ClCG10G007880 (gene) Watermelon (Charleston Gray)

Overview
NameClCG10G007880
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionCytochrome c biogenesis C
LocationCG_Chr10 : 12691728 .. 12692394 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCTTCGCGAGCAAGGAGTGCCACGCACGAGCGAAGCAAAAACAAAGCCAAAGCAGGGGGAATTCTTTGTTAAGGGAAATCCTTTGATTGTGTATTGAATATAGATGCATGTCTTTCTTGTTCCACCAGCTAGGAGCAAATTCTCACATGTCTCTTTCGTTATTACAACCTTCTTTTTTTTATGTCAAAGACCAGAAGCTATGCACAAATTCTCATTGGATCTCAGTTGTTCTTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTAGTATTCTGTATGTACATGTTCCTGCGGCTTGGATGAGTATTCTTATTTATATCATTACGGCTATAAACACTTTCTTGTTCCTATTAACAAAAAGTTCCCTTTTTCTTCGCTCTTCCGAAACCGGTATAGAAATGGGTGCTTTTTTTACATCGTTTACTTTAGTGACTGGGGGTTTCGGGGAAGACCTATGTGAGGCACCTTTTGGGTGTGGGATGCTTGTTTAGTGCACTGTGTTTTCAAAAGCTTCCTTTCGAACCGACTTCTATTTCAATCCGTGTTAGACTGATTGATATACCAATAATCAAGTTTTCAGTCCACTAGTGGAATACATCGCATCAACTTGGGAGCATTAGCAGATCTG

mRNA sequence

ATGCCGCTTCGCGAGCAAGGAGTGCCACGCACGAGCGAAGCAAAAACAAAGCCAAAGCAGGGGGAATTCTTTGTTAAGGGAAATCCTTTGATTACCAGAAGCTATGCACAAATTCTCATTGGATCTCAGTTGTTCTTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTAGTATTCTGTATGTACATGTTCCTGCGGCTTGGATGAGTATTCTTATTTATATCATTACGGCTATAAACACTTTCTTGTTCCTATTAACAAAAAGTTCCCTTTTTCTTCGCTCTTCCGAAACCGGTATAGAAATGGGTGCTTTTTTTACATCGTTTACTTTAGTGACTGGGGGTTTCGGGGAAGACCTATGTGAGGCACCTTTTGGGTGTGGGATGCTTTCCACTAGTGGAATACATCGCATCAACTTGGGAGCATTAGCAGATCTG

Coding sequence (CDS)

ATGCCGCTTCGCGAGCAAGGAGTGCCACGCACGAGCGAAGCAAAAACAAAGCCAAAGCAGGGGGAATTCTTTGTTAAGGGAAATCCTTTGATTACCAGAAGCTATGCACAAATTCTCATTGGATCTCAGTTGTTCTTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTAGTATTCTGTATGTACATGTTCCTGCGGCTTGGATGAGTATTCTTATTTATATCATTACGGCTATAAACACTTTCTTGTTCCTATTAACAAAAAGTTCCCTTTTTCTTCGCTCTTCCGAAACCGGTATAGAAATGGGTGCTTTTTTTACATCGTTTACTTTAGTGACTGGGGGTTTCGGGGAAGACCTATGTGAGGCACCTTTTGGGTGTGGGATGCTTTCCACTAGTGGAATACATCGCATCAACTTGGGAGCATTAGCAGATCTG

Protein sequence

MPLREQGVPRTSEAKTKPKQGEFFVKGNPLITRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAINTFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGFGEDLCEAPFGCGMLSTSGIHRINLGALADL
Homology
[Close]
BLAST of ClCG10G007880 vs. Swiss-Prot
Match: CCMC_ARATH (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsis thaliana GN=CCMC PE=2 SV=4)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 81/96 (84.38%), Postives = 83/96 (86.46%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS LFLTAMAI+LSL VAPLD QQGGNS ILYVHVP AWMSI++YI TAIN
Sbjct: 15  TRSYAQILIGSWLFLTAMAIYLSLGVAPLDFQQGGNSRILYVHVPVAWMSIIVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  L+L SS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLYLCSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. Swiss-Prot
Match: CCMC_MARPO (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia polymorpha GN=CCMC PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.5e-26
Identity = 63/93 (67.74%), Postives = 70/93 (75.27%), Query Frame = 1 

