIKHIENDNLKLLRKVRERIHK 93
            L+K IE+DNL+LLRK+R+RI K
Sbjct: 86  MLVKQIEDDNLRLLRKIRKRIDK 102

[Close]

BLAST of ClCG10G016930 vs. TrEMBL
Match: A0A0A0KMI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292220 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.8e-24
Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 2   TAAAVEDGDDVEDI-ASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLG 61
           + A++E+  + + I ASLW  +ERLPTFERLRSSLF+D     + ++ GGRRVVDVTKLG
Sbjct: 35  STASLEEEHERDTIDASLWATVERLPTFERLRSSLFEDKREV-EVDENGGRRVVDVTKLG 94

Query: 62  DGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           D ERHLFIQ+LIKHIENDNLKLL K++ERIHK
Sbjct: 95  DVERHLFIQRLIKHIENDNLKLLTKIKERIHK 125

[Close]

BLAST of ClCG10G016930 vs. TrEMBL
Match: A0A068V364_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042803001 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.4e-20
Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 1


Query: 13  EDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHLFIQKLI 72
           E+ A  W  IERLPTFER+RSSLFD N G     K   +RVVDVTKLG  ERHLFI+KLI
Sbjct: 36  EECALQWAAIERLPTFERIRSSLFDVNDGN--EAKTNAKRVVDVTKLGAQERHLFIEKLI 95

Query: 73  KHIENDNLKLLRKVRERIHK 93
           +HIENDNLKLLRK+R+R+ K
Sbjct: 96  RHIENDNLKLLRKIRKRLDK 113

[Close]

BLAST of ClCG10G016930 vs. TrEMBL
Match: A0A0A0LBH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G814320 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.4e-20
Identity = 60/94 (63.83%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 1   MTAAAVEDGDDVEDIASLWELIERLPTFERLRSSLF--DDNSGGGKAEKKGGRRVVDVTK 60
           MT    +D D     ASLW+LI+RLPTFERLR SL   DDNS          R+VVDVTK
Sbjct: 31  MTTTEDDDHDGDVGDASLWKLIDRLPTFERLRWSLLLDDDNSR---------RKVVDVTK 90

Query: 61  LGDGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           LGD ERHLFIQKLI ++ENDNLKLLRKV ER+HK
Sbjct: 91  LGDEERHLFIQKLINNVENDNLKLLRKVNERLHK 115

[Close]

BLAST of ClCG10G016930 vs. TrEMBL
Match: A0A0A0LEL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.5e-20
Identity = 60/93 (64.52%), Postives = 76/93 (81.72%), Query Frame = 1


Query: 2  TAAAVEDGD--DVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKL 61
          +++A EDG+  DVED ASLW  IERLPTF++LRSSLFD  +  G+ +KK  RRVVDVTKL
Sbjct: 5  SSSAEEDGNGSDVED-ASLWAEIERLPTFKQLRSSLFDITNDKGEVKKKR-RRVVDVTKL 64

Query: 62 GDGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           + ER LFI+KLIK+IE+DN+KLL KVR+RIH+
Sbjct: 65 SNEERGLFIKKLIKNIEDDNVKLLTKVRDRIHR 95

[Close]

BLAST of ClCG10G016930 vs. TrEMBL
Match: F6I4H1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00470 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-19
Identity = 54/91 (59.34%), Postives = 72/91 (79.12%), Query Frame = 1


Query: 2   TAAAVEDGDDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGD 61
           ++A+++D D VE+    W  IERLPTFERLRSSLFD+   G + + +G +RVVDVTK+G 
Sbjct: 38  SSASLKD-DAVEEHDLQWTDIERLPTFERLRSSLFDEYDDGSRVDGEG-KRVVDVTKIGA 97

Query: 62  GERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
            ER +FI+KLIKHIENDNL+LL+K+R+RI K
Sbjct: 98  PERRMFIEKLIKHIENDNLRLLQKIRKRIDK 126

