ClCG10G007940 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGTTCAAGGAACTTGGAATAGAAGACACCTTCAAAGACAAAACATATCTAGCCGCTTTCTTGTCCTGTTGGCTGTGTTTTTTCGTGTTCCTGCAAAAGGGAGCTTTCCTTCGTCCAGGAGTTTTTAAAGTTGCTAGCACGATGGCTGATGGGAAGTCTTACAGCCTTGGTATTCCAGTCCTAGCCAATATATATCATGGTCTAGGGCTGATCACTAAAGCTACCAACCCAATTGGACGTATGGACTTTCACTTTCCTATGCATTATGTCCACGGCTAGCTGGCCCATTACTTTAACACGCATTACCTCGTTCCTGTGGATGTGCGGGGTCCTAAGATGGCCAATTTTTCTGGAGAAGGTGGCTCTATCTATTTCGGGGAATACAAAGCTCGAGAGTTAATCCATAGAGGTGCAAACATCCAATGGCACGTGACTATCCAGGGCCGAAATAGGCATGAGCGTTTGGTTGATGATAATGACTTATCGTCCCAACATTCTTACCAAATTTCTAGCATGCGAACCGGTTATGTATCATCCCAATGTGGAGATACCTTGATACTGGAATCATACAGTCCTTATCGATTTGGCGGCAGTTTGGTTTTTATCAACACACTCCTAATGATATAGGGGGAATGCCCCCTGCCGCTACACTTAATAACCACTTGTATTACTTCCGGGTTTGTACGAGACGTAACACATAATCCCAAGTGTTCTTACCAGCTCGCAAGTTGGAGCCACGAAACCATGTTACGTCACAATACCGAAACTGGTGGCTGTCAAAACATGGGAGTTATTTTGAGGATAACATTCATCAACTCGTAAGTAATGCTATTCCTCCCCCATCGCAACCCCAACTACCCAAGAATAAAGGGTCTAACCAAGGTGGCAAACAACTTCTTCTTATTGAAGAAGCGATTTGCCCCATTCAAAACGATGATTTTATTCATGCAGAAGTGAGTCACAGTACTACCAGTGATCATCATTGGAAGAGACCCCCAAAGAAGATGAAAGGATCATGTGATAATAATTTTTTTGAAGGAGTCCCCAGTGCTTCAGGACTCCCTAGTGCAATTATACCCTTGATACGCATGCTTTCTGTTCAAGTTATCTTTTTCTTTTTTTTTTATCAGGTAATTTATTTATTTGTTTGTTTATATTTTTTAGTAGTCTCCCTTGAGTCCACACCTTCAAGAGCTTGCGGAGCTGAACAGTGAAGAATCTTTGATGGGGCCTTATTATTTGGACTCATCCATGGACAAGGTTGGTACTTCTACATTACCAGTAGCTGAAACAATTGAACCGCCCTTACAACCTCGTGCTATTTTAGAGGACATTTGACGCGGCAAAATGAAAGTAGGTAGTGAGAGCGTTGGAGTTTTGAACTCTCCACTTGAAGAAGTTGGTTGTTCTAAAGCCCTCTTCACAGAGAAAATCATGCCTCCTCCTGGTCCGCTAAGAATTTCGGAACCGACTCAACGTGTCTGTAAAAAAACGAATGTTGGGAATCCCGAGGCTTCTCTATACTGTGGCCATGTAGTAGTTTCGAATTTTTATCGACAAGCAGCGCTATCCCTGTAGGAAAGCACTTGGGATAAGATTGTGCGTACTCCATTTGAGCGAGTTCCGGATCTCAGGTCGGAAGTCACAAAGGTATCCTATGGTATTTCGAAGGTTCATGCAGAGAATTTGACTCCGGTTCAAGAGTTTGTGGAGAATTATCTCAAAAGGGTGGAAAATTTCAATTCGCTACAGTCCTCGTATTCCGTGCAATTATCTTCAACCGACAAAGATCATCAATTGGGGGAGAAAACATCTCGTATGAAAGAAACCCTTACTTTGATCGACCAAATGCGAGGAGAAGATCAAACCATTCGAGAGCAGGTTGCGCAGTTAGCCTCAGAAAAGGAGGAATTAGAAGTTAGACTTCAAGAGGTCAAAACCGAATACGGGAAACTTTTGAGTCTGTGTGATGAGAAGAAGGAGGCCTTAGATAAAAGGGAACTTGAAGTCGCCCAGATGCAAGAAGAAATCAATACTCTTGAGAGCACTCCTACTATAACCGATGAAGGTGTCGAGGCTTTTGCTACAATTTGGGACAACATGGAAACTGCACGTGAAGAGTTGAAGAACTTCAAGTGGAGGCTTTGA