ClCG10G006270 (gene) Watermelon (Charleston Gray)

Overview
NameClCG10G006270
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEnvelope-like protein
LocationCG_Chr10 : 8687080 .. 8688042 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATTTCATTGCTTGCCTAGAAAACCCTAAAGATATTGTTGGTTCATCTATCTTTCAAGAAGAAATTAGGGTTCCTGAAGGTGAAATGGGTGGTAATGATAATCCAGTCCTTGAGTCTGATAATGTTGAGTCTGTTTTACCTAAATCCTCTATGATTGCGGAAGGAAAAAGTGGCCTTGAATTTGCTGAAATAGAAATTGAAAATGTCCCTGTGCTTGATGAAATTACTTCTAATGACCTAGTTGGTCAAGTTGTTGCTCTGTATCTGCTTTACCTCTAACTGGTACTTTCGAAAAGCTTGCTGAGATTGTTGAAGGAAATGTCTCTTGAATTTTTCCAACCTGTTGAGGAGGGTGTTAATACTTCTCTTGAATTTATTGTCATGTGTACACAAAGGAGTTGTGACTGATGACGTGGCTGGGGACAAAATGACTACTGTGAACGATGAGAACTTGAATAGTATAGTCTTGCCTGATATGGATCTTGAAACTAATGAACATATTTCTAAAGAAACCCCTCCCTCTATTAATGTTGTTGAAGAAGATAGTACGACTTTTGCTAAGCCTCAATTCAAGTGACATGGGAAGGCTGAGGTAGATGTTGATGCTTCTTCCTGAGACATCCAATTTTGAAAAGTCTCCCTTTGATGAGGATTTCAACAGGGGGTTTCCAAAGTAGCTCAGATAATGAAGACACTGAAAATGTGCGGGTCACTTGTGCTACAACAAAAGGGAAAGGAAAGCAGACTACTAATGGTAATGTTTCCACTATACCATTGGATGAGGTGTCCTTTCATATAGAAAAGGGTGCTGGTGTGTGGAAGTATGTGGTGAAGAGAAATATTGTAGATGAAAAAGAGCTATCGGAAAGTACCAAGGAATGTCTTGATCTTAGGGATTTGCTTCCTGAAGCCAGGTTAGAGAAGATTGTGTTGCATTTGGGGTCTTTTTATCCCTAA

mRNA sequence

ATGCATGATTTCATTGCTTGCCTAGAAAACCCTAAAGATATTGTTGGTTCATCTATCTTTCAAGAAGAAATTAGGGTTCCTGAAGGTGAAATGGGTGGTAATGATAATCCAGTCCTTGAGTCTGATAATGTTGAGTCTGTTTTACCTAAATCCTCTATGATTGCGGAAGGAAAAAGTGGCCTTGAATTTGCTGAAATAGAAATTGAAAATGTCCCTGTGCTTGATGAAATTACTTCTAATGACCTAGTTGGTCAAGTTGTTGCTCTGAGGGTGTTAATACTTCTCTTGAATTTATTGTCATGTGTACACAAAGGAGTTGTGACTGATGACGTGGCTGGGGACAAAATGACTACTGTGAACGATGAGAACTTGAATAGTATAGTCTTGCCTGATATGGATCTTGAAACTAATGAACATATTTCTAAAGAAACCCCTCCCTCTATTAATGTTGTTGAAGAAGATAGGGGTTTCCAAAGTAGCTCAGATAATGAAGACACTGAAAATGTGCGGGTCACTTGTGCTACAACAAAAGGGAAAGGAAAGCAGACTACTAATGGTAATGTTTCCACTATACCATTGGATGAGGTGTCCTTTCATATAGAAAAGGGTGCTGGTGTGTGGAAGTATGTGGTGAAGAGAAATATTGTAGATGAAAAAGAGCTATCGGAAAGTACCAAGGAATGTCTTGATCTTAGGGATTTGCTTCCTGAAGCCAGGTTAGAGAAGATTGTGTTGCATTTGGGGTCTTTTTATCCCTAA

Coding sequence (CDS)