Query: 35  YAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAINTFL 94
           YAQILIG   FLTAMAI+LS+ VAP D QQG N  I+YVHVPAAWMS+LIYI  AI++ L
Sbjct: 18  YAQILIGFCWFLTAMAIYLSIWVAPSDFQQGENYRIIYVHVPAAWMSLLIYIAMAISSVL 77

Query: 95  FLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           FLLTK  LF   S+T  ++GA FT FTLVTGGF
Sbjct: 78  FLLTKHPLFQLFSKTAAKIGALFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. TrEMBL
Match: A0A0D2PZR7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G165900 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-44
Identity = 107/147 (72.79%), Postives = 112/147 (76.19%), Query Frame = 1 

Query: 1   MPLREQGVPRTSEAKTKPKQGEFFVKGNPLI--------------------TRSYAQILI 60
           MPLREQGVP TS AKTK  QGEF V GNPLI                    TRSYA+ILI
Sbjct: 1   MPLREQGVPWTSGAKTK--QGEFLVGGNPLILGQNDHMSVSLLQPFFLMSKTRSYAKILI 60

Query: 61  GSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAINTFLFLLTKS 120
           GS+LFLTAMAI+LSLRVAPLDLQQGGNS I YVHVPAA MSIL+YI TAINTFLFLLTK 
Sbjct: 61  GSRLFLTAMAIYLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAINTFLFLLTKH 120

Query: 121 SLFLRSSETGIEMGAFFTSFTLVTGGF 128
            LFLRSS T IE+GAFFT FTLVTGGF
Sbjct: 121 PLFLRSSGTSIEIGAFFTLFTLVTGGF 145

[Close]
BLAST of ClCG10G007880 vs. TrEMBL
Match: G3EIZ2_CUCSA (Cytochrome c biogenesis C OS=Cucumis sativus GN=ccmC PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-37
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS+LFLTAMAIHLSLRVAPLDLQQGGNS ILYVHVPAA MSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  LFLRSS TG EMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. TrEMBL
Match: A0A060D8H6_9GENT (Cytochrome c maturase subunit C OS=Rhazya stricta GN=ccmC PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS+LFLTAMAIHLSLRVAPLDLQQGGNS I YVHVPAA MSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  LFLRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLFLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. TrEMBL
Match: U5XMR2_ASCSY (Cytochrome c biogenesis C OS=Asclepias syriaca GN=ccmC PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37
Identity = 84/96 (87.50%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS LFLTAMAI+LSLRVAPLD QQGGNS ILYVHVP AWMSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSWLFLTAMAIYLSLRVAPLDFQQGGNSRILYVHVPVAWMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TF FLLTK  LFLRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFFFLLTKHPLFLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. TrEMBL
Match: D5I3D1_CITLA (Cytochrome c biogenesis C OS=Citrullus lanatus GN=ccmC PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37
Identity = 85/96 (88.54%), Postives = 87/96 (90.62%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS LFLTAMAI+LSL VAPLDLQQGGNS ILYVHVP AWMSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSWLFLTAMAIYLSLWVAPLDLQQGGNSRILYVHVPVAWMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  LFLRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLFLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. TAIR10
Match: AT2G07681.1 (AT2G07681.1 Cytochrome C assembly protein)

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-40
Identity = 85/98 (86.73%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 30  LITRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITA 89
           L+TRSYAQILIGS LFLTAMAIHLSL VAPLDLQQGGNS ILYVHVPAA MSI++YI TA
Sbjct: 393 LVTRSYAQILIGSWLFLTAMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATA 452

Query: 90  INTFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           INTFLFLLTK  L+LRSS TGIEMGAFFT FTLVTGGF
Sbjct: 453 INTFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGF 490

[Close]
BLAST of ClCG10G007880 vs. TAIR10
Match: AT2G07771.2 (AT2G07771.2 Cytochrome C assembly protein)