ATGCGGTTCAAGGAACTTGGAATAGAAGACACCTTCAAAGACAAAACATATCTAGCCGCTTTCTTGTCCTGTTGGCTGTGTTTTTTCGTGTTCCTGCAAAAGGGAGCTTTCCTTCGTCCAGGAGTTTTTAAAGTTGCTAGCACGATGGCTGATGGGAAGTCTTACAGCCTTGGTATTCCACTGGCCCATTACTTTAACACGCATTACCTCGTTCCTGTGGATGTGCGGGGTCCTAAGATGGCCAATTTTTCTGGAGAAGGTGGCTCTATCTATTTCGGGGAATACAAAGCTCGAGAGTTAATCCATAGAGGTGCAAACATCCAATGGCACGTGACTATCCAGGGCCGAAATAGGCATGAGCGTTTGCATGCGAACCGGTTATGTATCATCCCAATGTGGAGATACCTTGATACTGGAATCATACAGTCCTTATCGATTTGGCGGCAGTTTGGTTTTTATCAACACACTCCTAATGATATAGGGGGAATGCCCCCTGCCGCTACACTTAATAACCACTTGTATTACTTCCGGTTGGAGCCACGAAACCATGTTACGTCACAATACCGAAACTGGTGGCTGTCAAAACATGGGAGTTATTTTGAGGATAACATTCATCAACTCGTAAGTAATGCTATTCCTCCCCCATCGCAACCCCAACTACCCAAGAATAAAGGGTCTAACCAAGGTGGCAAACAACTTCTTCTTATTGAAGAAGCGATTTGCCCCATTCAAAACGATGATTTTATTCATGCAGAAGTGAGTCACAGTACTACCAGTGATCATCATTGGAAGAGACCCCCAAAGAAGATGAAAGGATCATGTGATAATAATTTTTTTGAAGGAGTCCCCAGTGCTTCAGGACTCCCTAGTGCAATTATACCCTTGATACGCATGCTTTCTGTTCAATCTCCCTTGAGTCCACACCTTCAAGAGCTTGCGGAGCTGAACAGTGAAGAATCTTTGATGGGGCCTTATTATTTGGACTCATCCATGGACAAGGTTGGTACTTCTACATTACCAGTAGCTGAAACAATTGAACCGCCCTTACAACCTCTTTTGAACTCTCCACTTGAAGAAGTTGGTTGTTCTAAAGCCCTCTTCACAGAGAAAATCATGCCTCCTCCTGGTCCGCTAAGAATTTCGGAACCGACTCAACGTGTCTGTAAAAAAACGAATGTTGGGAATCCCGAGGCTTCTCTATACTGTGGCCATGAAAGCACTTGGGATAAGATTGTGCGTACTCCATTTGAGCGAGTTCCGGATCTCAGGTCGGAAGTCACAAAGGTATCCTATGGTATTTCGAAGGTTCATGCAGAGAATTTGACTCCGGTTCAAGAGTTTGTGGAGAATTATCTCAAAAGGGTGGAAAATTTCAATTCGCTACAGTCCTCGTATTCCGTGCAATTATCTTCAACCGACAAAGATCATCAATTGGGGGAGAAAACATCTCGTATGAAAGAAACCCTTACTTTGATCGACCAAATGCGAGGAGAAGATCAAACCATTCGAGAGCAGGTTGCGCAGTTAGCCTCAGAAAAGGAGGAATTAGAAGTTAGACTTCAAGAGGTCAAAACCGAATACGGGAAACTTTTGAGTCTGTGTGATGAGAAGAAGGAGGCCTTAGATAAAAGGGAACTTGAAGTCGCCCAGATGCAAGAAGAAATCAATACTCTTGAGAGCACTCCTACTATAACCGATGAAGGTGTCGAGGCTTTTGCTACAATTTGGGACAACATGGAAACTGCACGTGAAGAGTTGAAGAACTTCAAGTGGAGGCTTTGA ATGCGGTTCAAGGAACTTGGAATAGAAGACACCTTCAAAGACAAAACATATCTAGCCGCTTTCTTGTCCTGTTGGCTGTGTTTTTTCGTGTTCCTGCAAAAGGGAGCTTTCCTTCGTCCAGGAGTTTTTAAAGTTGCTAGCACGATGGCTGATGGGAAGTCTTACAGCCTTGGTATTCCACTGGCCCATTACTTTAACACGCATTACCTCGTTCCTGTGGATGTGCGGGGTCCTAAGATGGCCAATTTTTCTGGAGAAGGTGGCTCTATCTATTTCGGGGAATACAAAGCTCGAGAGTTAATCCATAGAGGTGCAAACATCCAATGGCACGTGACTATCCAGGGCCGAAATAGGCATGAGCGTTTGCATGCGAACCGGTTATGTATCATCCCAATGTGGAGATACCTTGATACTGGAATCATACAGTCCTTATCGATTTGGCGGCAGTTTGGTTTTTATCAACACACTCCTAATGATATAGGGGGAATGCCCCCTGCCGCTACACTTAATAACCACTTGTATTACTTCCGGTTGGAGCCACGAAACCATGTTACGTCACAATACCGAAACTGGTGGCTGTCAAAACATGGGAGTTATTTTGAGGATAACATTCATCAACTCGTAAGTAATGCTATTCCTCCCCCATCGCAACCCCAACTACCCAAGAATAAAGGGTCTAACCAAGGTGGCAAACAACTTCTTCTTATTGAAGAAGCGATTTGCCCCATTCAAAACGATGATTTTATTCATGCAGAAGTGAGTCACAGTACTACCAGTGATCATCATTGGAAGAGACCCCCAAAGAAGATGAAAGGATCATGTGATAATAATTTTTTTGAAGGAGTCCCCAGTGCTTCAGGACTCCCTAGTGCAATTATACCCTTGATACGCATGCTTTCTGTTCAATCTCCCTTGAGTCCACACCTTCAAGAGCTTGCGGAGCTGAACAGTGAAGAATCTTTGATGGGGCCTTATTATTTGGACTCATCCATGGACAAGGTTGGTACTTCTACATTACCAGTAGCTGAAACAATTGAACCGCCCTTACAACCTCTTTTGAACTCTCCACTTGAAGAAGTTGGTTGTTCTAAAGCCCTCTTCACAGAGAAAATCATGCCTCCTCCTGGTCCGCTAAGAATTTCGGAACCGACTCAACGTGTCTGTAAAAAAACGAATGTTGGGAATCCCGAGGCTTCTCTATACTGTGGCCATGAAAGCACTTGGGATAAGATTGTGCGTACTCCATTTGAGCGAGTTCCGGATCTCAGGTCGGAAGTCACAAAGGTATCCTATGGTATTTCGAAGGTTCATGCAGAGAATTTGACTCCGGTTCAAGAGTTTGTGGAGAATTATCTCAAAAGGGTGGAAAATTTCAATTCGCTACAGTCCTCGTATTCCGTGCAATTATCTTCAACCGACAAAGATCATCAATTGGGGGAGAAAACATCTCGTATGAAAGAAACCCTTACTTTGATCGACCAAATGCGAGGAGAAGATCAAACCATTCGAGAGCAGGTTGCGCAGTTAGCCTCAGAAAAGGAGGAATTAGAAGTTAGACTTCAAGAGGTCAAAACCGAATACGGGAAACTTTTGAGTCTGTGTGATGAGAAGAAGGAGGCCTTAGATAAAAGGGAACTTGAAGTCGCCCAGATGCAAGAAGAAATCAATACTCTTGAGAGCACTCCTACTATAACCGATGAAGGTGTCGAGGCTTTTGCTACAATTTGGGACAACATGGAAACTGCACGTGAAGAGTTGAAGAACTTCAAGTGGAGGCTTTGA MRFKELGIEDTFKDKTYLAAFLSCWLCFFVFLQKGAFLRPGVFKVASTMADGKSYSLGIPLAHYFNTHYLVPVDVRGPKMANFSGEGGSIYFGEYKARELIHRGANIQWHVTIQGRNRHERLHANRLCIIPMWRYLDTGIIQSLSIWRQFGFYQHTPNDIGGMPPAATLNNHLYYFRLEPRNHVTSQYRNWWLSKHGSYFEDNIHQLVSNAIPPPSQPQLPKNKGSNQGGKQLLLIEEAICPIQNDDFIHAEVSHSTTSDHHWKRPPKKMKGSCDNNFFEGVPSASGLPSAIIPLIRMLSVQSPLSPHLQELAELNSEESLMGPYYLDSSMDKVGTSTLPVAETIEPPLQPLLNSPLEEVGCSKALFTEKIMPPPGPLRISEPTQRVCKKTNVGNPEASLYCGHESTWDKIVRTPFERVPDLRSEVTKVSYGISKVHAENLTPVQEFVENYLKRVENFNSLQSSYSVQLSSTDKDHQLGEKTSRMKETLTLIDQMRGEDQTIREQVAQLASEKEELEVRLQEVKTEYGKLLSLCDEKKEALDKRELEVAQMQEEINTLESTPTITDEGVEAFATIWDNMETAREELKNFKWRL
BLAST of ClCG10G007940 vs. Swiss-Prot
Match: SAS6_DANRE (Spindle assembly abnormal protein 6 homolog OS=Danio rerio GN=sass6 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.0e-06 Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 1
BLAST of ClCG10G007940 vs. TrEMBL
Match: E5GCB9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 9.6e-148 Identity = 309/693 (44.59%), Postives = 396/693 (57.14%), Query Frame = 1
BLAST of ClCG10G007940 vs. TrEMBL
Match: M1B2N7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013728 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 9.3e-18 Identity = 73/227 (32.16%), Postives = 103/227 (45.37%), Query Frame = 1
