ClCG10G006030 (gene) Watermelon (Charleston Gray)

NameClCG10G006030
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEnvelope-like protein
LocationCG_Chr10 : 8079076 .. 8081178 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGTTTAAGGGCAAAGAAGGAAGTTAAAAATTGTCCCCTCATTGCTCCTTTTAGTATAGTGTTGGAGAGTTGTGTTGTTGGCTCTCATATTGTGTTTAAGGTGGTTGCTTGAGTTTCGCTGATTGTCTCTTATTGTATCTTAACATCTGCTTATATCGTTGGATTTTTTTGCGAATATTTTATTTCTATATCAGGCGATTTTGTGTAGATTTATTCGATCCGATATTCTTTATCGGATCCACTGATTGCCTTTTCGGTCATGCCTTTGATTATTTCCTTACTAAGCTTATCAGTATAAAAGGTGATGATCATTATTTTCTAGAGTTCCCAACTTTTTGTATTGTGTGGAGATTGTTCTTGAGGGTGGCCAAATTCTTCACCGTGAAAAGTGTTTTGTGTTTTATCTTTTTGCTGTTGTGAACCTTTGAGAGAGCGAATTCAAAAGAACATGGCTGTCTTGAGGGAATCATAATGAGTTTTTCACATAAGCTATTCTTGGTCTCAAGGGGAGCCTAAGACCTCATACAGTGAGAAAGAAGTTCTCATTGCTTAGGAGAGCTAAGTGTACAAGTGAAGGGAGTTCATGGAGATTTGGGAGAGATAATCAATTGAAGAAGATTCGCACTAGCACTAACGGAAGCTGAATTGCATCTACACTAATATTGTCAAACATAGGGGGAGCATAAGCATATGAGAGGGAGTCTCACATCTAGGAGGAACCTAAGTGGTTATCTTATTAGCTTGGCTAGTGTCACTGTAGAAGTTGTTACTTTACAGATAAGTACCATGTTGTAATTGTTTAACATTTCAATATTAGTGGATTATCTTTCTCGGGCACACAACCCCCTAGACGTAGGTGTATATCACCAAACTAGATGATATACAGTCCAACACAATCGAACGAAGCACATTAACATAAAACATCATTTTTTTCGTGATTTAGTTGAAAGCAAACAAATTATTCTTGAACATATCAACACGAAAAATCAATTGGCTGACATTTTCACAAAACCCCTGAACACTGCTCAGTTTGAAGGGCTAAGAGCATCCCTAGGCTTATGTACTCTTGAAAAATAGCAATTAATTGAGTGGGCCTGGCAAAAGGAGAAATGACCCATTCGATTTTGAAGAACGCAGGAAGTGATCAGGCATTAACTGACTTAACTACGGTTAGTGAAGGATTAACTAGGTCAGTCTTTCTTTTAATTTCAAATTACTTTGCATTTCAATTTGGCTGGCAATTGATTTTTTGACAGGCTTTGTGTGCACATCGTGGGGTTTCAAAAGTTCCATATGCCTTGTCGTTTTCCCTTGATCGTTCTCTCCTTGCATGTGCCTGTGTGTCCTAAGTCTGTTCATTCTGAAACGATGGTTACTGAAAATATTTTATCGAAGAAATAGTCTAGATCAATCGAACGTGTGTTTGCTGAGTGTGCTAACAGAATTATCGCTGAAACTGTGGCCTCTATTGCTGGTATGTCTGAGGAATGTAATGTCAAAGATTCAATTTCTCCTAATGATCACATTGAGTATGTTGCTTCCACTCCTTCCACGACTCCTGAAAACACTGCTAAAAAAAGGAATGATCAAGTGTGTGTTGATCCTAAGCTTAGCGTTGAAGCCAATCCTCCTGCTGAAATCTCAAGAGTAGGGAATTCTGGTGATCTATCAAGTCCACCTGTAAGTCATGCTCGACTTGAGCAAAAAGTGTCTGAAAAAGAAACAAATGTCTCTCCGATGTCTCCTAGTGTTGAGTCTAAAAATTCTACAAAAATCACCTCTGATGAAGATGATGATTGGGGGGGTTTTCTCAGCAATTTTGAGGATGAAGCTCTTGTTAATATAAGAGTTACTAGAGGCTCGACTAAGGGAAAAGGAAAGGCAACTCCTGTAGGGAATGTTGCTTTAGTTCATTTAGATAGCGTGTCCTTCCATTCTGAAGAAGGGGCAAGTCTATGGAAATATGTGGTTAAACATAAGATAGTCGATGAAAAGGAGATCTCTGACAGTACTCAAGAATGCTTGGATCTTATAGATCTTCTCCTTGAAGCAGGGTTAGAAAAGACTCTATTATGCTTGGGTCTCTTTTATCCTTAG

