ClCG10G007560 (gene) Watermelon (Charleston Gray)

Overview
NameClCG10G007560
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionProtein PXR1
LocationCG_Chr10 : 11274242 .. 11277508 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAAAGTCATTCAGGGGTGGAAAAGAAAATTTTTCTCCATTAGGGCAAACAAAGTTCTCATTAAGAGTGTGATGCAAGCTATTCCAACCTATGCTACGAGCTGCTTCAGGCTCTCTAAAGGTTTCTATTATGATCTTATGAAGATTTGTGCTAAATTTTGGTGGGATGGTTCTGAGGATCAGAGGAAGATCCATTGGTTGAAATGAAAGAAGCTTTGTTATCCGAAGGATATGGGGGATTAAATTTTAAGAACTTAAAATTGTTTAATCAAGCGTTACTAGCTAAACAAGTGTGGAAAATTCTACAGAATCCTTCTTCCTTAGTGGATCTTGTTTTAAATGGTAGGTACTTTCCTCATTGTTATGTGTTAGAAGCCTCCTATCCCCTTTCTAGTTCCTTTTTTTGGAAAGGATTTTGTTGGGTAGGGACTTGATGGTTAGGGATATGCATAAACAAATTGGTGATGGTCAGTCAATTTTGGTTTGAGGATCCATGGGTTCTGAGATCGTCCACTTTCAAGGTATTGTCACAAGGGCCTGTAAATGGGGTTCGAGTGGTGGCTAATCTCCTTTCTCCTTCAAGTTCGTGGAATATCCAAAAATTATGGGAGGCAATGATGTCGGAAGATGTACAGGAAATCCTTCGAATTCCTGTAAATCCAACTAATAGTGCTGATCGTTAGATTTGGCACTATGGTAACAAGGGTGAGTACTCGGTGAAGAGCGACTATAAATGTGCTATTCTTCATAGAATTTTGAGTTGGAGGTACGGGTTGATCGTAGGGTCAACGTGGTGGAATCGTCTTTGGAAGCTTCCTATTCCTACTAAAGTTGCTTTGTTTGTTTGGAAGTCGTGTCATGGGAGTACTACAACATACGGGTATTGCAGTTCGTCCTTGGTGTCAGGTGTGTAGGCGTAAGGAGGAATCCGTGAGTCATGCTCTGTTTGGGTGTAGTCGTGCTAAACGCATCTGGTCGTCTATAATTGGATCGAGATGGACAAATGCTAAGCACTTTAGTTGTCTGGATATGTGGACTAAGATGGGCAGGGTGTTGTCTAATGATGATTTGGCTCGTGCTTGTATCACTGTTAGGGCCATTTGAGGGACCGAAATAAAGTTGTTCATTCAGCTCTTATCCCTTCGGTGGAGGACCATTGTGATTGGATTGTTGACTACCTAAATAGTTTTGGTAAGATCCATTTTGAGCCTTTGTTCATAGATTCCTATCAATGCTAGGTATGATTTATTGGATAAAAATCTTAACATTATTTATTGTAGTGTTGCTTTTAAACTTGGTGATCACATAGTGGAAACTAGTGTAGTTGTTGGTTCGCCGTTAGGCAAGATCTTAGCCTCCTTGAGTGGGTTCAGAGATTTCTTTGTAAATGTTTTATGTGTTGAAGCTTTTGTTGTTTTTTAGGGGCTTCATTTGGCTGAAAGAAGGAGTATTTCTCATTTGTTAATTTTGTTTGATTCATTGGTGTTGGTTCAGATTTTGGAAGGCATTTTAGCATGCCAGGTCGAAGTGGTAGATTATATTGTTGATATCAAACAAATTGCTTCTTCCTTTGCTTCTGTGTCCTTTCAACATGTGCATCGATCTTATAACTTGGCAGCTCATAGGTTGGCTCAAGTTGGTTTGTCAGGAAGATGGGAGTTGTGCTTGAATAATTTTCCAGTTCATCTGGTGGATTTGTATTCTAGTGACTTTGCTTTCCTTGTTGTCCATTGTGGAGCTTAGTTTTCCTTCTAGTTCGTTGCGTCTAAAAATAATAATTAAAAATTTTACTTTAAGCAATTAATTTTAATTAAATAATAAAAAGTAATATATATTAATAAACAATATACACAAATTAATGTAAGAAAAAAAAAGAGCAAAATATGATATGTTTTAAAGTCAATAAGAAAGATTTGAAAAATGTTAGAAAATCATAATGAATGATTTTATGAAAATAAAATCCGGATAAATGATTCTTTATTATTTAAAAAAAAAAAAGTTAAATCATAAGTATTGAAAATTGAATTTTCATACTAAATTTAACTAATCCTATTTTAAAATAGAGGTGGAGGAATCCATAAGTTTATTGATAGTGGTAGAATTTTAAATGATTTACCTTTTTCGAGGCAAAACACATTTCTCCACAAATTGTTTCTGATTTGTGGGTTCATTTCTAGAAGTAATTTAGTTAATTAAATATACAGCTGAAATTAGATCATTTGTTCAATTATTTATTTTTATAGTCCTCTTCTTTTCTTTTTCTTTTTCTTTTTTCGCAAACCGTCTTTTAATTATTATTATTATTATTGGATAAATTCATTTTCTTTTCATTCCTATTATTATGGGTAAACTACTTTCATATAATTAATACACACCAATAGCTTTTAACTTATATCTACCTATTTCAGTTATCTCAAAAGAAGAAATAATATTAATAATAACAATAATAAGTTATTATGTACCATGTACCATTTTAGGCAAGCTATATATACCTATTTCAAAAGGAGTGATTCCAAGTTAAGCATGTTTGTTTGTTTGTTTTGTTTTCTTTTTTTTTCTTTAAGTAACTTTTTTTTTAAAAAAATATTATTTTAATAAATAATGACAAAAATGGGATAGAGGTAAAACTATTTTCAAAAATAGGTGGACATCCACGATTTCATAAAATTAGCCCACATGGCATGCAAATTGTGGACCTGGTCCACGATTTTGCTTACATGTTTCAGTCAACTCTGCCATAACTGCCACACTGCCATGCGCCACAACCACCACTCTGCCATGCTCTCTTGCTCTCGCTCGTCTCCTTCCTTCCTCACTTAGTCTTATCTCTCTCACTCTCTCTCACTCTCGCTCTCGCTCTCCCTTGTCTCGCTCGTCTCCTTCCTTTCCTCACTCACAGTCTTATCTCTCTCACTCTCTCTCACTCTCTCTCGCTCTCGCTTGTCTCGCTTGTCGCGCTCTTGCTCGTCTCCTTCCTTTTCTCACTCACAATCTTATCTCTCTCGCTCTCGCTTGTCTCGCTTCCTTTCCTCACTCACAATCAGTCTTATCTCTCTCGCTCTCTCGCTCTCGCTCACAGAAGTTGGTCGCATCGAAGAAAAAAAGAAGCTAGAGAAGACTTTGGAGAAGAAGAAGATGCATGAGAAGAAGAAGAAAGAAAAAGAAAAGAAAGAAAGAAAGGGACAGAAAGGGAGTCACGATTTGCAGGAGAAGAGAAAAAAGAAAAAAAAAAGAAAGAGAGAGAAGAAAACCCGATCAACGTAG

