ClCG10G006030 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGTTTAAGGGCAAAGAAGGAAGTTAAAAATTGTCCCCTCATTGCTCCTTTTAGTATAGTGTTGGAGAGTTGTGTTGTTGGCTCTCATATTGTGTTTAAGGTGGTTGCTTGAGTTTCGCTGATTGTCTCTTATTGTATCTTAACATCTGCTTATATCGTTGGATTTTTTTGCGAATATTTTATTTCTATATCAGGCGATTTTGTGTAGATTTATTCGATCCGATATTCTTTATCGGATCCACTGATTGCCTTTTCGGTCATGCCTTTGATTATTTCCTTACTAAGCTTATCAGTATAAAAGGTGATGATCATTATTTTCTAGAGTTCCCAACTTTTTGTATTGTGTGGAGATTGTTCTTGAGGGTGGCCAAATTCTTCACCGTGAAAAGTGTTTTGTGTTTTATCTTTTTGCTGTTGTGAACCTTTGAGAGAGCGAATTCAAAAGAACATGGCTGTCTTGAGGGAATCATAATGAGTTTTTCACATAAGCTATTCTTGGTCTCAAGGGGAGCCTAAGACCTCATACAGTGAGAAAGAAGTTCTCATTGCTTAGGAGAGCTAAGTGTACAAGTGAAGGGAGTTCATGGAGATTTGGGAGAGATAATCAATTGAAGAAGATTCGCACTAGCACTAACGGAAGCTGAATTGCATCTACACTAATATTGTCAAACATAGGGGGAGCATAAGCATATGAGAGGGAGTCTCACATCTAGGAGGAACCTAAGTGGTTATCTTATTAGCTTGGCTAGTGTCACTGTAGAAGTTGTTACTTTACAGATAAGTACCATGTTGTAATTGTTTAACATTTCAATATTAGTGGATTATCTTTCTCGGGCACACAACCCCCTAGACGTAGGTGTATATCACCAAACTAGATGATATACAGTCCAACACAATCGAACGAAGCACATTAACATAAAACATCATTTTTTTCGTGATTTAGTTGAAAGCAAACAAATTATTCTTGAACATATCAACACGAAAAATCAATTGGCTGACATTTTCACAAAACCCCTGAACACTGCTCAGTTTGAAGGGCTAAGAGCATCCCTAGGCTTATGTACTCTTGAAAAATAGCAATTAATTGAGTGGGCCTGGCAAAAGGAGAAATGACCCATTCGATTTTGAAGAACGCAGGAAGTGATCAGGCATTAACTGACTTAACTACGGTTAGTGAAGGATTAACTAGGTCAGTCTTTCTTTTAATTTCAAATTACTTTGCATTTCAATTTGGCTGGCAATTGATTTTTTGACAGGCTTTGTGTGCACATCGTGGGGTTTCAAAAGTTCCATATGCCTTGTCGTTTTCCCTTGATCGTTCTCTCCTTGCATGTGCCTGTGTGTCCTAAGTCTGTTCATTCTGAAACGATGGTTACTGAAAATATTTTATCGAAGAAATAGTCTAGATCAATCGAACGTGTGTTTGCTGAGTGTGCTAACAGAATTATCGCTGAAACTGTGGCCTCTATTGCTGGTATGTCTGAGGAATGTAATGTCAAAGATTCAATTTCTCCTAATGATCACATTGAGTATGTTGCTTCCACTCCTTCCACGACTCCTGAAAACACTGCTAAAAAAAGGAATGATCAAGTGTGTGTTGATCCTAAGCTTAGCGTTGAAGCCAATCCTCCTGCTGAAATCTCAAGAGTAGGGAATTCTGGTGATCTATCAAGTCCACCTGTAAGTCATGCTCGACTTGAGCAAAAAGTGTCTGAAAAAGAAACAAATGTCTCTCCGATGTCTCCTAGTGTTGAGTCTAAAAATTCTACAAAAATCACCTCTGATGAAGATGATGATTGGGGGGGTTTTCTCAGCAATTTTGAGGATGAAGCTCTTGTTAATATAAGAGTTACTAGAGGCTCGACTAAGGGAAAAGGAAAGGCAACTCCTGTAGGGAATGTTGCTTTAGTTCATTTAGATAGCGTGTCCTTCCATTCTGAAGAAGGGGCAAGTCTATGGAAATATGTGGTTAAACATAAGATAGTCGATGAAAAGGAGATCTCTGACAGTACTCAAGAATGCTTGGATCTTATAGATCTTCTCCTTGAAGCAGGGTTAGAAAAGACTCTATTATGCTTGGGTCTCTTTTATCCTTAG ATGGAAAGATCAATCGAACGTGTGTTTGCTGAGTGTGCTAACAGAATTATCGCTGAAACTGTGGCCTCTATTGCTGGTATGTCTGAGGAATGTAATGTCAAAGATTCAATTTCTCCTAATGATCACATTGAGTATGTTGCTTCCACTCCTTCCACGACTCCTGAAAACACTGCTAAAAAAAGGAATGATCAAGTGTGTGTTGATCCTAAGCTTAGCGTTGAAGCCAATCCTCCTGCTGAAATCTCAAGAGTAGGGAATTCTGGTGATCTATCAAGTCCACCTGTAAGTCATGCTCGACTTGAGCAAAAAGTGTCTGAAAAAGAAACAAATGTCTCTCCGATGTCTCCTAGTGTTGAGTCTAAAAATTCTACAAAAATCACCTCTGATGAAGATGATGATTGGGGGGGTTTTCTCAGCAATTTTGAGGATGAAGCTCTTGTTAATATAAGAGTTACTAGAGGCTCGACTAAGGGAAAAGGAAAGGCAACTCCTGTAGGGAATGTTGCTTTAGTTCATTTAGATAGCGTGTCCTTCCATTCTGAAGAAGGGGCAAGTCTATGGAAATATGTGGTTAAACATAAGATAGTCGATGAAAAGGAGATCTCTGACAGTACTCAAGAATGCTTGGATCTTATAGATCTTCTCCTTGAAGCAGGGTTAGAAAAGACTCTATTATGCTTGGGTCTCTTTTATCCTTAG