mRNA sequence

ATGGAAAGATCAATCGAACGTGTGTTTGCTGAGTGTGCTAACAGAATTATCGCTGAAACTGTGGCCTCTATTGCTGGTATGTCTGAGGAATGTAATGTCAAAGATTCAATTTCTCCTAATGATCACATTGAGTATGTTGCTTCCACTCCTTCCACGACTCCTGAAAACACTGCTAAAAAAAGGAATGATCAAGTGTGTGTTGATCCTAAGCTTAGCGTTGAAGCCAATCCTCCTGCTGAAATCTCAAGAGTAGGGAATTCTGGTGATCTATCAAGTCCACCTGTAAGTCATGCTCGACTTGAGCAAAAAGTGTCTGAAAAAGAAACAAATGTCTCTCCGATGTCTCCTAGTGTTGAGTCTAAAAATTCTACAAAAATCACCTCTGATGAAGATGATGATTGGGGGGGTTTTCTCAGCAATTTTGAGGATGAAGCTCTTGTTAATATAAGAGTTACTAGAGGCTCGACTAAGGGAAAAGGAAAGGCAACTCCTGTAGGGAATGTTGCTTTAGTTCATTTAGATAGCGTGTCCTTCCATTCTGAAGAAGGGGCAAGTCTATGGAAATATGTGGTTAAACATAAGATAGTCGATGAAAAGGAGATCTCTGACAGTACTCAAGAATGCTTGGATCTTATAGATCTTCTCCTTGAAGCAGGGTTAGAAAAGACTCTATTATGCTTGGGTCTCTTTTATCCTTAG

Coding sequence (CDS)

ATGGAAAGATCAATCGAACGTGTGTTTGCTGAGTGTGCTAACAGAATTATCGCTGAAACTGTGGCCTCTATTGCTGGTATGTCTGAGGAATGTAATGTCAAAGATTCAATTTCTCCTAATGATCACATTGAGTATGTTGCTTCCACTCCTTCCACGACTCCTGAAAACACTGCTAAAAAAAGGAATGATCAAGTGTGTGTTGATCCTAAGCTTAGCGTTGAAGCCAATCCTCCTGCTGAAATCTCAAGAGTAGGGAATTCTGGTGATCTATCAAGTCCACCTGTAAGTCATGCTCGACTTGAGCAAAAAGTGTCTGAAAAAGAAACAAATGTCTCTCCGATGTCTCCTAGTGTTGAGTCTAAAAATTCTACAAAAATCACCTCTGATGAAGATGATGATTGGGGGGGTTTTCTCAGCAATTTTGAGGATGAAGCTCTTGTTAATATAAGAGTTACTAGAGGCTCGACTAAGGGAAAAGGAAAGGCAACTCCTGTAGGGAATGTTGCTTTAGTTCATTTAGATAGCGTGTCCTTCCATTCTGAAGAAGGGGCAAGTCTATGGAAATATGTGGTTAAACATAAGATAGTCGATGAAAAGGAGATCTCTGACAGTACTCAAGAATGCTTGGATCTTATAGATCTTCTCCTTGAAGCAGGGTTAGAAAAGACTCTATTATGCTTGGGTCTCTTTTATCCTTAG

Protein sequence

MERSIERVFAECANRIIAETVASIAGMSEECNVKDSISPNDHIEYVASTPSTTPENTAKKRNDQVCVDPKLSVEANPPAEISRVGNSGDLSSPPVSHARLEQKVSEKETNVSPMSPSVESKNSTKITSDEDDDWGGFLSNFEDEALVNIRVTRGSTKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLDLIDLLLEAGLEKTLLCLGLFYP
BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.5e-07
Identity = 42/145 (28.97%), Postives = 70/145 (48.28%), Query Frame = 1

Query: 92  SPPVSHARLEQKVSEKETNVSPMSP-----SVESKNSTKITSDEDDDWGGFLSNFEDEAL 151
           +P     R++    +K T ++P +      ++ SK   +I+S + DD         D  L
Sbjct: 263 TPIKRSGRIKTMAQKKSTPITPTTSRRSKVAIPSKKRKEISSSDSDD---------DVEL 322

Query: 152 VNIRVTRGSTKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQ 211
               + R  T GK      GNV    LD++SFHS +    WK+V + ++  E+E+     
Sbjct: 323 DVPDIKRAKTSGKKVP---GNVPDAPLDNISFHSIDNVERWKFVYQRRLALERELGRDAL 382

Query: 212 ECLDLIDLLLEAGLEKTLLCLGLFY 232
           +C +++DL+  AGL KT+  LG  Y
Sbjct: 383 DCKEIMDLIKAAGLLKTVTKLGDCY 395

BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VI3_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.4e-07
Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 1