mRNA sequence

ATGTGTAAAGTCATTCAGGGGTGGAAAAGAAAATTTTTCTCCATTAGGGCAAACAAAGTTCTCATTAAGAGTGTGATGCAAGCTATTCCAACCTATGCTACGAGCTGCTTCAGGCTCTCTAAAGGATCAGAGGAAGATCCATTGGTTGAAATGAAAGAAGCTTTGTTATCCGAAGGATATGGGGGATTAAATTTTAAGAACTTAAAATTGTTTAATCAAGCGTTACTAGCTAAACAAGATCCATGGGTTCTGAGATCGTCCACTTTCAAGGTATTGTCACAAGGGCCTGTAAATGGGGTTCGAGTGGTGGCTAATCTCCTTTCTCCTTCAAGTTCGTGGAATATCCAAAAATTATGGGAGGCAATGATGTCGGAAGATGTACAGGAAATCCTTCGAATTCCTGGTGAGTACTCGGTGAAGAGCGACTATAAATGTGCTATTCTTCATAGAATTTTGAGTTGGAGGTACGGGTTGATCGTAGGGTCAACGTGGTGGAATCGTCTTTGGAAGCTTCCTATTCCTACTAAAGTTGCTTTGTTTGTTTGGAAGTCGTGTCATGGGAGTACTACAACATACGGGCGTAAGGAGGAATCCGTGAGTCATGCTCTGTTTGGGTGTAGTCGTGCTAAACGCATCTGGTCGTCTATAATTGGATCGAGATGGACAAATGCTAAGCACTTTAGTTGTCTGGATATGTGGACTAAGATGGGCAGGGTGTTGTCTAATGATGATTTGGCTCGTGCTTGTATCACTATTCCTATCAATGCTAGGTATGATTTATTGGATAAAAATCTTAACATTATTTATTGTAGTGTTGCTTTTAAACTTGGTGATCACATAGTGGAAACTAGTGTAGTTGTTGGTTCGCCGTTAGGCAAGATCTTAGCCTCCTTGAGTGGGTTCAGAGATTTCTTTGGGCTTCATTTGGCTGAAAGAAGGAGTATTTCTCATTTGTTAATTTTGTTTGATTCATTGGTGTTGGTTCAGATTTTGGAAGGCATTTTAGCATGCCAGGTCGAAGTGGTAGATTATATTGTTGATATCAAACAAATTGCTTCTTCCTTTGCTTCTGTGTCCTTTCAACATGTGCATCGATCTTATAACTTGGCAGCTCATAGGTTGGCTCAAGTTGGTTTGTCAGGAAGATGGGAGTTGTGCTTGAATAATTTTCCAGTTCATCTGGTGGATTTGTATTCTATCAACTCTGCCATAACTGCCACACTGCCATGCGCCACAACCACCACTCTGCCATGCTCTCTTGCTCTCGCTCAAGTTGGTCGCATCGAAGAAAAAAAGAAGCTAGAGAAGACTTTGGAGAAGAAGAAGATGCATGAGAAGAAGAAGAAAGAAAAAGAAAAGAAAGAAAGAAAGGGACAGAAAGGGAGTCACGATTTGCAGGAGAAGAGAAAAAAGAAAAAAAAAAGAAAGAGAGAGAAGAAAACCCGATCAACGTAG

Coding sequence (CDS)

ATGTGTAAAGTCATTCAGGGGTGGAAAAGAAAATTTTTCTCCATTAGGGCAAACAAAGTTCTCATTAAGAGTGTGATGCAAGCTATTCCAACCTATGCTACGAGCTGCTTCAGGCTCTCTAAAGGATCAGAGGAAGATCCATTGGTTGAAATGAAAGAAGCTTTGTTATCCGAAGGATATGGGGGATTAAATTTTAAGAACTTAAAATTGTTTAATCAAGCGTTACTAGCTAAACAAGATCCATGGGTTCTGAGATCGTCCACTTTCAAGGTATTGTCACAAGGGCCTGTAAATGGGGTTCGAGTGGTGGCTAATCTCCTTTCTCCTTCAAGTTCGTGGAATATCCAAAAATTATGGGAGGCAATGATGTCGGAAGATGTACAGGAAATCCTTCGAATTCCTGGTGAGTACTCGGTGAAGAGCGACTATAAATGTGCTATTCTTCATAGAATTTTGAGTTGGAGGTACGGGTTGATCGTAGGGTCAACGTGGTGGAATCGTCTTTGGAAGCTTCCTATTCCTACTAAAGTTGCTTTGTTTGTTTGGAAGTCGTGTCATGGGAGTACTACAACATACGGGCGTAAGGAGGAATCCGTGAGTCATGCTCTGTTTGGGTGTAGTCGTGCTAAACGCATCTGGTCGTCTATAATTGGATCGAGATGGACAAATGCTAAGCACTTTAGTTGTCTGGATATGTGGACTAAGATGGGCAGGGTGTTGTCTAATGATGATTTGGCTCGTGCTTGTATCACTATTCCTATCAATGCTAGGTATGATTTATTGGATAAAAATCTTAACATTATTTATTGTAGTGTTGCTTTTAAACTTGGTGATCACATAGTGGAAACTAGTGTAGTTGTTGGTTCGCCGTTAGGCAAGATCTTAGCCTCCTTGAGTGGGTTCAGAGATTTCTTTGGGCTTCATTTGGCTGAAAGAAGGAGTATTTCTCATTTGTTAATTTTGTTTGATTCATTGGTGTTGGTTCAGATTTTGGAAGGCATTTTAGCATGCCAGGTCGAAGTGGTAGATTATATTGTTGATATCAAACAAATTGCTTCTTCCTTTGCTTCTGTGTCCTTTCAACATGTGCATCGATCTTATAACTTGGCAGCTCATAGGTTGGCTCAAGTTGGTTTGTCAGGAAGATGGGAGTTGTGCTTGAATAATTTTCCAGTTCATCTGGTGGATTTGTATTCTATCAACTCTGCCATAACTGCCACACTGCCATGCGCCACAACCACCACTCTGCCATGCTCTCTTGCTCTCGCTCAAGTTGGTCGCATCGAAGAAAAAAAGAAGCTAGAGAAGACTTTGGAGAAGAAGAAGATGCATGAGAAGAAGAAGAAAGAAAAAGAAAAGAAAGAAAGAAAGGGACAGAAAGGGAGTCACGATTTGCAGGAGAAGAGAAAAAAGAAAAAAAAAAGAAAGAGAGAGAAGAAAACCCGATCAACGTAG

