ClCG10G006690 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACCATATATAATCTCCTTCCTCTTCTTCGTCCCAACTCGGAGTAACGTCGTCCGGCAACTCAGTTCCTCCCGAGTCGCGATCTCATTCCAACTTGGCCATGGCTTCGGTCCACGCCACAGCTTCTCAGAGGTTCACTGCCTTCACCACAGCAAAACGAGCTCCCGCGCCCTCTCATCCGCGCGCCACCCTCAATTTCCACGCGCCGAAGCTTCCGGAGCGTTCGATTTTCTCGAGAAACGGGCGGAAGTCAAATTGGGCGTTGAACTCGGTGGTGGAAGAGTTCGATGTCATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGCGTGACGGTGGGTCGGGTGGAGAGGGATGGAGTGGAGGGAGAGCTGGGGAGTGCGGTAGGTGGTTTCGGCGAGCTCTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGCTTCTGTTGGCGATGGCGGTGGAACGGAGAACGGGGAAATGGAGAGGGTTATGATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCCTATGCTCTCACGAAGTTGCTTACCATCGATCAAGATTATTGGCATGTGAGTCATTCTTTTCAATTGCTTCAATTCGATAGCTATCTGTGTTTACTTGGGAATGAAATTGTATAGTTGGGAACTGCTTTGAATAAGCTTGTGAAGTGTGAAGCTAACTTGAATATACTGTCACTGTCAGATTGATAAATCAAAGGAATAAACTATGCTACTATATGCGGTTCAATCTTAGGAAGGAGCAGAAGAAACAACTACATAGGACTGGAGTTCCTTTTTTTTTTTTTTTTTTTTGCTTGCTTTTGGAAAGTTATGTAATGATTGGTGATATGATATCTATATGAAGTTTGCTCTACTAGAAGACAGGAATAAATTGGTTAAACTCAAAATTAGGGTGAAACTTTACTGCTTCAGCATTTTGGAAAAGCTGTAAAAAGTTTCATGCTTTGGGAGAAAGTCAAAAGCACCTTAAATTTTGTAAAAAAGAAACTGTAGTGTAACTTCAAAATCAATTCTTGGTTCAGTCACCAAGAAGACGTAGTATCAAGTATGANTTTTTTTTTTTTTTTTTTTTTTTTGCTTGCATTTGGAAAGTTATGTAATGATTGGTGATATGATATCTATATGAAGTTTGCTCTACTAGAAGACAGGAATAAATTGGTTAAACTCAAAATTAGGGTGAAACTTTACTGCTTCAGCATTTTGGAAAAGCTGTAAAAAGTTTCATGCTTTGGGAGAAAGTCAAAAGCACCTTAAATTTTGTAAAAAAGAAACTGTAGTGTAACTTCAAAATCAATTCTTGGTTCAGTCACCAAGAAGACGTAGTATCAAGTATGAAAGTAATTTCTTATTGAACATTTTTTACATTAGTCTTTTGCTAAAAGCACTTATTTTGGAAGCACACCCTACACAATCTAATTGTTATTATTTGGGGAGTTTTTAGTCACTAAAGAAGTTCAGCACTTGGACAACAGTCTAAAGAAGTGTGCTGAGGAGTAATCTGATAGTCGCTCACACTTCAAGCTTGTCATTCAAACCTATGCAGCATTCTAATTTTTCTTTTCCTTTTAACCTGCAGGGATGGACACTTTATGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACGCACCCGGTCCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCACAGGTAAACTCATTCATACCATCAACTTTTTACATCATCAAATATCTTCTCCTTGCCCATGTAAATGATTTTTCTCATTTTTAAATTTGTTCTTGTAGTGTTTTGAAGGAAAACCTCTATTTGAATTTGATCGCACACGCATGTTCAGATCAGGCCTCGTGGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGTATGCTTTCTGGATTTTATTCCTTGCGCTTTGTTGTCAAGATGTTTCTTTAGCTGAAGATGAACTTCAGTTTGTTAATCTCTGTCCTGTTACTTCACATTAAACAAGAAATCCTCTGTCTTGTGTTTCCAGGGTCTCTTTCCTTTCCAAGATTGGTGGGTAGTTCCTGCAAAAGTAGCATTCGACCAAACGGCATGGTCAGCAGTTTGGAACAGTATTTATTTTGTGGTATTAGGATTCCTGCGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAAGACGACATTTTGGCCTATGCTTACCGTAAGAGATTCTATTCTTTTCCTAAATCTTCATATTTCTACCTATGCTTACCGTAAGAGATTCTATTCTTTTCCTGAATCTTCATATTTCTATGAGTTGGTTGAATAAGACAAGACACATTCCATTCCTTCTGGTTGAATATGTAGCAAGTTTTACGTACACTAGTTTTTGACCACCCTTCCCTTCTGGTTGGCCCTTAATTCAATTGTGTACAAAAGGTTGGAAATTGATTTTGCATAATTATGTTGTCTGCATACAAAGAAACGGTCAATATCATGTCCATAGTTTGAATCTAAATTTAATTCACACCAAAATAACTTTGAAAATATAATTACCAGAAGTTTGAAGACAGTGCTTTTGTCTTTTAATCTCTTAACTTAATTTTGGATTTGTTTTGTTCAGGCGGGTTGGAAACTTTGGCCGTTTGCTCATCTTATCACATACGGTGTTATTCCTGTAGAACAAAGACTCCTGTGGGTTGATTGTGTGGAGCTTATCTGGGTGACCATACTCTCAACGTAAGCATATTATCGTAGTATCATAGAGTTAGTCTTGTTATGTTATATTATAATATATCTCTTTAAGAGGGAGCTGAATGCAATCAAGTCTTGTTGAGCAGTATGCTTTCCTATGATTGTGGTCACGCTGCCTATAGCTAGTTCTCTCCTAACATTTGCTAATTTATCGATTGCTAGTTATTCAAACGAGAAATCGGAGGCCAGAATATCTGAGGTAGCAACAGATTCTAGTTCAGATTCTCTTCGCACAGATTCAACTCAGGTATGTTGGTCTTAGAACCCTTAATCGATCATTTTATCAAATATCCCTTGCTGGACCAACCATGTCTGTTCTGCTTCTTTGGTTTTATCAGGGCTAAGCTTGCAGGAAAATCCATGTATAGATATGAAGATGGAACAGTTTGTTGCTCAATTCAACTCCAAGAGTCTCAAGAGTAAGATCCACTCCTAGAAATACTGTACACGTATATATGATTCCAGCTGCAAATCTTGATTGTTGTATGTTGTCAAGAAATCTCTAAACTTGATTGTAGATGTCATATTACTTGTAGTCTTTTTTCATTTTGATAGCTTTACAACATCAACTGTATAAAAATAATGAAATATATAGAATATTCCACTTCCATTGGCTCTTCAAGCTTTGTCCATGGTGCCAAAGATCAGAAGCTGCAGGAAAAACTTCTTGAAGCCTCTTTGATATTCCTTCACCGTCAATTCTTCCATGAAAAAACATCTGTGGGGTTAAGTGAGCTGAAGATAAGAACCGTCATGAAATTGGCTAAAACGTACAAGCTATGCTTTGGATGTTGTCAAGATTATATGTTAGATATCGTACAAGTTTTCTGACTAAGGTTGTAGAATCAGGGGGTTAATTGGTTTGACAGATTAGTTCGAGATGTACATGAAAACATCTTTATGTTATTGGTTTGCTTGTCTCACAACAAGCATAAAGGACTTAGGCTGCAATTATCCTCAAATAAAGGTCCTTTTGGGCAAAATTCATTGGAAAAGGGAAAGTAGAGAAGCTCCTTGTATTTTCTGGAATCTGTAGGATGTTGTTTTTGGGGATGGAACAGGAATAAATAGGGGTGTGGCAAATGGGGATTCTATTGAACACAAAGACCCCACATGTATTACTTGTTTTGTTTTCTTAGGGATATTCCTCTCGTGTCAATCGGTTATTATTG CAACCATATATAATCTCCTTCCTCTTCTTCGTCCCAACTCGGAGTAACGTCGTCCGGCAACTCAGTTCCTCCCGAGTCGCGATCTCATTCCAACTTGGCCATGGCTTCGGTCCACGCCACAGCTTCTCAGAGGTTCACTGCCTTCACCACAGCAAAACGAGCTCCCGCGCCCTCTCATCCGCGCGCCACCCTCAATTTCCACGCGCCGAAGCTTCCGGAGCGTTCGATTTTCTCGAGAAACGGGCGGAAGTCAAATTGGGCGTTGAACTCGGTGGTGGAAGAGTTCGATGTCATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGCGTGACGGTGGGTCGGGTGGAGAGGGATGGAGTGGAGGGAGAGCTGGGGAGTGCGGTAGGTGGTTTCGGCGAGCTCTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGCTTCTGTTGGCGATGGCGGTGGAACGGAGAACGGGGAAATGGAGAGGGTTATGATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCCTATGCTCTCACGAAGTTGCTTACCATCGATCAAGATTATTGGCATGGATGGACACTTTATGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACGCACCCGGTCCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCACAGTGTTTTGAAGGAAAACCTCTATTTGAATTTGATCGCACACGCATGTTCAGATCAGGCCTCGTGGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGGTCTCTTTCCTTTCCAAGATTGGTGGGTAGTTCCTGCAAAAGTAGCATTCGACCAAACGGCATGGTCAGCAGTTTGGAACAGTATTTATTTTGTGGTATTAGGATTCCTGCGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAAGACGACATTTTGGCCTATGCTTACCGCGGGTTGGAAACTTTGGCCGTTTGCTCATCTTATCACATACGGTGTTATTCCTGTAGAACAAAGACTCCTGTGGGTTGATTGTGTGGAGCTTATCTGGGTGACCATACTCTCAACTTATTCAAACGAGAAATCGGAGGCCAGAATATCTGAGGTAGCAACAGATTCTAGTTCAGATTCTCTTCGCACAGATTCAACTCAGGTATGGCTAAGCTTGCAGGAAAATCCATGTATAGATATGAAGATGGAACAGTTTGTTGCTCAATTCAACTCCAAGAGTCTCAAGAGTAAGATCCACTCCTAGAAATACTGTACACGTATATATGATTCCAGCTGCAAATCTTGATTGTTGTATGTTGTCAAGAAATCTCTAAACTTGATTGTAGATGTCATATTACTTGTAGTCTTTTTTCATTTTGATAGCTTTACAACATCAACTGTATAAAAATAATGAAATATATAGAATATTCCACTTCCATTGGCTCTTCAAGCTTTGTCCATGGTGCCAAAGATCAGAAGCTGCAGGAAAAACTTCTTGAAGCCTCTTTGATATTCCTTCACCGTCAATTCTTCCATGAAAAAACATCTGTGGGGTTAAGTGAGCTGAAGATAAGAACCGTCATGAAATTGGCTAAAACGTACAAGCTATGCTTTGGATGTTGTCAAGATTATATGTTAGATATCGTACAAGTTTTCTGACTAAGGTTGTAGAATCAGGGGGTTAATTGGTTTGACAGATTAGTTCGAGATGTACATGAAAACATCTTTATGTTATTGGTTTGCTTGTCTCACAACAAGCATAAAGGACTTAGGCTGCAATTATCCTCAAATAAAGGTCCTTTTGGGCAAAATTCATTGGAAAAGGGAAAGTAGAGAAGCTCCTTGTATTTTCTGGAATCTGTAGGATGTTGTTTTTGGGGATGGAACAGGAATAAATAGGGGTGTGGCAAATGGGGATTCTATTGAACACAAAGACCCCACATGTATTACTTGTTTTGTTTTCTTAGGGATATTCCTCTCGTGTCAATCGGTTATTATTG ATGGCTTCGGTCCACGCCACAGCTTCTCAGAGGTTCACTGCCTTCACCACAGCAAAACGAGCTCCCGCGCCCTCTCATCCGCGCGCCACCCTCAATTTCCACGCGCCGAAGCTTCCGGAGCGTTCGATTTTCTCGAGAAACGGGCGGAAGTCAAATTGGGCGTTGAACTCGGTGGTGGAAGAGTTCGATGTCATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGCGTGACGGTGGGTCGGGTGGAGAGGGATGGAGTGGAGGGAGAGCTGGGGAGTGCGGTAGGTGGTTTCGGCGAGCTCTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGCTTCTGTTGGCGATGGCGGTGGAACGGAGAACGGGGAAATGGAGAGGGTTATGATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCCTATGCTCTCACGAAGTTGCTTACCATCGATCAAGATTATTGGCATGGATGGACACTTTATGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACGCACCCGGTCCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCACAGTGTTTTGAAGGAAAACCTCTATTTGAATTTGATCGCACACGCATGTTCAGATCAGGCCTCGTGGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGGTCTCTTTCCTTTCCAAGATTGGTGGGTAGTTCCTGCAAAAGTAGCATTCGACCAAACGGCATGGTCAGCAGTTTGGAACAGTATTTATTTTGTGGTATTAGGATTCCTGCGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAAGACGACATTTTGGCCTATGCTTACCGCGGGTTGGAAACTTTGGCCGTTTGCTCATCTTATCACATACGGTGTTATTCCTGTAGAACAAAGACTCCTGTGGGTTGATTGTGTGGAGCTTATCTGGGTGACCATACTCTCAACTTATTCAAACGAGAAATCGGAGGCCAGAATATCTGAGGTAGCAACAGATTCTAGTTCAGATTCTCTTCGCACAGATTCAACTCAGGTATGGCTAAGCTTGCAGGAAAATCCATGTATAGATATGAAGATGGAACAGTTTGTTGCTCAATTCAACTCCAAGAGTCTCAAGAGTAAGATCCACTCCTAG