ATGCATGATTTCATTGCTTGCCTAGAAAACCCTAAAGATATTGTTGGTTCATCTATCTTTCAAGAAGAAATTAGGGTTCCTGAAGGTGAAATGGGTGGTAATGATAATCCAGTCCTTGAGTCTGATAATGTTGAGTCTGTTTTACCTAAATCCTCTATGATTGCGGAAGGAAAAAGTGGCCTTGAATTTGCTGAAATAGAAATTGAAAATGTCCCTGTGCTTGATGAAATTACTTCTAATGACCTAGTTGGTCAAGTTGTTGCTCTGAGGGTGTTAATACTTCTCTTGAATTTATTGTCATGTGTACACAAAGGAGTTGTGACTGATGACGTGGCTGGGGACAAAATGACTACTGTGAACGATGAGAACTTGAATAGTATAGTCTTGCCTGATATGGATCTTGAAACTAATGAACATATTTCTAAAGAAACCCCTCCCTCTATTAATGTTGTTGAAGAAGATAGGGGTTTCCAAAGTAGCTCAGATAATGAAGACACTGAAAATGTGCGGGTCACTTGTGCTACAACAAAAGGGAAAGGAAAGCAGACTACTAATGGTAATGTTTCCACTATACCATTGGATGAGGTGTCCTTTCATATAGAAAAGGGTGCTGGTGTGTGGAAGTATGTGGTGAAGAGAAATATTGTAGATGAAAAAGAGCTATCGGAAAGTACCAAGGAATGTCTTGATCTTAGGGATTTGCTTCCTGAAGCCAGGTTAGAGAAGATTGTGTTGCATTTGGGGTCTTTTTATCCCTAA

Protein sequence

MHDFIACLENPKDIVGSSIFQEEIRVPEGEMGGNDNPVLESDNVESVLPKSSMIAEGKSGLEFAEIEIENVPVLDEITSNDLVGQVVALRVLILLLNLLSCVHKGVVTDDVAGDKMTTVNDENLNSIVLPDMDLETNEHISKETPPSINVVEEDRGFQSSSDNEDTENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDEKELSESTKECLDLRDLLPEARLEKIVLHLGSFYP
Homology
[Close]
BLAST of ClCG10G006270 vs. TrEMBL
Match: A0A072USV5_MEDTR (Envelope-like protein, putative OS=Medicago truncatula GN=MTR_3g009370 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1 

Query: 141 SKETPPSINVVEEDRGFQSSSDNE-----DTENVRVTCA--TTKGKGKQTTNGNVSTIPL 200
           SK +  + N   + R   SSS++E     D  N+  T    +T  KG QT    V+ +P+
Sbjct: 817 SKVSVMAANESSKKRKVNSSSESEYEVEKDALNINATDVKKSTVKKGTQT----VANVPI 876

Query: 201 DEVSFHIEKGAGVWKYVVKRNIVDEKELSESTKECLDLRDLLPEARLEKIVLHLGSFY 252
           D+VSFH+ + A  WK++    +  E+ELSE T +  ++ + + EARL K V +LG  Y
Sbjct: 877 DKVSFHLLEFALRWKFIYHMRVAVERELSEETVKIKEVMEQIKEARLMKTVCNLGDCY 930

[Close]
BLAST of ClCG10G006270 vs. TrEMBL
Match: Q84VI3_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-06
Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 1 

Query: 159 SSSDNEDTENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDE 218
           SS  ++D E    T    K  GK+   GNV   PLD +SFH       WKYV +R +  E
Sbjct: 296 SSDSDKDVELDVSTSKKAKTSGKKVP-GNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVE 355

Query: 219 KELSESTKECLDLRDLLPEARLEKIVLHLGSFY 252
           +EL     +C ++ DL+  A L K V  LG  Y
Sbjct: 356 RELGRDALDCKEIMDLIKAAGLLKTVSKLGDCY 387

[Close]
BLAST of ClCG10G006270 vs. TrEMBL
Match: Q84VH7_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-06
Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 1 

Query: 159 SSSDNEDTENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDE 218
           SS  ++D E    T    K  GK+   GNV   PLD +SFH       WKYV +R +  E
Sbjct: 296 SSDSDKDVELDVSTSKKAKTSGKKVP-GNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVE 355