[Close]

BLAST of ClCG10G016930 vs. TAIR10
Match: AT2G37280.1 (AT2G37280.1 pleiotropic drug resistance 5)

HSP 1 Score: 96.7 bits (239), Expect = 8.1e-21
Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 1


Query: 7  EDGDDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHL 66
          EDG D  + A  W  I+RLPTF+RLRSSL D    G   EK  G++VVDVTKLG  ERHL
Sbjct: 15 EDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYGEG--TEK--GKKVVDVTKLGAMERHL 74

Query: 67 FIQKLIKHIENDNLKLLRKVRERIHK 93
           I+KLIKHIENDNLKLL+K+R R+ +
Sbjct: 75 MIEKLIKHIENDNLKLLKKIRRRMER 96

[Close]

BLAST of ClCG10G016930 vs. TAIR10
Match: AT3G53480.1 (AT3G53480.1 pleiotropic drug resistance 9)

HSP 1 Score: 96.7 bits (239), Expect = 8.1e-21
Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = 1


Query: 6   VEDGDDVED----IASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGD 65
           VE+  DV D     A  W  IERLPT +R+RS+L DD   G ++  + GRRVVDVTKLG 
Sbjct: 44  VENDGDVNDHDAEYALQWAEIERLPTVKRMRSTLLDD---GDESMTEKGRRVVDVTKLGA 103

Query: 66  GERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
            ERHL I+KLIKHIENDNLKLL+K+R RI +
Sbjct: 104 VERHLMIEKLIKHIENDNLKLLKKIRRRIDR 131

[Close]

BLAST of ClCG10G016930 vs. TAIR10
Match: AT4G15233.2 (AT4G15233.2 ABC-2 and Plant PDR ABC-type transporter family protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1


Query: 10 DDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHLFIQ 69
          DD + + S W  IER PTFER+ ++LF      GK   K  RRV+DV+KL D +R LFI 
Sbjct: 22 DDDDQLRSQWVAIERSPTFERITTALFCKRDEKGK---KSQRRVMDVSKLDDLDRRLFID 81

Query: 70 KLIKHIENDNLKLLRKVRERI 91
           LI+H+ENDN  LL+K+R+RI
Sbjct: 82 DLIRHVENDNHVLLQKIRKRI 99

[Close]

BLAST of ClCG10G016930 vs. TAIR10
Match: AT4G15230.1 (AT4G15230.1 pleiotropic drug resistance 2)

HSP 1 Score: 76.6 bits (187), Expect = 8.7e-15
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 10  DDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGDGERHLFIQ 69
           DD E++   W  +ERLPTF+R+ ++L   +   GK       RV+DVT+L   ER L I+
Sbjct: 26  DDEEELRLQWATVERLPTFKRVTTALLARDEVSGKG------RVIDVTRLEGAERRLLIE 85

Query: 70  KLIKHIENDNLKLLRKVRERIHK 93
            L+K IE+DNL+LLRK+R+RI K
Sbjct: 86  MLVKQIEDDNLRLLRKIRKRIDK 102

[Close]

BLAST of ClCG10G016930 vs. TAIR10
Match: AT4G15215.1 (AT4G15215.1 pleiotropic drug resistance 13)

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-14
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 1


Query: 10 DDVEDIASLWELIERLPTFERLRSSLF---DDNSGGGKAEKKGGRRVVDVTKLGDGERHL 69
          DD E + S W  +ERLPTF+R+ ++L    DD+S            ++DVTKL D ER L
Sbjct: 25 DDEEKLRSQWATVERLPTFKRVTTALLHTGDDSSD-----------IIDVTKLEDAERRL 84

Query: 70 FIQKLIKHIENDNLKLLRKVRERI 91
           I+KL+K IE DNL+LLRK+R+RI
Sbjct: 85 LIEKLVKQIEADNLRLLRKIRKRI 97

[Close]