ATGGAAAGATCAATCGAACGTGTGTTTGCTGAGTGTGCTAACAGAATTATCGCTGAAACTGTGGCCTCTATTGCTGGTATGTCTGAGGAATGTAATGTCAAAGATTCAATTTCTCCTAATGATCACATTGAGTATGTTGCTTCCACTCCTTCCACGACTCCTGAAAACACTGCTAAAAAAAGGAATGATCAAGTGTGTGTTGATCCTAAGCTTAGCGTTGAAGCCAATCCTCCTGCTGAAATCTCAAGAGTAGGGAATTCTGGTGATCTATCAAGTCCACCTGTAAGTCATGCTCGACTTGAGCAAAAAGTGTCTGAAAAAGAAACAAATGTCTCTCCGATGTCTCCTAGTGTTGAGTCTAAAAATTCTACAAAAATCACCTCTGATGAAGATGATGATTGGGGGGGTTTTCTCAGCAATTTTGAGGATGAAGCTCTTGTTAATATAAGAGTTACTAGAGGCTCGACTAAGGGAAAAGGAAAGGCAACTCCTGTAGGGAATGTTGCTTTAGTTCATTTAGATAGCGTGTCCTTCCATTCTGAAGAAGGGGCAAGTCTATGGAAATATGTGGTTAAACATAAGATAGTCGATGAAAAGGAGATCTCTGACAGTACTCAAGAATGCTTGGATCTTATAGATCTTCTCCTTGAAGCAGGGTTAGAAAAGACTCTATTATGCTTGGGTCTCTTTTATCCTTAG MERSIERVFAECANRIIAETVASIAGMSEECNVKDSISPNDHIEYVASTPSTTPENTAKKRNDQVCVDPKLSVEANPPAEISRVGNSGDLSSPPVSHARLEQKVSEKETNVSPMSPSVESKNSTKITSDEDDDWGGFLSNFEDEALVNIRVTRGSTKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLDLIDLLLEAGLEKTLLCLGLFYP
BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.5e-07 Identity = 42/145 (28.97%), Postives = 70/145 (48.28%), Query Frame = 1
BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VI3_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 8.4e-07 Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 1
BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VH7_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 8.4e-07 Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 1
BLAST of ClCG10G006030 vs. TrEMBL
Match: A0A0A0LIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06 Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 1
BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VH9_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06 Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 1
BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659130162|ref|XP_008465030.1| (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo]) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 1
BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659112449|ref|XP_008456227.1| (PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo]) HSP 1 Score: 75.1 bits (183), Expect = 1.8e-10 Identity = 47/174 (27.01%), Postives = 83/174 (47.70%), Query Frame = 1
BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659114868|ref|XP_008457264.1| (PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo]) HSP 1 Score: 74.3 bits (181), Expect = 3.1e-10 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 1
BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659120594|ref|XP_008460264.1| (PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo]) HSP 1 Score: 74.3 bits (181), Expect = 3.1e-10 Identity = 44/151 (29.14%), Postives = 75/151 (49.67%), Query Frame = 1
BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|778730782|ref|XP_011659856.1| (PREDICTED: cell wall protein RBR3-like [Cucumis sativus]) HSP 1 Score: 73.2 bits (178), Expect = 6.9e-10 Identity = 56/231 (24.24%), Postives = 96/231 (41.56%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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