Protein sequence

MCKVIQGWKRKFFSIRANKVLIKSVMQAIPTYATSCFRLSKGSEEDPLVEMKEALLSEGYGGLNFKNLKLFNQALLAKQDPWVLRSSTFKVLSQGPVNGVRVVANLLSPSSSWNIQKLWEAMMSEDVQEILRIPGEYSVKSDYKCAILHRILSWRYGLIVGSTWWNRLWKLPIPTKVALFVWKSCHGSTTTYGRKEESVSHALFGCSRAKRIWSSIIGSRWTNAKHFSCLDMWTKMGRVLSNDDLARACITIPINARYDLLDKNLNIIYCSVAFKLGDHIVETSVVVGSPLGKILASLSGFRDFFGLHLAERRSISHLLILFDSLVLVQILEGILACQVEVVDYIVDIKQIASSFASVSFQHVHRSYNLAAHRLAQVGLSGRWELCLNNFPVHLVDLYSINSAITATLPCATTTTLPCSLALAQVGRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTRST
Homology
[Close]
BLAST of ClCG10G007560 vs. TrEMBL
Match: G0SHL7_CHATD (Putative uncharacterized protein OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=CTHT_0070480 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.1e-06
Identity = 28/61 (45.90%), Postives = 47/61 (77.05%), Query Frame = 1 

Query: 423 AQVGRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 482
           A+ GR+ +KKK +K  +KKK  +KKKK+K+KK++K +K     ++K+K+KKK+K++KK R
Sbjct: 237 ARAGRVGKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKKKGR 296

Query: 483 S 484
           +
Sbjct: 297 T 297

[Close]
BLAST of ClCG10G007560 vs. TrEMBL
Match: W4XZM0_STRPU (Uncharacterized protein OS=Strongylocentrotus purpuratus PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.7e-06
Identity = 29/63 (46.03%), Postives = 48/63 (76.19%), Query Frame = 1 

Query: 420 LALAQVGRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREK 479
           LAL ++G  + KKK +K  +KKK  +KKKK+K+KK++K +K   + ++K+KKKKK+K++K
Sbjct: 165 LALERLGIKKMKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEKKKKKKKKKKKKKKK 224

Query: 480 KTR 483
           K +
Sbjct: 225 KKK 227

[Close]
BLAST of ClCG10G007560 vs. TrEMBL
Match: W4XZM0_STRPU (Uncharacterized protein OS=Strongylocentrotus purpuratus PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.8e-04
Identity = 25/54 (46.30%), Postives = 43/54 (79.63%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 483
           ++KKK +K  ++ KM EKKKK+K+KK++K +K +   ++K+KKKKK+K++KK +
Sbjct: 71  KKKKKKKKKKKENKMKEKKKKKKKKKKKKKKKENKMKKKKKKKKKKKKKKKKKK 124