BLAST of ClCG10G016930 vs. NCBI nr
Match: gi|659114007|ref|XP_008456863.1| (PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like [Cucumis melo])

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-25
Identity = 64/92 (69.57%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 2   TAAAVEDGDDVEDI-ASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLG 61
           +AA+VE+  + + I  SLW  +ERLPTFERLRSSLF+D  G    ++ GGRRVVDVTKLG
Sbjct: 35  SAASVEEEHERDTIDPSLWATVERLPTFERLRSSLFEDVRGVEVDQENGGRRVVDVTKLG 94

Query: 62  DGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           D ERHLFIQ+LIKHIENDNLKLL K+RERIHK
Sbjct: 95  DVERHLFIQRLIKHIENDNLKLLTKIRERIHK 126

[Close]

BLAST of ClCG10G016930 vs. NCBI nr
Match: gi|449445399|ref|XP_004140460.1| (PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 2   TAAAVEDGDDVEDI-ASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLG 61
           + A++E+  + + I ASLW  +ERLPTFERLRSSLF+D     + ++ GGRRVVDVTKLG
Sbjct: 35  STASLEEEHERDTIDASLWATVERLPTFERLRSSLFEDKREV-EVDENGGRRVVDVTKLG 94

Query: 62  DGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           D ERHLFIQ+LIKHIENDNLKLL K++ERIHK
Sbjct: 95  DVERHLFIQRLIKHIENDNLKLLTKIKERIHK 125

[Close]

BLAST of ClCG10G016930 vs. NCBI nr
Match: gi|700195688|gb|KGN50865.1| (hypothetical protein Csa_5G292220 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 2   TAAAVEDGDDVEDI-ASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLG 61
           + A++E+  + + I ASLW  +ERLPTFERLRSSLF+D     + ++ GGRRVVDVTKLG
Sbjct: 35  STASLEEEHERDTIDASLWATVERLPTFERLRSSLFEDKREV-EVDENGGRRVVDVTKLG 94

Query: 62  DGERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           D ERHLFIQ+LIKHIENDNLKLL K++ERIHK
Sbjct: 95  DVERHLFIQRLIKHIENDNLKLLTKIKERIHK 125

[Close]

BLAST of ClCG10G016930 vs. NCBI nr
Match: gi|659084931|ref|XP_008443150.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-22
Identity = 62/91 (68.13%), Postives = 69/91 (75.82%), Query Frame = 1


Query: 2   TAAAVEDGDDVEDIASLWELIERLPTFERLRSSLFDDNSGGGKAEKKGGRRVVDVTKLGD 61
           TA   ED D     ASLW+LI+RLPTFERLR SLF+D++G         R+VVDVTKLGD
Sbjct: 32  TAEDQEDDDGHVGDASLWKLIDRLPTFERLRLSLFEDDNGR--------RKVVDVTKLGD 91

Query: 62  GERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
            ERH FIQKLIK+IENDNLKLLRKV ERIHK
Sbjct: 92  VERHRFIQKLIKNIENDNLKLLRKVNERIHK 114

[Close]

BLAST of ClCG10G016930 vs. NCBI nr
Match: gi|1009116561|ref|XP_015874839.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-20
Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 1


Query: 4   AAVEDGDDVEDIASLWELIERLPTFERLRSSLFD-DNSGGGKAEKKGGRRVVDVTKLGDG 63
           ++ +D  DVE  A  W  IERLPTFER+RSSLFD D+  GG  EK   +RVVDVTKLGD 
Sbjct: 43  SSAKDDADVE-YALQWAAIERLPTFERIRSSLFDKDDEKGGDDEKV--KRVVDVTKLGDE 102

Query: 64  ERHLFIQKLIKHIENDNLKLLRKVRERIHK 93
           ERHLFI+KLIKHIENDNL+LLRK+R RI +
Sbjct: 103 ERHLFIEKLIKHIENDNLELLRKIRNRIDR 129