HSP 1 Score: 160.6 bits (405), Expect = 7.8e-40
Identity = 84/96 (87.50%), Postives = 85/96 (88.54%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS LFLTAMAIHLSL VAPLDLQQGGNS ILYVHVPAA MSI++YI TAIN
Sbjct: 15  TRSYAQILIGSWLFLTAMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  L+LRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. TAIR10
Match: ATMG00900.1 (ATMG00900.1 cytochrome C biogenesis 256)

HSP 1 Score: 160.6 bits (405), Expect = 7.8e-40
Identity = 84/96 (87.50%), Postives = 85/96 (88.54%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS LFLTAMAIHLSL VAPLDLQQGGNS ILYVHVPAA MSI++YI TAIN
Sbjct: 15  TRSYAQILIGSWLFLTAMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  L+LRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. NCBI nr
Match: gi|763742287|gb|KJB09786.1| (hypothetical protein B456_001G165900 [Gossypium raimondii])

HSP 1 Score: 186.0 bits (471), Expect = 4.9e-44
Identity = 107/147 (72.79%), Postives = 112/147 (76.19%), Query Frame = 1 

Query: 1   MPLREQGVPRTSEAKTKPKQGEFFVKGNPLI--------------------TRSYAQILI 60
           MPLREQGVP TS AKTK  QGEF V GNPLI                    TRSYA+ILI
Sbjct: 1   MPLREQGVPWTSGAKTK--QGEFLVGGNPLILGQNDHMSVSLLQPFFLMSKTRSYAKILI 60

Query: 61  GSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAINTFLFLLTKS 120
           GS+LFLTAMAI+LSLRVAPLDLQQGGNS I YVHVPAA MSIL+YI TAINTFLFLLTK 
Sbjct: 61  GSRLFLTAMAIYLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAINTFLFLLTKH 120

Query: 121 SLFLRSSETGIEMGAFFTSFTLVTGGF 128
            LFLRSS T IE+GAFFT FTLVTGGF
Sbjct: 121 PLFLRSSGTSIEIGAFFTLFTLVTGGF 145

[Close]
BLAST of ClCG10G007880 vs. NCBI nr
Match: gi|346683378|ref|YP_004849340.1| (cytochrome c biogenesis C [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS+LFLTAMAIHLSLRVAPLDLQQGGNS ILYVHVPAA MSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  LFLRSS TG EMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. NCBI nr
Match: gi|651729746|ref|YP_009041161.1| (cytochrome c maturase subunit C (mitochondrion) [Rhazya stricta])

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-37
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS+LFLTAMAIHLSLRVAPLDLQQGGNS I YVHVPAA MSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  LFLRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLFLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. NCBI nr
Match: gi|224020955|ref|YP_002608188.1| (cytochrome c biogenesis C [Carica papaya])

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-37
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS+LFLTAMAIHLSLRVAPLDLQQGGNS I YVHVPAA MSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TFLFLLTK  LFLRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFLFLLTKHPLFLRSSGTGIEMGAFFTLFTLVTGGF 110

[Close]
BLAST of ClCG10G007880 vs. NCBI nr
Match: gi|557923442|ref|YP_008802496.1| (cytochrome c biogenesis C (mitochondrion) (mitochondrion) [Asclepias syriaca])

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-37
Identity = 84/96 (87.50%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 32  TRSYAQILIGSQLFLTAMAIHLSLRVAPLDLQQGGNSSILYVHVPAAWMSILIYIITAIN 91
           TRSYAQILIGS LFLTAMAI+LSLRVAPLD QQGGNS ILYVHVP AWMSIL+YI TAIN
Sbjct: 15  TRSYAQILIGSWLFLTAMAIYLSLRVAPLDFQQGGNSRILYVHVPVAWMSILVYIATAIN 74

Query: 92  TFLFLLTKSSLFLRSSETGIEMGAFFTSFTLVTGGF 128
           TF FLLTK  LFLRSS TGIEMGAFFT FTLVTGGF
Sbjct: 75  TFFFLLTKHPLFLRSSGTGIEMGAFFTLFTLVTGGF 110