HSP 2 Score: 52.8 bits (125), Expect = 1.4e-03
Identity = 26/58 (44.83%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKK----KMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 483
           ++KKK +K  E K    K  +KKKK+K+KK++K +K  + ++EK+KKKKK+K++KK +
Sbjct: 45  KKKKKKKKKKENKMMKKKKKKKKKKKKKKKKKKKKKKENKMKEKKKKKKKKKKKKKKK 102


HSP 3 Score: 52.4 bits (124), Expect = 1.8e-03
Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 483
           ++KKK +K  E K M +KKKK+K+KK++K +      ++K+KKKKK+K++KK +
Sbjct: 25  KKKKKKKKKKENKMMKKKKKKKKKKKKKKKENKMMKKKKKKKKKKKKKKKKKKK 78


HSP 4 Score: 49.3 bits (116), Expect = 1.5e-02
Identity = 23/52 (44.23%), Postives = 41/52 (78.85%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKK 481
           ++KKK +K  ++ KM EKKKK+K+KK+++ +     +++K+KKKKK+K++KK
Sbjct: 7   KKKKKKKKKKKENKMKEKKKKKKKKKKKENKM----MKKKKKKKKKKKKKKK 54


HSP 5 Score: 40.0 bits (92), Expect = 9.4e+00
Identity = 21/51 (41.18%), Postives = 35/51 (68.63%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREK 480
           ++KKK +K  ++ KM +KKKK+K+KK++K +K      +K  KKK  K++K
Sbjct: 92  KKKKKKKKKKKENKMKKKKKKKKKKKKKKKKK------KKMMKKKMMKKKK 136


HSP 6 Score: 36.6 bits (83), Expect = 1.0e+02
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKK 473
           EEKKK +K   KKK  +KKKK+K+KK  K +KG   ++E+R+++
Sbjct: 208 EEKKKKKK---KKKKKKKKKKKKKKKMMKKKKG---VKEERRRR 245


HSP 7 Score: 35.8 bits (81), Expect = 1.8e+02
Identity = 25/79 (31.65%), Postives = 37/79 (46.84%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKK-------------------------ERKGQKGSH 483
           ++KKK +K + KKKM +KKK E                             ER G K   
Sbjct: 117 KKKKKKKKKMMKKKMMKKKKGELHLNVDCFRQIPKLTTNIHNKTKYKILALERLGIKKMK 176

[Close]
BLAST of ClCG10G007560 vs. NCBI nr
Match: gi|848871323|ref|XP_012836236.1| (PREDICTED: uncharacterized protein LOC105956874 [Erythranthe guttata])

HSP 1 Score: 72.0 bits (175), Expect = 3.2e-09
Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1 

Query: 1   MCKVIQGWKRKFFSIRANKVLIKSVMQAIPTYATSCFRLSKGSEED-------------- 60
           +C+ +QGWK K+ S    ++LIK+V+QAIPTYA SCFRL +   E+              
Sbjct: 194 VCQRLQGWKEKWLSKGGKEILIKAVIQAIPTYAMSCFRLPRYFTEEIERLMAKFWWEDSQ 253

Query: 61  ----PLVEMKEALLSEGYGGLNFKNLKLFNQALLAKQDPWVLRSSTFKVLSQ 95
                    KE   S+ +GGL F++L  FN ALLAKQ  W L  S   +L +
Sbjct: 254 GKGVHWARWKELCKSKDFGGLGFRDLHAFNTALLAKQ-VWRLLVSPHSLLGR 304

[Close]
BLAST of ClCG10G007560 vs. NCBI nr
Match: gi|848871323|ref|XP_012836236.1| (PREDICTED: uncharacterized protein LOC105956874 [Erythranthe guttata])

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-03
Identity = 46/183 (25.14%), Postives = 75/183 (40.98%), Query Frame = 1 

Query: 79  QDPWVLRSSTFKVLS---QGPVNGVRVVANLLSPSSSWNIQKLWEAMMSEDVQEILRIP- 138
           +D W+ R  TFKV +     P++ ++V + +   +  W +  +      ED + IL IP 
Sbjct: 357 RDKWLPRERTFKVFTPRENWPID-MKVQSLIDGNTGLWKVNMIASMFYEEDRKSILSIPI 416