Query: 92  SPPVSHARLEQKVSEKETNVSPMSPSVESKNSTKITSDEDDDWGGFLSNFEDEALVNIRV 151
           +P     R++    +K T   P++P+   ++   I S +  +    +S+ + +  V + V
Sbjct: 255 TPIKRSGRIKTMAQKKST---PITPATSRRSKVAIPSKKRKE----ISSSDSDKDVELDV 314

Query: 152 -TRGSTKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLD 211
            T    K  GK  P GNV    LD++SFHS      WKYV + ++  E+E+     +C +
Sbjct: 315 STSKKAKTSGKKVP-GNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVERELGRDALDCKE 374

Query: 212 LIDLLLEAGLEKTLLCLGLFY 232
           ++DL+  AGL KT+  LG  Y
Sbjct: 375 IMDLIKAAGLLKTVSKLGDCY 387

BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VH7_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.4e-07
Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 1

Query: 92  SPPVSHARLEQKVSEKETNVSPMSPSVESKNSTKITSDEDDDWGGFLSNFEDEALVNIRV 151
           +P     R++    +K T   P++P+   ++   I S +  +    +S+ + +  V + V
Sbjct: 255 TPIKRSGRIKTMAQKKST---PITPATSRRSKVAIPSKKRKE----ISSSDSDKDVELDV 314

Query: 152 -TRGSTKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLD 211
            T    K  GK  P GNV    LD++SFHS      WKYV + ++  E+E+     +C +
Sbjct: 315 STSKKAKTSGKKVP-GNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVERELGRDALDCKE 374

Query: 212 LIDLLLEAGLEKTLLCLGLFY 232
           ++DL+  AGL KT+  LG  Y
Sbjct: 375 IMDLIKAAGLLKTVSKLGDCY 387

BLAST of ClCG10G006030 vs. TrEMBL
Match: A0A0A0LIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 1

Query: 158 GKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLDLIDLLLE 217
           GK K +P   +  V +D +SFH EE A  WKYV++ +I DE  IS+     + + +L+++
Sbjct: 75  GKRKLSP--KIPFVSIDGISFHHEESAQRWKYVIQRRIDDEVNISNKHHSYISVTELIIK 134

Query: 218 AGLEKTLLCLGLFY 232
            GL KT+  +G FY
Sbjct: 135 VGLCKTIANIGPFY 146

BLAST of ClCG10G006030 vs. TrEMBL
Match: Q84VH9_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 1

Query: 92  SPPVSHARLEQKVSEKETNVSPMSP-----SVESKNSTKITSDEDDDWGGFLSNFEDEAL 151
           +P     R++    +K T ++P +      ++ SK   +I+S + DD         D  L
Sbjct: 241 TPITRSGRIKTIAQKKSTPITPTTSRWSKVAIPSKKRKEISSSDSDD---------DVEL 300

Query: 152 VNIRVTRGSTKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQ 211
               + R   K  GK  P GNV    LD++SFHS      WK+V + ++  E+E+     
Sbjct: 301 DVPDIKRA--KKSGKKVP-GNVPDAPLDNISFHSIGNVERWKFVYQRRLALERELGRDAL 360

Query: 212 ECLDLIDLLLEAGLEKTLLCLGLFY 232
           +C +++DL+  AGL KT+  LG  Y
Sbjct: 361 DCKEIMDLIKAAGLLKTVTKLGDCY 373

BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659130162|ref|XP_008465030.1| (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo])

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 1

Query: 155 STKGKGKATPVGNVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLDLIDL 214
           +TK   K  P  NV  V +D +SFH EE    WK+V++ +IVDE  ISD  Q C+ ++DL
Sbjct: 224 TTKTDRKKIPA-NVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISDKHQSCMSIMDL 283

Query: 215 LLEAGLEKTLLCLGLFYP 233
           + +AGLEKT+  +G FYP
Sbjct: 284 IHKAGLEKTISDVGPFYP 300

BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659112449|ref|XP_008456227.1| (PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-10
Identity = 47/174 (27.01%), Postives = 83/174 (47.70%), Query Frame = 1

Query: 65  VCVDPKLSVEANPPAEISRVGNSGDLSSPPVSHARLEQKVSEKETNVSPMSPSVESKNST 124
           VC  P +S+   P    + V     L + P   +   +  ++ ++N + + PS  +  + 
Sbjct: 65  VCSPPSVSLAFAPDDVHAYV-----LDNVPSDVSTTSEGQTDVQSNENEVDPSNPAVCAD 124

Query: 125 KITSDEDDDWGGFLSNFEDEALVNIRVTRGSTKGKGKATPVG------NVALVHLDSVSF 184
           ++ ++ DD      S+ E    +     +     + K T +G      N+  V +D + F
Sbjct: 125 EVPTNADDSLAVPPSSSEVPVALKPVKRKSQQNRRNKTTKIGRKKVPPNIPSVPIDGILF 184