MASVHATASQRFTAFTTAKRAPAPSHPRATLNFHAPKLPERSIFSRNGRKSNWALNSVVEEFDVIPVQSADFTDQQEGVTVGRVERDGVEGELGSAVGGFGELSLGGAGEIQGFSSSASVGDGGGTENGEMERVMIDRIINATIVLAAGSYALTKLLTIDQDYWHGWTLYEILRYAPQHNWSAYEEALKTHPVLAKMVISGVVYSLGDWIAQCFEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELKTTFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEVATDSSSDSLRTDSTQVWLSLQENPCIDMKMEQFVAQFNSKSLKSKIHS
BLAST of ClCG10G006690 vs. Swiss-Prot
Match: PXMP2_BOVIN (Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3) HSP 1 Score: 90.9 bits (224), Expect = 3.5e-17 Identity = 50/176 (28.41%), Postives = 85/176 (48.30%), Query Frame = 1
BLAST of ClCG10G006690 vs. Swiss-Prot
Match: SYM1_ASHGO (Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.6e-16 Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 1
BLAST of ClCG10G006690 vs. Swiss-Prot
Match: SYM1_YARLI (Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SYM1 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.6e-15 Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 1
BLAST of ClCG10G006690 vs. Swiss-Prot
Match: PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3) HSP 1 Score: 82.0 bits (201), Expect = 1.6e-14 Identity = 45/175 (25.71%), Postives = 84/175 (48.00%), Query Frame = 1
BLAST of ClCG10G006690 vs. Swiss-Prot
Match: PXMP2_MOUSE (Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 2.1e-14 Identity = 46/174 (26.44%), Postives = 85/174 (48.85%), Query Frame = 1
BLAST of ClCG10G006690 vs. TrEMBL
Match: A0A0A0L5A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G100790 PE=4 SV=1) HSP 1 Score: 721.1 bits (1860), Expect = 7.7e-205 Identity = 350/375 (93.33%), Postives = 356/375 (94.93%), Query Frame = 1
BLAST of ClCG10G006690 vs. TrEMBL
Match: M5WH84_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007209mg PE=4 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 1.3e-151 Identity = 277/380 (72.89%), Postives = 303/380 (79.74%), Query Frame = 1
BLAST of ClCG10G006690 vs. TrEMBL
Match: W9QQ45_9ROSA (Peroxisomal membrane protein 2 OS=Morus notabilis GN=L484_007929 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 9.2e-150 Identity = 270/368 (73.37%), Postives = 297/368 (80.71%), Query Frame = 1
BLAST of ClCG10G006690 vs. TrEMBL
Match: A0A061F658_THECC (Peroxisomal membrane 22 kDa family protein isoform 1 OS=Theobroma cacao GN=TCM_031356 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 9.9e-144 Identity = 269/379 (70.98%), Postives = 297/379 (78.36%), Query Frame = 1
BLAST of ClCG10G006690 vs. TrEMBL