Query: 139 ----------------GEYSVKSDYKCAILHRILSWRYGL-------IVGSTWWNRLWKL 198
                           G +SV+S Y  A+   +   + G+       +V S  W  LW L
Sbjct: 417 GSAINEDRLIWHYNKNGLFSVRSAYHTAV--HLEQEKAGVNIASGSSLVSSRSWKWLWDL 476

Query: 199 PIPTKVALFVWKSCHGSTTT-----------------YGRKEESVSHALFGCSRAKRIWS 218
            +P K+ +F+W+ C+    T                  G  EE V H L  CS A+++  
Sbjct: 477 NLPNKIKIFLWRCCNNLLPTRQNLTNRKILENSLCEICGAAEEDVLHCLSLCSFARQMQR 536


HSP 2 Score: 40.0 bits (92), Expect = 1.3e+01
Identity = 26/91 (28.57%), Postives = 44/91 (48.35%), Query Frame = 1 

Query: 307 LHLAERRSISHLLILFDSLVLVQILEGILACQVEVVDYIVDIKQIASSFASVSFQHVHRS 366
           +  A+    S +++  DS  +V  + G    +    + I DIK++AS+F     +HV R 
Sbjct: 600 MEFAQNHRWSRVVLECDSSTIVAAIAGEFGSRTIYGNVIDDIKRLASTFEVFKIRHVKRE 659

Query: 367 YNLAAHRLAQVGLSGRWELCLNNFPVHLVDL 398
            N AAH +A+  LS       N  P  ++D+
Sbjct: 660 ANRAAHEIAR--LSSIDSFMSNVLPNFIIDI 688


HSP 3 Score: 61.6 bits (148), Expect = 4.3e-06
Identity = 29/65 (44.62%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 418 CSLALAQVGRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKR 477
           C +AL   G+ ++KKK +K  +KKK  +KKKK+K+KK++K +K     ++K+KKKKK+K+
Sbjct: 10  CDVALFICGKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 69

Query: 478 EKKTR 483
           +KK +
Sbjct: 70  KKKKK 74

[Close]
BLAST of ClCG10G007560 vs. NCBI nr
Match: gi|632917557|gb|KDB17034.1| (ENTH domain containing protein [Ustilaginoidea virens])

HSP 1 Score: 36.2 bits (82), Expect = 1.9e+02
Identity = 15/33 (45.45%), Postives = 26/33 (78.79%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKG 462
           ++KKK +K  +KKK  +KKKK+K+K+++ G +G
Sbjct: 177 KKKKKKKKKKKKKKKKKKKKKKKKKEQKPGDQG 209


HSP 2 Score: 31.6 bits (70), Expect = 4.8e+03
Identity = 17/48 (35.42%), Postives = 28/48 (58.33%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRK 477
           ++KKK +K  +KKK  +KKKK+++K   +G   S   ++  K   K K
Sbjct: 180 KKKKKKKKKKKKKKKKKKKKKKEQKPGDQGDTMSGSFEKSVKGATKIK 227


HSP 3 Score: 61.2 bits (147), Expect = 5.6e-06
Identity = 28/57 (49.12%), Postives = 43/57 (75.44%), Query Frame = 1 

Query: 426 GRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 483
           G  EEK+K EK  +KKK  +KKKK+K+KK +K +KG    +E++K+KKK+K++KK +
Sbjct: 47  GEEEEKRKKEKKKKKKKKKKKKKKKKKKKNKKKKKGEKKKKERKKEKKKKKKKKKKK 103

[Close]
BLAST of ClCG10G007560 vs. NCBI nr
Match: gi|918340282|gb|KOG00789.1| (hypothetical protein OCBIM_22033980mg, partial [Octopus bimaculoides])

HSP 1 Score: 47.8 bits (112), Expect = 6.4e-02
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKE-----KEKKERKGQKGSHDLQEKRKKKKKRKREKK 481
           ++KKK +K  +KKK  EKKKKE     K+KK++K +KG     EK+KKK+K+K EK+
Sbjct: 67  KKKKKKKKKNKKKKKGEKKKKERKKEKKKKKKKKKKKG-----EKKKKKEKKKTEKE 118


HSP 2 Score: 39.7 bits (91), Expect = 1.8e+01
Identity = 18/57 (31.58%), Postives = 38/57 (66.67%), Query Frame = 1 