Query: 219 KELSESTKECLDLRDLLPEARLEKIVLHLGSFY 252
           +EL     +C ++ DL+  A L K V  LG  Y
Sbjct: 356 RELGRDALDCKEIMDLIKAAGLLKTVSKLGDCY 387

[Close]
BLAST of ClCG10G006270 vs. TrEMBL
Match: Q84VH9_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.9e-06
Identity = 33/93 (35.48%), Postives = 46/93 (49.46%), Query Frame = 1 

Query: 159 SSSDNEDTENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDE 218
           SSSD++D   + V       K  +   GNV   PLD +SFH       WK+V +R +  E
Sbjct: 281 SSSDSDDDVELDVPDIKRAKKSGKKVPGNVPDAPLDNISFHSIGNVERWKFVYQRRLALE 340

Query: 219 KELSESTKECLDLRDLLPEARLEKIVLHLGSFY 252
           +EL     +C ++ DL+  A L K V  LG  Y
Sbjct: 341 RELGRDALDCKEIMDLIKAAGLLKTVTKLGDCY 373

[Close]
BLAST of ClCG10G006270 vs. TrEMBL
Match: O64406_SOYBN (Envelope-like (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.9e-06
Identity = 33/93 (35.48%), Postives = 46/93 (49.46%), Query Frame = 1 

Query: 159 SSSDNEDTENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDE 218
           SSSD++D   + V       K  +   GNV   PLD +SFH       WK+V +R +  E
Sbjct: 273 SSSDSDDDVELDVPDIKRAKKSGKKVPGNVPDAPLDNISFHSIGNVERWKFVYQRRLALE 332

Query: 219 KELSESTKECLDLRDLLPEARLEKIVLHLGSFY 252
           +EL     +C ++ DL+  A L K V  LG  Y
Sbjct: 333 RELGRDALDCKEIMDLIKAAGLLKTVTKLGDCY 365

[Close]
BLAST of ClCG10G006270 vs. NCBI nr
Match: gi|659128057|ref|XP_008464024.1| (PREDICTED: uncharacterized protein LOC103502008 [Cucumis melo])

HSP 1 Score: 70.1 bits (170), Expect = 6.3e-09
Identity = 49/146 (33.56%), Postives = 67/146 (45.89%), Query Frame = 1 

Query: 109 DDVAGDKMTTVNDENLNSI--VLPDMDLETNEHISKETPPSINVVEEDRGFQSSSDNEDT 168
           D V   K T   +E + S   ++   D  T E  S + P   ++         SS     
Sbjct: 99  DYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSISMSPLVHVGSSSRPHR 158

Query: 169 ENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDEKELSESTK 228
           + VR     +   G +    N+  + +D VSFH E+GA  WKYVVKR IVDE  LS+   
Sbjct: 159 QLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYVVKRCIVDEANLSDQFN 218

Query: 229 ECLDLRDLLPEARLEKIVLHLGSFYP 253
            C  +RDL+  A L   V  +G FYP
Sbjct: 219 FCTAIRDLICNASLLHTVSEVGPFYP 244

[Close]
BLAST of ClCG10G006270 vs. NCBI nr
Match: gi|659114868|ref|XP_008457264.1| (PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 175 TTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDEKELSESTKECLDLRDL 234
           TTK   K+ +  NV ++P+D +SFH E+    WK+V++R IVDE  +S+  + C+ + DL
Sbjct: 178 TTKTDRKKISV-NVPSVPIDGISFHHEESVQCWKFVMQRRIVDEVNISDKHQSCMSIMDL 237

Query: 235 LPEARLEKIVLHLGSFYP 253
           + +A LEK + ++G FYP
Sbjct: 238 IHKAGLEKTISNVGPFYP 254

[Close]
BLAST of ClCG10G006270 vs. NCBI nr
Match: gi|659130162|ref|XP_008465030.1| (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-08
Identity = 31/78 (39.74%), Postives = 50/78 (64.10%), Query Frame = 1 