The following BLAST results are available for this feature:

BLAST of ClCG10G016930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB37G_ARATH	1.4e-19	59.34	ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1	[more]
AB33G_ARATH	1.4e-19	61.63	ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1	[more]
PDR3_TOBAC	3.2e-19	54.35	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1	[more]
AB42G_ARATH	2.4e-14	51.85	ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1	[more]
AB30G_ARATH	1.5e-13	46.99	ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2	[more]

BLAST of ClCG10G016930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMI3_CUCSA	8.8e-24	66.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292220 PE=3 SV=1	[more]
A0A068V364_COFCA	3.4e-20	67.50	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042803001 PE=3 SV=1	[more]
A0A0A0LBH1_CUCSA	3.4e-20	63.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G814320 PE=3 SV=1	[more]
A0A0A0LEL9_CUCSA	4.5e-20	64.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1	[more]
F6I4H1_VITVI	2.9e-19	59.34	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00470 PE=3 SV=...	[more]

BLAST of ClCG10G016930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37280.1	8.1e-21	61.63	pleiotropic drug resistance 5	[more]
AT3G53480.1	8.1e-21	59.34	pleiotropic drug resistance 9	[more]
AT4G15233.2	1.3e-15	51.85	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15230.1	8.7e-15	46.99	pleiotropic drug resistance 2	[more]
AT4G15215.1	1.5e-14	48.81	pleiotropic drug resistance 13	[more]

BLAST of ClCG10G016930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114007\|ref\|XP_008456863.1\|	2.3e-25	69.57	PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like [Cucu...	[more]
gi\|449445399\|ref\|XP_004140460.1\|	1.3e-23	66.30	PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus]	[more]
gi\|700195688\|gb\|KGN50865.1\|	1.3e-23	66.30	hypothetical protein Csa_5G292220 [Cucumis sativus]	[more]
gi\|659084931\|ref\|XP_008443150.1\|	4.0e-22	68.13	PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo]	[more]
gi\|1009116561\|ref\|XP_015874839.1\|	1.0e-20	66.67	PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Ziziphus jujub...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G016930.1	ClCG10G016930.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G016930	MELO3C009688	Melon (DHL92) v3.5.1	mewcgB315
ClCG10G016930	Cla017486	Watermelon (97103) v1	wcgwmB051
ClCG10G016930	CsGy3G034570	Cucumber (Gy14) v2	cgybwcgB179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G016930	Wax gourd	wcgwgoB097
ClCG10G016930	Wax gourd	wcgwgoB125
ClCG10G016930	Cucumber (Gy14) v1	cgywcgB579
ClCG10G016930	Cucurbita maxima (Rimu)	cmawcgB222
ClCG10G016930	Cucurbita maxima (Rimu)	cmawcgB720
ClCG10G016930	Cucurbita moschata (Rifu)	cmowcgB207
ClCG10G016930	Cucurbita moschata (Rifu)	cmowcgB723
ClCG10G016930	Wild cucumber (PI 183967)	cpiwcgB195
ClCG10G016930	Cucumber (Chinese Long) v2	cuwcgB194
ClCG10G016930	Cucurbita pepo (Zucchini)	cpewcgB546
ClCG10G016930	Cucurbita pepo (Zucchini)	cpewcgB767
ClCG10G016930	Bottle gourd (USVL1VR-Ls)	lsiwcgB121
ClCG10G016930	Bottle gourd (USVL1VR-Ls)	lsiwcgB219
ClCG10G016930	Melon (DHL92) v3.6.1	medwcgB309
ClCG10G016930	Silver-seed gourd	carwcgB0150
ClCG10G016930	Silver-seed gourd	carwcgB0240
ClCG10G016930	Cucumber (Chinese Long) v3	cucwcgB199
ClCG10G016930	Watermelon (97103) v2	wcgwmbB038