ClCG10G008150 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTCACTCTTGGCCTTCCAATCGCACCGACCTCGAAGCTATGA ATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTCACTCTTGGCCTTCCAATCGCACCGACCTCGAAGCTATGA ATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTCACTCTTGGCCTTCCAATCGCACCGACCTCGAAGCTATGA MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSELEFTLGLPIAPTSKL
BLAST of ClCG10G008150 vs. Swiss-Prot
Match: AGL92_ARATH (Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana GN=AGL92 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.7e-08 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 1
BLAST of ClCG10G008150 vs. Swiss-Prot
Match: AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.8e-08 Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 1
BLAST of ClCG10G008150 vs. Swiss-Prot
Match: AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana GN=AGL82 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.8e-08 Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 1
BLAST of ClCG10G008150 vs. Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 4.8e-08 Identity = 30/62 (48.39%), Postives = 36/62 (58.06%), Query Frame = 1
BLAST of ClCG10G008150 vs. Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 4.8e-08 Identity = 30/62 (48.39%), Postives = 36/62 (58.06%), Query Frame = 1
BLAST of ClCG10G008150 vs. TrEMBL
Match: A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336070 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.3e-14 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1
BLAST of ClCG10G008150 vs. TrEMBL
Match: A0A0A0LAL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258140 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-11 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 1
BLAST of ClCG10G008150 vs. TrEMBL
Match: A0A059AHB6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02348 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 4.7e-10 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1
BLAST of ClCG10G008150 vs. TrEMBL
Match: W9SAQ3_9ROSA (MADS-box protein OS=Morus notabilis GN=L484_010768 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-09 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 1
BLAST of ClCG10G008150 vs. TrEMBL
Match: M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021970mg PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.0e-09 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1
BLAST of ClCG10G008150 vs. TAIR10
Match: AT5G55690.1 (AT5G55690.1 MADS-box transcription factor family protein) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-10 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1
BLAST of ClCG10G008150 vs. TAIR10
Match: AT5G26580.1 (AT5G26580.1 AGAMOUS-like-34) HSP 1 Score: 61.2 bits (147), Expect = 3.2e-10 Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 1
BLAST of ClCG10G008150 vs. TAIR10
Match: AT1G31640.1 (AT1G31640.1 AGAMOUS-like 92) HSP 1 Score: 58.5 bits (140), Expect = 2.1e-09 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 1
BLAST of ClCG10G008150 vs. TAIR10
Match: AT5G58890.1 (AT5G58890.1 AGAMOUS-like 82) HSP 1 Score: 58.2 bits (139), Expect = 2.7e-09 Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 1
BLAST of ClCG10G008150 vs. TAIR10
Match: AT5G48670.1 (AT5G48670.1 AGAMOUS-like 80) HSP 1 Score: 58.2 bits (139), Expect = 2.7e-09 Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 1
BLAST of ClCG10G008150 vs. NCBI nr
Match: gi|778674258|ref|XP_011650173.1| (PREDICTED: floral homeotic protein DEFICIENS-like [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 7.7e-14 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1
BLAST of ClCG10G008150 vs. NCBI nr
Match: gi|659121915|ref|XP_008460878.1| (PREDICTED: MADS-box protein SOC1-like [Cucumis melo]) HSP 1 Score: 84.3 bits (207), Expect = 1.0e-13 Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of ClCG10G008150 vs. NCBI nr
Match: gi|449455824|ref|XP_004145650.1| (PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-11 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 1
BLAST of ClCG10G008150 vs. NCBI nr
Match: gi|629086694|gb|KCW53051.1| (hypothetical protein EUGRSUZ_J02348 [Eucalyptus grandis]) HSP 1 Score: 71.6 bits (174), Expect = 6.7e-10 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1
BLAST of ClCG10G008150 vs. NCBI nr
Match: gi|702486937|ref|XP_010034675.1| (PREDICTED: MADS-box transcription factor 56-like [Eucalyptus grandis]) HSP 1 Score: 71.6 bits (174), Expect = 6.7e-10 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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