The following BLAST results are available for this feature:
BLAST of ClCG10G007880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCMC_ARATH1.2e-3784.38Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsi... [more]
CCMC_MARPO3.5e-2667.74Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia... [more]
BLAST of ClCG10G007880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2PZR7_GOSRA3.4e-4472.79Uncharacterized protein OS=Gossypium raimondii GN=B456_001G165900 PE=4 SV=1[more]
G3EIZ2_CUCSA1.1e-3789.58Cytochrome c biogenesis C OS=Cucumis sativus GN=ccmC PE=4 SV=1[more]
A0A060D8H6_9GENT1.8e-3789.58Cytochrome c maturase subunit C OS=Rhazya stricta GN=ccmC PE=4 SV=1[more]
U5XMR2_ASCSY1.8e-3787.50Cytochrome c biogenesis C OS=Asclepias syriaca GN=ccmC PE=4 SV=1[more]
D5I3D1_CITLA1.8e-3788.54Cytochrome c biogenesis C OS=Citrullus lanatus GN=ccmC PE=4 SV=1[more]
BLAST of ClCG10G007880 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07681.11.2e-4086.73 Cytochrome C assembly protein[more]
AT2G07771.27.8e-4087.50 Cytochrome C assembly protein[more]
ATMG00900.17.8e-4087.50ATMG00900.1 cytochrome C biogenesis 256[more]
BLAST of ClCG10G007880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|763742287|gb|KJB09786.1|4.9e-4472.79hypothetical protein B456_001G165900 [Gossypium raimondii][more]
gi|346683378|ref|YP_004849340.1|1.5e-3789.58cytochrome c biogenesis C [Cucumis sativus][more]
gi|651729746|ref|YP_009041161.1|2.6e-3789.58cytochrome c maturase subunit C (mitochondrion) [Rhazya stricta][more]
gi|224020955|ref|YP_002608188.1|2.6e-3789.58cytochrome c biogenesis C [Carica papaya][more]
gi|557923442|ref|YP_008802496.1|2.6e-3787.50cytochrome c biogenesis C (mitochondrion) (mitochondrion) [Asclepias syriaca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002541Cyt_c_assembly
IPR003557Cyt_c_biogenesis_CcmC
Vocabulary: Biological Process
TermDefinition
GO:0017004cytochrome complex assembly
GO:0015886heme transport
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0015232heme transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017004 cytochrome complex assembly
biological_process GO:0015886 heme transport
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0020037 heme binding
molecular_function GO:0015232 heme transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G007880.1ClCG10G007880.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002541Cytochrome c assembly proteinPFAMPF01578Cytochrom_C_asmcoord: 40..126
score: 9.
IPR003557Cytochrome c-type biogenesis protein CcmCPRINTSPR01386CCMCBIOGNSIScoord: 59..76
score: 5.0E-18coord: 76..96
score: 5.0E-18coord: 114..134
score: 5.0
NoneNo IPR availablePANTHERPTHR30071HEME EXPORTER PROTEIN Ccoord: 30..127
score: 3.1
NoneNo IPR availablePANTHERPTHR30071:SF7CYTOCHROME C ASSEMBLY PROTEIN-RELATEDcoord: 30..127
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG10G007880Cla97C10G191510Watermelon (97103) v2wcgwmbB038
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG10G007880Silver-seed gourdcarwcgB0914
ClCG10G007880Silver-seed gourdcarwcgB0991
ClCG10G007880Cucumber (Chinese Long) v3cucwcgB194
ClCG10G007880Wax gourdwcgwgoB098
ClCG10G007880Cucumber (Gy14) v1cgywcgB444
ClCG10G007880Cucurbita maxima (Rimu)cmawcgB283
ClCG10G007880Cucurbita maxima (Rimu)cmawcgB614
ClCG10G007880Cucurbita moschata (Rifu)cmowcgB278
ClCG10G007880Wild cucumber (PI 183967)cpiwcgB190
ClCG10G007880Cucumber (Chinese Long) v2cuwcgB189
ClCG10G007880Melon (DHL92) v3.5.1mewcgB416
ClCG10G007880Cucurbita pepo (Zucchini)cpewcgB195
ClCG10G007880Cucurbita pepo (Zucchini)cpewcgB349
ClCG10G007880Bottle gourd (USVL1VR-Ls)lsiwcgB318
ClCG10G007880Cucumber (Gy14) v2cgybwcgB174
ClCG10G007880Melon (DHL92) v3.6.1medwcgB405