Query: 175 TTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDEKELSESTKECLDLRDL 234
           TTK   K+    NV ++P+D +SFH E+    WK+V+++ IVDE  +S+  + C+ + DL
Sbjct: 224 TTKTDRKKIP-ANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISDKHQSCMSIMDL 283

Query: 235 LPEARLEKIVLHLGSFYP 253
           + +A LEK +  +G FYP
Sbjct: 284 IHKAGLEKTISDVGPFYP 300

[Close]
BLAST of ClCG10G006270 vs. NCBI nr
Match: gi|659098514|ref|XP_008450174.1| (PREDICTED: uncharacterized protein LOC103491847 [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 4.1e-08
Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 1 

Query: 105 GVVTDDVAGDKMTTVNDENLNSIVLPDMDLETNEHISKETPPSINVVEEDRGFQSSSDNE 164
           G  TD+V G+ +  +  +N  + V   ++L  N  I  +  P++NV   +    S+    
Sbjct: 117 GQSTDNV-GENIAEIVHKNPGANVDDHVELTYNSTID-DGVPNVNVPPTESEQASTKSRA 176

Query: 165 DTENVRVTCAT-TKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDEKEL-- 224
             +  + +C   T    ++    N+  +P++ +SFH+E+    WKYVV+R+I DE  +  
Sbjct: 177 KGKKSQESCLNITTETERKKIRLNIPPVPINGISFHLEESVQRWKYVVQRHIADEVNVFN 236

Query: 225 -----SESTKECLDLRDLLPEARLEKIVLHLGSFYP 253
                S+    CL + DL+ +ARL K++ ++ SFYP
Sbjct: 237 KHHLCSDKHHFCLSVMDLIVKARLSKVIFNVESFYP 270

[Close]
BLAST of ClCG10G006270 vs. NCBI nr
Match: gi|659120594|ref|XP_008460264.1| (PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 5.3e-08
Identity = 40/153 (26.14%), Postives = 72/153 (47.06%), Query Frame = 1 

Query: 103 HKGV---VTDDVAGDKMTTVNDENLNSIVLPDMDLETNEHISKETPPSINVVEEDRGFQS 162
           HK V   V  +++G  +   ND  +   V P       E +      ++ V        +
Sbjct: 171 HKSVPDAVLGNISGAPVRHPNDREVEDEVEPQHPDIGTEEVPLNDDNNLVVPPASADIPA 230

Query: 163 SSDNEDTENVRVTCATTKGKGKQTTNGNVSTIPLDEVSFHIEKGAGVWKYVVKRNIVDEK 222
           +S+  + +  +     T   G +    N+ +IP+D +SFH E+    WK+V++R I DE 
Sbjct: 231 ASNPAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEV 290

Query: 223 ELSESTKECLDLRDLLPEARLEKIVLHLGSFYP 253
            +S+  + C+ + DL+  A L K + ++G FYP
Sbjct: 291 NVSDKHQSCMSIMDLIERAGLTKTISNVGPFYP 323

The following BLAST results are available for this feature:
BLAST of ClCG10G006270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A072USV5_MEDTR2.0e-0634.75Envelope-like protein, putative OS=Medicago truncatula GN=MTR_3g009370 PE=4 SV=1[more]
Q84VI3_SOYBN4.5e-0637.63Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Q84VH7_SOYBN4.5e-0637.63Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Q84VH9_SOYBN5.9e-0635.48Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
O64406_SOYBN5.9e-0635.48Envelope-like (Fragment) OS=Glycine max PE=4 SV=1[more]
BLAST of ClCG10G006270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128057|ref|XP_008464024.1|6.3e-0933.56PREDICTED: uncharacterized protein LOC103502008 [Cucumis melo][more]
gi|659114868|ref|XP_008457264.1|1.1e-0841.03PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo][more]
gi|659130162|ref|XP_008465030.1|3.1e-0839.74PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo][more]
gi|659098514|ref|XP_008450174.1|4.1e-0828.21PREDICTED: uncharacterized protein LOC103491847 [Cucumis melo][more]
gi|659120594|ref|XP_008460264.1|5.3e-0826.14PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G006270.1ClCG10G006270.1mRNA