Match: B9HZY8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12440g PE=4 SV=2) HSP 1 Score: 515.4 bits (1326), Expect = 6.4e-143 Identity = 262/372 (70.43%), Postives = 297/372 (79.84%), Query Frame = 1
BLAST of ClCG10G006690 vs. TAIR10
Match: AT1G52870.2 (AT1G52870.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 478.4 bits (1230), Expect = 4.4e-135 Identity = 244/351 (69.52%), Postives = 271/351 (77.21%), Query Frame = 1
BLAST of ClCG10G006690 vs. TAIR10
Match: AT4G03410.2 (AT4G03410.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 408.3 bits (1048), Expect = 5.6e-114 Identity = 186/234 (79.49%), Postives = 205/234 (87.61%), Query Frame = 1
BLAST of ClCG10G006690 vs. TAIR10
Match: AT2G14860.1 (AT2G14860.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 80.1 bits (196), Expect = 3.5e-15 Identity = 50/175 (28.57%), Postives = 73/175 (41.71%), Query Frame = 1
BLAST of ClCG10G006690 vs. TAIR10
Match: AT4G14305.1 (AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 63.2 bits (152), Expect = 4.4e-10 Identity = 42/168 (25.00%), Postives = 69/168 (41.07%), Query Frame = 1
BLAST of ClCG10G006690 vs. NCBI nr
Match: gi|659102713|ref|XP_008452276.1| (PREDICTED: uncharacterized protein LOC103493348 isoform X1 [Cucumis melo]) HSP 1 Score: 738.4 bits (1905), Expect = 6.7e-210 Identity = 357/379 (94.20%), Postives = 366/379 (96.57%), Query Frame = 1
BLAST of ClCG10G006690 vs. NCBI nr
Match: gi|659102715|ref|XP_008452277.1| (PREDICTED: uncharacterized protein LOC103493348 isoform X2 [Cucumis melo]) HSP 1 Score: 735.7 bits (1898), Expect = 4.3e-209 Identity = 355/375 (94.67%), Postives = 363/375 (96.80%), Query Frame = 1
BLAST of ClCG10G006690 vs. NCBI nr
Match: gi|449463132|ref|XP_004149288.1| (PREDICTED: uncharacterized protein LOC101205134 [Cucumis sativus]) HSP 1 Score: 721.1 bits (1860), Expect = 1.1e-204 Identity = 350/375 (93.33%), Postives = 356/375 (94.93%), Query Frame = 1
BLAST of ClCG10G006690 vs. NCBI nr
Match: gi|700201086|gb|KGN56219.1| (hypothetical protein Csa_3G100790 [Cucumis sativus]) HSP 1 Score: 721.1 bits (1860), Expect = 1.1e-204 Identity = 350/375 (93.33%), Postives = 356/375 (94.93%), Query Frame = 1
BLAST of ClCG10G006690 vs. NCBI nr
Match: gi|595862645|ref|XP_007211442.1| (hypothetical protein PRUPE_ppa007209mg [Prunus persica]) HSP 1 Score: 544.3 bits (1401), Expect = 1.8e-151 Identity = 277/380 (72.89%), Postives = 303/380 (79.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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