Query: 426 GRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 483
           G  E + K E+  E  +  E++++E+E++E + + G  + + K++KKKK+K++KK +
Sbjct: 12  GEEEGRGKDEEEEEGGEYEEEEEEEEEEEEEEEEGGEEEEKRKKEKKKKKKKKKKKK 68


HSP 3 Score: 39.7 bits (91), Expect = 1.8e+01
Identity = 18/46 (39.13%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 429 EEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKK 475
           E KK+ +K  +KKK   +KKK+KEKK+ + + G  + + + ++KKK
Sbjct: 88  ERKKEKKKKKKKKKKKGEKKKKKEKKKTEKEVGEEEKENEEEEKKK 133


HSP 4 Score: 60.8 bits (146), Expect = 7.3e-06
Identity = 28/61 (45.90%), Postives = 47/61 (77.05%), Query Frame = 1 

Query: 423 AQVGRIEEKKKLEKTLEKKKMHEKKKKEKEKKERKGQKGSHDLQEKRKKKKKRKREKKTR 482
           A+ GR+ +KKK +K  +KKK  +KKKK+K+KK++K +K     ++K+K+KKK+K++KK R
Sbjct: 237 ARAGRVGKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKKKGR 296

Query: 483 S 484
           +
Sbjct: 297 T 297

The following BLAST results are available for this feature:
BLAST of ClCG10G007560 vs. TrEMBL
Match NameE-valueIdentityDescription
G0SHL7_CHATD5.1e-0645.90Putative uncharacterized protein OS=Chaetomium thermophilum (strain DSM 1495 / C... [more]
W4XZM0_STRPU6.7e-0646.03Uncharacterized protein OS=Strongylocentrotus purpuratus PE=4 SV=1[more]
W4XZM0_STRPU2.8e-0446.30Uncharacterized protein OS=Strongylocentrotus purpuratus PE=4 SV=1[more]
BLAST of ClCG10G007560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|848871323|ref|XP_012836236.1|3.2e-0939.29PREDICTED: uncharacterized protein LOC105956874 [Erythranthe guttata][more]
gi|848871323|ref|XP_012836236.1|3.4e-0325.14PREDICTED: uncharacterized protein LOC105956874 [Erythranthe guttata][more]
gi|632917557|gb|KDB17034.1|1.9e+0245.45ENTH domain containing protein [Ustilaginoidea virens][more]
gi|918340282|gb|KOG00789.1|6.4e-0249.12hypothetical protein OCBIM_22033980mg, partial [Octopus bimaculoides][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G007560.1ClCG10G007560.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 305..381
score: 7.7
NoneNo IPR availableunknownCoilCoilcoord: 431..455
scor
NoneNo IPR availablePFAMPF13456RVT_3coord: 305..376
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG10G007560Cucumber (Gy14) v1cgywcgB444
ClCG10G007560Cucurbita maxima (Rimu)cmawcgB283
ClCG10G007560Cucurbita maxima (Rimu)cmawcgB614
ClCG10G007560Cucurbita moschata (Rifu)cmowcgB278
ClCG10G007560Cucurbita moschata (Rifu)cmowcgB615
ClCG10G007560Wild cucumber (PI 183967)cpiwcgB190
ClCG10G007560Cucumber (Chinese Long) v2cuwcgB189
ClCG10G007560Melon (DHL92) v3.5.1mewcgB414
ClCG10G007560Melon (DHL92) v3.5.1mewcgB416
ClCG10G007560Watermelon (97103) v1wcgwmB054
ClCG10G007560Cucurbita pepo (Zucchini)cpewcgB195
ClCG10G007560Cucurbita pepo (Zucchini)cpewcgB349
ClCG10G007560Bottle gourd (USVL1VR-Ls)lsiwcgB318
ClCG10G007560Cucumber (Gy14) v2cgybwcgB174
ClCG10G007560Melon (DHL92) v3.6.1medwcgB402
ClCG10G007560Silver-seed gourdcarwcgB0009
ClCG10G007560Silver-seed gourdcarwcgB0991
ClCG10G007560Cucumber (Chinese Long) v3cucwcgB194
ClCG10G007560Watermelon (97103) v2wcgwmbB038
ClCG10G007560Wax gourdwcgwgoB098