BLAST of ClCG10G007940 vs. TrEMBL
Match: M5WZ22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024192mg PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 6.3e-14 Identity = 150/659 (22.76%), Postives = 256/659 (38.85%), Query Frame = 1
BLAST of ClCG10G007940 vs. TrEMBL
Match: U5G0C3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01240g PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-12 Identity = 68/218 (31.19%), Postives = 87/218 (39.91%), Query Frame = 1
BLAST of ClCG10G007940 vs. TrEMBL
Match: U5FJ03_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s09350g PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12 Identity = 70/218 (32.11%), Postives = 88/218 (40.37%), Query Frame = 1
BLAST of ClCG10G007940 vs. NCBI nr
Match: gi|307136292|gb|ADN34118.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 531.9 bits (1369), Expect = 1.4e-147 Identity = 309/693 (44.59%), Postives = 396/693 (57.14%), Query Frame = 1
BLAST of ClCG10G007940 vs. NCBI nr
Match: gi|778665095|ref|XP_011648484.1| (PREDICTED: uncharacterized protein LOC105434487 [Cucumis sativus]) HSP 1 Score: 160.6 bits (405), Expect = 8.3e-36 Identity = 102/306 (33.33%), Postives = 138/306 (45.10%), Query Frame = 1
BLAST of ClCG10G007940 vs. NCBI nr
Match: gi|778665095|ref|XP_011648484.1| (PREDICTED: uncharacterized protein LOC105434487 [Cucumis sativus]) HSP 1 Score: 45.8 bits (107), Expect = 3.0e-01 Identity = 27/101 (26.73%), Postives = 52/101 (51.49%), Query Frame = 1
HSP 2 Score: 43.1 bits (100), Expect = 1.9e+00 Identity = 49/198 (24.75%), Postives = 84/198 (42.42%), Query Frame = 1
HSP 3 Score: 127.9 bits (320), Expect = 6.0e-26 Identity = 159/656 (24.24%), Postives = 251/656 (38.26%), Query Frame = 1
BLAST of ClCG10G007940 vs. NCBI nr
Match: gi|698477662|ref|XP_009786038.1| (PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]) HSP 1 Score: 119.4 bits (298), Expect = 2.1e-23 Identity = 95/298 (31.88%), Postives = 135/298 (45.30%), Query Frame = 1
BLAST of ClCG10G007940 vs. NCBI nr
Match: gi|848912051|ref|XP_012854345.1| (PREDICTED: uncharacterized protein LOC105973838, partial [Erythranthe guttata]) HSP 1 Score: 109.8 bits (273), Expect = 1.7e-20 Identity = 95/345 (27.54%), Postives = 143/345 (41.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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