Query: 185 HSEEGASLWKYVVKHKIVDEKEISDSTQECLDLIDLLLEAGLEKTLLCLGLFYP 233
           H EE    WK+VV+  + DE  +SD  Q C+ ++DL+  AGL KT+L +G FYP
Sbjct: 185 HHEENVQCWKFVVQRWLADEVNVSDKHQSCMSIMDLIERAGLAKTILNVGPFYP 233

BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659114868|ref|XP_008457264.1| (PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 3.1e-10
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 1

Query: 167 NVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEISDSTQECLDLIDLLLEAGLEKTLLC 226
           NV  V +D +SFH EE    WK+V++ +IVDE  ISD  Q C+ ++DL+ +AGLEKT+  
Sbjct: 189 NVPSVPIDGISFHHEESVQCWKFVMQRRIVDEVNISDKHQSCMSIMDLIHKAGLEKTISN 248

Query: 227 LGLFYP 233
           +G FYP
Sbjct: 249 VGPFYP 254

BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|659120594|ref|XP_008460264.1| (PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 3.1e-10
Identity = 44/151 (29.14%), Postives = 75/151 (49.67%), Query Frame = 1

Query: 88  GDLSSPPVSHARLEQKVSEKETNVSPMSPSVESKNSTKITSDEDDDWGGFLSNFEDEALV 147
           G++S  PV H        E E  V P  P + ++   ++  ++D++     ++ +  A  
Sbjct: 180 GNISGAPVRHPNDR----EVEDEVEPQHPDIGTE---EVPLNDDNNLVVPPASADIPAAS 239

Query: 148 NIRVTRGSTKGKGKATPVG------NVALVHLDSVSFHSEEGASLWKYVVKHKIVDEKEI 207
           N    +   K +   T  G      N+  + +D +SFH EE    WK+V++ +I DE  +
Sbjct: 240 NPAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEVNV 299

Query: 208 SDSTQECLDLIDLLLEAGLEKTLLCLGLFYP 233
           SD  Q C+ ++DL+  AGL KT+  +G FYP
Sbjct: 300 SDKHQSCMSIMDLIERAGLTKTISNVGPFYP 323

BLAST of ClCG10G006030 vs. NCBI nr
Match: gi|778730782|ref|XP_011659856.1| (PREDICTED: cell wall protein RBR3-like [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 6.9e-10
Identity = 56/231 (24.24%), Postives = 96/231 (41.56%), Query Frame = 1

Query: 19  ETVASIAGMSEECNVKDSISPNDHIEYVASTPSTTPE--------NTAKKRNDQVCVDPK 78
           + V +    S   +++D I   + +     + S+ PE        N +K++      D  
Sbjct: 42  QDVPTTMAASASSDLQDQIPLTELLRKKTQSRSSVPEGVSKSPKLNVSKEKGKAPMSDSS 101

Query: 79  LSVEANPPAEISRVGNSGDLSSP---------PVSHARLEQKVSEKETNVSPMSPSVESK 138
               ++    +S   + G  SS          P S A  +   S +     P  PS  +K
Sbjct: 102 TDASSSTSVPMSNRQSFGSSSSHKLSDAPTQVPPSPAPAQPYSSSQPAAAQPAPPSSATK 161

Query: 139 NSTKITSDEDDDWGGFLSNFEDEALVNIRVTRGSTKGKGKATPVGNVALVHLDSVSFHSE 198
            + K +S                    +   RG T   G+     N+  V +D +SFH E
Sbjct: 162 EADKTSSPPPQ--------------TKVPEPRGVTIKTGRRCLPRNIPSVPIDGISFHHE 221

Query: 199 EGASLWKYVVKHKIVDEKEISDSTQECLDLIDLLLEAGLEKTLLCLGLFYP 233
           E A  W++VV+ ++ DE  IS   Q C+ +++L+ +AGL +T+L +G FYP
Sbjct: 222 ENAQCWRFVVQTRLADEVNISYKHQSCVAIMELINQAGLSRTILNVGPFYP 258

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84VH5_SOYBN6.5e-0728.97Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Q84VI3_SOYBN8.4e-0729.79Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Q84VH7_SOYBN8.4e-0729.79Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
A0A0A0LIG9_CUCSA2.5e-0639.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1[more]
Q84VH9_SOYBN3.2e-0629.66Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659130162|ref|XP_008465030.1|1.4e-1047.44PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo][more]
gi|659112449|ref|XP_008456227.1|1.8e-1027.01PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo][more]
gi|659114868|ref|XP_008457264.1|3.1e-1050.00PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo][more]
gi|659120594|ref|XP_008460264.1|3.1e-1029.14PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo... [more]
gi|778730782|ref|XP_011659856.1|6.9e-1024.24PREDICTED: cell wall protein RBR3-like [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G006030.1ClCG10G006030.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None